2023-01-18T11:03:16,932 Created temporary directory: /tmp/pip-ephem-wheel-cache-du1mzqxp 2023-01-18T11:03:16,935 Created temporary directory: /tmp/pip-build-tracker-qhaov2qc 2023-01-18T11:03:16,935 Initialized build tracking at /tmp/pip-build-tracker-qhaov2qc 2023-01-18T11:03:16,935 Created build tracker: /tmp/pip-build-tracker-qhaov2qc 2023-01-18T11:03:16,935 Entered build tracker: /tmp/pip-build-tracker-qhaov2qc 2023-01-18T11:03:16,936 Created temporary directory: /tmp/pip-wheel-5lus17_6 2023-01-18T11:03:16,939 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-18T11:03:16,942 Created temporary directory: /tmp/pip-ephem-wheel-cache-uyv4orzn 2023-01-18T11:03:16,969 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-18T11:03:16,972 2 location(s) to search for versions of gimmemotifs: 2023-01-18T11:03:16,972 * https://pypi.org/simple/gimmemotifs/ 2023-01-18T11:03:16,972 * https://www.piwheels.org/simple/gimmemotifs/ 2023-01-18T11:03:16,972 Fetching project page and analyzing links: https://pypi.org/simple/gimmemotifs/ 2023-01-18T11:03:16,973 Getting page https://pypi.org/simple/gimmemotifs/ 2023-01-18T11:03:16,974 Found index url https://pypi.org/simple 2023-01-18T11:03:17,026 Fetched page https://pypi.org/simple/gimmemotifs/ as application/vnd.pypi.simple.v1+json 2023-01-18T11:03:17,031 Found link https://files.pythonhosted.org/packages/3b/66/216440ec9d7e3c075bd26b6ab13132bcebb42fc2dd20a8886a6bec347976/gimmemotifs-0.8.9.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.8.9.1 2023-01-18T11:03:17,032 Found link https://files.pythonhosted.org/packages/9a/64/35a8f9fdbf3d212a5a4a797bf862df63a3b53e1858b1d18480a4f7cfe1e6/gimmemotifs-0.9.0.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.2 2023-01-18T11:03:17,032 Found link https://files.pythonhosted.org/packages/65/94/7402fe33e86c472e392ac203838c4e6d2c07a3dc421998d5e1c38dbcdcac/gimmemotifs-0.9.0.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.3 2023-01-18T11:03:17,032 Found link https://files.pythonhosted.org/packages/99/73/fc665e610b200b170a2701ecb2d298b8f51c9792e44e12b47a803ed1cf9e/gimmemotifs-0.10.0b1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b1 2023-01-18T11:03:17,033 Found link https://files.pythonhosted.org/packages/e5/3a/cd3a48bbd49c2cdf325616da57ebe50b12135a4f60111cc4960573f29524/gimmemotifs-0.10.0b2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b2 2023-01-18T11:03:17,033 Found link https://files.pythonhosted.org/packages/98/be/6fdb2557d262d2dfd365fa8502205c6a1f72cfa8029d0d9c3fdb9420f3ff/gimmemotifs-0.10.0b4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b4 2023-01-18T11:03:17,033 Found link https://files.pythonhosted.org/packages/d3/83/2ffdbeb78227407f2ac3f4390f27257630709a3653a2c42926b181381f75/gimmemotifs-0.10.0b5.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b5 2023-01-18T11:03:17,033 Found link https://files.pythonhosted.org/packages/90/2c/f9493aeaaf1cf10742d7a7bf251dfbfe4a82d53f5222379b0466ac8cacfe/gimmemotifs-0.10.0b6.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b6 2023-01-18T11:03:17,034 Found link https://files.pythonhosted.org/packages/82/a3/34326512c0e9418729124bf9f5fd5da54a9792d5e99e84fe0653f3c38d2e/gimmemotifs-0.11.0b0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0b0 2023-01-18T11:03:17,034 Found link https://files.pythonhosted.org/packages/6c/b7/f04441424da981f03b69c21f2aa534aa4c6cee7aaea4a5e6b1887116bb08/gimmemotifs-0.11.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0 2023-01-18T11:03:17,034 Found link https://files.pythonhosted.org/packages/e9/c6/6b7e7069dbadc7d14ddab5483ef1c98e7532a3a92d66d89ef5cb59d0ac7a/gimmemotifs-0.11.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.1 2023-01-18T11:03:17,035 Found link https://files.pythonhosted.org/packages/53/5b/9251735efaf7a76ed7694c03a7a47cc21290f71d3958581a425da4682c47/gimmemotifs-0.12.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.12.0 2023-01-18T11:03:17,035 Found link https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.0 2023-01-18T11:03:17,035 Found link https://files.pythonhosted.org/packages/80/e9/84e4a077680c2c6e2baaca829ac660e910014c0aa57cd5dc915564a5a001/gimmemotifs-0.13.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.1 2023-01-18T11:03:17,035 Found link https://files.pythonhosted.org/packages/24/d1/8505a7798bf8e06f4a0b7a54b51bbcd9c9e5361d0dd1f3a89e78f2784c65/gimmemotifs-0.14.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.0 2023-01-18T11:03:17,036 Found link https://files.pythonhosted.org/packages/ef/4c/1a19f42d88f7fb47a1589a0c535a9dff9d75d1317a8a1a099ef0195348f9/gimmemotifs-0.14.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.2 2023-01-18T11:03:17,036 Found link https://files.pythonhosted.org/packages/1a/7d/113454d4ef0e960500067e0e4a0d0ed105318749c2e18f5be6542f22df48/gimmemotifs-0.14.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.3 2023-01-18T11:03:17,036 Found link https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.4 2023-01-18T11:03:17,036 Found link https://files.pythonhosted.org/packages/5f/d9/43302fdb777ca8bad9739d81804644090b25011be4a0d2f99188a8849b40/gimmemotifs-0.15.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.0 2023-01-18T11:03:17,037 Found link https://files.pythonhosted.org/packages/de/a5/9a3804dda5730092769519f38a7bc736488cff60cf7c8f0f2f71eeeca3e4/gimmemotifs-0.15.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.2 2023-01-18T11:03:17,037 Found link https://files.pythonhosted.org/packages/0c/bd/11e957138342aef4b2539818d1c548fce634e7b323961cdd9beedba3879c/gimmemotifs-0.15.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.3 2023-01-18T11:03:17,037 Found link https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.16.0 2023-01-18T11:03:17,038 Found link https://files.pythonhosted.org/packages/90/56/831b7548562dce57014d87dc9731c4b5ec0747c74ce2dd30966e2e812c5e/gimmemotifs-0.17.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.0 2023-01-18T11:03:17,038 Found link https://files.pythonhosted.org/packages/c5/c3/2dbd6363f025cf4b06d938479a9b35dab0ca91e59259b16e0bd6eef8bea0/gimmemotifs-0.17.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.2 2023-01-18T11:03:17,038 Found link https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.18.0 2023-01-18T11:03:17,038 Fetching project page and analyzing links: https://www.piwheels.org/simple/gimmemotifs/ 2023-01-18T11:03:17,039 Getting page https://www.piwheels.org/simple/gimmemotifs/ 2023-01-18T11:03:17,040 Found index url https://www.piwheels.org/simple 2023-01-18T11:03:17,210 Fetched page https://www.piwheels.org/simple/gimmemotifs/ as text/html 2023-01-18T11:03:17,231 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv7l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,232 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv6l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,232 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv7l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,232 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv6l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,232 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp37-cp37m-linux_armv7l.whl#sha256=d3ee204cf4cce000e45bd36d0f4b2c2ad56acaca7949242237d41320ab0b19d4 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,233 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp37-cp37m-linux_armv6l.whl#sha256=d3ee204cf4cce000e45bd36d0f4b2c2ad56acaca7949242237d41320ab0b19d4 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,233 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.0-cp39-cp39-linux_armv7l.whl#sha256=1839de9cf9404d7cf124991252941fa4a632733fc855deb6694f13ecf031fb86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,233 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.0-cp39-cp39-linux_armv6l.whl#sha256=1839de9cf9404d7cf124991252941fa4a632733fc855deb6694f13ecf031fb86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,233 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.0-cp37-cp37m-linux_armv7l.whl#sha256=a9afb01ba2fb87f62bcab7610512cb0ecf0035c2bd614c72d403aa53f1ff9140 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,233 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.0-cp37-cp37m-linux_armv6l.whl#sha256=a9afb01ba2fb87f62bcab7610512cb0ecf0035c2bd614c72d403aa53f1ff9140 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,234 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv7l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,234 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv6l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,234 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp37-cp37m-linux_armv7l.whl#sha256=18abd284f2b2bb7dadd8fd8d04aee0ae6f6f487512248746b3105b27d3521e42 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,234 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp37-cp37m-linux_armv6l.whl#sha256=18abd284f2b2bb7dadd8fd8d04aee0ae6f6f487512248746b3105b27d3521e42 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,234 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp35-cp35m-linux_armv7l.whl#sha256=fad8c8e93be58267276ab5e8d570d6cb4a9c25acf493352397b45282e9849eae (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,235 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp35-cp35m-linux_armv6l.whl#sha256=fad8c8e93be58267276ab5e8d570d6cb4a9c25acf493352397b45282e9849eae (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,235 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.15.3-cp39-cp39-linux_armv7l.whl#sha256=3536fdd0c1f50986f9bd4382c6f2f6b4c7185e87901b90e2a211ef6629680569 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,235 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.15.3-cp39-cp39-linux_armv6l.whl#sha256=3536fdd0c1f50986f9bd4382c6f2f6b4c7185e87901b90e2a211ef6629680569 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,235 