2023-01-25T15:57:49,933 Created temporary directory: /tmp/pip-ephem-wheel-cache-ezqzlxqm 2023-01-25T15:57:49,935 Created temporary directory: /tmp/pip-build-tracker-2jk7c391 2023-01-25T15:57:49,935 Initialized build tracking at /tmp/pip-build-tracker-2jk7c391 2023-01-25T15:57:49,935 Created build tracker: /tmp/pip-build-tracker-2jk7c391 2023-01-25T15:57:49,935 Entered build tracker: /tmp/pip-build-tracker-2jk7c391 2023-01-25T15:57:49,936 Created temporary directory: /tmp/pip-wheel-lw5gjgbj 2023-01-25T15:57:49,939 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-25T15:57:49,942 Created temporary directory: /tmp/pip-ephem-wheel-cache-2xesio61 2023-01-25T15:57:49,969 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-25T15:57:49,972 2 location(s) to search for versions of amp-atomistics: 2023-01-25T15:57:49,972 * https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:57:49,972 * https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:57:49,973 Fetching project page and analyzing links: https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:57:49,973 Getting page https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:57:49,974 Found index url https://pypi.org/simple 2023-01-25T15:57:50,027 Fetched page https://pypi.org/simple/amp-atomistics/ as application/vnd.pypi.simple.v1+json 2023-01-25T15:57:50,028 Found link https://files.pythonhosted.org/packages/25/21/b65e16734d8e726581f4d8c9c76ad900b61dfd45fe33f00418727b57326b/amp-atomistics-0.6.1.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 0.6.1 2023-01-25T15:57:50,029 Found link https://files.pythonhosted.org/packages/2a/2a/a6a82f32a94dee78a29360920f536536a089ab9a61ef526bce8bd14745e1/amp-atomistics-1.0.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 1.0 2023-01-25T15:57:50,029 Found link https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz (from https://pypi.org/simple/amp-atomistics/), version: 1.0.1 2023-01-25T15:57:50,030 Fetching project page and analyzing links: https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:57:50,030 Getting page https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:57:50,031 Found index url https://www.piwheels.org/simple 2023-01-25T15:57:50,216 Fetched page https://www.piwheels.org/simple/amp-atomistics/ as text/html 2023-01-25T15:57:50,221 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=d78b546c5b2223c3d2eb86e41b9f9f64eed7d089c514de76a8de79f27530c5e7 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,221 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=d78b546c5b2223c3d2eb86e41b9f9f64eed7d089c514de76a8de79f27530c5e7 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,222 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp39-cp39-linux_armv7l.whl#sha256=eb7fd88f4917f67a51c5565d1de81c2821fcc4371743208ab1ceda3c20ec654a (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,222 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp39-cp39-linux_armv6l.whl#sha256=eb7fd88f4917f67a51c5565d1de81c2821fcc4371743208ab1ceda3c20ec654a (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,222 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp37-cp37m-linux_armv7l.whl#sha256=d18037c33a19ba5c7cdfbd49324ed8db0d91eb49b20dcd9feb9b84cbf7018a14 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,223 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-1.0-cp37-cp37m-linux_armv6l.whl#sha256=d18037c33a19ba5c7cdfbd49324ed8db0d91eb49b20dcd9feb9b84cbf7018a14 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,223 