2023-01-09T17:18:26,935 Created temporary directory: /tmp/pip-ephem-wheel-cache-y6nkipp9 2023-01-09T17:18:26,937 Created temporary directory: /tmp/pip-build-tracker-lx_ishct 2023-01-09T17:18:26,937 Initialized build tracking at /tmp/pip-build-tracker-lx_ishct 2023-01-09T17:18:26,937 Created build tracker: /tmp/pip-build-tracker-lx_ishct 2023-01-09T17:18:26,937 Entered build tracker: /tmp/pip-build-tracker-lx_ishct 2023-01-09T17:18:26,938 Created temporary directory: /tmp/pip-wheel-i5c9p77r 2023-01-09T17:18:26,941 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-09T17:18:26,944 Created temporary directory: /tmp/pip-ephem-wheel-cache-7zercjd5 2023-01-09T17:18:26,971 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-09T17:18:26,974 2 location(s) to search for versions of emzed: 2023-01-09T17:18:26,974 * https://pypi.org/simple/emzed/ 2023-01-09T17:18:26,974 * https://www.piwheels.org/simple/emzed/ 2023-01-09T17:18:26,975 Fetching project page and analyzing links: https://pypi.org/simple/emzed/ 2023-01-09T17:18:26,975 Getting page https://pypi.org/simple/emzed/ 2023-01-09T17:18:26,977 Found index url https://pypi.org/simple 2023-01-09T17:18:27,032 Fetched page https://pypi.org/simple/emzed/ as application/vnd.pypi.simple.v1+json 2023-01-09T17:18:27,054 Found link https://files.pythonhosted.org/packages/ac/e0/efad3689bc40c7ecbc85d9fd30595e6458055b5f5e627bf5ce261b79b8a6/emzed-2.10.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.0 2023-01-09T17:18:27,054 Found link https://files.pythonhosted.org/packages/48/b7/ed17ede3fc122860cc84a32a3f3eee8ec52399eba7765f9fefbcd959f548/emzed-2.10.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.1 2023-01-09T17:18:27,055 Found link https://files.pythonhosted.org/packages/c5/e2/c579987fdbf59648bb5ac4d4fded43f9b87f9b78b82582de8bba547db574/emzed-2.10.2.zip (from https://pypi.org/simple/emzed/), version: 2.10.2 2023-01-09T17:18:27,055 Found link https://files.pythonhosted.org/packages/f1/9a/147fc2ac5a015ac057452d4372a7d1d041f70410338e7ce68ccccbb9148c/emzed-2.11.1.win-amd64.zip (from https://pypi.org/simple/emzed/), version: 2.11.1.win-amd64 2023-01-09T17:18:27,056 Found link https://files.pythonhosted.org/packages/e6/53/e7ccf9447a21722eb0b73153b73917b5a2ecc6230a8fb60a60e81fcbfbb0/emzed-2.11.1.zip (from https://pypi.org/simple/emzed/), version: 2.11.1 2023-01-09T17:18:27,056 Found link 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https://files.pythonhosted.org/packages/2e/42/49c7dadc875b6ef409fb092ff36afae7b41db61a0556c7f91ea121a08fa6/emzed-2.12.7.tar.gz (from https://pypi.org/simple/emzed/), version: 2.12.7 2023-01-09T17:18:27,060 Found link https://files.pythonhosted.org/packages/b9/02/a896f2735c6a0014b5ec7e701820eedbb3fe46be4585637dd7127a3a8e87/emzed-2.12.8.tar.gz (from https://pypi.org/simple/emzed/), version: 2.12.8 2023-01-09T17:18:27,060 Found link https://files.pythonhosted.org/packages/cd/0e/c9146d97ee2e15fe8578dc03ee3856d094a04d0d1a823b859e4912d5121f/emzed-2.12.9.tar.gz (from https://pypi.org/simple/emzed/), version: 2.12.9 2023-01-09T17:18:27,061 Found link https://files.pythonhosted.org/packages/a8/18/73aa0f4cad291ad4e965f255f8e1a9c46e246019dfa9988919d2219a81ea/emzed-2.12.10.tar.gz (from https://pypi.org/simple/emzed/), version: 2.12.10 2023-01-09T17:18:27,061 Found link https://files.pythonhosted.org/packages/c0/a1/2f49a0fad1997daaa539d09af7e6f84aa72914648e88d6f627fdafbfeb50/emzed-2.12.11.tar.gz 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https://files.pythonhosted.org/packages/4d/c9/49662a6bb31a8d71369e4d0b636b68ed99156ba940b0d86212710aca485c/emzed-2.13.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.1 2023-01-09T17:18:27,063 Found link https://files.pythonhosted.org/packages/93/4f/ec3c9240434a037217f9e9817678b2125c1a741ca19e7b49fe12ffac528c/emzed-2.13.2.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.2 2023-01-09T17:18:27,063 Found link https://files.pythonhosted.org/packages/ec/b0/48b21b691973e6d9851ef741423619ae72c0bde96917f5d97116f3328b83/emzed-2.13.3.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.3 2023-01-09T17:18:27,063 Found link https://files.pythonhosted.org/packages/b8/3f/83bbc74a085eabd252ce58c821aeb9122790a07c11e382ae43eca9177ebd/emzed-2.14.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.14.0 2023-01-09T17:18:27,063 Found link https://files.pythonhosted.org/packages/db/a3/52cae75878dc5132237d4d4de469839ecb4041a3b7e63815f90a6c93a7cf/emzed-2.14.1.tar.gz (from 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https://files.pythonhosted.org/packages/ee/f8/cb3281937b227d3351a3babba0feaba857b753423ab0490cfbba80fdb730/emzed-2.20.4.tar.gz (from https://pypi.org/simple/emzed/), version: 2.20.4 2023-01-09T17:18:27,070 Found link https://files.pythonhosted.org/packages/0b/63/9d0981e58712874f13807597462bfa2e50ad32aab972beb30157980f6e1c/emzed-2.20.5.tar.gz (from https://pypi.org/simple/emzed/), version: 2.20.5 2023-01-09T17:18:27,070 Found link https://files.pythonhosted.org/packages/0d/95/679bd7b8f04e0532a6bc3fa6e09190805f2ec619d76fb9625ecba896fae9/emzed-2.21.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.21.0 2023-01-09T17:18:27,071 Found link https://files.pythonhosted.org/packages/07/ba/96922baf29e2510b54d437d42e8cfee88dbb5aa9129b5680f87de5ce7f60/emzed-2.22.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.22.0 2023-01-09T17:18:27,071 Found link https://files.pythonhosted.org/packages/af/82/58b2db5dccc6182a99c319ef297dfc8e9adc70b93264ac017f30aeb5d301/emzed-2.22.1.tar.gz (from 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https://www.piwheels.org/simple/emzed/emzed-2.11.2-py3-none-any.whl#sha256=23df32acaeca5808a90d0fbb457936ed20873280bc00ec571dfd6f9ead7fcc38 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T17:18:27,333 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.11.1-py3-none-any.whl#sha256=c3e7939f25dc51cf36a6c74da5da37fd43de8b46600793dbf2faee65442a449a (from https://www.piwheels.org/simple/emzed/) 2023-01-09T17:18:27,333 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.2-py3-none-any.whl#sha256=9ed9bbbfa797edad31f5e430d871121c9b71ba4d5f0e242a2d78c31ff05c7895 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T17:18:27,333 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.1-py3-none-any.whl#sha256=4e6f93fddc7e3db9b310df54491deca02efb5fad03ad72cced63702e014ad419 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T17:18:27,334 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.0-py3-none-any.whl#sha256=765232d1a671848379b1cbcea69506fedb5aab108760664426dc27204e46eeaf (from https://www.piwheels.org/simple/emzed/) 2023-01-09T17:18:27,334 Skipping link: not a file: https://www.piwheels.org/simple/emzed/ 2023-01-09T17:18:27,334 Skipping link: not a file: https://pypi.org/simple/emzed/ 2023-01-09T17:18:27,370 Given no hashes to check 1 links for project 'emzed': discarding no candidates 2023-01-09T17:18:27,387 Collecting emzed==3.0.0a7 2023-01-09T17:18:27,389 Created temporary directory: /tmp/pip-unpack-2cjq74y2 2023-01-09T17:18:27,440 Downloading emzed-3.0.0a7.tar.gz (572 kB) 2023-01-09T17:18:28,018 Added emzed==3.0.0a7 from https://files.pythonhosted.org/packages/11/bf/be5c8aeda818161f7718ce75f091295d20bc5dc408e04560a195458d8d88/emzed-3.0.0a7.tar.gz to build tracker '/tmp/pip-build-tracker-lx_ishct' 2023-01-09T17:18:28,020 Running setup.py (path:/tmp/pip-wheel-i5c9p77r/emzed_19fd0a9f57f54c3f850710ccf944fd44/setup.py) egg_info for package emzed 2023-01-09T17:18:28,020 Created temporary directory: /tmp/pip-pip-egg-info-9s9unltz 2023-01-09T17:18:28,021 Preparing metadata (setup.py): started 2023-01-09T17:18:28,022 Running command python setup.py egg_info 2023-01-09T17:18:29,233 running egg_info 2023-01-09T17:18:29,236 creating /tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info 2023-01-09T17:18:29,260 writing /tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/PKG-INFO 2023-01-09T17:18:29,263 writing dependency_links to /tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/dependency_links.txt 2023-01-09T17:18:29,266 writing requirements to /tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/requires.txt 2023-01-09T17:18:29,267 writing top-level names to /tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/top_level.txt 2023-01-09T17:18:29,269 writing manifest file '/tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/SOURCES.txt' 2023-01-09T17:18:29,360 reading manifest file '/tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/SOURCES.txt' 2023-01-09T17:18:29,362 reading manifest template 'MANIFEST.in' 2023-01-09T17:18:29,503 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T17:18:29,505 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T17:18:29,505 adding license file 'LICENSE' 2023-01-09T17:18:29,511 writing manifest file '/tmp/pip-pip-egg-info-9s9unltz/emzed.egg-info/SOURCES.txt' 2023-01-09T17:18:29,641 Preparing metadata (setup.py): finished with status 'done' 2023-01-09T17:18:29,647 Source in /tmp/pip-wheel-i5c9p77r/emzed_19fd0a9f57f54c3f850710ccf944fd44 has version 3.0.0a7, which satisfies requirement emzed==3.0.0a7 from https://files.pythonhosted.org/packages/11/bf/be5c8aeda818161f7718ce75f091295d20bc5dc408e04560a195458d8d88/emzed-3.0.0a7.tar.gz 2023-01-09T17:18:29,648 Removed emzed==3.0.0a7 from https://files.pythonhosted.org/packages/11/bf/be5c8aeda818161f7718ce75f091295d20bc5dc408e04560a195458d8d88/emzed-3.0.0a7.tar.gz from build tracker '/tmp/pip-build-tracker-lx_ishct' 2023-01-09T17:18:29,653 Created temporary directory: /tmp/pip-unpack-1cwb808p 2023-01-09T17:18:29,653 Building wheels for collected packages: emzed 2023-01-09T17:18:29,659 Created temporary directory: /tmp/pip-wheel-l1n4p9dn 2023-01-09T17:18:29,659 Building wheel for emzed (setup.py): started 2023-01-09T17:18:29,660 Destination directory: /tmp/pip-wheel-l1n4p9dn 2023-01-09T17:18:29,660 Running command python setup.py bdist_wheel 2023-01-09T17:18:30,825 running bdist_wheel 2023-01-09T17:18:30,891 running build 2023-01-09T17:18:30,891 running build_py 2023-01-09T17:18:30,917 creating build 2023-01-09T17:18:30,917 creating build/lib.linux-armv7l-cpython-39 2023-01-09T17:18:30,918 creating build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,919 copying src/emzed/check_pyopenms.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,921 copying src/emzed/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,922 copying src/emzed/io.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,925 copying src/emzed/db.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,927 copying src/emzed/gui.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,928 copying src/emzed/__main__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,930 copying src/emzed/ext.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T17:18:30,933 creating build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,934 copying src/emzed/table/sort_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,936 copying src/emzed/table/table_migrations.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,937 copying src/emzed/table/table_utils.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,940 copying src/emzed/table/base_models.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,942 copying src/emzed/table/filter_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,944 copying src/emzed/table/full_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,947 copying src/emzed/table/delete_rows.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,949 copying src/emzed/table/load_into_from.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,951 copying src/emzed/table/replace_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,953 copying src/emzed/table/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,955 copying src/emzed/table/immutable_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,957 copying src/emzed/table/collapse.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,959 copying src/emzed/table/prepare_table_cell_content.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,960 copying src/emzed/table/join.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,963 copying src/emzed/table/group_by.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,965 copying src/emzed/table/row_class.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,967 copying src/emzed/table/table.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,971 copying src/emzed/table/col_types.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,972 copying src/emzed/table/add_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,974 copying src/emzed/table/extract_columns_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,975 copying src/emzed/table/expressions.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,978 copying src/emzed/table/select_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T17:18:30,981 creating build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,981 copying src/emzed/utils/align_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,983 copying src/emzed/utils/busy_indicator.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,985 copying src/emzed/utils/download.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,987 copying src/emzed/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,989 copying src/emzed/utils/lookup.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,990 copying src/emzed/utils/has_emzed_gui.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,992 copying src/emzed/utils/sqlite.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,994 copying src/emzed/utils/temp_file_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,996 copying src/emzed/utils/functools.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T17:18:30,998 creating build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T17:18:30,999 copying src/emzed/annotate/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T17:18:31,001 copying src/emzed/annotate/annotate_adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T17:18:31,004 creating build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T17:18:31,005 copying src/emzed/quantification/peak_integration.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T17:18:31,007 copying src/emzed/quantification/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T17:18:31,010 creating build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T17:18:31,011 copying src/emzed/peak_picking/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T17:18:31,012 copying src/emzed/peak_picking/_run_feature_finder_metabo.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T17:18:31,015 copying src/emzed/peak_picking/extract_chromatograms.