2023-01-25T15:45:06,035 Created temporary directory: /tmp/pip-ephem-wheel-cache-7oez5s37 2023-01-25T15:45:06,040 Created temporary directory: /tmp/pip-build-tracker-wucqfqd3 2023-01-25T15:45:06,041 Initialized build tracking at /tmp/pip-build-tracker-wucqfqd3 2023-01-25T15:45:06,041 Created build tracker: /tmp/pip-build-tracker-wucqfqd3 2023-01-25T15:45:06,041 Entered build tracker: /tmp/pip-build-tracker-wucqfqd3 2023-01-25T15:45:06,043 Created temporary directory: /tmp/pip-wheel-kpv4bhjh 2023-01-25T15:45:06,051 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-25T15:45:06,056 Created temporary directory: /tmp/pip-ephem-wheel-cache-ex0cexdb 2023-01-25T15:45:06,107 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-25T15:45:06,114 2 location(s) to search for versions of amp-atomistics: 2023-01-25T15:45:06,114 * https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:45:06,114 * https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:45:06,115 Fetching project page and analyzing links: https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:45:06,116 Getting page https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:45:06,120 Found index url https://pypi.org/simple 2023-01-25T15:45:06,343 Fetched page https://pypi.org/simple/amp-atomistics/ as application/vnd.pypi.simple.v1+json 2023-01-25T15:45:06,346 Found link https://files.pythonhosted.org/packages/25/21/b65e16734d8e726581f4d8c9c76ad900b61dfd45fe33f00418727b57326b/amp-atomistics-0.6.1.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 0.6.1 2023-01-25T15:45:06,347 Found link https://files.pythonhosted.org/packages/2a/2a/a6a82f32a94dee78a29360920f536536a089ab9a61ef526bce8bd14745e1/amp-atomistics-1.0.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 1.0 2023-01-25T15:45:06,348 Found link https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 1.0.1 2023-01-25T15:45:06,349 Fetching project page and analyzing links: https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:45:06,349 Getting page https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:45:06,351 Found index url https://www.piwheels.org/simple 2023-01-25T15:45:06,573 Fetched page https://www.piwheels.org/simple/amp-atomistics/ as text/html 2023-01-25T15:45:06,583 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp39-cp39-linux_armv7l.whl#sha256=eb7fd88f4917f67a51c5565d1de81c2821fcc4371743208ab1ceda3c20ec654a (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,584 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp39-cp39-linux_armv6l.whl#sha256=eb7fd88f4917f67a51c5565d1de81c2821fcc4371743208ab1ceda3c20ec654a (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,585 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp37-cp37m-linux_armv7l.whl#sha256=d18037c33a19ba5c7cdfbd49324ed8db0d91eb49b20dcd9feb9b84cbf7018a14 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,585 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp37-cp37m-linux_armv6l.whl#sha256=d18037c33a19ba5c7cdfbd49324ed8db0d91eb49b20dcd9feb9b84cbf7018a14 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,586 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=7d1f92339e73d8adc0aefce75cc105c464381edcea4ac0c27485244ea37e3a74 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,586 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp39-cp39-linux_armv6l.whl#sha256=7d1f92339e73d8adc0aefce75cc105c464381edcea4ac0c27485244ea37e3a74 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,587 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=d85a9e06c69ac145c694ba2e038a07657e56ef2a5623499e529880caf5858ef4 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,587 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=d85a9e06c69ac145c694ba2e038a07657e56ef2a5623499e529880caf5858ef4 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,588 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp34-cp34m-linux_armv7l.whl#sha256=934e7405eeacc7a446eff3c519ed4a03ba3df347fe76f1425acdb2040e0f2985 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,588 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp34-cp34m-linux_armv6l.whl#sha256=934e7405eeacc7a446eff3c519ed4a03ba3df347fe76f1425acdb2040e0f2985 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,589 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp35-cp35m-linux_armv6l.whl#sha256=319fdeb8e2749626a9a22b17382ea52e60738cf8e136652671fa417a5d59eef5 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,589 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp35-cp35m-linux_armv7l.whl#sha256=319fdeb8e2749626a9a22b17382ea52e60738cf8e136652671fa417a5d59eef5 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:45:06,590 Skipping link: not a file: https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:45:06,591 Skipping link: not a file: https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:45:06,624 Given no hashes to check 1 links for project 'amp-atomistics': discarding no candidates 2023-01-25T15:45:06,654 Collecting amp-atomistics==1.0.1 2023-01-25T15:45:06,658 Created temporary directory: /tmp/pip-unpack-0fwvd27s 2023-01-25T15:45:07,049 Downloading amp-atomistics-1.0.1.tar.gz (162 kB) 2023-01-25T15:45:07,392 Added amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-wucqfqd3' 2023-01-25T15:45:07,395 Running setup.py (path:/tmp/pip-wheel-kpv4bhjh/amp-atomistics_f884bdf644874f958ce0cffae3c33bc5/setup.py) egg_info for package amp-atomistics 2023-01-25T15:45:07,396 Created temporary directory: /tmp/pip-pip-egg-info-1i4g5eg1 2023-01-25T15:45:07,397 Preparing metadata (setup.py): started 2023-01-25T15:45:07,399 Running command python setup.py egg_info 2023-01-25T15:45:11,569 running egg_info 2023-01-25T15:45:11,575 running build_src 2023-01-25T15:45:11,577 build_src 2023-01-25T15:45:11,577 building extension "amp.fmodules" sources 2023-01-25T15:45:11,577 f2py options: [] 2023-01-25T15:45:11,578 f2py:> build/src.linux-armv7l-3.7/amp/fmodulesmodule.c 2023-01-25T15:45:11,578 creating build 2023-01-25T15:45:11,579 creating build/src.linux-armv7l-3.7 2023-01-25T15:45:11,580 creating build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:18,550 Reading fortran codes... 2023-01-25T15:45:18,551 Reading file 'amp/model/neuralnetwork.f90' (format:fix) 2023-01-25T15:45:18,552 Line #17 in amp/model/neuralnetwork.f90:" type:: real_two_d_array " 2023-01-25T15:45:18,552 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,552 Line #22 in amp/model/neuralnetwork.f90:" type:: element_parameters " 2023-01-25T15:45:18,553 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,553 Line #29 in amp/model/neuralnetwork.f90:" type:: real_one_d_array " 2023-01-25T15:45:18,553 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,554 Reading file 'amp/descriptor/gaussian.f90' (format:free) 2023-01-25T15:45:18,554 Reading file 'amp/descriptor/cutoffs.f90' (format:fix) 2023-01-25T15:45:18,554 Reading file 'amp/descriptor/zernike.f90' (format:free) 2023-01-25T15:45:18,555 Reading file 'amp/model.f90' (format:fix) 2023-01-25T15:45:18,555 Line #105 in amp/model.f90:" type:: image_forces " 2023-01-25T15:45:18,555 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,556 Line #110 in amp/model.f90:" type:: integer_one_d_array " 2023-01-25T15:45:18,556 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,556 Line #115 in amp/model.f90:" type:: embedded_real_one_one_d_array " 2023-01-25T15:45:18,556 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,557 Line #120 in amp/model.f90:" type:: embedded_real_one_two_d_array " 2023-01-25T15:45:18,557 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,557 Line #125 in amp/model.f90:" type:: embedded_integer_one_one_d_array " 2023-01-25T15:45:18,558 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,558 Line #130 in amp/model.f90:" type:: embedded_one_one_two_d_array " 2023-01-25T15:45:18,558 analyzeline: No name/args pattern found for line. 2023-01-25T15:45:18,559 Post-processing... 