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=7d1f92339e73d8adc0aefce75cc105c464381edcea4ac0c27485244ea37e3a74 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,223 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp39-cp39-linux_armv6l.whl#sha256=7d1f92339e73d8adc0aefce75cc105c464381edcea4ac0c27485244ea37e3a74 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,223 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=d85a9e06c69ac145c694ba2e038a07657e56ef2a5623499e529880caf5858ef4 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,223 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=d85a9e06c69ac145c694ba2e038a07657e56ef2a5623499e529880caf5858ef4 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,224 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp34-cp34m-linux_armv7l.whl#sha256=934e7405eeacc7a446eff3c519ed4a03ba3df347fe76f1425acdb2040e0f2985 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,224 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp34-cp34m-linux_armv6l.whl#sha256=934e7405eeacc7a446eff3c519ed4a03ba3df347fe76f1425acdb2040e0f2985 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,224 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp35-cp35m-linux_armv6l.whl#sha256=319fdeb8e2749626a9a22b17382ea52e60738cf8e136652671fa417a5d59eef5 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,224 Skipping link: No binaries permitted for amp-atomistics: https://www.piwheels.org/simple/amp-atomistics/amp_atomistics-0.6.1-cp35-cp35m-linux_armv7l.whl#sha256=319fdeb8e2749626a9a22b17382ea52e60738cf8e136652671fa417a5d59eef5 (from https://www.piwheels.org/simple/amp-atomistics/) 2023-01-25T15:57:50,225 Skipping link: not a file: https://www.piwheels.org/simple/amp-atomistics/ 2023-01-25T15:57:50,225 Skipping link: not a file: https://pypi.org/simple/amp-atomistics/ 2023-01-25T15:57:50,245 Given no hashes to check 1 links for project 'amp-atomistics': discarding no candidates 2023-01-25T15:57:50,263 Collecting amp-atomistics==1.0.1 2023-01-25T15:57:50,265 Created temporary directory: /tmp/pip-unpack-v4159j0p 2023-01-25T15:57:50,309 Downloading amp-atomistics-1.0.1.tar.gz (162 kB) 2023-01-25T15:57:50,470 Added amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-2jk7c391' 2023-01-25T15:57:50,471 Running setup.py (path:/tmp/pip-wheel-lw5gjgbj/amp-atomistics_ac7aeeaf74b84b13bec9bd6489d3026b/setup.py) egg_info for package amp-atomistics 2023-01-25T15:57:50,472 Created temporary directory: /tmp/pip-pip-egg-info-0so1kf4t 2023-01-25T15:57:50,472 Preparing metadata (setup.py): started 2023-01-25T15:57:50,473 Running command python setup.py egg_info 2023-01-25T15:57:51,711 /tmp/pip-wheel-lw5gjgbj/amp-atomistics_ac7aeeaf74b84b13bec9bd6489d3026b/setup.py:7: DeprecationWarning: 2023-01-25T15:57:51,712 `numpy.distutils` is deprecated since NumPy 1.23.0, as a result 2023-01-25T15:57:51,712 of the deprecation of `distutils` itself. It will be removed for 2023-01-25T15:57:51,713 Python >= 3.12. For older Python versions it will remain present. 2023-01-25T15:57:51,713 It is recommended to use `setuptools < 60.0` for those Python versions. 2023-01-25T15:57:51,713 For more details, see: 2023-01-25T15:57:51,713 https://numpy.org/devdocs/reference/distutils_status_migration.html 2023-01-25T15:57:51,714 from numpy.distutils.core import Extension, setup 2023-01-25T15:57:52,445 running egg_info 2023-01-25T15:57:52,450 running build_src 2023-01-25T15:57:52,450 INFO: build_src 2023-01-25T15:57:52,451 INFO: building extension "amp.fmodules" sources 2023-01-25T15:57:52,451 INFO: f2py options: [] 2023-01-25T15:57:52,451 INFO: f2py:> build/src.linux-armv7l-3.9/amp/fmodulesmodule.c 2023-01-25T15:57:52,451 creating build 2023-01-25T15:57:52,452 creating build/src.linux-armv7l-3.9 2023-01-25T15:57:52,452 creating build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:54,132 rmbadname1: Replacing "index" with "index_bn". 