2023-01-09T15:06:22,023 Created temporary directory: /tmp/pip-ephem-wheel-cache-124dtrq7 2023-01-09T15:06:22,025 Created temporary directory: /tmp/pip-build-tracker-b_etr0s1 2023-01-09T15:06:22,026 Initialized build tracking at /tmp/pip-build-tracker-b_etr0s1 2023-01-09T15:06:22,026 Created build tracker: /tmp/pip-build-tracker-b_etr0s1 2023-01-09T15:06:22,026 Entered build tracker: /tmp/pip-build-tracker-b_etr0s1 2023-01-09T15:06:22,027 Created temporary directory: /tmp/pip-wheel-033pa9y0 2023-01-09T15:06:22,030 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-09T15:06:22,032 Created temporary directory: /tmp/pip-ephem-wheel-cache-behrcj1o 2023-01-09T15:06:22,058 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-09T15:06:22,062 2 location(s) to search for versions of emzed: 2023-01-09T15:06:22,062 * https://pypi.org/simple/emzed/ 2023-01-09T15:06:22,062 * https://www.piwheels.org/simple/emzed/ 2023-01-09T15:06:22,062 Fetching project page and analyzing links: https://pypi.org/simple/emzed/ 2023-01-09T15:06:22,062 Getting page https://pypi.org/simple/emzed/ 2023-01-09T15:06:22,064 Found index url https://pypi.org/simple 2023-01-09T15:06:22,117 Fetched page https://pypi.org/simple/emzed/ as application/vnd.pypi.simple.v1+json 2023-01-09T15:06:22,138 Found link https://files.pythonhosted.org/packages/ac/e0/efad3689bc40c7ecbc85d9fd30595e6458055b5f5e627bf5ce261b79b8a6/emzed-2.10.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.0 2023-01-09T15:06:22,139 Found link https://files.pythonhosted.org/packages/48/b7/ed17ede3fc122860cc84a32a3f3eee8ec52399eba7765f9fefbcd959f548/emzed-2.10.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.1 2023-01-09T15:06:22,139 Found link https://files.pythonhosted.org/packages/c5/e2/c579987fdbf59648bb5ac4d4fded43f9b87f9b78b82582de8bba547db574/emzed-2.10.2.zip (from https://pypi.org/simple/emzed/), version: 2.10.2 2023-01-09T15:06:22,139 Found link https://files.pythonhosted.org/packages/f1/9a/147fc2ac5a015ac057452d4372a7d1d041f70410338e7ce68ccccbb9148c/emzed-2.11.1.win-amd64.zip (from https://pypi.org/simple/emzed/), version: 2.11.1.win-amd64 2023-01-09T15:06:22,139 Found link https://files.pythonhosted.org/packages/e6/53/e7ccf9447a21722eb0b73153b73917b5a2ecc6230a8fb60a60e81fcbfbb0/emzed-2.11.1.zip (from https://pypi.org/simple/emzed/), version: 2.11.1 2023-01-09T15:06:22,140 Found link 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https://files.pythonhosted.org/packages/4d/c9/49662a6bb31a8d71369e4d0b636b68ed99156ba940b0d86212710aca485c/emzed-2.13.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.1 2023-01-09T15:06:22,145 Found link https://files.pythonhosted.org/packages/93/4f/ec3c9240434a037217f9e9817678b2125c1a741ca19e7b49fe12ffac528c/emzed-2.13.2.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.2 2023-01-09T15:06:22,145 Found link https://files.pythonhosted.org/packages/ec/b0/48b21b691973e6d9851ef741423619ae72c0bde96917f5d97116f3328b83/emzed-2.13.3.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.3 2023-01-09T15:06:22,146 Found link https://files.pythonhosted.org/packages/b8/3f/83bbc74a085eabd252ce58c821aeb9122790a07c11e382ae43eca9177ebd/emzed-2.14.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.14.0 2023-01-09T15:06:22,146 Found link https://files.pythonhosted.org/packages/db/a3/52cae75878dc5132237d4d4de469839ecb4041a3b7e63815f90a6c93a7cf/emzed-2.14.1.tar.gz (from 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https://www.piwheels.org/simple/emzed/emzed-2.11.1-py3-none-any.whl#sha256=c3e7939f25dc51cf36a6c74da5da37fd43de8b46600793dbf2faee65442a449a (from https://www.piwheels.org/simple/emzed/) 2023-01-09T15:06:22,403 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.2-py3-none-any.whl#sha256=9ed9bbbfa797edad31f5e430d871121c9b71ba4d5f0e242a2d78c31ff05c7895 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T15:06:22,404 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.1-py3-none-any.whl#sha256=4e6f93fddc7e3db9b310df54491deca02efb5fad03ad72cced63702e014ad419 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T15:06:22,404 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.0-py3-none-any.whl#sha256=765232d1a671848379b1cbcea69506fedb5aab108760664426dc27204e46eeaf (from https://www.piwheels.org/simple/emzed/) 2023-01-09T15:06:22,404 Skipping link: not a file: https://www.piwheels.org/simple/emzed/ 2023-01-09T15:06:22,404 Skipping link: not a file: https://pypi.org/simple/emzed/ 2023-01-09T15:06:22,439 Given no hashes to check 1 links for project 'emzed': discarding no candidates 2023-01-09T15:06:22,457 Collecting emzed==3.0.0a5 2023-01-09T15:06:22,459 Created temporary directory: /tmp/pip-unpack-xbtxdqu4 2023-01-09T15:06:22,504 Downloading emzed-3.0.0a5.tar.gz (572 kB) 2023-01-09T15:06:23,096 Added emzed==3.0.0a5 from https://files.pythonhosted.org/packages/6c/37/c6d18caadc1db46b30f45b821767cc5663471c69e76c8c0405eea5802d6c/emzed-3.0.0a5.tar.gz to build tracker '/tmp/pip-build-tracker-b_etr0s1' 2023-01-09T15:06:23,097 Running setup.py (path:/tmp/pip-wheel-033pa9y0/emzed_3a5da1ce1aae4962823f4fafa07e109d/setup.py) egg_info for package emzed 2023-01-09T15:06:23,098 Created temporary directory: /tmp/pip-pip-egg-info-tjnjrc23 2023-01-09T15:06:23,098 Preparing metadata (setup.py): started 2023-01-09T15:06:23,099 Running command python setup.py egg_info 2023-01-09T15:06:24,373 running egg_info 2023-01-09T15:06:24,375 creating /tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info 2023-01-09T15:06:24,402 writing /tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/PKG-INFO 2023-01-09T15:06:24,405 writing dependency_links to /tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/dependency_links.txt 2023-01-09T15:06:24,407 writing requirements to /tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/requires.txt 2023-01-09T15:06:24,408 writing top-level names to /tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/top_level.txt 2023-01-09T15:06:24,409 writing manifest file '/tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/SOURCES.txt' 2023-01-09T15:06:24,510 reading manifest file '/tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/SOURCES.txt' 2023-01-09T15:06:24,512 reading manifest template 'MANIFEST.in' 2023-01-09T15:06:24,649 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T15:06:24,650 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T15:06:24,650 adding license file 'LICENSE' 2023-01-09T15:06:24,657 writing manifest file '/tmp/pip-pip-egg-info-tjnjrc23/emzed.egg-info/SOURCES.txt' 2023-01-09T15:06:24,787 Preparing metadata (setup.py): finished with status 'done' 2023-01-09T15:06:24,793 Source in /tmp/pip-wheel-033pa9y0/emzed_3a5da1ce1aae4962823f4fafa07e109d has version 3.0.0a5, which satisfies requirement emzed==3.0.0a5 from https://files.pythonhosted.org/packages/6c/37/c6d18caadc1db46b30f45b821767cc5663471c69e76c8c0405eea5802d6c/emzed-3.0.0a5.tar.gz 2023-01-09T15:06:24,793 Removed emzed==3.0.0a5 from https://files.pythonhosted.org/packages/6c/37/c6d18caadc1db46b30f45b821767cc5663471c69e76c8c0405eea5802d6c/emzed-3.0.0a5.tar.gz from build tracker '/tmp/pip-build-tracker-b_etr0s1' 2023-01-09T15:06:24,798 Created temporary directory: /tmp/pip-unpack-le3ve2_y 2023-01-09T15:06:24,799 Building wheels for collected packages: emzed 2023-01-09T15:06:24,803 Created temporary directory: /tmp/pip-wheel-fnprmnmv 2023-01-09T15:06:24,804 Building wheel for emzed (setup.py): started 2023-01-09T15:06:24,805 Destination directory: /tmp/pip-wheel-fnprmnmv 2023-01-09T15:06:24,805 Running command python setup.py bdist_wheel 2023-01-09T15:06:26,014 running bdist_wheel 2023-01-09T15:06:26,094 running build 2023-01-09T15:06:26,094 running build_py 2023-01-09T15:06:26,123 creating build 2023-01-09T15:06:26,124 creating build/lib.linux-armv7l-cpython-39 2023-01-09T15:06:26,124 creating build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,125 copying src/emzed/io.