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.15.3-cp37-cp37m-linux_armv7l.whl#sha256=a31ffa9319b2ff715b6db324e1031b9340f0e10c74b923dec6134671416d9dd8 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,235 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.15.3-cp37-cp37m-linux_armv6l.whl#sha256=a31ffa9319b2ff715b6db324e1031b9340f0e10c74b923dec6134671416d9dd8 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,236 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv7l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,247 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv6l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,247 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv7l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-01-18T11:03:17,248 Skipping link: not a file: https://www.piwheels.org/simple/gimmemotifs/ 2023-01-18T11:03:17,248 Skipping link: not a file: https://pypi.org/simple/gimmemotifs/ 2023-01-18T11:03:17,269 Given no hashes to check 1 links for project 'gimmemotifs': discarding no candidates 2023-01-18T11:03:17,286 Collecting gimmemotifs==0.18.0 2023-01-18T11:03:17,288 Created temporary directory: /tmp/pip-unpack-5147cgje 2023-01-18T11:03:17,340 Downloading gimmemotifs-0.18.0.tar.gz (12.2 MB) 2023-01-18T11:03:20,071 Added gimmemotifs==0.18.0 from https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz to build tracker '/tmp/pip-build-tracker-qhaov2qc' 2023-01-18T11:03:20,073 Running setup.py (path:/tmp/pip-wheel-5lus17_6/gimmemotifs_22ea8a1a458b47c581f10412c4fb7ded/setup.py) egg_info for package gimmemotifs 2023-01-18T11:03:20,074 Created temporary directory: /tmp/pip-pip-egg-info-8uyyin8c 2023-01-18T11:03:20,074 Preparing metadata (setup.py): started 2023-01-18T11:03:20,075 Running command python setup.py egg_info 2023-01-18T11:03:21,294 running egg_info 2023-01-18T11:03:21,296 creating /tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info 2023-01-18T11:03:21,320 writing /tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/PKG-INFO 2023-01-18T11:03:21,323 writing dependency_links to /tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/dependency_links.txt 2023-01-18T11:03:21,325 writing requirements to /tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/requires.txt 2023-01-18T11:03:21,326 writing top-level names to /tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/top_level.txt 2023-01-18T11:03:21,328 writing manifest file '/tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/SOURCES.txt' 2023-01-18T11:03:21,637 reading manifest file '/tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/SOURCES.txt' 2023-01-18T11:03:21,639 reading manifest template 'MANIFEST.in' 2023-01-18T11:03:21,641 no previously-included directories found matching 'test/' 2023-01-18T11:03:21,658 warning: no previously-included files found matching 'scripts/download_motif_databases.py' 2023-01-18T11:03:21,659 warning: no previously-included files found matching 'scripts/gimme_benchmark' 2023-01-18T11:03:21,659 adding license file 'COPYING' 2023-01-18T11:03:21,668 writing manifest file '/tmp/pip-pip-egg-info-8uyyin8c/gimmemotifs.egg-info/SOURCES.txt' 2023-01-18T11:03:21,794 Preparing metadata (setup.py): finished with status 'done' 2023-01-18T11:03:21,800 Source in /tmp/pip-wheel-5lus17_6/gimmemotifs_22ea8a1a458b47c581f10412c4fb7ded has version 0.18.0, which satisfies requirement gimmemotifs==0.18.0 from https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz 2023-01-18T11:03:21,801 Removed gimmemotifs==0.18.0 from https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz from build tracker '/tmp/pip-build-tracker-qhaov2qc' 2023-01-18T11:03:21,807 Created temporary directory: /tmp/pip-unpack-wgp_q_pq 2023-01-18T11:03:21,807 Building wheels for collected packages: gimmemotifs 2023-01-18T11:03:21,812 Created temporary directory: /tmp/pip-wheel-nl3hmwg0 2023-01-18T11:03:21,812 Building wheel for gimmemotifs (setup.py): started 2023-01-18T11:03:21,813 Destination directory: /tmp/pip-wheel-nl3hmwg0 2023-01-18T11:03:21,813 Running command python setup.py bdist_wheel 2023-01-18T11:03:23,022 running bdist_wheel 2023-01-18T11:03:23,301 running build 2023-01-18T11:03:23,302 running build_py 2023-01-18T11:03:23,302 creating build 2023-01-18T11:03:23,303 creating build/src 2023-01-18T11:03:23,304 copying src/COPYING -> build/src 2023-01-18T11:03:23,306 creating build/src/BioProspector 2023-01-18T11:03:23,307 copying src/BioProspector/COPYING -> build/src/BioProspector 2023-01-18T11:03:23,308 copying src/BioProspector/BioProspector.c -> build/src/BioProspector 2023-01-18T11:03:23,313 creating build/src/MotifSampler 2023-01-18T11:03:23,313 copying src/MotifSampler/CreateBackgroundModel_x86_64 -> build/src/MotifSampler 2023-01-18T11:03:23,347 copying src/MotifSampler/CreateBackgroundModel_i386 -> build/src/MotifSampler 2023-01-18T11:03:23,398 copying src/MotifSampler/MotifSampler_x86_64 -> build/src/MotifSampler 2023-01-18T11:03:23,434 copying src/MotifSampler/MotifSampler_i386 -> build/src/MotifSampler 2023-01-18T11:03:23,462 creating build/src/HMS 2023-01-18T11:03:23,463 copying src/HMS/theta3.txt -> build/src/HMS 2023-01-18T11:03:23,465 copying src/HMS/theta0.txt -> build/src/HMS 2023-01-18T11:03:23,466 copying src/HMS/theta2.txt -> build/src/HMS 2023-01-18T11:03:23,468 copying src/HMS/hms -> build/src/HMS 2023-01-18T11:03:23,472 copying src/HMS/theta1.txt -> build/src/HMS 2023-01-18T11:03:23,474 creating build/src/ChIPMunk 2023-01-18T11:03:23,475 copying src/ChIPMunk/chipmunk.jar -> build/src/ChIPMunk 2023-01-18T11:03:23,581 copying src/ChIPMunk/ChIPMunk.sh -> build/src/ChIPMunk 2023-01-18T11:03:23,583 creating build/src/MDmodule 2023-01-18T11:03:23,584 copying src/MDmodule/COPYING -> build/src/MDmodule 2023-01-18T11:03:23,586 copying src/MDmodule/MDmodule.c -> build/src/MDmodule 2023-01-18T11:03:23,590 creating build/src/posmo 2023-01-18T11:03:23,591 copying src/posmo/clusterwd -> build/src/posmo 2023-01-18T11:03:23,594 copying src/posmo/posmo -> build/src/posmo 2023-01-18T11:03:23,597 creating build/src/AMD 2023-01-18T11:03:23,598 copying src/AMD/AMD.bin -> build/src/AMD 2023-01-18T11:03:23,602 copying src/README -> build/src 2023-01-18T11:03:23,604 creating build/src/Improbizer 2023-01-18T11:03:23,605 copying src/Improbizer/ameme_i386 -> build/src/Improbizer 2023-01-18T11:03:23,614 copying src/Improbizer/ameme_x86_64 -> build/src/Improbizer 2023-01-18T11:03:23,625 creating build/lib.linux-armv7l-cpython-39 2023-01-18T11:03:23,626 creating build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:23,626 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:24,372 compiling BioProspector... ok 2023-01-18T11:03:25,108 compiling MDmodule... ok 2023-01-18T11:03:25,108 copying src/AMD/AMD.bin -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,114 copying build/src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,118 copying build/src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,121 copying src/posmo/posmo -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,125 copying src/posmo/clusterwd -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,128 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:25,129 copying build/src/ChIPMunk/chipmunk.jar -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:25,229 copying build/src/ChIPMunk/ChIPMunk.sh -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:25,231 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,233 copying build/src/HMS/theta3.txt -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,235 copying build/src/HMS/theta0.txt -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,237 copying build/src/HMS/theta2.txt -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,239 copying build/src/HMS/hms -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,244 copying build/src/HMS/theta1.txt -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS 2023-01-18T11:03:25,340 copying build/src/MotifSampler/MotifSampler_x86_64 -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/MotifSampler 2023-01-18T11:03:25,388 copying build/src/MotifSampler/CreateBackgroundModel_x86_64 -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/CreateBackgroundModel 2023-01-18T11:03:25,424 copying build/src/Improbizer/ameme_x86_64 -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ameme 2023-01-18T11:03:25,443 creating build/lib.linux-armv7l-cpython-39/data 2023-01-18T11:03:25,443 copying data/__init__.py -> build/lib.linux-armv7l-cpython-39/data 2023-01-18T11:03:25,446 copying gimmemotifs/_version.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,448 copying gimmemotifs/preprocessing.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,450 copying gimmemotifs/report.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,453 copying gimmemotifs/cli.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,456 copying gimmemotifs/background.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,459 copying gimmemotifs/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,461 copying gimmemotifs/utils.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,464 copying gimmemotifs/config.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,466 copying gimmemotifs/stats.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,469 copying gimmemotifs/fasta.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,471 copying gimmemotifs/comparison.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,475 copying gimmemotifs/rocmetrics.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,477 copying gimmemotifs/orthologs.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,480 copying gimmemotifs/plot.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:25,484 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,485 copying gimmemotifs/tools/trawler.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,487 copying gimmemotifs/tools/homer.