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T17:18:31,017 copying src/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T17:18:31,020 creating build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T17:18:31,021 copying src/emzed/ms2/merge_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T17:18:31,023 copying src/emzed/ms2/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T17:18:31,024 copying src/emzed/ms2/attach_ms2_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T17:18:31,027 copying src/emzed/ms2/sirius_export.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T17:18:31,029 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T17:18:31,030 copying src/emzed/pyopenms/optimizations.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T17:18:31,032 copying src/emzed/pyopenms/pyopenms_client.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T17:18:31,034 copying src/emzed/pyopenms/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T17:18:31,037 copying src/emzed/pyopenms/object_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T17:18:31,039 creating build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,040 copying src/emzed/align/sample_alignment.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,042 copying src/emzed/align/mz_align_routines.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,044 copying src/emzed/align/mz_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,046 copying src/emzed/align/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,048 copying src/emzed/align/rt_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T17:18:31,051 creating build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T17:18:31,052 copying src/emzed/targeted/solution_space.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T17:18:31,054 copying src/emzed/targeted/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T17:18:31,056 creating build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T17:18:31,056 copying src/emzed/optimized/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T17:18:31,059 creating build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,060 copying src/emzed/core/db_backed_model.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,062 copying src/emzed/core/multiprocessing.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,063 copying src/emzed/core/exceptions.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,065 copying src/emzed/core/db_backed_dictionary.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,067 copying src/emzed/core/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,069 copying src/emzed/core/hashes.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T17:18:31,071 creating build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T17:18:31,072 copying src/emzed/ms_data/peak_map.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T17:18:31,076 copying src/emzed/ms_data/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T17:18:31,077 copying src/emzed/ms_data/peak_map_hasher.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T17:18:31,080 creating build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T17:18:31,081 copying src/emzed/config/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T17:18:31,082 copying src/emzed/config/config.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T17:18:31,085 creating build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T17:18:31,086 copying src/emzed/r_connect/patched_pyper.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T17:18:31,088 copying src/emzed/r_connect/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T17:18:31,090 copying src/emzed/r_connect/r_executor.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T17:18:31,093 creating build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,094 copying src/emzed/chemistry/adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,096 copying src/emzed/chemistry/elements.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,099 copying src/emzed/chemistry/formula_parser.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,101 copying src/emzed/chemistry/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,102 copying src/emzed/chemistry/molecular_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,104 copying src/emzed/chemistry/fetch_elements_pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,106 copying src/emzed/chemistry/fit_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,108 copying src/emzed/chemistry/pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,111 copying src/emzed/chemistry/isotope_generator.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,113 copying src/emzed/chemistry/mass.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,115 copying src/emzed/chemistry/abundance.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,118 creating build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,119 copying src/emzed/quantification/peak_shape_models/savgol_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,121 copying src/emzed/quantification/peak_shape_models/base.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,123 copying src/emzed/quantification/peak_shape_models/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,124 copying src/emzed/quantification/peak_shape_models/simplified_emg.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,126 copying src/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,128 copying src/emzed/quantification/peak_shape_models/no_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,130 copying src/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T17:18:31,132 running egg_info 2023-01-09T17:18:31,180 writing src/emzed.egg-info/PKG-INFO 2023-01-09T17:18:31,182 writing dependency_links to src/emzed.egg-info/dependency_links.txt 2023-01-09T17:18:31,184 writing requirements to src/emzed.egg-info/requires.txt 2023-01-09T17:18:31,186 writing top-level names to src/emzed.egg-info/top_level.txt 2023-01-09T17:18:31,223 reading manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T17:18:31,228 reading manifest template 'MANIFEST.in' 2023-01-09T17:18:31,365 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T17:18:31,366 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T17:18:31,366 adding license file 'LICENSE' 2023-01-09T17:18:31,374 writing manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T17:18:31,378 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib' as data is deprecated, please list it in `packages`. 2023-01-09T17:18:31,378 !! 2023-01-09T17:18:31,379 ############################ 2023-01-09T17:18:31,379 # Package would be ignored # 2023-01-09T17:18:31,379 ############################ 2023-01-09T17:18:31,379 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib' as an importable package, 2023-01-09T17:18:31,379 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T17:18:31,379 'emzed.pyopenms._pyopenms_venv.lib' has been automatically added to the distribution only 2023-01-09T17:18:31,379 because it may contain data files, but this behavior is likely to change 2023-01-09T17:18:31,380 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T17:18:31,380 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib' is included as a package by using 2023-01-09T17:18:31,380 the `packages` configuration field or the proper discovery methods 2023-01-09T17:18:31,380 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T17:18:31,380 instead of `find_packages(...)