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,128 copying src/emzed/db.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,130 copying src/emzed/check_pyopenms.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,132 copying src/emzed/__main__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,133 copying src/emzed/ext.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,135 copying src/emzed/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,137 copying src/emzed/gui.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T15:06:26,139 creating build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T15:06:26,140 copying src/emzed/ms2/sirius_export.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T15:06:26,142 copying src/emzed/ms2/attach_ms2_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T15:06:26,145 copying src/emzed/ms2/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T15:06:26,146 copying src/emzed/ms2/merge_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T15:06:26,149 creating build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T15:06:26,149 copying src/emzed/ms_data/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T15:06:26,151 copying src/emzed/ms_data/peak_map.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T15:06:26,154 copying src/emzed/ms_data/peak_map_hasher.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T15:06:26,156 creating build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T15:06:26,157 copying src/emzed/r_connect/patched_pyper.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T15:06:26,159 copying src/emzed/r_connect/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T15:06:26,161 copying src/emzed/r_connect/r_executor.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T15:06:26,164 creating build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,165 copying src/emzed/chemistry/molecular_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,167 copying src/emzed/chemistry/pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,169 copying src/emzed/chemistry/fetch_elements_pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,171 copying src/emzed/chemistry/mass.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,173 copying src/emzed/chemistry/elements.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,177 copying src/emzed/chemistry/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,179 copying src/emzed/chemistry/isotope_generator.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,181 copying src/emzed/chemistry/abundance.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,183 copying src/emzed/chemistry/formula_parser.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,185 copying src/emzed/chemistry/adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,187 copying src/emzed/chemistry/fit_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,190 creating build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,190 copying src/emzed/core/exceptions.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,192 copying src/emzed/core/hashes.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,194 copying src/emzed/core/multiprocessing.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,196 copying src/emzed/core/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,198 copying src/emzed/core/db_backed_dictionary.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,200 copying src/emzed/core/db_backed_model.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T15:06:26,202 creating build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T15:06:26,203 copying src/emzed/targeted/solution_space.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T15:06:26,205 copying src/emzed/targeted/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T15:06:26,207 creating build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,208 copying src/emzed/align/sample_alignment.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,210 copying src/emzed/align/mz_align_routines.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,212 copying src/emzed/align/rt_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,215 copying src/emzed/align/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,216 copying src/emzed/align/mz_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T15:06:26,219 creating build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T15:06:26,220 copying src/emzed/peak_picking/extract_chromatograms.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T15:06:26,222 copying src/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T15:06:26,224 copying src/emzed/peak_picking/_run_feature_finder_metabo.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T15:06:26,227 copying src/emzed/peak_picking/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T15:06:26,229 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T15:06:26,230 copying src/emzed/pyopenms/pyopenms_client.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T15:06:26,232 copying src/emzed/pyopenms/object_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T15:06:26,233 copying src/emzed/pyopenms/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T15:06:26,236 copying src/emzed/pyopenms/optimizations.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T15:06:26,238 creating build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T15:06:26,239 copying src/emzed/config/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T15:06:26,241 copying src/emzed/config/config.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T15:06:26,243 creating build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T15:06:26,244 copying src/emzed/annotate/annotate_adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T15:06:26,247 copying src/emzed/annotate/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T15:06:26,249 creating build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,250 copying src/emzed/utils/download.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,252 copying src/emzed/utils/has_emzed_gui.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,253 copying src/emzed/utils/temp_file_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,255 copying src/emzed/utils/lookup.