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,489 copying gimmemotifs/tools/amd.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,491 copying gimmemotifs/tools/dinamo.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,493 copying gimmemotifs/tools/xxmotif.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,495 copying gimmemotifs/tools/jaspar.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,497 copying gimmemotifs/tools/prosampler.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,499 copying gimmemotifs/tools/weeder.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,501 copying gimmemotifs/tools/improbizer.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,503 copying gimmemotifs/tools/gadem.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,505 copying gimmemotifs/tools/motifprogram.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,507 copying gimmemotifs/tools/meme.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,509 copying gimmemotifs/tools/motifsampler.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,511 copying gimmemotifs/tools/yamda.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,513 copying gimmemotifs/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,515 copying gimmemotifs/tools/chipmunk.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,517 copying gimmemotifs/tools/rpmcmc.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,519 copying gimmemotifs/tools/dreme.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,521 copying gimmemotifs/tools/mdmodule.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,523 copying gimmemotifs/tools/posmo.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,525 copying gimmemotifs/tools/bioprospector.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,527 copying gimmemotifs/tools/memew.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,529 copying gimmemotifs/tools/hms.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/tools 2023-01-18T11:03:25,532 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,533 copying gimmemotifs/commands/motifs.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,536 copying gimmemotifs/commands/prediction.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,538 copying gimmemotifs/commands/match.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,540 copying gimmemotifs/commands/logo.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,542 copying gimmemotifs/commands/diff.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,544 copying gimmemotifs/commands/background.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,545 copying gimmemotifs/commands/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,547 copying gimmemotifs/commands/location.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,549 copying gimmemotifs/commands/motif2factors.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,551 copying gimmemotifs/commands/pfmscan.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,553 copying gimmemotifs/commands/threshold.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,555 copying gimmemotifs/commands/maelstrom.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,557 copying gimmemotifs/commands/cluster.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/commands 2023-01-18T11:03:25,560 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner 2023-01-18T11:03:25,561 copying gimmemotifs/scanner/base.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner 2023-01-18T11:03:25,564 copying gimmemotifs/scanner/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner 2023-01-18T11:03:25,566 copying gimmemotifs/scanner/utils.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner 2023-01-18T11:03:25,569 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom 2023-01-18T11:03:25,570 copying gimmemotifs/maelstrom/rank.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom 2023-01-18T11:03:25,573 copying gimmemotifs/maelstrom/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom 2023-01-18T11:03:25,576 copying gimmemotifs/maelstrom/moap.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom 2023-01-18T11:03:25,579 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,580 copying gimmemotifs/motif/validation.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,583 copying gimmemotifs/motif/read.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,585 copying gimmemotifs/motif/_plotting.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,588 copying gimmemotifs/motif/prediction.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,591 copying gimmemotifs/motif/_comparison.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,593 copying gimmemotifs/motif/base.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,596 copying gimmemotifs/motif/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,598 copying gimmemotifs/motif/_scanning.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,600 copying gimmemotifs/motif/denovo.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,604 copying gimmemotifs/motif/cluster.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/motif 2023-01-18T11:03:25,607 creating build/lib.linux-armv7l-cpython-39/gimmemotifs/db 2023-01-18T11:03:25,608 copying gimmemotifs/db/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/db 2023-01-18T11:03:25,612 copying gimmemotifs/included_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools 2023-01-18T11:03:25,613 running egg_info 2023-01-18T11:03:25,670 writing gimmemotifs.egg-info/PKG-INFO 2023-01-18T11:03:25,672 writing dependency_links to gimmemotifs.egg-info/dependency_links.txt 2023-01-18T11:03:25,675 writing requirements to gimmemotifs.egg-info/requires.txt 2023-01-18T11:03:25,676 writing top-level names to gimmemotifs.egg-info/top_level.txt 2023-01-18T11:03:25,710 reading manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-01-18T11:03:25,730 reading manifest template 'MANIFEST.in' 2023-01-18T11:03:25,732 no previously-included directories found matching 'test/' 2023-01-18T11:03:25,744 warning: no previously-included files found matching 'scripts/download_motif_databases.py' 2023-01-18T11:03:25,745 warning: no previously-included files found matching 'scripts/gimme_benchmark' 2023-01-18T11:03:25,745 adding license file 'COPYING' 2023-01-18T11:03:25,757 writing manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-01-18T11:03:25,760 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.__pycache__' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,760 !! 2023-01-18T11:03:25,761 ############################ 2023-01-18T11:03:25,761 # Package would be ignored # 2023-01-18T11:03:25,761 ############################ 2023-01-18T11:03:25,761 Python recognizes 'data.__pycache__' as an importable package, 2023-01-18T11:03:25,761 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,761 'data.__pycache__' has been automatically added to the distribution only 2023-01-18T11:03:25,761 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,761 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,762 Please make sure that 'data.__pycache__' is included as a package by using 2023-01-18T11:03:25,762 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,762 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,762 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,762 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,762 documentation page. 2023-01-18T11:03:25,763 !! 2023-01-18T11:03:25,763 check.warn(importable) 2023-01-18T11:03:25,763 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.bg' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,763 !! 2023-01-18T11:03:25,764 ############################ 2023-01-18T11:03:25,764 # Package would be ignored # 2023-01-18T11:03:25,764 ############################ 2023-01-18T11:03:25,764 Python recognizes 'data.bg' as an importable package, 2023-01-18T11:03:25,764 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,764 'data.bg' has been automatically added to the distribution only 2023-01-18T11:03:25,764 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,765 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,765 Please make sure that 'data.bg' is included as a package by using 2023-01-18T11:03:25,765 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,765 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,765 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,765 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,765 documentation page. 2023-01-18T11:03:25,766 !! 2023-01-18T11:03:25,766 check.warn(importable) 2023-01-18T11:03:25,766 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.cfg' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,766 !! 2023-01-18T11:03:25,767 ############################ 2023-01-18T11:03:25,767 # Package would be ignored # 2023-01-18T11:03:25,767 ############################ 2023-01-18T11:03:25,767 Python recognizes 'data.cfg' as an importable package, 2023-01-18T11:03:25,767 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,767 'data.cfg' has been automatically added to the distribution only 2023-01-18T11:03:25,767 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,767 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,768 Please make sure that 'data.cfg' is included as a package by using 2023-01-18T11:03:25,768 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,768 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,768 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,768 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,768 documentation page. 2023-01-18T11:03:25,769 !! 2023-01-18T11:03:25,769 check.warn(importable) 2023-01-18T11:03:25,769 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.examples' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,769 !! 