2023-01-25T15:57:55,477 Reading fortran codes... 2023-01-25T15:57:55,477 Reading file 'amp/model/neuralnetwork.f90' (format:fix) 2023-01-25T15:57:55,477 ::real_two_d_array 2023-01-25T15:57:55,477 ::element_parameters 2023-01-25T15:57:55,477 ::real_one_d_array 2023-01-25T15:57:55,477 Reading file 'amp/descriptor/gaussian.f90' (format:free) 2023-01-25T15:57:55,477 Reading file 'amp/descriptor/cutoffs.f90' (format:fix) 2023-01-25T15:57:55,478 Reading file 'amp/descriptor/zernike.f90' (format:free) 2023-01-25T15:57:55,478 Reading file 'amp/model.f90' (format:fix) 2023-01-25T15:57:55,478 ::image_forces 2023-01-25T15:57:55,478 ::integer_one_d_array 2023-01-25T15:57:55,478 ::embedded_real_one_one_d_array 2023-01-25T15:57:55,478 ::embedded_real_one_two_d_array 2023-01-25T15:57:55,478 ::embedded_integer_one_one_d_array 2023-01-25T15:57:55,479 ::embedded_one_one_two_d_array 2023-01-25T15:57:55,479 Post-processing... 2023-01-25T15:57:55,479 Block: fmodules 2023-01-25T15:57:55,479 Block: neuralnetwork 2023-01-25T15:57:55,479 Block: real_two_d_array 2023-01-25T15:57:55,479 Block: element_parameters 2023-01-25T15:57:55,479 Block: real_one_d_array 2023-01-25T15:57:55,480 Block: calculate_image_energy 2023-01-25T15:57:55,480 Block: calculate_atomic_energy 2023-01-25T15:57:55,480 Block: calculate_force_ 2023-01-25T15:57:55,480 Block: calculate_force 2023-01-25T15:57:55,480 Block: calculate_denergy_dparameters_ 2023-01-25T15:57:55,480 Block: calculate_datomicenergy_dparameters 2023-01-25T15:57:55,480 Block: calculate_dforce_dparameters_ 2023-01-25T15:57:55,480 Block: calculate_dforce_dparameters 2023-01-25T15:57:55,480 Block: calculate_g2 2023-01-25T15:57:55,481 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2 2023-01-25T15:57:55,481 get_useparameters: no module cutoffs info used by calculate_g2 2023-01-25T15:57:55,481 Block: calculate_g4 2023-01-25T15:57:55,481 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4 2023-01-25T15:57:55,481 get_useparameters: no module cutoffs info used by calculate_g4 2023-01-25T15:57:55,481 Block: calculate_g5 2023-01-25T15:57:55,481 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g5 2023-01-25T15:57:55,481 get_useparameters: no module cutoffs info used by calculate_g5 2023-01-25T15:57:55,481 Block: calculate_g2_prime 2023-01-25T15:57:55,482 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2_prime 2023-01-25T15:57:55,482 get_useparameters: no module cutoffs info used by calculate_g2_prime 2023-01-25T15:57:55,482 Block: calculate_g4_prime 2023-01-25T15:57:55,482 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4_prime 2023-01-25T15:57:55,482 get_useparameters: no module cutoffs info used by calculate_g4_prime 2023-01-25T15:57:55,482 Block: calculate_g5_prime 2023-01-25T15:57:55,482 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g5_prime 2023-01-25T15:57:55,482 get_useparameters: no module cutoffs info used by calculate_g5_prime 2023-01-25T15:57:55,482 Block: cutoffs 2023-01-25T15:57:55,483 Block: cutoff_fxn 2023-01-25T15:57:55,483 Block: cutoff_fxn_prime 2023-01-25T15:57:55,483 Block: calculate_zernike_prime 2023-01-25T15:57:55,483 Block: calculate_z 2023-01-25T15:57:55,483 Block: calculate_z_prime 2023-01-25T15:57:55,483 Block: calculate_q 