2023-01-25T15:45:18,559 Block: fmodules 2023-01-25T15:45:18,559 Block: neuralnetwork 2023-01-25T15:45:18,560 Block: unknown_type 2023-01-25T15:45:18,560 Block: unknown_type 2023-01-25T15:45:18,560 Block: unknown_type 2023-01-25T15:45:18,560 Block: calculate_image_energy 2023-01-25T15:45:18,561 Block: calculate_atomic_energy 2023-01-25T15:45:18,561 Block: calculate_force_ 2023-01-25T15:45:18,561 Block: calculate_force 2023-01-25T15:45:18,561 Block: calculate_denergy_dparameters_ 2023-01-25T15:45:18,562 Block: calculate_datomicenergy_dparameters 2023-01-25T15:45:18,562 Block: calculate_dforce_dparameters_ 2023-01-25T15:45:18,562 Block: calculate_dforce_dparameters 2023-01-25T15:45:18,563 Block: calculate_g2 2023-01-25T15:45:18,563 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2 2023-01-25T15:45:18,563 get_useparameters: no module cutoffs info used by calculate_g2 2023-01-25T15:45:18,563 Block: calculate_g4 2023-01-25T15:45:18,564 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4 2023-01-25T15:45:18,564 get_useparameters: no module cutoffs info used by calculate_g4 2023-01-25T15:45:18,564 Block: calculate_g5 2023-01-25T15:45:18,565 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g5 2023-01-25T15:45:18,565 get_useparameters: no module cutoffs info used by calculate_g5 2023-01-25T15:45:18,565 Block: calculate_g2_prime 2023-01-25T15:45:18,565 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2_prime 2023-01-25T15:45:18,566 get_useparameters: no module cutoffs info used by calculate_g2_prime 2023-01-25T15:45:18,566 Block: calculate_g4_prime 2023-01-25T15:45:18,566 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4_prime 2023-01-25T15:45:18,567 get_useparameters: no module cutoffs info used by calculate_g4_prime 2023-01-25T15:45:18,567 Block: calculate_g5_prime 2023-01-25T15:45:18,567 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g5_prime 2023-01-25T15:45:18,567 get_useparameters: no module cutoffs info used by calculate_g5_prime 2023-01-25T15:45:18,568 Block: cutoffs 2023-01-25T15:45:18,568 Block: cutoff_fxn 2023-01-25T15:45:18,568 Block: cutoff_fxn_prime 2023-01-25T15:45:18,569 Block: calculate_zernike_prime 2023-01-25T15:45:18,569 Block: calculate_z 2023-01-25T15:45:18,569 Block: calculate_z_prime 2023-01-25T15:45:18,570 Block: calculate_q 2023-01-25T15:45:18,570 Block: binomial 2023-01-25T15:45:18,570 Block: check_version 2023-01-25T15:45:18,570 Block: fingerprint_props 2023-01-25T15:45:18,571 Block: model_props 2023-01-25T15:45:18,571 Block: images_props 2023-01-25T15:45:18,571 {} 2023-01-25T15:45:18,572 In: :fmodules:amp/model.f90:calculate_loss:calculate_energy 2023-01-25T15:45:18,572 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,572 {} 2023-01-25T15:45:18,572 In: :fmodules:amp/model.f90:calculate_loss:calculate_forces 2023-01-25T15:45:18,573 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,573 {} 2023-01-25T15:45:18,573 In: :fmodules:amp/model.f90:calculate_loss:calculate_denergy_dparameters 2023-01-25T15:45:18,574 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,574 {} 2023-01-25T15:45:18,574 In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_denergy_dparameters 2023-01-25T15:45:18,574 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,575 {} 2023-01-25T15:45:18,575 In: :fmodules:amp/model.f90:calculate_loss:calculate_dforces_dparameters 2023-01-25T15:45:18,575 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,576 {} 2023-01-25T15:45:18,576 In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_dforces_dparameters 2023-01-25T15:45:18,576 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:45:18,576 Block: calculate_loss 2023-01-25T15:45:18,577 Block: unknown_type 2023-01-25T15:45:18,577 Block: unknown_type 2023-01-25T15:45:18,577 Block: unknown_type 2023-01-25T15:45:18,577 Block: unknown_type 2023-01-25T15:45:18,578 Block: unknown_type 2023-01-25T15:45:18,578 Block: unknown_type 2023-01-25T15:45:18,578 Block: deallocate_variables 2023-01-25T15:45:18,579 Post-processing (stage 2)... 2023-01-25T15:45:18,579 Block: fmodules 2023-01-25T15:45:18,579 Block: unknown_interface 2023-01-25T15:45:18,580 Block: neuralnetwork 2023-01-25T15:45:18,580 Block: unknown_type 2023-01-25T15:45:18,580 Block: unknown_type 2023-01-25T15:45:18,580 Block: unknown_type 2023-01-25T15:45:18,581 Block: calculate_image_energy 2023-01-25T15:45:18,581 Block: calculate_atomic_energy 2023-01-25T15:45:18,581 Block: calculate_force_ 2023-01-25T15:45:18,582 Block: calculate_force 2023-01-25T15:45:18,582 Block: calculate_denergy_dparameters_ 2023-01-25T15:45:18,582 Block: calculate_datomicenergy_dparameters 2023-01-25T15:45:18,582 Block: calculate_dforce_dparameters_ 2023-01-25T15:45:18,583 Block: calculate_dforce_dparameters 2023-01-25T15:45:18,583 Block: calculate_g2 2023-01-25T15:45:18,583 Block: calculate_g4 2023-01-25T15:45:18,583 Block: calculate_g5 2023-01-25T15:45:18,584 Block: calculate_g2_prime 2023-01-25T15:45:18,584 Block: calculate_g4_prime 2023-01-25T15:45:18,584 Block: calculate_g5_prime 2023-01-25T15:45:18,585 Block: cutoffs 2023-01-25T15:45:18,585 Block: cutoff_fxn 2023-01-25T15:45:18,585 Block: cutoff_fxn_prime 2023-01-25T15:45:18,585 Block: calculate_zernike_prime 2023-01-25T15:45:18,586 Block: calculate_z 2023-01-25T15:45:18,586 Block: calculate_z_prime 2023-01-25T15:45:18,586 Block: calculate_q 2023-01-25T15:45:18,587 Block: binomial 2023-01-25T15:45:18,587 Block: check_version 2023-01-25T15:45:18,587 Block: fingerprint_props 2023-01-25T15:45:18,587 Block: model_props 2023-01-25T15:45:18,588 Block: images_props 2023-01-25T15:45:18,588 Block: calculate_loss 2023-01-25T15:45:18,588 Block: unknown_type 2023-01-25T15:45:18,589 Block: unknown_type 2023-01-25T15:45:18,589 Block: unknown_type 2023-01-25T15:45:18,589 Block: unknown_type 2023-01-25T15:45:18,589 Block: unknown_type 2023-01-25T15:45:18,590 Block: unknown_type 2023-01-25T15:45:18,590 Block: deallocate_variables 2023-01-25T15:45:18,590 Building modules... 2023-01-25T15:45:18,591 Building module "fmodules"... 2023-01-25T15:45:18,591 Constructing wrapper function "calculate_g2"... 