2023-01-10T14:19:42,049 Created temporary directory: /tmp/pip-ephem-wheel-cache-i5r7ey3s 2023-01-10T14:19:42,051 Created temporary directory: /tmp/pip-build-tracker-fpxql6jd 2023-01-10T14:19:42,051 Initialized build tracking at /tmp/pip-build-tracker-fpxql6jd 2023-01-10T14:19:42,051 Created build tracker: /tmp/pip-build-tracker-fpxql6jd 2023-01-10T14:19:42,051 Entered build tracker: /tmp/pip-build-tracker-fpxql6jd 2023-01-10T14:19:42,052 Created temporary directory: /tmp/pip-wheel-ml80p3am 2023-01-10T14:19:42,055 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-10T14:19:42,058 Created temporary directory: /tmp/pip-ephem-wheel-cache-0cc9k8d3 2023-01-10T14:19:42,086 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-10T14:19:42,089 2 location(s) to search for versions of dega: 2023-01-10T14:19:42,089 * https://pypi.org/simple/dega/ 2023-01-10T14:19:42,089 * https://www.piwheels.org/simple/dega/ 2023-01-10T14:19:42,089 Fetching project page and analyzing links: https://pypi.org/simple/dega/ 2023-01-10T14:19:42,090 Getting page https://pypi.org/simple/dega/ 2023-01-10T14:19:42,091 Found index url https://pypi.org/simple 2023-01-10T14:19:42,144 Fetched page https://pypi.org/simple/dega/ as application/vnd.pypi.simple.v1+json 2023-01-10T14:19:42,146 Found link https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.1.0 2023-01-10T14:19:42,146 Fetching project page and analyzing links: https://www.piwheels.org/simple/dega/ 2023-01-10T14:19:42,146 Getting page https://www.piwheels.org/simple/dega/ 2023-01-10T14:19:42,147 Found index url https://www.piwheels.org/simple 2023-01-10T14:19:42,306 Fetched page https://www.piwheels.org/simple/dega/ as text/html 2023-01-10T14:19:42,307 Skipping link: not a file: https://www.piwheels.org/simple/dega/ 2023-01-10T14:19:42,307 Skipping link: not a file: https://pypi.org/simple/dega/ 2023-01-10T14:19:42,325 Given no hashes to check 1 links for project 'dega': discarding no candidates 2023-01-10T14:19:42,342 Collecting dega==0.1.0 2023-01-10T14:19:42,344 Created temporary directory: /tmp/pip-unpack-l84ujtnf 2023-01-10T14:19:42,540 Downloading DEGA-0.1.0.tar.gz (498 kB) 2023-01-10T14:19:42,807 Added dega==0.1.0 from https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-fpxql6jd' 2023-01-10T14:19:42,815 Created temporary directory: /tmp/pip-build-env-jxzkmo3j 2023-01-10T14:19:42,823 Installing build dependencies: started 2023-01-10T14:19:42,823 Running command pip subprocess to install build dependencies 2023-01-10T14:19:44,034 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-01-10T14:19:44,428 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-10T14:19:44,453 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-10T14:19:46,068 Collecting setuptools 2023-01-10T14:19:46,195 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2023-01-10T14:19:46,465 Collecting wheel 2023-01-10T14:19:46,483 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-01-10T14:19:47,775 Collecting Cython 2023-01-10T14:19:48,238 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB) 2023-01-10T14:19:48,551 Collecting pythran 2023-01-10T14:19:48,957 Using cached https://www.piwheels.org/simple/pythran/pythran-0.12.0-py3-none-any.whl (4.2 MB) 2023-01-10T14:19:49,865 Collecting scipy 2023-01-10T14:19:56,309 Using cached https://www.piwheels.org/simple/scipy/SciPy-1.8.1-cp39-cp39-linux_armv7l.whl (72.2 MB) 2023-01-10T14:20:00,253 Collecting numpy 2023-01-10T14:20:01,417 Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.1-cp39-cp39-linux_armv7l.whl (12.3 MB) 2023-01-10T14:20:02,041 Collecting gast~=0.5.0 2023-01-10T14:20:02,072 Using cached https://www.piwheels.org/simple/gast/gast-0.5.3-py3-none-any.whl (19 kB) 2023-01-10T14:20:02,270 Collecting beniget~=0.4.0 2023-01-10T14:20:02,332 Using cached https://www.piwheels.org/simple/beniget/beniget-0.4.1-py3-none-any.whl (9.5 kB) 2023-01-10T14:20:02,422 Collecting ply>=3.4 2023-01-10T14:20:02,440 Using cached https://www.piwheels.org/simple/ply/ply-3.11-py2.py3-none-any.whl (49 kB) 2023-01-10T14:20:04,690 Installing collected packages: ply, wheel, setuptools, numpy, gast, Cython, scipy, beniget, pythran 2023-01-10T14:20:04,979 Creating /tmp/pip-build-env-jxzkmo3j/overlay/bin 2023-01-10T14:20:04,982 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/wheel to 755 2023-01-10T14:20:16,209 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/f2py to 755 2023-01-10T14:20:16,211 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/f2py3 to 755 2023-01-10T14:20:16,213 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/f2py3.9 to 755 2023-01-10T14:20:19,188 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/cygdb to 755 2023-01-10T14:20:19,190 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/cython to 755 2023-01-10T14:20:19,192 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/cythonize to 755 2023-01-10T14:20:46,314 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/pythran to 755 2023-01-10T14:20:46,316 changing mode of /tmp/pip-build-env-jxzkmo3j/overlay/bin/pythran-config to 755 2023-01-10T14:20:46,421 Successfully installed Cython-0.29.33 beniget-0.4.1 gast-0.5.3 numpy-1.24.1 ply-3.11 pythran-0.12.0 scipy-1.8.1 setuptools-65.6.3 wheel-0.38.4 2023-01-10T14:20:46,440 [notice] A new release of pip available: 22.3 -> 22.3.1 2023-01-10T14:20:46,440 [notice] To update, run: python3 -m pip install --upgrade pip 2023-01-10T14:20:46,890 Installing build dependencies: finished with status 'done' 2023-01-10T14:20:46,896 Getting requirements to build wheel: started 2023-01-10T14:20:46,897 Running command Getting requirements to build wheel 2023-01-10T14:20:48,911 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/tables.py:4555: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. (This may have returned Python scalars in past versions. 2023-01-10T14:20:48,912 obj = getattr(themodule, elem) 2023-01-10T14:21:02,202 Compiling DEGA/cython/estimateDispersion.pyx because it depends on /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/scipy/special/cython_special.pxd. 2023-01-10T14:21:02,202 Compiling DEGA/cython/negativeBinomialGLM.pyx because it depends on /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2023-01-10T14:21:02,202 [1/2] Cythonizing DEGA/cython/estimateDispersion.pyx 2023-01-10T14:21:02,202 [2/2] Cythonizing DEGA/cython/negativeBinomialGLM.pyx 2023-01-10T14:21:02,309 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:196: UserWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-01-10T14:21:02,310 warnings.warn(msg) 2023-01-10T14:21:02,420 running egg_info 2023-01-10T14:21:02,428 writing DEGA.egg-info/PKG-INFO 2023-01-10T14:21:02,432 writing dependency_links to DEGA.egg-info/dependency_links.txt 2023-01-10T14:21:02,435 writing requirements to DEGA.egg-info/requires.txt 2023-01-10T14:21:02,436 writing top-level names to DEGA.egg-info/top_level.txt 2023-01-10T14:21:02,469 reading manifest file 'DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:02,471 reading manifest template 'MANIFEST.in' 2023-01-10T14:21:02,479 warning: no previously-included files found matching 'DEGA/cython/setup.py' 2023-01-10T14:21:02,479 adding license file 'LICENSE' 2023-01-10T14:21:02,482 writing manifest file 'DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:03,323 Getting requirements to build wheel: finished with status 'done' 2023-01-10T14:21:03,336 Created temporary directory: /tmp/pip-modern-metadata-pmud_5dc 2023-01-10T14:21:03,339 Preparing metadata (pyproject.toml): started 2023-01-10T14:21:03,341 Running command Preparing metadata (pyproject.toml) 2023-01-10T14:21:05,137 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/tables.py:4555: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. (This may have returned Python scalars in past versions. 