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,256 copying src/emzed/utils/functools.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,258 copying src/emzed/utils/align_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,260 copying src/emzed/utils/busy_indicator.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,262 copying src/emzed/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,263 copying src/emzed/utils/sqlite.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T15:06:26,266 creating build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T15:06:26,267 copying src/emzed/quantification/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T15:06:26,269 copying src/emzed/quantification/peak_integration.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T15:06:26,273 creating build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,274 copying src/emzed/table/col_types.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,276 copying src/emzed/table/prepare_table_cell_content.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,278 copying src/emzed/table/table_utils.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,280 copying src/emzed/table/load_into_from.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,282 copying src/emzed/table/extract_columns_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,283 copying src/emzed/table/delete_rows.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,285 copying src/emzed/table/collapse.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,287 copying src/emzed/table/sort_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,289 copying src/emzed/table/select_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,290 copying src/emzed/table/replace_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,293 copying src/emzed/table/group_by.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,295 copying src/emzed/table/join.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,297 copying src/emzed/table/base_models.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,300 copying src/emzed/table/add_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,302 copying src/emzed/table/filter_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,303 copying src/emzed/table/expressions.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,306 copying src/emzed/table/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,308 copying src/emzed/table/table.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,312 copying src/emzed/table/full_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,314 copying src/emzed/table/immutable_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,317 copying src/emzed/table/row_class.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,318 copying src/emzed/table/table_migrations.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T15:06:26,320 creating build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T15:06:26,321 copying src/emzed/optimized/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T15:06:26,324 creating build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,325 copying src/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,326 copying src/emzed/quantification/peak_shape_models/savgol_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,328 copying src/emzed/quantification/peak_shape_models/base.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,330 copying src/emzed/quantification/peak_shape_models/simplified_emg.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,332 copying src/emzed/quantification/peak_shape_models/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,334 copying src/emzed/quantification/peak_shape_models/no_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,335 copying src/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T15:06:26,337 running egg_info 2023-01-09T15:06:26,391 writing src/emzed.egg-info/PKG-INFO 2023-01-09T15:06:26,393 writing dependency_links to src/emzed.egg-info/dependency_links.txt 2023-01-09T15:06:26,395 writing requirements to src/emzed.egg-info/requires.txt 2023-01-09T15:06:26,396 writing top-level names to src/emzed.egg-info/top_level.txt 2023-01-09T15:06:26,437 reading manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T15:06:26,442 reading manifest template 'MANIFEST.in' 2023-01-09T15:06:26,572 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T15:06:26,574 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T15:06:26,574 adding license file 'LICENSE' 2023-01-09T15:06:26,583 writing manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T15:06:26,587 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib' as data is deprecated, please list it in `packages`. 2023-01-09T15:06:26,587 !! 2023-01-09T15:06:26,587 ############################ 2023-01-09T15:06:26,587 # Package would be ignored # 2023-01-09T15:06:26,587 ############################ 2023-01-09T15:06:26,588 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib' as an importable package, 2023-01-09T15:06:26,588 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T15:06:26,588 'emzed.pyopenms._pyopenms_venv.lib' has been automatically added to the distribution only 2023-01-09T15:06:26,588 because it may contain data files, but this behavior is likely to change 2023-01-09T15:06:26,588 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T15:06:26,588 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib' is included as a package by using 2023-01-09T15:06:26,588 the `packages` configuration field or the proper discovery methods 2023-01-09T15:06:26,589 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T15:06:26,589 instead of `find_packages(...)`/`find:`). 2023-01-09T15:06:26,589 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T15:06:26,589 documentation page. 2023-01-09T15:06:26,589 !! 2023-01-09T15:06:26,590 check.warn(importable) 2023-01-09T15:06:26,590 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib64' as data is deprecated, please list it in `packages`. 2023-01-09T15:06:26,590 !! 2023-01-09T15:06:26,590 ############################ 2023-01-09T15:06:26,590 # Package would be ignored # 2023-01-09T15:06:26,590 ############################ 2023-01-09T15:06:26,591 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib64' as an importable package, 2023-01-09T15:06:26,591 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T15:06:26,591 'emzed.pyopenms._pyopenms_venv.lib64' has been automatically added to the distribution only 2023-01-09T15:06:26,591 because it may contain data files, but this behavior is likely to change 2023-01-09T15:06:26,591 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T15:06:26,591 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib64' is included as a package by using 2023-01-09T15:06:26,591 the `packages` configuration field or the proper discovery methods 2023-01-09T15:06:26,591 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T15:06:26,592 instead of `find_packages(...)