2023-01-18T11:03:25,770 ############################ 2023-01-18T11:03:25,770 # Package would be ignored # 2023-01-18T11:03:25,770 ############################ 2023-01-18T11:03:25,770 Python recognizes 'data.examples' as an importable package, 2023-01-18T11:03:25,770 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,770 'data.examples' has been automatically added to the distribution only 2023-01-18T11:03:25,770 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,770 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,771 Please make sure that 'data.examples' is included as a package by using 2023-01-18T11:03:25,771 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,771 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,771 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,771 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,771 documentation page. 2023-01-18T11:03:25,772 !! 2023-01-18T11:03:25,772 check.warn(importable) 2023-01-18T11:03:25,772 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.motif_databases' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,772 !! 2023-01-18T11:03:25,772 ############################ 2023-01-18T11:03:25,773 # Package would be ignored # 2023-01-18T11:03:25,773 ############################ 2023-01-18T11:03:25,773 Python recognizes 'data.motif_databases' as an importable package, 2023-01-18T11:03:25,773 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,773 'data.motif_databases' has been automatically added to the distribution only 2023-01-18T11:03:25,773 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,773 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,774 Please make sure that 'data.motif_databases' is included as a package by using 2023-01-18T11:03:25,774 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,774 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,774 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,774 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,774 documentation page. 2023-01-18T11:03:25,775 !! 2023-01-18T11:03:25,775 check.warn(importable) 2023-01-18T11:03:25,775 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.score_dists' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,775 !! 2023-01-18T11:03:25,775 ############################ 2023-01-18T11:03:25,776 # Package would be ignored # 2023-01-18T11:03:25,776 ############################ 2023-01-18T11:03:25,776 Python recognizes 'data.score_dists' as an importable package, 2023-01-18T11:03:25,776 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,776 'data.score_dists' has been automatically added to the distribution only 2023-01-18T11:03:25,776 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,776 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,777 Please make sure that 'data.score_dists' is included as a package by using 2023-01-18T11:03:25,777 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,777 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,777 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,777 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,777 documentation page. 2023-01-18T11:03:25,778 !! 2023-01-18T11:03:25,778 check.warn(importable) 2023-01-18T11:03:25,778 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.templates' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,778 !! 2023-01-18T11:03:25,778 ############################ 2023-01-18T11:03:25,779 # Package would be ignored # 2023-01-18T11:03:25,779 ############################ 2023-01-18T11:03:25,779 Python recognizes 'data.templates' as an importable package, 2023-01-18T11:03:25,779 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,780 'data.templates' has been automatically added to the distribution only 2023-01-18T11:03:25,780 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,780 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,780 Please make sure that 'data.templates' is included as a package by using 2023-01-18T11:03:25,780 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,780 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,781 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,781 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,781 documentation page. 2023-01-18T11:03:25,782 !! 2023-01-18T11:03:25,782 check.warn(importable) 2023-01-18T11:03:25,782 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'data.templates.sortable' as data is deprecated, please list it in `packages`. 2023-01-18T11:03:25,782 !! 2023-01-18T11:03:25,783 ############################ 2023-01-18T11:03:25,783 # Package would be ignored # 2023-01-18T11:03:25,783 ############################ 2023-01-18T11:03:25,783 Python recognizes 'data.templates.sortable' as an importable package, 2023-01-18T11:03:25,783 but it is not listed in the `packages` configuration of setuptools. 2023-01-18T11:03:25,784 'data.templates.sortable' has been automatically added to the distribution only 2023-01-18T11:03:25,784 because it may contain data files, but this behavior is likely to change 2023-01-18T11:03:25,784 in future versions of setuptools (and therefore is considered deprecated). 2023-01-18T11:03:25,784 Please make sure that 'data.templates.sortable' is included as a package by using 2023-01-18T11:03:25,785 the `packages` configuration field or the proper discovery methods 2023-01-18T11:03:25,785 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-18T11:03:25,785 instead of `find_packages(...)`/`find:`). 2023-01-18T11:03:25,785 You can read more about "package discovery" and "data files" on setuptools 2023-01-18T11:03:25,785 documentation page. 2023-01-18T11:03:25,786 !! 2023-01-18T11:03:25,786 check.warn(importable) 2023-01-18T11:03:25,786 creating build/lib.linux-armv7l-cpython-39/data/__pycache__ 2023-01-18T11:03:25,787 copying data/__pycache__/__init__.cpython-310.pyc -> build/lib.linux-armv7l-cpython-39/data/__pycache__ 2023-01-18T11:03:25,787 creating build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,787 copying data/bg/hg18.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,787 copying data/bg/hg19.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,788 copying data/bg/hg38.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,791 copying data/bg/mm10.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,793 copying data/bg/mm9.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,795 copying data/bg/xenTro2.MotifSampler.bg -> build/lib.linux-armv7l-cpython-39/data/bg 2023-01-18T11:03:25,797 creating build/lib.linux-armv7l-cpython-39/data/cfg 2023-01-18T11:03:25,798 copying data/cfg/gimmemotifs.default.cfg -> build/lib.linux-armv7l-cpython-39/data/cfg 2023-01-18T11:03:25,800 creating build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,801 copying data/examples/Gm12878.CTCF.top500.w200.bed -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,805 copying data/examples/Gm12878.CTCF.top500.w200.fa -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,810 copying data/examples/MA0099.3.jaspar -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,812 copying data/examples/NRF1.bed -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,817 copying data/examples/TAp73alpha.bed -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,820 copying data/examples/TAp73alpha.fa -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,829 copying data/examples/example.pfm -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,832 copying data/examples/hg19.blood.most_variable.10k.txt -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,873 copying data/examples/hg19.blood.most_variable.1k.txt -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,881 copying data/examples/test.small.fa -> build/lib.linux-armv7l-cpython-39/data/examples 2023-01-18T11:03:25,883 creating build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:25,884 copying data/motif_databases/CIS-BP.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:25,917 copying data/motif_databases/CIS-BP.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,044 copying data/motif_databases/ENCODE.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,049 copying data/motif_databases/ENCODE.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,073 copying data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,076 copying data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,089 copying data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,092 copying data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,101 copying data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,104 copying data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,115 copying data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,118 copying data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,128 copying data/motif_databases/HOMER.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,130 copying data/motif_databases/HOMER.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,136 copying data/motif_databases/IMAGE.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,140 copying data/motif_databases/IMAGE.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,159 copying data/motif_databases/JASPAR2018.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,163 copying data/motif_databases/JASPAR2018.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,176 copying data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,179 copying data/motif_databases/JASPAR2018_fungi.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,183 copying data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,185 copying data/motif_databases/JASPAR2018_insects.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,188 copying data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,190 copying data/motif_databases/JASPAR2018_nematodes.