2023-01-25T15:45:18,591 ridge = calculate_g2(neighbornumbers,neighborpositions,g_number,g_eta,rc,offset,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:45:18,591 Constructing wrapper function "calculate_g4"... 2023-01-25T15:45:18,592 ridge = calculate_g4(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:45:18,592 Constructing wrapper function "calculate_g5"... 2023-01-25T15:45:18,592 ridge = calculate_g5(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:45:18,593 Constructing wrapper function "calculate_g2_prime"... 2023-01-25T15:45:18,593 ridge = calculate_g2_prime(neighborindices,neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn_code,i,ri,m,l,offset,[p_gamma]) 2023-01-25T15:45:18,593 Constructing wrapper function "calculate_g4_prime"... 2023-01-25T15:45:18,593 ridge = calculate_g4_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,i,ri,m,l,[p_gamma]) 2023-01-25T15:45:18,594 Constructing wrapper function "calculate_g5_prime"... 2023-01-25T15:45:18,594 ridge = calculate_g5_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,i,ri,m,l,[p_gamma]) 2023-01-25T15:45:18,594 Constructing wrapper function "calculate_zernike_prime"... 2023-01-25T15:45:18,595 norm_prime = calculate_zernike_prime(n,l,n_indices,numbers,rs,g_numbers,cutoff,indexx,home,p,q,factorial,cutofffn_code,[n_length,fac_length,p_gamma]) 2023-01-25T15:45:18,595 Constructing wrapper function "calculate_z"... 2023-01-25T15:45:18,595 output = calculate_z(n,l,m,x,y,z,factorial,[length]) 2023-01-25T15:45:18,595 Constructing wrapper function "calculate_z_prime"... 2023-01-25T15:45:18,596 output = calculate_z_prime(n,l,m,x,y,z,p,factorial,[length]) 2023-01-25T15:45:18,596 Constructing wrapper function "calculate_q"... 2023-01-25T15:45:18,596 output = calculate_q(nu,k,l,factorial,[length]) 2023-01-25T15:45:18,597 Constructing wrapper function "binomial"... 2023-01-25T15:45:18,597 output = binomial(n,k,factorial,[length]) 2023-01-25T15:45:18,597 Constructing wrapper function "check_version"... 2023-01-25T15:45:18,597 warning = check_version(version) 2023-01-25T15:45:18,598 Constructing wrapper function "calculate_loss"... 2023-01-25T15:45:18,598 loss,dloss_dparameters,energyloss,forceloss,energy_maxresid,force_maxresid = calculate_loss(parameters,overfit_mask,lossprime,[num_parameters]) 2023-01-25T15:45:18,598 Constructing wrapper function "deallocate_variables"... 2023-01-25T15:45:18,599 deallocate_variables() 2023-01-25T15:45:18,599 Constructing F90 module support for "neuralnetwork"... 2023-01-25T15:45:18,599 Variables: min_fingerprints max_fingerprints no_layers_of_elements no_nodes_of_elements activation_signal 2023-01-25T15:45:18,599 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,601 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:18,601 f90mod_rules.buildhooks: skipping type unknown_type 2023-01-25T15:45:18,601 f90mod_rules.buildhooks: skipping type unknown_type 2023-01-25T15:45:18,602 f90mod_rules.buildhooks: skipping type unknown_type 2023-01-25T15:45:18,602 Creating wrapper for Fortran function "calculate_image_energy"("calculate_image_energy")... 2023-01-25T15:45:18,602 Constructing wrapper function "neuralnetwork.calculate_image_energy"... 2023-01-25T15:45:18,603 calculate_image_energy = calculate_image_energy(inputs,parameters,[num_inputs,num_parameters]) 2023-01-25T15:45:19,586 Creating wrapper for Fortran function "calculate_atomic_energy"("calculate_atomic_energy")... 2023-01-25T15:45:19,587 Constructing wrapper function "neuralnetwork.calculate_atomic_energy"... 2023-01-25T15:45:19,587 calculate_atomic_energy = calculate_atomic_energy(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:45:19,587 Creating wrapper for Fortran function "calculate_force_"("calculate_force_")... 2023-01-25T15:45:19,588 Constructing wrapper function "neuralnetwork.calculate_force_"... 2023-01-25T15:45:19,588 calculate_force_ = calculate_force_(inputs,inputs_,parameters,[num_inputs,num_parameters]) 2023-01-25T15:45:19,588 Creating wrapper for Fortran function "calculate_force"("calculate_force")... 2023-01-25T15:45:19,589 Constructing wrapper function "neuralnetwork.calculate_force"... 2023-01-25T15:45:19,589 calculate_force = calculate_force(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:45:19,589 Creating wrapper for Fortran function "calculate_denergy_dparameters_"("calculate_denergy_dparameters_")... 2023-01-25T15:45:19,589 Constructing wrapper function "neuralnetwork.calculate_denergy_dparameters_"... 2023-01-25T15:45:19,590 calculate_denergy_dparameters_ = calculate_denergy_dparameters_(inputs,parameters,[num_inputs,num_parameters]) 2023-01-25T15:45:19,590 Creating wrapper for Fortran function "calculate_datomicenergy_dparameters"("calculate_datomicenergy_dparameters")... 2023-01-25T15:45:19,590 Constructing wrapper function "neuralnetwork.calculate_datomicenergy_dparameters"... 2023-01-25T15:45:19,591 calculate_datomicenergy_dparameters = calculate_datomicenergy_dparameters(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:45:19,591 Creating wrapper for Fortran function "calculate_dforce_dparameters_"("calculate_dforce_dparameters_")... 2023-01-25T15:45:19,591 Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters_"... 2023-01-25T15:45:19,591 calculate_dforce_dparameters_ = calculate_dforce_dparameters_(inputs,inputs_,parameters,[num_inputs,num_parameters]) 2023-01-25T15:45:19,592 Creating wrapper for Fortran function "calculate_dforce_dparameters"("calculate_dforce_dparameters")... 2023-01-25T15:45:19,592 Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters"... 2023-01-25T15:45:19,592 calculate_dforce_dparameters = calculate_dforce_dparameters(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:45:19,593 Constructing F90 module support for "cutoffs"... 2023-01-25T15:45:19,593 Creating wrapper for Fortran function "cutoff_fxn"("cutoff_fxn")... 2023-01-25T15:45:19,593 Constructing wrapper function "cutoffs.cutoff_fxn"... 2023-01-25T15:45:19,593 cutoff_fxn = cutoff_fxn(r,rc,cutofffn_code,[p_gamma]) 2023-01-25T15:45:19,594 Creating wrapper for Fortran function "cutoff_fxn_prime"("cutoff_fxn_prime")... 2023-01-25T15:45:19,594 Constructing wrapper function "cutoffs.cutoff_fxn_prime"... 2023-01-25T15:45:19,594 cutoff_fxn_prime = cutoff_fxn_prime(r,rc,cutofffn_code,[p_gamma]) 2023-01-25T15:45:19,595 Constructing F90 module support for "fingerprint_props"... 2023-01-25T15:45:19,595 Variables: num_fingerprints_of_elements raveled_fingerprints raveled_fingerprintprimes 2023-01-25T15:45:19,595 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,595 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,596 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,596 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,596 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,597 Constructing F90 module support for "model_props"... 2023-01-25T15:45:19,597 Variables: mode_signal train_forces energy_coefficient force_coefficient overfit numericprime d 2023-01-25T15:45:19,597 Constructing F90 module support for "images_props"... 