2023-01-10T14:21:05,138 obj = getattr(themodule, elem) 2023-01-10T14:21:06,898 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:196: UserWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-01-10T14:21:06,898 warnings.warn(msg) 2023-01-10T14:21:07,004 running dist_info 2023-01-10T14:21:07,013 creating /tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info 2023-01-10T14:21:07,019 writing /tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/PKG-INFO 2023-01-10T14:21:07,023 writing dependency_links to /tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/dependency_links.txt 2023-01-10T14:21:07,025 writing requirements to /tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/requires.txt 2023-01-10T14:21:07,026 writing top-level names to /tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/top_level.txt 2023-01-10T14:21:07,028 writing manifest file '/tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:07,057 reading manifest file '/tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:07,060 reading manifest template 'MANIFEST.in' 2023-01-10T14:21:07,067 warning: no previously-included files found matching 'DEGA/cython/setup.py' 2023-01-10T14:21:07,068 adding license file 'LICENSE' 2023-01-10T14:21:07,070 writing manifest file '/tmp/pip-modern-metadata-pmud_5dc/DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:07,071 creating '/tmp/pip-modern-metadata-pmud_5dc/DEGA-0.1.0.dist-info' 2023-01-10T14:21:07,631 Preparing metadata (pyproject.toml): finished with status 'done' 2023-01-10T14:21:07,642 Source in /tmp/pip-wheel-ml80p3am/dega_f811933b2ffe4158a30c52ab13d6597d has version 0.1.0, which satisfies requirement dega==0.1.0 from https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz 2023-01-10T14:21:07,643 Removed dega==0.1.0 from https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-fpxql6jd' 2023-01-10T14:21:07,653 Created temporary directory: /tmp/pip-unpack-nkenvtt9 2023-01-10T14:21:07,653 Building wheels for collected packages: dega 2023-01-10T14:21:07,658 Created temporary directory: /tmp/pip-wheel-nf5spbve 2023-01-10T14:21:07,658 Destination directory: /tmp/pip-wheel-nf5spbve 2023-01-10T14:21:07,660 Building wheel for dega (pyproject.toml): started 2023-01-10T14:21:07,661 Running command Building wheel for dega (pyproject.toml) 2023-01-10T14:21:09,327 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/tables.py:4555: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. (This may have returned Python scalars in past versions. 2023-01-10T14:21:09,328 obj = getattr(themodule, elem) 2023-01-10T14:21:11,012 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:196: UserWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-01-10T14:21:11,012 warnings.warn(msg) 2023-01-10T14:21:11,117 running bdist_wheel 2023-01-10T14:21:11,142 running build 2023-01-10T14:21:11,142 running build_py 2023-01-10T14:21:11,150 creating build 2023-01-10T14:21:11,150 creating build/lib.linux-armv7l-cpython-39 2023-01-10T14:21:11,151 creating build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,152 copying DEGA/__init__.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,155 copying DEGA/plots.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,158 copying DEGA/utils.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,160 copying DEGA/countsTranformers.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,162 copying DEGA/statisticalTests.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,165 copying DEGA/dispersions.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,167 copying DEGA/refit.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,170 copying DEGA/logger.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,172 copying DEGA/core.py -> build/lib.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,175 running egg_info 2023-01-10T14:21:11,191 writing DEGA.egg-info/PKG-INFO 2023-01-10T14:21:11,194 writing dependency_links to DEGA.egg-info/dependency_links.txt 2023-01-10T14:21:11,196 writing requirements to DEGA.egg-info/requires.txt 2023-01-10T14:21:11,197 writing top-level names to DEGA.egg-info/top_level.txt 2023-01-10T14:21:11,208 reading manifest file 'DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:11,210 reading manifest template 'MANIFEST.in' 2023-01-10T14:21:11,218 warning: no previously-included files found matching 'DEGA/cython/setup.py' 2023-01-10T14:21:11,218 adding license file 'LICENSE' 2023-01-10T14:21:11,220 writing manifest file 'DEGA.egg-info/SOURCES.txt' 2023-01-10T14:21:11,223 creating build/lib.