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,193 copying data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,196 copying data/motif_databases/JASPAR2018_plants.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,204 copying data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,206 copying data/motif_databases/JASPAR2018_urochordates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,209 copying data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,212 copying data/motif_databases/JASPAR2018_vertebrates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,219 copying data/motif_databases/JASPAR2020.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,228 copying data/motif_databases/JASPAR2020.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,246 copying data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,249 copying data/motif_databases/JASPAR2020_fungi.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,254 copying data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,256 copying data/motif_databases/JASPAR2020_insects.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,260 copying data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,262 copying data/motif_databases/JASPAR2020_nematodes.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,265 copying data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,267 copying data/motif_databases/JASPAR2020_plants.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,275 copying data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,280 copying data/motif_databases/JASPAR2020_urochordates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,282 copying data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,286 copying data/motif_databases/JASPAR2020_vertebrates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,296 copying data/motif_databases/JASPAR2022.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,300 copying data/motif_databases/JASPAR2022.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,315 copying data/motif_databases/JASPAR2022_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,318 copying data/motif_databases/JASPAR2022_fungi.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,321 copying data/motif_databases/JASPAR2022_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,324 copying data/motif_databases/JASPAR2022_insects.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,327 copying data/motif_databases/JASPAR2022_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,329 copying data/motif_databases/JASPAR2022_nematodes.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,332 copying data/motif_databases/JASPAR2022_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,335 copying data/motif_databases/JASPAR2022_plants.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,342 copying data/motif_databases/JASPAR2022_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,345 copying data/motif_databases/JASPAR2022_urochordates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,348 copying data/motif_databases/JASPAR2022_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,352 copying data/motif_databases/JASPAR2022_vertebrates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,359 copying data/motif_databases/RSAT_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,362 copying data/motif_databases/RSAT_insects.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,366 copying data/motif_databases/RSAT_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,368 copying data/motif_databases/RSAT_plants.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,374 copying data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,376 copying data/motif_databases/RSAT_vertebrates.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,398 copying data/motif_databases/SwissRegulon.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,401 copying data/motif_databases/SwissRegulon.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,414 copying data/motif_databases/factorbook.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,418 copying data/motif_databases/factorbook.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,428 copying data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,438 copying data/motif_databases/gimme.plant.v1.0.pwm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,445 copying data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,461 copying data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,464 copying data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,479 copying data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,490 copying data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/lib.linux-armv7l-cpython-39/data/motif_databases 2023-01-18T11:03:26,509 creating build/lib.linux-armv7l-cpython-39/data/score_dists 2023-01-18T11:03:26,510 copying data/score_dists/dic2_bg_mean_sd.txt -> build/lib.linux-armv7l-cpython-39/data/score_dists 2023-01-18T11:03:26,513 copying data/score_dists/dic2_mean_sd.txt -> build/lib.linux-armv7l-cpython-39/data/score_dists 2023-01-18T11:03:26,516 copying data/score_dists/total_wic_mean_score_dist.txt -> build/lib.linux-armv7l-cpython-39/data/score_dists 2023-01-18T11:03:26,518 creating build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,519 copying data/templates/cluster_template.jinja.html -> build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,522 copying data/templates/report_template.jinja.html -> build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,525 copying data/templates/star.png -> build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,528 copying data/templates/star_silver.png -> build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,530 copying data/templates/table.tpl -> build/lib.linux-armv7l-cpython-39/data/templates 2023-01-18T11:03:26,533 creating build/lib.linux-armv7l-cpython-39/data/templates/sortable 2023-01-18T11:03:26,534 copying data/templates/sortable/sortable-theme-slick.css -> build/lib.linux-armv7l-cpython-39/data/templates/sortable 2023-01-18T11:03:26,536 copying data/templates/sortable/sortable.min.js -> build/lib.linux-armv7l-cpython-39/data/templates/sortable 2023-01-18T11:03:26,538 copying gimmemotifs/c_metrics.c -> build/lib.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:26,548 UPDATING build/lib.linux-armv7l-cpython-39/gimmemotifs/_version.py 2023-01-18T11:03:26,549 set build/lib.linux-armv7l-cpython-39/gimmemotifs/_version.py to '0.18.0' 2023-01-18T11:03:26,550 running build_ext 2023-01-18T11:03:26,556 building 'gimmemotifs.c_metrics' extension 2023-01-18T11:03:26,557 creating build/temp.linux-armv7l-cpython-39 2023-01-18T11:03:26,557 creating build/temp.linux-armv7l-cpython-39/gimmemotifs 2023-01-18T11:03:26,558 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c gimmemotifs/c_metrics.c -o build/temp.linux-armv7l-cpython-39/gimmemotifs/c_metrics.o 2023-01-18T11:03:26,960 gimmemotifs/c_metrics.c: In function ‘get_truncate_len’: 2023-01-18T11:03:26,960 gimmemotifs/c_metrics.c:315:5: warning: type of ‘len1’ defaults to ‘int’ [-Wimplicit-int] 2023-01-18T11:03:26,960 315 | int get_truncate_len(len1, len2, pos) { 2023-01-18T11:03:26,961 | ^~~~~~~~~~~~~~~~ 2023-01-18T11:03:26,961 gimmemotifs/c_metrics.c:315:5: warning: type of ‘len2’ defaults to ‘int’ [-Wimplicit-int] 2023-01-18T11:03:26,961 gimmemotifs/c_metrics.c:315:5: warning: type of ‘pos’ defaults to ‘int’ [-Wimplicit-int] 2023-01-18T11:03:26,967 gimmemotifs/c_metrics.c: In function ‘c_metrics_pwmscan’: 2023-01-18T11:03:26,967 gimmemotifs/c_metrics.c:564:9: warning: unused variable ‘pwm_min’ [-Wunused-variable] 2023-01-18T11:03:26,967 564 | double pwm_min = -50; 2023-01-18T11:03:26,968 | ^~~~~~~ 2023-01-18T11:03:26,968 gimmemotifs/c_metrics.c:563:6: warning: unused variable ‘c’ [-Wunused-variable] 2023-01-18T11:03:26,968 563 | int c; 2023-01-18T11:03:26,968 | ^ 2023-01-18T11:03:26,972 gimmemotifs/c_metrics.c: At top level: 2023-01-18T11:03:26,972 gimmemotifs/c_metrics.c:901:15: warning: initialization of ‘int’ from ‘void *’ makes integer from pointer without a cast [-Wint-conversion] 2023-01-18T11:03:26,972 901 | {NULL, NULL, NULL, 0, NULL} 2023-01-18T11:03:26,973 | ^~~~ 2023-01-18T11:03:26,973 gimmemotifs/c_metrics.c:901:15: note: (near initialization for ‘CoreMethods[4].ml_flags’) 2023-01-18T11:03:26,973 gimmemotifs/c_metrics.c:901:24: warning: excess elements in struct initializer 2023-01-18T11:03:26,974 901 | {NULL, NULL, NULL, 0, NULL} 2023-01-18T11:03:26,974 | ^~~~ 2023-01-18T11:03:26,974 gimmemotifs/c_metrics.c:901:24: note: (near initialization for ‘CoreMethods[4]’) 2023-01-18T11:03:28,155 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/gimmemotifs/c_metrics.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/gimmemotifs/c_metrics.cpython-39-arm-linux-gnueabihf.so 2023-01-18T11:03:28,259 running build_scripts 2023-01-18T11:03:28,260 creating build/scripts-3.9 2023-01-18T11:03:28,261 copying and adjusting scripts/gimme -> build/scripts-3.9 2023-01-18T11:03:28,263 copying and adjusting scripts/combine_peaks -> build/scripts-3.9 2023-01-18T11:03:28,264 copying and adjusting scripts/coverage_table -> build/scripts-3.9 2023-01-18T11:03:28,266 changing mode of build/scripts-3.9/gimme from 644 to 755 2023-01-18T11:03:28,266 changing mode of build/scripts-3.9/combine_peaks from 644 to 755 2023-01-18T11:03:28,266 changing mode of build/scripts-3.9/coverage_table from 644 to 755 2023-01-18T11:03:28,296 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-18T11:03:28,297 warnings.warn( 2023-01-18T11:03:28,321 installing to build/bdist.linux-armv7l/wheel 2023-01-18T11:03:28,321 running install 2023-01-18T11:03:28,347 running install_lib 2023-01-18T11:03:28,373 creating build/bdist.linux-armv7l 2023-01-18T11:03:28,374 creating build/bdist.linux-armv7l/wheel 2023-01-18T11:03:28,376 creating build/bdist.linux-armv7l/wheel/data 2023-01-18T11:03:28,377 creating build/bdist.linux-armv7l/wheel/data/cfg 2023-01-18T11:03:28,378 copying build/lib.linux-armv7l-cpython-39/data/cfg/gimmemotifs.default.cfg -> build/bdist.linux-armv7l/wheel/data/cfg 2023-01-18T11:03:28,380 copying build/lib.linux-armv7l-cpython-39/data/__init__.py -> build/bdist.linux-armv7l/wheel/data 2023-01-18T11:03:28,384 creating build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,385 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,399 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,401 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,403 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,424 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,428 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,430 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,433 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,437 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOMER.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,442 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,457 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,464 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,479 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,482 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,485 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,488 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,490 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,493 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,495 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,497 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/CIS-BP.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,569 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,578 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,581 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/factorbook.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,587 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,589 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,592 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,594 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,599 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.plant.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,603 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,609 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,613 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,616 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,625 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOMER.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,628 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,632 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,634 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,642 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,644 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,654 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,657 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,662 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,665 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,671 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,682 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,684 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/CIS-BP.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,706 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,708 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,712 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,715 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,717 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/ENCODE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,723 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,731 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/IMAGE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,738 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,754 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,764 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,772 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,775 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,779 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,787 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,790 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,793 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,795 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,797 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/SwissRegulon.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,805 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,807 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2022_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,809 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,812 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,814 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/IMAGE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,832 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,843 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,845 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/JASPAR2020_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,848 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/RSAT_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,871 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/SwissRegulon.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,874 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/ENCODE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,898 copying build/lib.linux-armv7l-cpython-39/data/motif_databases/factorbook.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-01-18T11:03:28,905 creating build/bdist.linux-armv7l/wheel/data/score_dists 2023-01-18T11:03:28,906 copying build/lib.linux-armv7l-cpython-39/data/score_dists/dic2_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-01-18T11:03:28,914 copying build/lib.linux-armv7l-cpython-39/data/score_dists/total_wic_mean_score_dist.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-01-18T11:03:28,916 copying build/lib.linux-armv7l-cpython-39/data/score_dists/dic2_bg_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-01-18T11:03:28,920 creating build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,921 copying build/lib.linux-armv7l-cpython-39/data/templates/star.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,924 creating build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-01-18T11:03:28,925 copying build/lib.linux-armv7l-cpython-39/data/templates/sortable/sortable-theme-slick.css -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-01-18T11:03:28,927 copying build/lib.linux-armv7l-cpython-39/data/templates/sortable/sortable.min.js -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-01-18T11:03:28,929 copying build/lib.linux-armv7l-cpython-39/data/templates/star_silver.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,932 copying build/lib.linux-armv7l-cpython-39/data/templates/cluster_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,935 copying build/lib.linux-armv7l-cpython-39/data/templates/table.tpl -> build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,938 copying build/lib.linux-armv7l-cpython-39/data/templates/report_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-01-18T11:03:28,941 creating build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,942 copying build/lib.linux-armv7l-cpython-39/data/examples/Gm12878.CTCF.top500.w200.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,945 copying build/lib.linux-armv7l-cpython-39/data/examples/hg19.blood.most_variable.10k.txt -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,978 copying build/lib.linux-armv7l-cpython-39/data/examples/TAp73alpha.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,981 copying build/lib.linux-armv7l-cpython-39/data/examples/test.small.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,983 copying build/lib.linux-armv7l-cpython-39/data/examples/NRF1.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,986 copying build/lib.linux-armv7l-cpython-39/data/examples/MA0099.3.jaspar -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,988 copying build/lib.linux-armv7l-cpython-39/data/examples/Gm12878.CTCF.top500.w200.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:28,994 copying build/lib.linux-armv7l-cpython-39/data/examples/TAp73alpha.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:29,004 copying build/lib.linux-armv7l-cpython-39/data/examples/example.pfm -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:29,006 copying build/lib.linux-armv7l-cpython-39/data/examples/hg19.blood.most_variable.1k.txt -> build/bdist.linux-armv7l/wheel/data/examples 2023-01-18T11:03:29,013 creating build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,014 copying build/lib.linux-armv7l-cpython-39/data/bg/mm10.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,016 copying build/lib.linux-armv7l-cpython-39/data/bg/hg38.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,019 copying build/lib.linux-armv7l-cpython-39/data/bg/hg18.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,021 copying build/lib.linux-armv7l-cpython-39/data/bg/xenTro2.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,023 copying build/lib.linux-armv7l-cpython-39/data/bg/hg19.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,025 copying build/lib.linux-armv7l-cpython-39/data/bg/mm9.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-01-18T11:03:29,028 creating build/bdist.linux-armv7l/wheel/data/__pycache__ 2023-01-18T11:03:29,029 copying build/lib.linux-armv7l-cpython-39/data/__pycache__/__init__.