2023-01-25T15:45:19,598 Variables: num_images num_elements elements_numbers num_images_atoms atomic_numbers num_neighbors raveled_neighborlists is_nft nft_indices actual_energies image_weights actual_forces num_atoms atomic_positions 2023-01-25T15:45:19,598 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,598 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,599 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,599 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,599 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,600 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,601 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,601 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,601 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,602 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:45:19,602 Wrote C/API module "fmodules" to file "build/src.linux-armv7l-3.7/amp/fmodulesmodule.c" 2023-01-25T15:45:19,602 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90" 2023-01-25T15:45:19,603 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.c' to sources. 2023-01-25T15:45:19,603 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp' to include_dirs. 2023-01-25T15:45:19,603 creating build/src.linux-armv7l-3.7/build 2023-01-25T15:45:19,604 creating build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7 2023-01-25T15:45:19,604 creating build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:19,604 copying /usr/local/lib/python3.7/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:19,608 copying /usr/local/lib/python3.7/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:19,611 adding 'build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90' to sources. 2023-01-25T15:45:19,612 build_src: building npy-pkg config files 2023-01-25T15:45:19,669 creating /tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info 2023-01-25T15:45:19,763 writing /tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/PKG-INFO 2023-01-25T15:45:19,767 writing dependency_links to /tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/dependency_links.txt 2023-01-25T15:45:19,772 writing requirements to /tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/requires.txt 2023-01-25T15:45:19,774 writing top-level names to /tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/top_level.txt 2023-01-25T15:45:19,777 writing manifest file '/tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:45:19,811 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2023-01-25T15:45:19,811 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2023-01-25T15:45:19,904 reading manifest file '/tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:45:19,914 writing manifest file '/tmp/pip-pip-egg-info-1i4g5eg1/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:45:19,916 rmbadname1: Replacing "index" with "index_bn". 2023-01-25T15:45:19,917 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-25T15:45:19,917 setuptools.SetuptoolsDeprecationWarning, 2023-01-25T15:45:19,918 /usr/local/lib/python3.7/dist-packages/setuptools/command/egg_info.py:647: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2023-01-25T15:45:19,918 Please extend command classes from setuptools instead of distutils. 2023-01-25T15:45:19,918 SetuptoolsDeprecationWarning 2023-01-25T15:45:20,236 Preparing metadata (setup.py): finished with status 'done' 2023-01-25T15:45:20,249 Source in /tmp/pip-wheel-kpv4bhjh/amp-atomistics_f884bdf644874f958ce0cffae3c33bc5 has version 1.0.1, which satisfies requirement amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz 2023-01-25T15:45:20,250 Removed amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-wucqfqd3' 2023-01-25T15:45:20,261 Created temporary directory: /tmp/pip-unpack-_vvlo1jk 2023-01-25T15:45:20,262 Building wheels for collected packages: amp-atomistics 2023-01-25T15:45:20,271 Created temporary directory: /tmp/pip-wheel-edxcblm3 2023-01-25T15:45:20,272 Building wheel for amp-atomistics (setup.py): started 2023-01-25T15:45:20,274 Destination directory: /tmp/pip-wheel-edxcblm3 2023-01-25T15:45:20,275 Running command python setup.py bdist_wheel 2023-01-25T15:45:24,115 running bdist_wheel 2023-01-25T15:45:24,210 running build 2023-01-25T15:45:24,211 running config_cc 2023-01-25T15:45:24,212 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2023-01-25T15:45:24,213 running config_fc 2023-01-25T15:45:24,214 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2023-01-25T15:45:24,214 running build_src 2023-01-25T15:45:24,215 build_src 2023-01-25T15:45:24,216 building extension "amp.fmodules" sources 2023-01-25T15:45:24,217 f2py options: [] 2023-01-25T15:45:24,219 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.c' to sources. 2023-01-25T15:45:24,220 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp' to include_dirs. 2023-01-25T15:45:24,441 adding 'build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90' to sources. 2023-01-25T15:45:24,442 build_src: building npy-pkg config files 2023-01-25T15:45:24,444 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-25T15:45:24,445 setuptools.SetuptoolsDeprecationWarning, 2023-01-25T15:45:24,500 running build_py 2023-01-25T15:45:24,505 creating build/lib.linux-armv7l-cpython-37 2023-01-25T15:45:24,506 creating build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,509 copying amp/analysis.py -> build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,516 copying amp/convert.py -> build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,522 copying amp/utilities.py -> build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,529 copying amp/__init__.py -> build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,536 creating build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,537 copying amp/descriptor/zernike.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,544 copying amp/descriptor/gaussian.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,552 copying amp/descriptor/analysis.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,555 copying amp/descriptor/example.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,560 copying amp/descriptor/cutoffs.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,563 copying amp/descriptor/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,567 copying amp/descriptor/bispectrum.py -> build/lib.