`/`find:`). 2023-01-09T17:18:31,380 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T17:18:31,380 documentation page. 2023-01-09T17:18:31,381 !! 2023-01-09T17:18:31,381 check.warn(importable) 2023-01-09T17:18:31,381 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib64' as data is deprecated, please list it in `packages`. 2023-01-09T17:18:31,381 !! 2023-01-09T17:18:31,382 ############################ 2023-01-09T17:18:31,382 # Package would be ignored # 2023-01-09T17:18:31,382 ############################ 2023-01-09T17:18:31,382 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib64' as an importable package, 2023-01-09T17:18:31,382 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T17:18:31,382 'emzed.pyopenms._pyopenms_venv.lib64' has been automatically added to the distribution only 2023-01-09T17:18:31,382 because it may contain data files, but this behavior is likely to change 2023-01-09T17:18:31,383 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T17:18:31,383 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib64' is included as a package by using 2023-01-09T17:18:31,383 the `packages` configuration field or the proper discovery methods 2023-01-09T17:18:31,383 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T17:18:31,383 instead of `find_packages(...)`/`find:`). 2023-01-09T17:18:31,383 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T17:18:31,383 documentation page. 2023-01-09T17:18:31,384 !! 2023-01-09T17:18:31,384 check.warn(importable) 2023-01-09T17:18:31,387 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv 2023-01-09T17:18:31,387 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T17:18:31,388 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T17:18:31,389 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T17:18:31,390 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T17:18:31,390 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T17:18:31,391 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T17:18:31,392 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,393 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,396 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,399 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,402 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,404 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,458 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,458 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,461 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,463 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,464 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,467 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,470 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,474 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,477 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T17:18:31,477 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T17:18:31,478 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T17:18:31,481 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T17:18:31,481 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T17:18:31,482 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T17:18:31,482 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T17:18:31,483 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T17:18:31,484 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T17:18:31,484 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,485 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,488 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,491 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,494 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,496 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:31,549 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,550 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,552 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:31,554 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,555 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,559 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,562 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,565 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:31,568 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T17:18:31,568 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T17:18:31,570 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T17:18:31,572 copying src/emzed/optimized/formula_fit.c -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T17:18:31,580 copying src/emzed/chemistry/Elements.xml -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,584 copying src/emzed/chemistry/elements_pubchem.json -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T17:18:31,598 running build_ext 2023-01-09T17:18:31,947 building 'emzed.optimized.formula_fit' extension 2023-01-09T17:18:31,947 creating build/temp.linux-armv7l-cpython-39 2023-01-09T17:18:31,948 creating build/temp.linux-armv7l-cpython-39/src 2023-01-09T17:18:31,948 creating build/temp.linux-armv7l-cpython-39/src/emzed 2023-01-09T17:18:31,949 creating build/temp.linux-armv7l-cpython-39/src/emzed/optimized 2023-01-09T17:18:31,950 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -c src/emzed/optimized/formula_fit.c -o build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o 2023-01-09T17:18:32,361 src/emzed/optimized/formula_fit.c: In function ‘__Pyx_ParseOptionalKeywords’: 2023-01-09T17:18:32,363 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,363 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,364 | ^ 2023-01-09T17:18:32,364 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,364 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,364 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,364 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,364 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,364 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,366 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,366 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,366 | ^ 2023-01-09T17:18:32,367 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,367 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,367 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,367 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T17:18:32,367 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T17:18:32,367 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,368 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,369 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,369 | ^ 2023-01-09T17:18:32,369 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,369 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,369 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,369 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,369 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,370 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,371 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,371 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,371 | ^ 2023-01-09T17:18:32,371 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,371 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,371 