`/`find:`). 2023-01-09T15:06:26,592 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T15:06:26,592 documentation page. 2023-01-09T15:06:26,592 !! 2023-01-09T15:06:26,593 check.warn(importable) 2023-01-09T15:06:26,600 copying src/emzed/chemistry/Elements.xml -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,604 copying src/emzed/chemistry/elements_pubchem.json -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T15:06:26,609 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv 2023-01-09T15:06:26,609 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T15:06:26,610 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T15:06:26,610 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T15:06:26,611 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T15:06:26,612 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T15:06:26,612 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T15:06:26,613 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,614 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,617 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,620 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,622 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,624 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,678 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,679 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,681 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,683 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,684 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,687 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,690 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,693 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,697 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T15:06:26,697 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T15:06:26,698 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T15:06:26,700 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T15:06:26,700 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T15:06:26,701 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T15:06:26,702 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T15:06:26,702 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T15:06:26,703 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T15:06:26,704 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,705 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,708 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,710 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,713 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,715 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:26,769 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,770 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,773 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:26,775 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,776 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,779 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,783 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,787 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:26,790 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T15:06:26,790 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T15:06:26,792 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T15:06:26,794 copying src/emzed/optimized/formula_fit.c -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T15:06:26,813 running build_ext 2023-01-09T15:06:27,066 building 'emzed.optimized.formula_fit' extension 2023-01-09T15:06:27,067 creating build/temp.linux-armv7l-cpython-39 2023-01-09T15:06:27,067 creating build/temp.linux-armv7l-cpython-39/src 2023-01-09T15:06:27,068 creating build/temp.linux-armv7l-cpython-39/src/emzed 2023-01-09T15:06:27,069 creating build/temp.linux-armv7l-cpython-39/src/emzed/optimized 2023-01-09T15:06:27,070 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -c src/emzed/optimized/formula_fit.c -o build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o 2023-01-09T15:06:27,533 src/emzed/optimized/formula_fit.c: In function ‘__Pyx_ParseOptionalKeywords’: 2023-01-09T15:06:27,536 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,536 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,536 | ^ 2023-01-09T15:06:27,537 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,537 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,537 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,537 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,537 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,538 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,540 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,540 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,540 | ^ 2023-01-09T15:06:27,541 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,541 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,541 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,541 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T15:06:27,541 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T15:06:27,542 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,543 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,544 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,544 | ^ 2023-01-09T15:06:27,544 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,544 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,544 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,545 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,545 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,545 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,547 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,547 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,547 | ^ 2023-01-09T15:06:27,548 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,548 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,548 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,548 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,548 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,548 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,550 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,551 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,551 | ^ 2023-01-09T15:06:27,551 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,551 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,551 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,551 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T15:06:27,552 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T15:06:27,552 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,554 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,554 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,554 | ^ 2023-01-09T15:06:27,554 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,555 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,555 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,555 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,555 