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,224 copying DEGA/cython/estimateDispersion.cpp -> build/lib.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,274 copying DEGA/cython/estimateDispersion.pyx -> build/lib.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,277 copying DEGA/cython/negativeBinomialGLM.cpp -> build/lib.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,313 copying DEGA/cython/negativeBinomialGLM.pyx -> build/lib.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,317 running build_ext 2023-01-10T14:21:11,318 building 'DEGA.cython.estimateDispersion' extension 2023-01-10T14:21:11,325 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-10T14:21:11,325 creating build/temp.linux-armv7l-cpython-39 2023-01-10T14:21:11,326 creating build/temp.linux-armv7l-cpython-39/DEGA 2023-01-10T14:21:11,326 creating build/temp.linux-armv7l-cpython-39/DEGA/cython 2023-01-10T14:21:11,327 INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.9 -c' 2023-01-10T14:21:11,327 extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option' 2023-01-10T14:21:11,328 INFO: arm-linux-gnueabihf-gcc: DEGA/cython/estimateDispersion.cpp 2023-01-10T14:21:11,848 In file included from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-01-10T14:21:11,848 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-10T14:21:11,848 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-01-10T14:21:11,848 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/python/core.hpp:19, 2023-01-10T14:21:11,849 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/include/types/int.hpp:19, 2023-01-10T14:21:11,849 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/types/int.hpp:5, 2023-01-10T14:21:11,849 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/core.hpp:34, 2023-01-10T14:21:11,849 from DEGA/cython/estimateDispersion.cpp:783: 2023-01-10T14:21:11,849 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-10T14:21:11,849 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-01-10T14:21:11,849 | ^~~~~~~ 2023-01-10T14:22:46,084 cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics 2023-01-10T14:22:53,130 INFO: arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib -lblas -lblas -o build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all 2023-01-10T14:22:53,508 building 'DEGA.cython.negativeBinomialGLM' extension 2023-01-10T14:22:53,509 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-10T14:22:53,509 INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran -I/tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.9 -c' 2023-01-10T14:22:53,509 extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option' 2023-01-10T14:22:53,510 INFO: arm-linux-gnueabihf-gcc: DEGA/cython/negativeBinomialGLM.cpp 2023-01-10T14:22:53,957 In file included from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/python/core.hpp:19, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/include/types/int.hpp:19, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/types/int.hpp:5, 2023-01-10T14:22:53,958 from /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/pythran/pythonic/core.hpp:34, 2023-01-10T14:22:53,958 from DEGA/cython/negativeBinomialGLM.cpp:783: 2023-01-10T14:22:53,959 /tmp/pip-build-env-jxzkmo3j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-10T14:22:53,959 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-01-10T14:22:53,959 | ^~~~~~~ 2023-01-10T14:23:53,637 cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics 2023-01-10T14:23:56,835 INFO: arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib -lblas -lblas -o build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all 2023-01-10T14:23:57,174 installing to build/bdist.linux-armv7l/wheel 2023-01-10T14:23:57,174 running install 2023-01-10T14:23:57,200 running install_lib 2023-01-10T14:23:57,207 creating build/bdist.linux-armv7l 2023-01-10T14:23:57,208 creating build/bdist.linux-armv7l/wheel 2023-01-10T14:23:57,210 creating build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,211 copying build/lib.linux-armv7l-cpython-39/DEGA/__init__.