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/data/__pycache__ 2023-01-18T11:03:29,032 creating build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,033 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/c_metrics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,037 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/_version.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,040 creating build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,041 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/trawler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,043 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/homer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,045 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/amd.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,046 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/dinamo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,048 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/xxmotif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,050 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/jaspar.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,052 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/prosampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,053 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/weeder.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,055 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/improbizer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,057 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/gadem.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,059 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/motifprogram.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,061 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/meme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,063 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/motifsampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,065 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/yamda.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,067 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,069 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/chipmunk.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,071 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/rpmcmc.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,073 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/dreme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,075 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/mdmodule.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,077 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/posmo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,078 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/bioprospector.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,080 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/memew.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,082 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/tools/hms.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-01-18T11:03:29,084 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/preprocessing.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,086 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/report.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,090 creating build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,091 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/motifs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,095 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,099 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/match.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,102 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/logo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,105 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/diff.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,107 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,110 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,112 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/location.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,114 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/motif2factors.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,116 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/pfmscan.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,118 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/threshold.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,120 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,123 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/commands/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-01-18T11:03:29,125 creating build/bdist.linux-armv7l/wheel/gimmemotifs/scanner 2023-01-18T11:03:29,126 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner/base.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/scanner 2023-01-18T11:03:29,130 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/scanner 2023-01-18T11:03:29,133 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/scanner/utils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/scanner 2023-01-18T11:03:29,135 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/cli.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,143 creating build/bdist.linux-armv7l/wheel/gimmemotifs/maelstrom 2023-01-18T11:03:29,144 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom/rank.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/maelstrom 2023-01-18T11:03:29,146 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/maelstrom 2023-01-18T11:03:29,149 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/maelstrom/moap.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/maelstrom 2023-01-18T11:03:29,152 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,154 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,156 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/utils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,160 creating build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,161 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/validation.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,163 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/read.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,165 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/_plotting.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,168 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,170 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/_comparison.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,172 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/base.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,175 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,177 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/_scanning.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,179 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/denovo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,182 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/motif/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/motif 2023-01-18T11:03:29,185 creating build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-01-18T11:03:29,186 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/db/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-01-18T11:03:29,189 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/config.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,191 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/stats.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,194 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/fasta.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,196 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/comparison.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,199 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/rocmetrics.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,202 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/orthologs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,205 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/plot.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,207 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/c_metrics.c -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-01-18T11:03:29,211 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,212 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/clusterwd -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,215 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/BioProspector -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,219 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/MotifSampler -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,255 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/AMD.bin -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,260 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,261 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS/theta3.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,263 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS/theta0.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,264 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS/theta2.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,266 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS/hms -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,272 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/HMS/theta1.