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,555 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,558 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,559 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,559 | ^ 2023-01-09T15:06:27,559 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,559 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,559 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,560 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,560 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,560 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,562 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,562 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,562 | ^ 2023-01-09T15:06:27,562 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,563 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,563 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,563 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T15:06:27,563 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T15:06:27,563 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,565 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,566 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,566 | ^ 2023-01-09T15:06:27,566 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,566 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,566 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,566 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,567 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,567 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,569 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,569 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,569 | ^ 2023-01-09T15:06:27,569 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,570 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,570 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,570 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,570 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,570 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,572 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,572 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,573 | ^ 2023-01-09T15:06:27,573 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,573 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,573 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,573 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T15:06:27,573 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T15:06:27,574 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:27,576 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T15:06:27,576 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T15:06:27,576 | ^ 2023-01-09T15:06:27,577 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T15:06:27,577 from /usr/include/python3.9/Python.h:97, 2023-01-09T15:06:27,577 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T15:06:27,577 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T15:06:27,577 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T15:06:27,577 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T15:06:32,732 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so 2023-01-09T15:06:32,851 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-09T15:06:32,851 warnings.warn( 2023-01-09T15:06:32,881 installing to build/bdist.linux-armv7l/wheel 2023-01-09T15:06:32,881 running install 2023-01-09T15:06:32,907 running install_lib 2023-01-09T15:06:32,937 creating build/bdist.linux-armv7l 2023-01-09T15:06:32,938 creating build/bdist.linux-armv7l/wheel 2023-01-09T15:06:32,940 creating build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:32,941 creating build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T15:06:32,943 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/sirius_export.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T15:06:32,945 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/attach_ms2_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T15:06:32,948 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T15:06:32,950 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/merge_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T15:06:32,953 creating build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T15:06:32,954 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T15:06:32,956 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T15:06:32,960 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map_hasher.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T15:06:32,962 copying build/lib.linux-armv7l-cpython-39/emzed/io.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:32,965 copying build/lib.linux-armv7l-cpython-39/emzed/db.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:32,967 creating build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T15:06:32,968 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/patched_pyper.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T15:06:32,971 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T15:06:32,973 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/r_executor.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T15:06:32,976 creating build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,977 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements_pubchem.json -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,982 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/molecular_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,984 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,987 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fetch_elements_pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,989 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/mass.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,991 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,993 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,995 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/isotope_generator.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:32,998 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/abundance.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:33,000 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/formula_parser.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:33,002 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/Elements.xml -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:33,006 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/adducts.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:33,007 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fit_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T15:06:33,010 creating build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,011 copying build/lib.linux-armv7l-cpython-39/emzed/core/exceptions.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,013 copying build/lib.linux-armv7l-cpython-39/emzed/core/hashes.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,014 copying build/lib.linux-armv7l-cpython-39/emzed/core/multiprocessing.