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,372 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,372 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,372 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,373 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,373 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,373 | ^ 2023-01-09T17:18:32,374 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,374 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,374 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,374 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T17:18:32,374 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T17:18:32,374 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,375 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,376 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,376 | ^ 2023-01-09T17:18:32,376 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,376 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,376 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,376 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,376 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,376 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,379 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,379 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,379 | ^ 2023-01-09T17:18:32,379 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,379 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,379 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,379 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,380 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,380 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,381 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,381 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,381 | ^ 2023-01-09T17:18:32,381 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,381 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,382 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,382 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T17:18:32,382 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T17:18:32,382 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,383 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,383 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,383 | ^ 2023-01-09T17:18:32,384 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,384 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,384 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,384 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,384 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,384 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,385 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,386 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,386 | ^ 2023-01-09T17:18:32,386 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,386 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,386 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,386 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,386 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,386 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,388 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,388 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,388 | ^ 2023-01-09T17:18:32,388 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,388 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,388 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,389 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T17:18:32,389 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T17:18:32,389 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:32,390 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T17:18:32,390 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T17:18:32,390 | ^ 2023-01-09T17:18:32,391 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T17:18:32,391 from /usr/include/python3.9/Python.h:97, 2023-01-09T17:18:32,391 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T17:18:32,391 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T17:18:32,391 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T17:18:32,391 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T17:18:37,530 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so 2023-01-09T17:18:37,658 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-09T17:18:37,658 warnings.warn( 2023-01-09T17:18:37,684 installing to build/bdist.linux-armv7l/wheel 2023-01-09T17:18:37,685 running install 2023-01-09T17:18:37,711 running install_lib 2023-01-09T17:18:37,736 creating build/bdist.linux-armv7l 2023-01-09T17:18:37,737 creating build/bdist.linux-armv7l/wheel 2023-01-09T17:18:37,738 creating build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:37,740 creating build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,741 copying build/lib.linux-armv7l-cpython-39/emzed/table/sort_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,743 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_migrations.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,745 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_utils.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,748 copying build/lib.linux-armv7l-cpython-39/emzed/table/base_models.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,751 copying build/lib.linux-armv7l-cpython-39/emzed/table/filter_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,753 copying build/lib.linux-armv7l-cpython-39/emzed/table/full_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,755 copying build/lib.linux-armv7l-cpython-39/emzed/table/delete_rows.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,757 copying build/lib.linux-armv7l-cpython-39/emzed/table/load_into_from.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,759 copying build/lib.linux-armv7l-cpython-39/emzed/table/replace_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,761 copying build/lib.linux-armv7l-cpython-39/emzed/table/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,763 copying build/lib.linux-armv7l-cpython-39/emzed/table/immutable_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,765 copying build/lib.linux-armv7l-cpython-39/emzed/table/collapse.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,767 copying build/lib.linux-armv7l-cpython-39/emzed/table/prepare_table_cell_content.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,769 copying build/lib.linux-armv7l-cpython-39/emzed/table/join.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,772 copying build/lib.linux-armv7l-cpython-39/emzed/table/group_by.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,774 copying build/lib.linux-armv7l-cpython-39/emzed/table/row_class.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,776 copying build/lib.linux-armv7l-cpython-39/emzed/table/table.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,780 copying build/lib.linux-armv7l-cpython-39/emzed/table/col_types.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,782 copying build/lib.linux-armv7l-cpython-39/emzed/table/add_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,783 copying build/lib.linux-armv7l-cpython-39/emzed/table/extract_columns_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,785 copying build/lib.linux-armv7l-cpython-39/emzed/table/expressions.