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-01-18T11:03:29,274 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:29,275 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ChIPMunk/chipmunk.jar -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:29,368 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-01-18T11:03:29,370 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/MDmodule -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,374 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,375 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/posmo -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,378 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/CreateBackgroundModel -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,442 copying build/lib.linux-armv7l-cpython-39/gimmemotifs/included_tools/ameme -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-01-18T11:03:29,453 running install_egg_info 2023-01-18T11:03:29,482 Copying gimmemotifs.egg-info to build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0-py3.9.egg-info 2023-01-18T11:03:29,494 running install_scripts 2023-01-18T11:03:29,579 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data 2023-01-18T11:03:29,579 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts 2023-01-18T11:03:29,581 copying build/scripts-3.9/gimme -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts 2023-01-18T11:03:29,583 copying build/scripts-3.9/combine_peaks -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts 2023-01-18T11:03:29,586 copying build/scripts-3.9/coverage_table -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts 2023-01-18T11:03:29,588 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts/gimme to 755 2023-01-18T11:03:29,588 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts/combine_peaks to 755 2023-01-18T11:03:29,589 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.data/scripts/coverage_table to 755 2023-01-18T11:03:29,665 adding license file "COPYING" (matched pattern "COPYING*") 2023-01-18T11:03:29,671 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.18.0.dist-info/WHEEL 2023-01-18T11:03:29,674 creating '/tmp/pip-wheel-nl3hmwg0/gimmemotifs-0.18.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-18T11:03:29,677 adding 'data/__init__.py' 2023-01-18T11:03:29,680 adding 'data/__pycache__/__init__.cpython-310.pyc' 2023-01-18T11:03:29,682 adding 'data/bg/hg18.MotifSampler.bg' 2023-01-18T11:03:29,683 adding 'data/bg/hg19.MotifSampler.bg' 2023-01-18T11:03:29,685 adding 'data/bg/hg38.MotifSampler.bg' 2023-01-18T11:03:29,686 adding 'data/bg/mm10.MotifSampler.bg' 2023-01-18T11:03:29,688 adding 'data/bg/mm9.MotifSampler.bg' 2023-01-18T11:03:29,689 adding 'data/bg/xenTro2.MotifSampler.bg' 2023-01-18T11:03:29,691 adding 'data/cfg/gimmemotifs.default.cfg' 2023-01-18T11:03:29,694 adding 'data/examples/Gm12878.CTCF.top500.w200.bed' 2023-01-18T11:03:29,750 adding 'data/examples/Gm12878.CTCF.top500.w200.fa' 2023-01-18T11:03:29,752 adding 'data/examples/MA0099.3.jaspar' 2023-01-18T11:03:29,757 adding 'data/examples/NRF1.bed' 2023-01-18T11:03:29,761 adding 'data/examples/TAp73alpha.bed' 2023-01-18T11:03:29,872 adding 'data/examples/TAp73alpha.fa' 2023-01-18T11:03:29,875 adding 'data/examples/example.pfm' 2023-01-18T11:03:30,184 adding 'data/examples/hg19.blood.most_variable.10k.txt' 2023-01-18T11:03:30,223 adding 'data/examples/hg19.blood.most_variable.1k.txt' 2023-01-18T11:03:30,225 adding 'data/examples/test.small.fa' 2023-01-18T11:03:30,271 adding 'data/motif_databases/CIS-BP.motif2factors.txt' 2023-01-18T11:03:31,110 adding 'data/motif_databases/CIS-BP.pfm' 2023-01-18T11:03:31,145 adding 'data/motif_databases/ENCODE.motif2factors.txt' 2023-01-18T11:03:31,361 adding 'data/motif_databases/ENCODE.pfm' 2023-01-18T11:03:31,371 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt' 2023-01-18T11:03:31,465 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.pfm' 2023-01-18T11:03:31,470 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt' 2023-01-18T11:03:31,533 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.pfm' 2023-01-18T11:03:31,538 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt' 2023-01-18T11:03:31,576 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.pfm' 2023-01-18T11:03:31,580 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt' 2023-01-18T11:03:31,612 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.pfm' 2023-01-18T11:03:31,618 adding 'data/motif_databases/HOMER.motif2factors.txt' 2023-01-18T11:03:31,657 adding 'data/motif_databases/HOMER.pfm' 2023-01-18T11:03:31,664 adding 'data/motif_databases/IMAGE.motif2factors.txt' 2023-01-18T11:03:31,842 adding 'data/motif_databases/IMAGE.pfm' 2023-01-18T11:03:31,855 adding 'data/motif_databases/JASPAR2018.motif2factors.txt' 2023-01-18T11:03:31,963 adding 'data/motif_databases/JASPAR2018.pfm' 2023-01-18T11:03:31,968 adding 'data/motif_databases/JASPAR2018_fungi.motif2factors.txt' 2023-01-18T11:03:31,978 adding 'data/motif_databases/JASPAR2018_fungi.pfm' 2023-01-18T11:03:31,981 adding 'data/motif_databases/JASPAR2018_insects.motif2factors.txt' 2023-01-18T11:03:31,987 adding 'data/motif_databases/JASPAR2018_insects.pfm' 2023-01-18T11:03:31,989 adding 'data/motif_databases/JASPAR2018_nematodes.motif2factors.txt' 2023-01-18T11:03:31,991 adding 'data/motif_databases/JASPAR2018_nematodes.pfm' 2023-01-18T11:03:31,994 adding 'data/motif_databases/JASPAR2018_plants.motif2factors.txt' 2023-01-18T11:03:32,035 adding 'data/motif_databases/JASPAR2018_plants.pfm' 2023-01-18T11:03:32,038 adding 'data/motif_databases/JASPAR2018_urochordates.motif2factors.txt' 2023-01-18T11:03:32,040 adding 'data/motif_databases/JASPAR2018_urochordates.pfm' 2023-01-18T11:03:32,043 adding 'data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt' 2023-01-18T11:03:32,093 adding 'data/motif_databases/JASPAR2018_vertebrates.pfm' 2023-01-18T11:03:32,107 adding 'data/motif_databases/JASPAR2020.motif2factors.txt' 2023-01-18T11:03:32,278 adding 'data/motif_databases/JASPAR2020.pfm' 2023-01-18T11:03:32,285 adding 'data/motif_databases/JASPAR2020_fungi.motif2factors.txt' 2023-01-18T11:03:32,299 adding 'data/motif_databases/JASPAR2020_fungi.pfm' 2023-01-18T11:03:32,301 adding 'data/motif_databases/JASPAR2020_insects.motif2factors.txt' 2023-01-18T11:03:32,308 adding 'data/motif_databases/JASPAR2020_insects.pfm' 2023-01-18T11:03:32,310 adding 'data/motif_databases/JASPAR2020_nematodes.motif2factors.txt' 2023-01-18T11:03:32,314 adding 'data/motif_databases/JASPAR2020_nematodes.pfm' 2023-01-18T11:03:32,318 adding 'data/motif_databases/JASPAR2020_plants.motif2factors.txt' 2023-01-18T11:03:32,372 adding 'data/motif_databases/JASPAR2020_plants.pfm' 2023-01-18T11:03:32,375 adding 'data/motif_databases/JASPAR2020_urochordates.motif2factors.txt' 2023-01-18T11:03:32,377 adding 'data/motif_databases/JASPAR2020_urochordates.pfm' 2023-01-18T11:03:32,383 adding 'data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt' 2023-01-18T11:03:32,474 adding 'data/motif_databases/JASPAR2020_vertebrates.pfm' 2023-01-18T11:03:32,495 adding 'data/motif_databases/JASPAR2022.motif2factors.txt' 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'data/motif_databases/JASPAR2022_vertebrates.motif2factors.txt' 2023-01-18T11:03:32,890 adding 'data/motif_databases/JASPAR2022_vertebrates.pfm' 2023-01-18T11:03:32,894 adding 'data/motif_databases/RSAT_insects.motif2factors.txt' 2023-01-18T11:03:32,920 adding 'data/motif_databases/RSAT_insects.pfm' 2023-01-18T11:03:32,922 adding 'data/motif_databases/RSAT_plants.motif2factors.txt' 2023-01-18T11:03:32,954 adding 'data/motif_databases/RSAT_plants.pfm' 2023-01-18T11:03:32,957 adding 'data/motif_databases/RSAT_vertebrates.motif2factors.txt' 2023-01-18T11:03:33,169 adding 'data/motif_databases/RSAT_vertebrates.pfm' 2023-01-18T11:03:33,178 adding 'data/motif_databases/SwissRegulon.motif2factors.txt' 2023-01-18T11:03:33,241 adding 'data/motif_databases/SwissRegulon.pfm' 2023-01-18T11:03:33,245 adding 'data/motif_databases/factorbook.motif2factors.txt' 2023-01-18T11:03:33,278 adding 'data/motif_databases/factorbook.pfm' 2023-01-18T11:03:33,312 adding 'data/motif_databases/gimme.invertebrate.v1.0.pwm' 2023-01-18T11:03:33,331 adding 'data/motif_databases/gimme.plant.v1.0.pwm' 2023-01-18T11:03:33,337 adding 'data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt' 2023-01-18T11:03:33,341 adding 'data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt' 2023-01-18T11:03:33,449 adding 'data/motif_databases/gimme.vertebrate.v3.1.pwm' 2023-01-18T11:03:33,481 adding 'data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt' 2023-01-18T11:03:33,652 adding 'data/motif_databases/gimme.vertebrate.v5.0.pfm' 2023-01-18T11:03:33,660 adding 'data/score_dists/dic2_bg_mean_sd.txt' 2023-01-18T11:03:33,662 adding 'data/score_dists/dic2_mean_sd.txt' 2023-01-18T11:03:33,664 adding 'data/score_dists/total_wic_mean_score_dist.txt' 2023-01-18T11:03:33,667 adding 'data/templates/cluster_template.jinja.html' 2023-01-18T11:03:33,669 adding 'data/templates/report_template.jinja.html' 2023-01-18T11:03:33,671 adding 'data/templates/star.png' 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'gimmemotifs-0.18.0.data/scripts/gimme' 2023-01-18T11:03:35,180 adding 'gimmemotifs-0.18.0.dist-info/COPYING' 2023-01-18T11:03:35,182 adding 'gimmemotifs-0.18.0.dist-info/METADATA' 2023-01-18T11:03:35,182 adding 'gimmemotifs-0.18.0.dist-info/WHEEL' 2023-01-18T11:03:35,183 adding 'gimmemotifs-0.18.0.dist-info/top_level.txt' 2023-01-18T11:03:35,187 adding 'gimmemotifs-0.18.0.dist-info/RECORD' 2023-01-18T11:03:35,356 removing build/bdist.linux-armv7l/wheel 2023-01-18T11:03:35,584 Building wheel for gimmemotifs (setup.py): finished with status 'done' 2023-01-18T11:03:35,707 Created wheel for gimmemotifs: filename=gimmemotifs-0.18.0-cp39-cp39-linux_armv7l.whl size=11228458 sha256=c12d64728ba85967129e8944ea53e685487283a4aa9d86599b1d0b154bfafd50 2023-01-18T11:03:35,708 Stored in directory: /tmp/pip-ephem-wheel-cache-uyv4orzn/wheels/8b/8d/e2/9a8b6f5fff9f9359376d8377901e96ace511efd5cf75cbb0a7 2023-01-18T11:03:35,733 Successfully built gimmemotifs 2023-01-18T11:03:36,051 Removed build tracker: '/tmp/pip-build-tracker-qhaov2qc'