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,016 copying build/lib.linux-armv7l-cpython-39/emzed/core/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,018 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_dictionary.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,020 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_model.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T15:06:33,022 copying build/lib.linux-armv7l-cpython-39/emzed/check_pyopenms.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:33,024 creating build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T15:06:33,025 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/solution_space.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T15:06:33,027 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T15:06:33,030 creating build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,030 copying build/lib.linux-armv7l-cpython-39/emzed/align/sample_alignment.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,032 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align_routines.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,035 copying build/lib.linux-armv7l-cpython-39/emzed/align/rt_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,037 copying build/lib.linux-armv7l-cpython-39/emzed/align/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,039 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T15:06:33,041 copying build/lib.linux-armv7l-cpython-39/emzed/__main__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:33,043 creating build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T15:06:33,044 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/extract_chromatograms.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T15:06:33,046 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T15:06:33,049 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T15:06:33,051 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T15:06:33,053 copying build/lib.linux-armv7l-cpython-39/emzed/ext.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:33,056 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T15:06:33,056 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/pyopenms_client.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T15:06:33,059 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/object_handling.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T15:06:33,061 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv 2023-01-09T15:06:33,062 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T15:06:33,064 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T15:06:33,065 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T15:06:33,067 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T15:06:33,068 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T15:06:33,069 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T15:06:33,072 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T15:06:33,073 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T15:06:33,075 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T15:06:33,076 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,077 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,080 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,133 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,136 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,138 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,140 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,141 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,143 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,146 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,146 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,149 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,152 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,155 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,158 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T15:06:33,159 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T15:06:33,161 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T15:06:33,162 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T15:06:33,164 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T15:06:33,165 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T15:06:33,168 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T15:06:33,169 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T15:06:33,170 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T15:06:33,172 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,173 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,175 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,229 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,232 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,234 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T15:06:33,236 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,237 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,239 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T15:06:33,242 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,243 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,245 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,248 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,251 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T15:06:33,254 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T15:06:33,257 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/optimizations.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T15:06:33,261 creating build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T15:06:33,262 copying build/lib.linux-armv7l-cpython-39/emzed/config/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T15:06:33,264 copying build/lib.linux-armv7l-cpython-39/emzed/config/config.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T15:06:33,267 creating build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T15:06:33,268 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/annotate_adducts.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T15:06:33,272 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T15:06:33,274 copying build/lib.linux-armv7l-cpython-39/emzed/__init__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:33,277 creating build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,278 copying build/lib.linux-armv7l-cpython-39/emzed/utils/download.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,281 copying build/lib.linux-armv7l-cpython-39/emzed/utils/has_emzed_gui.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,283 copying build/lib.linux-armv7l-cpython-39/emzed/utils/temp_file_handling.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,285 copying build/lib.linux-armv7l-cpython-39/emzed/utils/lookup.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,288 copying build/lib.linux-armv7l-cpython-39/emzed/utils/functools.