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,788 copying build/lib.linux-armv7l-cpython-39/emzed/table/select_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T17:18:37,791 creating build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,792 copying build/lib.linux-armv7l-cpython-39/emzed/utils/align_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,794 copying build/lib.linux-armv7l-cpython-39/emzed/utils/busy_indicator.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,796 copying build/lib.linux-armv7l-cpython-39/emzed/utils/download.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,797 copying build/lib.linux-armv7l-cpython-39/emzed/utils/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,799 copying build/lib.linux-armv7l-cpython-39/emzed/utils/lookup.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,801 copying build/lib.linux-armv7l-cpython-39/emzed/utils/has_emzed_gui.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,803 copying build/lib.linux-armv7l-cpython-39/emzed/utils/sqlite.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,805 copying build/lib.linux-armv7l-cpython-39/emzed/utils/temp_file_handling.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,807 copying build/lib.linux-armv7l-cpython-39/emzed/utils/functools.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T17:18:37,809 copying build/lib.linux-armv7l-cpython-39/emzed/check_pyopenms.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:37,811 creating build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T17:18:37,812 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T17:18:37,814 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/annotate_adducts.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T17:18:37,817 copying build/lib.linux-armv7l-cpython-39/emzed/__init__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:37,819 creating build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T17:18:37,820 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_integration.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T17:18:37,823 creating build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,824 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/savgol_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,826 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/base.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,828 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,830 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/simplified_emg.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,833 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,835 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/no_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,837 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T17:18:37,839 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T17:18:37,841 copying build/lib.linux-armv7l-cpython-39/emzed/io.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:37,844 creating build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T17:18:37,845 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T17:18:37,847 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T17:18:37,850 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/extract_chromatograms.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T17:18:37,852 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T17:18:37,855 creating build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T17:18:37,855 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/merge_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T17:18:37,857 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T17:18:37,859 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/attach_ms2_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T17:18:37,862 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/sirius_export.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T17:18:37,864 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T17:18:37,865 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/optimizations.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T17:18:37,868 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv 2023-01-09T17:18:37,870 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T17:18:37,871 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T17:18:37,873 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T17:18:37,874 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T17:18:37,876 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T17:18:37,877 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T17:18:37,879 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T17:18:37,880 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T17:18:37,882 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T17:18:37,884 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,884 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,887 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,938 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,941 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,943 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,946 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:37,947 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:37,949 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:37,951 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:37,952 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:37,955 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:37,959 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:37,962 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:37,965 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T17:18:37,967 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T17:18:37,968 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T17:18:37,970 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T17:18:37,971 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T17:18:37,972 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T17:18:37,975 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T17:18:37,976 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T17:18:37,978 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T17:18:37,979 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,980 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:37,983 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:38,034 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:38,036 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:38,039 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T17:18:38,042 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:38,043 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:38,046 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T17:18:38,048 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:38,050 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:38,053 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:38,056 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:38,059 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T17:18:38,062 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/pyopenms_client.