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:24,573 creating build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,575 copying amp/model/tflow.py -> build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,584 copying amp/model/kernelridge.py -> build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,594 copying amp/model/neuralnetwork.py -> build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,601 copying amp/model/__main__.py -> build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,605 copying amp/model/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:24,614 creating build/lib.linux-armv7l-cpython-37/amp/nft 2023-01-25T15:45:24,615 copying amp/nft/dft_jobs.py -> build/lib.linux-armv7l-cpython-37/amp/nft 2023-01-25T15:45:24,619 copying amp/nft/initialization.py -> build/lib.linux-armv7l-cpython-37/amp/nft 2023-01-25T15:45:24,623 copying amp/nft/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/nft 2023-01-25T15:45:24,626 copying amp/nft/activelearner.py -> build/lib.linux-armv7l-cpython-37/amp/nft 2023-01-25T15:45:24,632 creating build/lib.linux-armv7l-cpython-37/amp/preprocess 2023-01-25T15:45:24,633 copying amp/preprocess/image_selection.py -> build/lib.linux-armv7l-cpython-37/amp/preprocess 2023-01-25T15:45:24,638 copying amp/preprocess/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/preprocess 2023-01-25T15:45:24,640 copying amp/preprocess/feature_selection.py -> build/lib.linux-armv7l-cpython-37/amp/preprocess 2023-01-25T15:45:24,645 creating build/lib.linux-armv7l-cpython-37/amp/regression 2023-01-25T15:45:24,647 copying amp/regression/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/regression 2023-01-25T15:45:24,652 creating build/lib.linux-armv7l-cpython-37/amp/stats 2023-01-25T15:45:24,653 copying amp/stats/bootstrap.py -> build/lib.linux-armv7l-cpython-37/amp/stats 2023-01-25T15:45:24,659 copying amp/stats/__init__.py -> build/lib.linux-armv7l-cpython-37/amp/stats 2023-01-25T15:45:24,661 copying amp/VERSION -> build/lib.linux-armv7l-cpython-37/amp 2023-01-25T15:45:24,673 running build_ext 2023-01-25T15:45:24,709 customize UnixCCompiler 2023-01-25T15:45:24,712 customize UnixCCompiler using build_ext 2023-01-25T15:45:25,055 CCompilerOpt.cc_test_flags[1013] : testing flags (-march=native) 2023-01-25T15:45:25,056 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:25,058 creating /tmp/tmpuswkwon3/usr 2023-01-25T15:45:25,059 creating /tmp/tmpuswkwon3/usr/local 2023-01-25T15:45:25,060 creating /tmp/tmpuswkwon3/usr/local/lib 2023-01-25T15:45:25,061 creating /tmp/tmpuswkwon3/usr/local/lib/python3.7 2023-01-25T15:45:25,063 creating /tmp/tmpuswkwon3/usr/local/lib/python3.7/dist-packages 2023-01-25T15:45:25,064 creating /tmp/tmpuswkwon3/usr/local/lib/python3.7/dist-packages/numpy 2023-01-25T15:45:25,065 creating /tmp/tmpuswkwon3/usr/local/lib/python3.7/dist-packages/numpy/distutils 2023-01-25T15:45:25,066 creating /tmp/tmpuswkwon3/usr/local/lib/python3.7/dist-packages/numpy/distutils/checks 2023-01-25T15:45:25,067 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:25,068 extra options: '-march=native' 2023-01-25T15:45:25,315 CCompilerOpt.cc_test_flags[1013] : testing flags (-O3) 2023-01-25T15:45:25,316 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:25,316 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:25,317 extra options: '-O3' 2023-01-25T15:45:25,511 CCompilerOpt.cc_test_flags[1013] : testing flags (-Werror) 2023-01-25T15:45:25,511 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:25,512 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:25,512 extra options: '-Werror' 2023-01-25T15:45:25,708 CCompilerOpt.__init__[1701] : check requested baseline 2023-01-25T15:45:25,733 CCompilerOpt.__init__[1710] : check requested dispatch-able features 2023-01-25T15:45:25,761 CCompilerOpt.cc_test_flags[1013] : testing flags (-mfpu=neon) 2023-01-25T15:45:25,762 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:25,763 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:25,763 extra options: '-mfpu=neon' 2023-01-25T15:45:25,962 CCompilerOpt.feature_test[1468] : testing feature 'NEON' with flags (-mfpu=neon) 2023-01-25T15:45:25,963 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:25,964 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:25,964 extra options: '-mfpu=neon -Werror' 2023-01-25T15:45:26,761 CCompilerOpt.cc_test_flags[1013] : testing flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2023-01-25T15:45:26,762 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:26,762 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:26,763 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee' 2023-01-25T15:45:27,175 CCompilerOpt.feature_test[1468] : testing feature 'NEON_FP16' with flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2023-01-25T15:45:27,176 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:27,177 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:27,178 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee -Werror' 2023-01-25T15:45:28,024 CCompilerOpt.cc_test_flags[1013] : testing flags (-mfpu=neon-vfpv4) 2023-01-25T15:45:28,025 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:28,026 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:28,026 extra options: '-mfpu=neon-vfpv4' 2023-01-25T15:45:28,224 CCompilerOpt.feature_test[1468] : testing feature 'NEON_VFPV4' with flags (-mfp16-format=ieee -mfpu=neon-vfpv4) 2023-01-25T15:45:28,225 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:28,226 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:28,226 extra options: '-mfp16-format=ieee -mfpu=neon-vfpv4 -Werror' 2023-01-25T15:45:29,055 CCompilerOpt.cc_test_flags[1013] : testing flags (-mfpu=neon-fp-armv8 -march=armv8-a+simd) 2023-01-25T15:45:29,056 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:29,057 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:29,057 extra options: '-mfpu=neon-fp-armv8 -march=armv8-a+simd' 2023-01-25T15:45:29,258 CCompilerOpt.feature_test[1468] : testing feature 'ASIMD' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd) 2023-01-25T15:45:29,259 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:29,260 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:29,260 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd -Werror' 2023-01-25T15:45:30,151 CCompilerOpt.cc_test_flags[1013] : testing flags (-march=armv8.2-a+dotprod) 2023-01-25T15:45:30,152 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:30,153 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:30,153 extra options: '-march=armv8.2-a+dotprod' 2023-01-25T15:45:30,356 CCompilerOpt.feature_test[1468] : testing feature 'ASIMDDP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod) 2023-01-25T15:45:30,358 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:30,359 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:30,359 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror' 2023-01-25T15:45:31,222 CCompilerOpt.cc_test_flags[1013] : testing flags (-march=armv8.2-a+fp16) 2023-01-25T15:45:31,223 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:31,224 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:31,224 extra options: '-march=armv8.2-a+fp16' 2023-01-25T15:45:31,426 CCompilerOpt.feature_test[1468] : testing feature 'ASIMDHP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16) 2023-01-25T15:45:31,427 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:31,428 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:31,428 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16 -Werror' 2023-01-25T15:45:32,347 CCompilerOpt.cc_test_flags[1013] : testing flags (-march=armv8.2-a+fp16fml) 2023-01-25T15:45:32,348 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:32,349 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:32,349 extra options: '-march=armv8.2-a+fp16fml' 2023-01-25T15:45:32,549 CCompilerOpt.feature_test[1468] : testing feature 'ASIMDFHM' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml) 2023-01-25T15:45:32,550 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:32,551 compile options: '-I/usr/include/python3.7m -c' 2023-01-25T15:45:32,551 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror' 2023-01-25T15:45:33,464 CCompilerOpt.