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,303 copying build/lib.linux-armv7l-cpython-39/emzed/utils/align_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,305 copying build/lib.linux-armv7l-cpython-39/emzed/utils/busy_indicator.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,308 copying build/lib.linux-armv7l-cpython-39/emzed/utils/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,323 copying build/lib.linux-armv7l-cpython-39/emzed/utils/sqlite.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T15:06:33,326 copying build/lib.linux-armv7l-cpython-39/emzed/gui.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T15:06:33,329 creating build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T15:06:33,330 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T15:06:33,333 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_integration.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T15:06:33,337 creating build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,338 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,340 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/savgol_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,343 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/base.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,345 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/simplified_emg.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,348 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,350 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/no_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,353 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T15:06:33,357 creating build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,358 copying build/lib.linux-armv7l-cpython-39/emzed/table/col_types.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,360 copying build/lib.linux-armv7l-cpython-39/emzed/table/prepare_table_cell_content.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,363 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_utils.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,366 copying build/lib.linux-armv7l-cpython-39/emzed/table/load_into_from.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,368 copying build/lib.linux-armv7l-cpython-39/emzed/table/extract_columns_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,371 copying build/lib.linux-armv7l-cpython-39/emzed/table/delete_rows.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,373 copying build/lib.linux-armv7l-cpython-39/emzed/table/collapse.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,375 copying build/lib.linux-armv7l-cpython-39/emzed/table/sort_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,378 copying build/lib.linux-armv7l-cpython-39/emzed/table/select_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,380 copying build/lib.linux-armv7l-cpython-39/emzed/table/replace_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,383 copying build/lib.linux-armv7l-cpython-39/emzed/table/group_by.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,386 copying build/lib.linux-armv7l-cpython-39/emzed/table/join.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,389 copying build/lib.linux-armv7l-cpython-39/emzed/table/base_models.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,393 copying build/lib.linux-armv7l-cpython-39/emzed/table/add_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,395 copying build/lib.linux-armv7l-cpython-39/emzed/table/filter_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,398 copying build/lib.linux-armv7l-cpython-39/emzed/table/expressions.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,402 copying build/lib.linux-armv7l-cpython-39/emzed/table/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,404 copying build/lib.linux-armv7l-cpython-39/emzed/table/table.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,410 copying build/lib.linux-armv7l-cpython-39/emzed/table/full_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,413 copying build/lib.linux-armv7l-cpython-39/emzed/table/immutable_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,416 copying build/lib.linux-armv7l-cpython-39/emzed/table/row_class.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,419 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_migrations.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T15:06:33,423 creating build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T15:06:33,424 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T15:06:33,436 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.c -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T15:06:33,447 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T15:06:33,449 running install_egg_info 2023-01-09T15:06:33,479 Copying src/emzed.egg-info to build/bdist.linux-armv7l/wheel/emzed-3.0.0a5-py3.9.egg-info 2023-01-09T15:06:33,493 running install_scripts 2023-01-09T15:06:33,543 Traceback (most recent call last): 2023-01-09T15:06:33,543 File "", line 1, in 2023-01-09T15:06:33,544 ModuleNotFoundError: No module named 'emzed' 2023-01-09T15:06:33,579 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-01-09T15:06:33,584 creating build/bdist.linux-armv7l/wheel/emzed-3.0.0a5.dist-info/WHEEL 2023-01-09T15:06:33,587 creating '/tmp/pip-wheel-fnprmnmv/emzed-3.0.0a5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-09T15:06:33,590 adding 'emzed/__init__.py' 2023-01-09T15:06:33,591 adding 'emzed/__main__.py' 2023-01-09T15:06:33,593 adding 'emzed/check_pyopenms.py' 2023-01-09T15:06:33,594 adding 'emzed/db.py' 2023-01-09T15:06:33,595 adding 'emzed/ext.py' 2023-01-09T15:06:33,596 adding 'emzed/gui.py' 2023-01-09T15:06:33,598 adding 'emzed/io.py' 2023-01-09T15:06:33,600 adding 'emzed/align/__init__.py' 2023-01-09T15:06:33,601 adding 'emzed/align/mz_align.py' 2023-01-09T15:06:33,602 adding 'emzed/align/mz_align_routines.py' 2023-01-09T15:06:33,604 adding 'emzed/align/rt_align.py' 2023-01-09T15:06:33,606 adding 'emzed/align/sample_alignment.py' 2023-01-09T15:06:33,607 adding 'emzed/annotate/__init__.py' 2023-01-09T15:06:33,609 adding 'emzed/annotate/annotate_adducts.py' 2023-01-09T15:06:33,613 adding 'emzed/chemistry/Elements.xml' 2023-01-09T15:06:33,614 adding 'emzed/chemistry/__init__.py' 2023-01-09T15:06:33,616 adding 'emzed/chemistry/abundance.py' 2023-01-09T15:06:33,617 adding 'emzed/chemistry/adducts.py' 2023-01-09T15:06:33,619 adding 'emzed/chemistry/elements.py' 2023-01-09T15:06:33,625 adding 'emzed/chemistry/elements_pubchem.json' 2023-01-09T15:06:33,626 adding 'emzed/chemistry/fetch_elements_pubchem.py' 2023-01-09T15:06:33,628 adding 'emzed/chemistry/fit_formula.py' 2023-01-09T15:06:33,629 adding 'emzed/chemistry/formula_parser.py' 2023-01-09T15:06:33,631 adding 'emzed/chemistry/isotope_generator.py' 2023-01-09T15:06:33,632 adding 'emzed/chemistry/mass.py' 2023-01-09T15:06:33,633 adding 'emzed/chemistry/molecular_formula.py' 2023-01-09T15:06:33,636 adding 'emzed/chemistry/pubchem.py' 2023-01-09T15:06:33,638 adding 'emzed/config/__init__.py' 2023-01-09T15:06:33,639 adding 'emzed/config/config.py' 2023-01-09T15:06:33,641 