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T17:18:38,064 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T17:18:38,066 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/object_handling.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T17:18:38,069 creating build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,070 copying build/lib.linux-armv7l-cpython-39/emzed/align/sample_alignment.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,072 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align_routines.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,074 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,079 copying build/lib.linux-armv7l-cpython-39/emzed/align/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,081 copying build/lib.linux-armv7l-cpython-39/emzed/align/rt_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T17:18:38,083 copying build/lib.linux-armv7l-cpython-39/emzed/db.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:38,085 creating build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T17:18:38,086 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/solution_space.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T17:18:38,088 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T17:18:38,091 creating build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T17:18:38,091 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T17:18:38,100 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T17:18:38,101 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.c -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T17:18:38,112 copying build/lib.linux-armv7l-cpython-39/emzed/gui.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:38,114 creating build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,115 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_model.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,117 copying build/lib.linux-armv7l-cpython-39/emzed/core/multiprocessing.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,119 copying build/lib.linux-armv7l-cpython-39/emzed/core/exceptions.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,121 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_dictionary.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,123 copying build/lib.linux-armv7l-cpython-39/emzed/core/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,125 copying build/lib.linux-armv7l-cpython-39/emzed/core/hashes.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T17:18:38,127 creating build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T17:18:38,128 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T17:18:38,132 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T17:18:38,133 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map_hasher.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T17:18:38,136 creating build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T17:18:38,136 copying build/lib.linux-armv7l-cpython-39/emzed/config/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T17:18:38,138 copying build/lib.linux-armv7l-cpython-39/emzed/config/config.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T17:18:38,141 creating build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T17:18:38,141 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/patched_pyper.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T17:18:38,143 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T17:18:38,145 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/r_executor.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T17:18:38,147 copying build/lib.linux-armv7l-cpython-39/emzed/__main__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:38,150 creating build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,150 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/adducts.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,152 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,154 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements_pubchem.json -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,159 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/formula_parser.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,161 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,162 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/molecular_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,164 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fetch_elements_pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,166 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fit_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,168 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,171 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/isotope_generator.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,173 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/mass.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,175 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/abundance.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,176 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/Elements.xml -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T17:18:38,180 copying build/lib.linux-armv7l-cpython-39/emzed/ext.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T17:18:38,181 running install_egg_info 2023-01-09T17:18:38,208 Copying src/emzed.egg-info to build/bdist.linux-armv7l/wheel/emzed-3.0.0a7-py3.9.egg-info 2023-01-09T17:18:38,221 running install_scripts 2023-01-09T17:18:38,271 Traceback (most recent call last): 2023-01-09T17:18:38,271 File "", line 1, in 2023-01-09T17:18:38,272 ModuleNotFoundError: No module named 'emzed' 2023-01-09T17:18:38,306 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-01-09T17:18:38,312 creating build/bdist.linux-armv7l/wheel/emzed-3.0.0a7.dist-info/WHEEL 2023-01-09T17:18:38,314 creating '/tmp/pip-wheel-l1n4p9dn/emzed-3.0.0a7-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-09T17:18:38,317 adding 'emzed/__init__.py' 2023-01-09T17:18:38,319 adding 'emzed/__main__.py' 2023-01-09T17:18:38,320 adding 'emzed/check_pyopenms.py' 2023-01-09T17:18:38,321 adding 'emzed/db.py' 2023-01-09T17:18:38,323 adding 'emzed/ext.py' 2023-01-09T17:18:38,324 adding 'emzed/gui.py' 2023-01-09T17:18:38,325 adding 'emzed/io.py' 2023-01-09T17:18:38,327 adding 'emzed/align/__init__.py' 2023-01-09T17:18:38,328 adding 'emzed/align/mz_align.py' 2023-01-09T17:18:38,330 adding 'emzed/align/mz_align_routines.py' 2023-01-09T17:18:38,332 adding 'emzed/align/rt_align.py' 2023-01-09T17:18:38,333 adding 'emzed/align/sample_alignment.py' 2023-01-09T17:18:38,335 adding 'emzed/annotate/__init__.py' 2023-01-09T17:18:38,336 adding 'emzed/annotate/annotate_adducts.py' 2023-01-09T17:18:38,341 adding 'emzed/chemistry/Elements.xml' 2023-01-09T17:18:38,342 adding 'emzed/chemistry/__init__.py' 2023-01-09T17:18:38,343 adding 'emzed/chemistry/abundance.py' 2023-01-09T17:18:38,344 adding 'emzed/chemistry/adducts.py' 2023-01-09T17:18:38,346 adding 'emzed/chemistry/elements.py' 2023-01-09T17:18:38,352 adding 'emzed/chemistry/elements_pubchem.json' 2023-01-09T17:18:38,354 adding 'emzed/chemistry/fetch_elements_pubchem.py' 2023-01-09T17:18:38,356 adding 'emzed/chemistry/fit_formula.py' 2023-01-09T17:18:38,357 adding 'emzed/chemistry/formula_parser.py' 2023-01-09T17:18:38,359 adding 'emzed/chemistry/isotope_generator.py' 2023-01-09T17:18:38,360 