__init__[1726] : initialize targets groups 2023-01-25T15:45:33,489 CCompilerOpt.__init__[1728] : parse target group simd_test 2023-01-25T15:45:33,515 CCompilerOpt._parse_target_tokens[1941] : skip targets (VSX SSE42 AVX512F SSE2 (AVX2 FMA3) XOP AVX512_SKX FMA4 VSX2 VSX3) not part of baseline or dispatch-able features 2023-01-25T15:45:33,541 CCompilerOpt.generate_dispatch_header[2272] : generate CPU dispatch header: (build/src.linux-armv7l-3.7/numpy/distutils/include/npy_cpu_dispatch_config.h) 2023-01-25T15:45:33,565 CCompilerOpt.generate_dispatch_header[2283] : dispatch header dir build/src.linux-armv7l-3.7/numpy/distutils/include does not exist, creating it 2023-01-25T15:45:33,669 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2023-01-25T15:45:33,670 customize Gnu95FCompiler 2023-01-25T15:45:33,673 Found executable /usr/bin/gfortran 2023-01-25T15:45:33,786 customize Gnu95FCompiler 2023-01-25T15:45:33,897 customize Gnu95FCompiler using build_ext 2023-01-25T15:45:33,899 building 'amp.fmodules' extension 2023-01-25T15:45:33,929 compiling C sources 2023-01-25T15:45:33,930 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC 2023-01-25T15:45:33,932 creating build/temp.linux-armv7l-cpython-37/build 2023-01-25T15:45:33,934 creating build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7 2023-01-25T15:45:33,935 creating build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:33,938 creating build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/build 2023-01-25T15:45:33,939 creating build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7 2023-01-25T15:45:33,941 creating build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp 2023-01-25T15:45:33,943 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.7/numpy/distutils/include -I/usr/include/python3.7m -c' 2023-01-25T15:45:33,988 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/amp/fmodulesmodule.carm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.c 2023-01-25T15:45:34,706 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-01-25T15:45:34,706 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-25T15:45:34,707 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-01-25T15:45:34,707 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.h:13, 2023-01-25T15:45:34,707 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.c:2: 2023-01-25T15:45:34,708 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-25T15:45:34,708 #warning "Using deprecated NumPy API, disable it with " \ 2023-01-25T15:45:34,709 ^~~~~~~ 2023-01-25T15:45:34,727 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-01-25T15:45:34,728 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-25T15:45:34,728 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-01-25T15:45:34,729 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.h:13, 2023-01-25T15:45:34,729 from build/src.linux-armv7l-3.7/amp/fmodulesmodule.c:16: 2023-01-25T15:45:34,729 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-25T15:45:34,730 #warning "Using deprecated NumPy API, disable it with " \ 2023-01-25T15:45:34,730 ^~~~~~~ 2023-01-25T15:45:35,169 build/src.linux-armv7l-3.7/amp/fmodulesmodule.c:110:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2023-01-25T15:45:35,169 static int f2py_size(PyArrayObject* var, ...) 2023-01-25T15:45:35,170 ^~~~~~~~~ 2023-01-25T15:45:43,779 compiling Fortran 90 module sources 2023-01-25T15:45:43,781 creating build/temp.linux-armv7l-cpython-37/amp 2023-01-25T15:45:43,782 Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:45:43,783 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:45:43,783 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:45:43,784 creating build/temp.linux-armv7l-cpython-37/amp/model 2023-01-25T15:45:43,786 creating build/temp.linux-armv7l-cpython-37/amp/descriptor 2023-01-25T15:45:43,786 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.7/numpy/distutils/include -I/usr/include/python3.7m -c' 2023-01-25T15:45:43,787 extra options: '-Jbuild/temp.linux-armv7l-cpython-37/amp -Ibuild/temp.linux-armv7l-cpython-37/amp' 2023-01-25T15:45:43,789 gfortran:f90: amp/model/neuralnetwork.f90 2023-01-25T15:46:32,478 gfortran:f90: amp/descriptor/cutoffs.f90 2023-01-25T15:46:32,738 gfortran:f90: amp/model.f90 2023-01-25T15:46:53,356 compiling Fortran sources 2023-01-25T15:46:53,356 Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:46:53,357 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:46:53,357 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:46:53,359 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.7/numpy/distutils/include -I/usr/include/python3.7m -c' 2023-01-25T15:46:53,359 extra options: '-Jbuild/temp.linux-armv7l-cpython-37/amp -Ibuild/temp.linux-armv7l-cpython-37/amp' 2023-01-25T15:46:53,361 gfortran:f90: amp/descriptor/gaussian.f90 2023-01-25T15:46:56,102 gfortran:f90: amp/descriptor/zernike.f90 2023-01-25T15:46:57,832 gfortran:f90: build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90 2023-01-25T15:46:58,112 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:46:58,113 use neuralnetwork, only : min_fingerprints 2023-01-25T15:46:58,114 1 2023-01-25T15:46:58,114 Warning: Unused module variable ‘max_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,114 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:46:58,115 use neuralnetwork, only : min_fingerprints 2023-01-25T15:46:58,115 1 2023-01-25T15:46:58,116 Warning: Unused module variable ‘min_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,116 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:46:58,117 use neuralnetwork, only : min_fingerprints 2023-01-25T15:46:58,117 1 2023-01-25T15:46:58,117 Warning: Unused module variable ‘no_layers_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,118 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:46:58,119 use neuralnetwork, only : min_fingerprints 2023-01-25T15:46:58,119 1 2023-01-25T15:46:58,119 Warning: Unused module variable ‘no_nodes_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,125 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:46:58,125 use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:46:58,126 1 2023-01-25T15:46:58,126 Warning: Unused module variable ‘num_fingerprints_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,126 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:46:58,127 use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:46:58,127 1 2023-01-25T15:46:58,128 Warning: Unused module variable ‘raveled_fingerprintprimes’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,128 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:46:58,129 use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:46:58,130 