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,213 copying build/lib.linux-armv7l-cpython-39/DEGA/plots.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,216 copying build/lib.linux-armv7l-cpython-39/DEGA/utils.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,218 copying build/lib.linux-armv7l-cpython-39/DEGA/countsTranformers.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,221 copying build/lib.linux-armv7l-cpython-39/DEGA/statisticalTests.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,224 creating build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,225 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,241 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,244 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,279 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,339 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,351 copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython 2023-01-10T14:23:57,354 copying build/lib.linux-armv7l-cpython-39/DEGA/dispersions.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,356 copying build/lib.linux-armv7l-cpython-39/DEGA/refit.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,359 copying build/lib.linux-armv7l-cpython-39/DEGA/logger.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,360 copying build/lib.linux-armv7l-cpython-39/DEGA/core.py -> build/bdist.linux-armv7l/wheel/DEGA 2023-01-10T14:23:57,364 running install_egg_info 2023-01-10T14:23:57,371 Copying DEGA.egg-info to build/bdist.linux-armv7l/wheel/DEGA-0.1.0-py3.9.egg-info 2023-01-10T14:23:57,383 running install_scripts 2023-01-10T14:23:57,448 creating build/bdist.linux-armv7l/wheel/DEGA-0.1.0.dist-info/WHEEL 2023-01-10T14:23:57,450 creating '/tmp/pip-wheel-nf5spbve/.tmp-4htm0ogr/DEGA-0.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-10T14:23:57,453 adding 'DEGA/__init__.py' 2023-01-10T14:23:57,460 adding 'DEGA/core.py' 2023-01-10T14:23:57,462 adding 'DEGA/countsTranformers.py' 2023-01-10T14:23:57,465 adding 'DEGA/dispersions.py' 2023-01-10T14:23:57,466 adding 'DEGA/logger.py' 2023-01-10T14:23:57,469 adding 'DEGA/plots.py' 2023-01-10T14:23:57,471 adding 'DEGA/refit.py' 2023-01-10T14:23:57,473 adding 'DEGA/statisticalTests.py' 2023-01-10T14:23:57,475 adding 'DEGA/utils.py' 2023-01-10T14:23:57,635 adding 'DEGA/cython/estimateDispersion.cpp' 2023-01-10T14:23:57,778 adding 'DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so' 2023-01-10T14:23:57,784 adding 'DEGA/cython/estimateDispersion.pyx' 2023-01-10T14:23:57,896 adding 'DEGA/cython/negativeBinomialGLM.cpp' 2023-01-10T14:23:57,991 adding 'DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so' 2023-01-10T14:23:57,997 adding 'DEGA/cython/negativeBinomialGLM.pyx' 2023-01-10T14:23:58,005 adding 'DEGA-0.1.0.dist-info/LICENSE' 2023-01-10T14:23:58,012 adding 'DEGA-0.1.0.dist-info/METADATA' 2023-01-10T14:23:58,013 adding 'DEGA-0.1.0.dist-info/WHEEL' 2023-01-10T14:23:58,014 adding 'DEGA-0.1.0.dist-info/top_level.txt' 2023-01-10T14:23:58,015 adding 'DEGA-0.1.0.dist-info/RECORD' 2023-01-10T14:23:58,032 removing build/bdist.linux-armv7l/wheel 2023-01-10T14:23:58,553 Building wheel for dega (pyproject.toml): finished with status 'done' 2023-01-10T14:23:58,583 Created wheel for dega: filename=DEGA-0.1.0-cp39-cp39-linux_armv7l.whl size=935418 sha256=dcd87bc3cb799a959d3e16c571f4c5d65f392971fc680e9005acb4161fe52dd9 2023-01-10T14:23:58,584 Stored in directory: /tmp/pip-ephem-wheel-cache-0cc9k8d3/wheels/63/f2/f7/53cdfac311a14804d30558da4213c86ffa530dffae5f58e482 2023-01-10T14:23:58,603 Successfully built dega 2023-01-10T14:23:58,640 Removed build tracker: '/tmp/pip-build-tracker-fpxql6jd'