adding 'emzed/chemistry/mass.py' 2023-01-09T17:18:38,361 adding 'emzed/chemistry/molecular_formula.py' 2023-01-09T17:18:38,363 adding 'emzed/chemistry/pubchem.py' 2023-01-09T17:18:38,365 adding 'emzed/config/__init__.py' 2023-01-09T17:18:38,366 adding 'emzed/config/config.py' 2023-01-09T17:18:38,368 adding 'emzed/core/__init__.py' 2023-01-09T17:18:38,370 adding 'emzed/core/db_backed_dictionary.py' 2023-01-09T17:18:38,371 adding 'emzed/core/db_backed_model.py' 2023-01-09T17:18:38,372 adding 'emzed/core/exceptions.py' 2023-01-09T17:18:38,374 adding 'emzed/core/hashes.py' 2023-01-09T17:18:38,375 adding 'emzed/core/multiprocessing.py' 2023-01-09T17:18:38,377 adding 'emzed/ms2/__init__.py' 2023-01-09T17:18:38,378 adding 'emzed/ms2/attach_ms2_spectra.py' 2023-01-09T17:18:38,380 adding 'emzed/ms2/merge_spectra.py' 2023-01-09T17:18:38,381 adding 'emzed/ms2/sirius_export.py' 2023-01-09T17:18:38,383 adding 'emzed/ms_data/__init__.py' 2023-01-09T17:18:38,388 adding 'emzed/ms_data/peak_map.py' 2023-01-09T17:18:38,390 adding 'emzed/ms_data/peak_map_hasher.py' 2023-01-09T17:18:38,391 adding 'emzed/optimized/__init__.py' 2023-01-09T17:18:38,414 adding 'emzed/optimized/formula_fit.c' 2023-01-09T17:18:38,472 adding 'emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so' 2023-01-09T17:18:38,476 adding 'emzed/peak_picking/__init__.py' 2023-01-09T17:18:38,478 adding 'emzed/peak_picking/_run_feature_finder_metabo.py' 2023-01-09T17:18:38,480 adding 'emzed/peak_picking/_run_feature_finder_metabo_on_folder.py' 2023-01-09T17:18:38,481 adding 'emzed/peak_picking/extract_chromatograms.py' 2023-01-09T17:18:38,483 adding 'emzed/pyopenms/__init__.py' 2023-01-09T17:18:38,485 adding 'emzed/pyopenms/object_handling.py' 2023-01-09T17:18:38,486 adding 'emzed/pyopenms/optimizations.py' 2023-01-09T17:18:38,488 adding 'emzed/pyopenms/pyopenms_client.py' 2023-01-09T17:18:38,494 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T17:18:38,495 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T17:18:38,497 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T17:18:38,499 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T17:18:38,631 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T17:18:38,648 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T17:18:38,650 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T17:18:38,652 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T17:18:38,654 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T17:18:38,656 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T17:18:38,658 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T17:18:38,661 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T17:18:38,667 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T17:18:38,668 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T17:18:38,670 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T17:18:38,671 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T17:18:38,776 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T17:18:38,793 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T17:18:38,794 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T17:18:38,797 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T17:18:38,799 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T17:18:38,801 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T17:18:38,803 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T17:18:38,806 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T17:18:38,807 adding 'emzed/quantification/__init__.py' 2023-01-09T17:18:38,809 adding 'emzed/quantification/peak_integration.py' 2023-01-09T17:18:38,811 adding 'emzed/quantification/peak_shape_models/__init__.py' 2023-01-09T17:18:38,813 adding 'emzed/quantification/peak_shape_models/asymmetric_gauss_model.py' 2023-01-09T17:18:38,814 adding 'emzed/quantification/peak_shape_models/base.py' 2023-01-09T17:18:38,815 adding 'emzed/quantification/peak_shape_models/linear_interpolation_model.py' 2023-01-09T17:18:38,816 adding 'emzed/quantification/peak_shape_models/no_model.py' 2023-01-09T17:18:38,818 adding 'emzed/quantification/peak_shape_models/savgol_model.py' 2023-01-09T17:18:38,819 adding 'emzed/quantification/peak_shape_models/simplified_emg.py' 2023-01-09T17:18:38,821 adding 'emzed/r_connect/__init__.py' 2023-01-09T17:18:38,822 adding 'emzed/r_connect/patched_pyper.py' 2023-01-09T17:18:38,824 adding 'emzed/r_connect/r_executor.py' 2023-01-09T17:18:38,826 adding 'emzed/table/__init__.py' 2023-01-09T17:18:38,827 adding 'emzed/table/add_column.py' 2023-01-09T17:18:38,830 adding 'emzed/table/base_models.py' 2023-01-09T17:18:38,832 adding 'emzed/table/col_types.py' 2023-01-09T17:18:38,833 adding 'emzed/table/collapse.py' 2023-01-09T17:18:38,834 adding 'emzed/table/delete_rows.py' 2023-01-09T17:18:38,837 adding 'emzed/table/expressions.py' 2023-01-09T17:18:38,839 adding 'emzed/table/extract_columns_model.py' 2023-01-09T17:18:38,840 adding 'emzed/table/filter_model.py' 2023-01-09T17:18:38,842 adding 'emzed/table/full_table_model.py' 2023-01-09T17:18:38,844 adding 'emzed/table/group_by.py' 2023-01-09T17:18:38,845 adding 'emzed/table/immutable_table_model.py' 2023-01-09T17:18:38,847 adding 'emzed/table/join.py' 2023-01-09T17:18:38,848 adding 'emzed/table/load_into_from.py' 2023-01-09T17:18:38,850 adding 'emzed/table/prepare_table_cell_content.py' 2023-01-09T17:18:38,851 adding 'emzed/table/replace_column.py' 2023-01-09T17:18:38,853 adding 'emzed/table/row_class.py' 2023-01-09T17:18:38,854 adding 'emzed/table/select_model.py' 2023-01-09T17:18:38,855 adding 'emzed/table/sort_model.py' 2023-01-09T17:18:38,863 adding 'emzed/table/table.py' 2023-01-09T17:18:38,864 adding 'emzed/table/table_migrations.py' 2023-01-09T17:18:38,867 adding 'emzed/table/table_utils.py' 2023-01-09T17:18:38,869 adding 'emzed/targeted/__init__.py' 2023-01-09T17:18:38,870 adding 'emzed/targeted/solution_space.py' 2023-01-09T17:18:38,872 adding 'emzed/utils/__init__.py' 2023-01-09T17:18:38,873 adding 'emzed/utils/align_spectra.py' 2023-01-09T17:18:38,875 adding 'emzed/utils/busy_indicator.py' 2023-01-09T17:18:38,876 adding 'emzed/utils/download.py' 2023-01-09T17:18:38,877 adding 'emzed/utils/functools.py' 2023-01-09T17:18:38,878 adding 'emzed/utils/has_emzed_gui.py' 2023-01-09T17:18:38,880 adding 'emzed/utils/lookup.py' 2023-01-09T17:18:38,881 adding 'emzed/utils/sqlite.py' 2023-01-09T17:18:38,883 adding 'emzed/utils/temp_file_handling.py' 2023-01-09T17:18:38,890 adding 'emzed-3.0.0a7.dist-info/LICENSE' 2023-01-09T17:18:38,891 adding 'emzed-3.0.0a7.dist-info/METADATA' 2023-01-09T17:18:38,892 adding 'emzed-3.0.0a7.dist-info/WHEEL' 2023-01-09T17:18:38,893 adding 'emzed-3.0.0a7.dist-info/top_level.txt' 2023-01-09T17:18:38,895 adding 'emzed-3.0.0a7.dist-info/RECORD' 2023-01-09T17:18:38,910 removing build/bdist.linux-armv7l/wheel 2023-01-09T17:18:39,141 Building wheel for emzed (setup.py): finished with status 'done' 2023-01-09T17:18:39,152 Created wheel for emzed: filename=emzed-3.0.0a7-cp39-cp39-linux_armv7l.whl size=762603 sha256=09629105fcb0e2099a7f26df420b349f8520d891fe3c34035d427857a0670acb 2023-01-09T17:18:39,153 Stored in directory: /tmp/pip-ephem-wheel-cache-7zercjd5/wheels/3f/ef/a5/17eee58278b0e75b51656afc502e593cd8df485474916641ad 2023-01-09T17:18:39,171 Successfully built emzed 2023-01-09T17:18:39,196 Removed build tracker: '/tmp/pip-build-tracker-lx_ishct'