1 2023-01-25T15:46:58,130 Warning: Unused module variable ‘raveled_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,143 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,144 use images_props, only : num_images 2023-01-25T15:46:58,144 1 2023-01-25T15:46:58,144 Warning: Unused module variable ‘actual_energies’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,145 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,146 use images_props, only : num_images 2023-01-25T15:46:58,146 1 2023-01-25T15:46:58,147 Warning: Unused module variable ‘actual_forces’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,147 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,148 use images_props, only : num_images 2023-01-25T15:46:58,149 1 2023-01-25T15:46:58,149 Warning: Unused module variable ‘atomic_numbers’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,149 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,150 use images_props, only : num_images 2023-01-25T15:46:58,150 1 2023-01-25T15:46:58,151 Warning: Unused module variable ‘atomic_positions’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,151 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,152 use images_props, only : num_images 2023-01-25T15:46:58,152 1 2023-01-25T15:46:58,152 Warning: Unused module variable ‘elements_numbers’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,152 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,153 use images_props, only : num_images 2023-01-25T15:46:58,153 1 2023-01-25T15:46:58,154 Warning: Unused module variable ‘image_weights’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,154 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,155 use images_props, only : num_images 2023-01-25T15:46:58,155 1 2023-01-25T15:46:58,155 Warning: Unused module variable ‘is_nft’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,156 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,156 use images_props, only : num_images 2023-01-25T15:46:58,156 1 2023-01-25T15:46:58,157 Warning: Unused module variable ‘nft_indices’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,157 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,158 use images_props, only : num_images 2023-01-25T15:46:58,158 1 2023-01-25T15:46:58,158 Warning: Unused module variable ‘num_images_atoms’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,159 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,159 use images_props, only : num_images 2023-01-25T15:46:58,160 1 2023-01-25T15:46:58,160 Warning: Unused module variable ‘num_neighbors’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:46:58,160 build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:46:58,161 use images_props, only : num_images 2023-01-25T15:46:58,161 1 2023-01-25T15:46:58,161 Warning: Unused module variable ‘raveled_neighborlists’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:47:00,603 /usr/bin/gfortran -Wall -g -Wall -g -shared build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/amp/fmodulesmodule.o build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/amp/fortranobject.o build/temp.linux-armv7l-cpython-37/amp/model/neuralnetwork.o build/temp.linux-armv7l-cpython-37/amp/descriptor/cutoffs.o build/temp.linux-armv7l-cpython-37/amp/model.o build/temp.linux-armv7l-cpython-37/amp/descriptor/gaussian.o build/temp.linux-armv7l-cpython-37/amp/descriptor/zernike.o build/temp.linux-armv7l-cpython-37/build/src.linux-armv7l-3.7/amp/fmodules-f2pywrappers2.o -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib -lgfortran -o build/lib.linux-armv7l-cpython-37/amp/fmodules.cpython-37m-arm-linux-gnueabihf.so 2023-01-25T15:47:11,066 running build_scripts 2023-01-25T15:47:11,068 creating build/scripts.linux-armv7l-3.7 2023-01-25T15:47:11,070 copying and adjusting tools/amp-compress -> build/scripts.linux-armv7l-3.7 2023-01-25T15:47:11,074 copying and adjusting tools/amp-plotconvergence -> build/scripts.linux-armv7l-3.7 2023-01-25T15:47:11,076 changing mode of build/scripts.linux-armv7l-3.7/amp-compress from 644 to 755 2023-01-25T15:47:11,077 changing mode of build/scripts.linux-armv7l-3.7/amp-plotconvergence from 644 to 755 2023-01-25T15:47:11,228 installing to build/bdist.linux-armv7l/wheel 2023-01-25T15:47:11,228 running install 2023-01-25T15:47:11,292 running install_lib 2023-01-25T15:47:11,388 creating build/bdist.linux-armv7l 2023-01-25T15:47:11,389 creating build/bdist.linux-armv7l/wheel 2023-01-25T15:47:11,392 creating build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,395 creating build/bdist.linux-armv7l/wheel/amp/regression 2023-01-25T15:47:11,397 copying build/lib.linux-armv7l-cpython-37/amp/regression/__init__.py -> build/bdist.linux-armv7l/wheel/amp/regression 2023-01-25T15:47:11,401 copying build/lib.linux-armv7l-cpython-37/amp/VERSION -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,406 creating build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,407 copying build/lib.linux-armv7l-cpython-37/amp/model/tflow.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,416 copying build/lib.linux-armv7l-cpython-37/amp/model/kernelridge.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,429 copying build/lib.linux-armv7l-cpython-37/amp/model/neuralnetwork.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,436 copying build/lib.linux-armv7l-cpython-37/amp/model/__main__.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,440 copying build/lib.linux-armv7l-cpython-37/amp/model/__init__.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:47:11,447 copying build/lib.linux-armv7l-cpython-37/amp/fmodules.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,494 copying build/lib.linux-armv7l-cpython-37/amp/analysis.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,499 copying build/lib.linux-armv7l-cpython-37/amp/convert.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,506 creating build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:47:11,507 copying build/lib.linux-armv7l-cpython-37/amp/preprocess/image_selection.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:47:11,512 copying build/lib.linux-armv7l-cpython-37/amp/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:47:11,515 copying build/lib.linux-armv7l-cpython-37/amp/preprocess/feature_selection.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:47:11,520 creating build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,522 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/zernike.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,529 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/gaussian.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,536 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/analysis.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,539 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/example.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,544 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/cutoffs.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,547 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/__init__.