adding 'emzed/core/__init__.py' 2023-01-09T15:06:33,642 adding 'emzed/core/db_backed_dictionary.py' 2023-01-09T15:06:33,644 adding 'emzed/core/db_backed_model.py' 2023-01-09T15:06:33,645 adding 'emzed/core/exceptions.py' 2023-01-09T15:06:33,646 adding 'emzed/core/hashes.py' 2023-01-09T15:06:33,647 adding 'emzed/core/multiprocessing.py' 2023-01-09T15:06:33,649 adding 'emzed/ms2/__init__.py' 2023-01-09T15:06:33,651 adding 'emzed/ms2/attach_ms2_spectra.py' 2023-01-09T15:06:33,652 adding 'emzed/ms2/merge_spectra.py' 2023-01-09T15:06:33,654 adding 'emzed/ms2/sirius_export.py' 2023-01-09T15:06:33,655 adding 'emzed/ms_data/__init__.py' 2023-01-09T15:06:33,660 adding 'emzed/ms_data/peak_map.py' 2023-01-09T15:06:33,662 adding 'emzed/ms_data/peak_map_hasher.py' 2023-01-09T15:06:33,664 adding 'emzed/optimized/__init__.py' 2023-01-09T15:06:33,687 adding 'emzed/optimized/formula_fit.c' 2023-01-09T15:06:33,745 adding 'emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so' 2023-01-09T15:06:33,748 adding 'emzed/peak_picking/__init__.py' 2023-01-09T15:06:33,750 adding 'emzed/peak_picking/_run_feature_finder_metabo.py' 2023-01-09T15:06:33,752 adding 'emzed/peak_picking/_run_feature_finder_metabo_on_folder.py' 2023-01-09T15:06:33,753 adding 'emzed/peak_picking/extract_chromatograms.py' 2023-01-09T15:06:33,756 adding 'emzed/pyopenms/__init__.py' 2023-01-09T15:06:33,757 adding 'emzed/pyopenms/object_handling.py' 2023-01-09T15:06:33,759 adding 'emzed/pyopenms/optimizations.py' 2023-01-09T15:06:33,760 adding 'emzed/pyopenms/pyopenms_client.py' 2023-01-09T15:06:33,767 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T15:06:33,768 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T15:06:33,770 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T15:06:33,771 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T15:06:33,876 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T15:06:33,893 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T15:06:33,894 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T15:06:33,897 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T15:06:33,900 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T15:06:33,902 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T15:06:33,904 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T15:06:33,906 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T15:06:33,912 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T15:06:33,913 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T15:06:33,915 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T15:06:33,916 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T15:06:34,021 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T15:06:34,038 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T15:06:34,040 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T15:06:34,042 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T15:06:34,044 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T15:06:34,046 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T15:06:34,048 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T15:06:34,051 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T15:06:34,052 adding 'emzed/quantification/__init__.py' 2023-01-09T15:06:34,054 adding 'emzed/quantification/peak_integration.py' 2023-01-09T15:06:34,056 adding 'emzed/quantification/peak_shape_models/__init__.py' 2023-01-09T15:06:34,058 adding 'emzed/quantification/peak_shape_models/asymmetric_gauss_model.py' 2023-01-09T15:06:34,059 adding 'emzed/quantification/peak_shape_models/base.py' 2023-01-09T15:06:34,060 adding 'emzed/quantification/peak_shape_models/linear_interpolation_model.py' 2023-01-09T15:06:34,061 adding 'emzed/quantification/peak_shape_models/no_model.py' 2023-01-09T15:06:34,062 adding 'emzed/quantification/peak_shape_models/savgol_model.py' 2023-01-09T15:06:34,064 adding 'emzed/quantification/peak_shape_models/simplified_emg.py' 2023-01-09T15:06:34,066 adding 'emzed/r_connect/__init__.py' 2023-01-09T15:06:34,067 adding 'emzed/r_connect/patched_pyper.py' 2023-01-09T15:06:34,069 adding 'emzed/r_connect/r_executor.py' 2023-01-09T15:06:34,071 adding 'emzed/table/__init__.py' 2023-01-09T15:06:34,072 adding 'emzed/table/add_column.py' 2023-01-09T15:06:34,075 adding 'emzed/table/base_models.py' 2023-01-09T15:06:34,076 adding 'emzed/table/col_types.py' 2023-01-09T15:06:34,078 adding 'emzed/table/collapse.py' 2023-01-09T15:06:34,079 adding 'emzed/table/delete_rows.py' 2023-01-09T15:06:34,082 adding 'emzed/table/expressions.py' 2023-01-09T15:06:34,083 adding 'emzed/table/extract_columns_model.py' 2023-01-09T15:06:34,084 adding 'emzed/table/filter_model.py' 2023-01-09T15:06:34,087 adding 'emzed/table/full_table_model.py' 2023-01-09T15:06:34,088 adding 'emzed/table/group_by.py' 2023-01-09T15:06:34,089 adding 'emzed/table/immutable_table_model.py' 2023-01-09T15:06:34,091 adding 'emzed/table/join.py' 2023-01-09T15:06:34,092 adding 'emzed/table/load_into_from.py' 2023-01-09T15:06:34,094 adding 'emzed/table/prepare_table_cell_content.py' 2023-01-09T15:06:34,095 adding 'emzed/table/replace_column.py' 2023-01-09T15:06:34,096 adding 'emzed/table/row_class.py' 2023-01-09T15:06:34,098 adding 'emzed/table/select_model.py' 2023-01-09T15:06:34,099 adding 'emzed/table/sort_model.py' 2023-01-09T15:06:34,106 adding 'emzed/table/table.py' 2023-01-09T15:06:34,108 adding 'emzed/table/table_migrations.py' 2023-01-09T15:06:34,110 adding 'emzed/table/table_utils.py' 2023-01-09T15:06:34,112 adding 'emzed/targeted/__init__.py' 2023-01-09T15:06:34,113 adding 'emzed/targeted/solution_space.py' 2023-01-09T15:06:34,115 adding 'emzed/utils/__init__.py' 2023-01-09T15:06:34,116 adding 'emzed/utils/align_spectra.py' 2023-01-09T15:06:34,118 adding 'emzed/utils/busy_indicator.py' 2023-01-09T15:06:34,119 adding 'emzed/utils/download.py' 2023-01-09T15:06:34,120 adding 'emzed/utils/functools.py' 2023-01-09T15:06:34,121 adding 'emzed/utils/has_emzed_gui.py' 2023-01-09T15:06:34,122 adding 'emzed/utils/lookup.py' 2023-01-09T15:06:34,124 adding 'emzed/utils/sqlite.py' 2023-01-09T15:06:34,125 adding 'emzed/utils/temp_file_handling.py' 2023-01-09T15:06:34,132 adding 'emzed-3.0.0a5.dist-info/LICENSE' 2023-01-09T15:06:34,133 adding 'emzed-3.0.0a5.dist-info/METADATA' 2023-01-09T15:06:34,134 adding 'emzed-3.0.0a5.dist-info/WHEEL' 2023-01-09T15:06:34,135 adding 'emzed-3.0.0a5.dist-info/top_level.txt' 2023-01-09T15:06:34,137 adding 'emzed-3.0.0a5.dist-info/RECORD' 2023-01-09T15:06:34,151 removing build/bdist.linux-armv7l/wheel 2023-01-09T15:06:34,374 Building wheel for emzed (setup.py): finished with status 'done' 2023-01-09T15:06:34,386 Created wheel for emzed: filename=emzed-3.0.0a5-cp39-cp39-linux_armv7l.whl size=762474 sha256=63f1610d2c7b4b014f6684648e2fe830a3e12e472b7d3cce5b96542cdaa5edf2 2023-01-09T15:06:34,387 Stored in directory: /tmp/pip-ephem-wheel-cache-behrcj1o/wheels/6c/71/ef/1b8105e9df91933b45d8f3c689a6a9d1f4fe0a2055708f44b8 2023-01-09T15:06:34,404 Successfully built emzed 2023-01-09T15:06:34,436 Removed build tracker: '/tmp/pip-build-tracker-b_etr0s1'