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,551 copying build/lib.linux-armv7l-cpython-37/amp/descriptor/bispectrum.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:47:11,557 copying build/lib.linux-armv7l-cpython-37/amp/utilities.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,566 copying build/lib.linux-armv7l-cpython-37/amp/__init__.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:47:11,572 creating build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:47:11,574 copying build/lib.linux-armv7l-cpython-37/amp/nft/dft_jobs.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:47:11,579 copying build/lib.linux-armv7l-cpython-37/amp/nft/initialization.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:47:11,584 copying build/lib.linux-armv7l-cpython-37/amp/nft/__init__.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:47:11,587 copying build/lib.linux-armv7l-cpython-37/amp/nft/activelearner.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:47:11,594 creating build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:47:11,596 copying build/lib.linux-armv7l-cpython-37/amp/stats/bootstrap.py -> build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:47:11,603 copying build/lib.linux-armv7l-cpython-37/amp/stats/__init__.py -> build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:47:11,606 running install_egg_info 2023-01-25T15:47:11,706 running egg_info 2023-01-25T15:47:11,708 creating amp_atomistics.egg-info 2023-01-25T15:47:11,801 writing amp_atomistics.egg-info/PKG-INFO 2023-01-25T15:47:11,805 writing dependency_links to amp_atomistics.egg-info/dependency_links.txt 2023-01-25T15:47:11,810 writing requirements to amp_atomistics.egg-info/requires.txt 2023-01-25T15:47:11,812 writing top-level names to amp_atomistics.egg-info/top_level.txt 2023-01-25T15:47:11,814 writing manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:47:11,839 /usr/local/lib/python3.7/dist-packages/setuptools/command/egg_info.py:647: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2023-01-25T15:47:11,840 Please extend command classes from setuptools instead of distutils. 2023-01-25T15:47:11,840 SetuptoolsDeprecationWarning 2023-01-25T15:47:11,937 reading manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:47:11,947 writing manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:47:11,950 Copying amp_atomistics.egg-info to build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1-py3.7.egg-info 2023-01-25T15:47:11,971 running install_scripts 2023-01-25T15:47:11,973 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data 2023-01-25T15:47:11,973 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:47:11,975 copying build/scripts.linux-armv7l-3.7/amp-compress -> build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:47:11,979 copying build/scripts.linux-armv7l-3.7/amp-plotconvergence -> build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:47:11,982 changing mode of build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts/amp-compress to 755 2023-01-25T15:47:11,982 changing mode of build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts/amp-plotconvergence to 755 2023-01-25T15:47:11,983 running install_clib 2023-01-25T15:47:11,983 customize UnixCCompiler 2023-01-25T15:47:12,096 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.dist-info/WHEEL 2023-01-25T15:47:12,101 creating '/tmp/pip-wheel-edxcblm3/amp_atomistics-1.0.1-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-25T15:47:12,106 adding 'amp/VERSION' 2023-01-25T15:47:12,114 adding 'amp/__init__.py' 2023-01-25T15:47:12,122 adding 'amp/analysis.py' 2023-01-25T15:47:12,130 adding 'amp/convert.py' 2023-01-25T15:47:12,513 adding 'amp/fmodules.cpython-37m-arm-linux-gnueabihf.so' 2023-01-25T15:47:12,548 adding 'amp/utilities.py' 2023-01-25T15:47:12,552 adding 'amp/descriptor/__init__.py' 2023-01-25T15:47:12,555 adding 'amp/descriptor/analysis.py' 2023-01-25T15:47:12,562 adding 'amp/descriptor/bispectrum.py' 2023-01-25T15:47:12,566 adding 'amp/descriptor/cutoffs.py' 2023-01-25T15:47:12,570 adding 'amp/descriptor/example.py' 2023-01-25T15:47:12,583 adding 'amp/descriptor/gaussian.py' 2023-01-25T15:47:12,593 adding 'amp/descriptor/zernike.py' 2023-01-25T15:47:12,609 adding 'amp/model/__init__.py' 2023-01-25T15:47:12,613 adding 'amp/model/__main__.py' 2023-01-25T15:47:12,643 adding 'amp/model/kernelridge.py' 2023-01-25T15:47:12,660 adding 'amp/model/neuralnetwork.py' 2023-01-25T15:47:12,679 adding 'amp/model/tflow.py' 2023-01-25T15:47:12,684 adding 'amp/nft/__init__.py' 2023-01-25T15:47:12,690 adding 'amp/nft/activelearner.py' 2023-01-25T15:47:12,694 adding 'amp/nft/dft_jobs.py' 2023-01-25T15:47:12,699 adding 'amp/nft/initialization.py' 2023-01-25T15:47:12,702 adding 'amp/preprocess/__init__.py' 2023-01-25T15:47:12,707 adding 'amp/preprocess/feature_selection.py' 2023-01-25T15:47:12,711 adding 'amp/preprocess/image_selection.py' 2023-01-25T15:47:12,715 adding 'amp/regression/__init__.py' 2023-01-25T15:47:12,718 adding 'amp/stats/__init__.py' 2023-01-25T15:47:12,725 adding 'amp/stats/bootstrap.py' 2023-01-25T15:47:12,730 adding 'amp_atomistics-1.0.1.data/scripts/amp-compress' 2023-01-25T15:47:12,733 adding 'amp_atomistics-1.0.1.data/scripts/amp-plotconvergence' 2023-01-25T15:47:12,737 adding 'amp_atomistics-1.0.1.dist-info/METADATA' 2023-01-25T15:47:12,739 adding 'amp_atomistics-1.0.1.dist-info/WHEEL' 2023-01-25T15:47:12,741 adding 'amp_atomistics-1.0.1.dist-info/top_level.txt' 2023-01-25T15:47:12,743 adding 'amp_atomistics-1.0.1.dist-info/RECORD' 2023-01-25T15:47:12,765 removing build/bdist.linux-armv7l/wheel 2023-01-25T15:47:12,794 ########### EXT COMPILER OPTIMIZATION ########### 2023-01-25T15:47:12,794 Platform : 2023-01-25T15:47:12,795 Architecture: armhf 2023-01-25T15:47:12,795 Compiler : gcc 2023-01-25T15:47:12,796 CPU baseline : 2023-01-25T15:47:12,796 Requested : 'min' 2023-01-25T15:47:12,796 Enabled : none 2023-01-25T15:47:12,797 Flags : none 2023-01-25T15:47:12,797 Extra checks: none 2023-01-25T15:47:12,798 CPU dispatch : 2023-01-25T15:47:12,798 Requested : 'max -xop -fma4' 2023-01-25T15:47:12,799 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP ASIMDDP ASIMDFHM 2023-01-25T15:47:12,799 Generated : none 2023-01-25T15:47:12,799 CCompilerOpt.cache_flush[809] : write cache to path -> /tmp/pip-wheel-kpv4bhjh/amp-atomistics_f884bdf644874f958ce0cffae3c33bc5/build/temp.linux-armv7l-cpython-37/ccompiler_opt_cache_ext.py 2023-01-25T15:47:13,175 Building wheel for amp-atomistics (setup.py): finished with status 'done' 2023-01-25T15:47:13,197 Created wheel for amp-atomistics: filename=amp_atomistics-1.0.1-cp37-cp37m-linux_armv7l.whl size=477975 sha256=d78b546c5b2223c3d2eb86e41b9f9f64eed7d089c514de76a8de79f27530c5e7 2023-01-25T15:47:13,199 Stored in directory: /tmp/pip-ephem-wheel-cache-ex0cexdb/wheels/2c/4b/85/da523a52c3e79c3c3388ce9c475011998ff0a02cbb5b6fc49c 2023-01-25T15:47:13,226 Successfully built amp-atomistics 2023-01-25T15:47:13,269 Removed build tracker: '/tmp/pip-build-tracker-wucqfqd3'