2023-01-25T15:57:55,483 Block: binomial 2023-01-25T15:57:55,483 Block: check_version 2023-01-25T15:57:55,483 Block: fingerprint_props 2023-01-25T15:57:55,484 Block: model_props 2023-01-25T15:57:55,484 Block: images_props 2023-01-25T15:57:55,484 {} 2023-01-25T15:57:55,484 In: :fmodules:amp/model.f90:calculate_loss:calculate_energy 2023-01-25T15:57:55,484 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,484 {} 2023-01-25T15:57:55,484 In: :fmodules:amp/model.f90:calculate_loss:calculate_forces 2023-01-25T15:57:55,484 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,485 {} 2023-01-25T15:57:55,485 In: :fmodules:amp/model.f90:calculate_loss:calculate_denergy_dparameters 2023-01-25T15:57:55,485 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,485 {} 2023-01-25T15:57:55,485 In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_denergy_dparameters 2023-01-25T15:57:55,485 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,485 {} 2023-01-25T15:57:55,485 In: :fmodules:amp/model.f90:calculate_loss:calculate_dforces_dparameters 2023-01-25T15:57:55,485 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,486 {} 2023-01-25T15:57:55,486 In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_dforces_dparameters 2023-01-25T15:57:55,486 vars2fortran: No typespec for argument "image_no". 2023-01-25T15:57:55,486 Block: calculate_loss 2023-01-25T15:57:55,486 Block: image_forces 2023-01-25T15:57:55,486 Block: integer_one_d_array 2023-01-25T15:57:55,486 Block: embedded_real_one_one_d_array 2023-01-25T15:57:55,486 Block: embedded_real_one_two_d_array 2023-01-25T15:57:55,486 Block: embedded_integer_one_one_d_array 2023-01-25T15:57:55,487 Block: embedded_one_one_two_d_array 2023-01-25T15:57:55,487 Block: deallocate_variables 2023-01-25T15:57:55,487 Post-processing (stage 2)... 2023-01-25T15:57:55,487 Block: fmodules 2023-01-25T15:57:55,487 Block: unknown_interface 2023-01-25T15:57:55,487 Block: neuralnetwork 2023-01-25T15:57:55,487 Block: real_two_d_array 2023-01-25T15:57:55,487 Block: element_parameters 2023-01-25T15:57:55,487 Block: real_one_d_array 2023-01-25T15:57:55,488 Block: calculate_image_energy 2023-01-25T15:57:55,488 Block: calculate_atomic_energy 2023-01-25T15:57:55,488 Block: calculate_force_ 2023-01-25T15:57:55,488 Block: calculate_force 2023-01-25T15:57:55,488 Block: calculate_denergy_dparameters_ 2023-01-25T15:57:55,488 Block: calculate_datomicenergy_dparameters 2023-01-25T15:57:55,488 Block: calculate_dforce_dparameters_ 2023-01-25T15:57:55,488 Block: calculate_dforce_dparameters 2023-01-25T15:57:55,488 Block: calculate_g2 2023-01-25T15:57:55,489 Block: calculate_g4 2023-01-25T15:57:55,489 Block: calculate_g5 2023-01-25T15:57:55,489 Block: calculate_g2_prime 2023-01-25T15:57:55,489 Block: calculate_g4_prime 2023-01-25T15:57:55,489 Block: calculate_g5_prime 2023-01-25T15:57:55,489 Block: cutoffs 2023-01-25T15:57:55,489 Block: cutoff_fxn 2023-01-25T15:57:55,489 Block: cutoff_fxn_prime 2023-01-25T15:57:55,490 Block: calculate_zernike_prime 2023-01-25T15:57:55,490 Block: calculate_z 2023-01-25T15:57:55,490 Block: calculate_z_prime 2023-01-25T15:57:55,490 Block: calculate_q 2023-01-25T15:57:55,490 Block: binomial 2023-01-25T15:57:55,490 Block: check_version 2023-01-25T15:57:55,490 Block: fingerprint_props 2023-01-25T15:57:55,490 Block: model_props 2023-01-25T15:57:55,490 Block: images_props 2023-01-25T15:57:55,491 Block: calculate_loss 2023-01-25T15:57:55,491 Block: image_forces 2023-01-25T15:57:55,491 Block: integer_one_d_array 2023-01-25T15:57:55,491 Block: embedded_real_one_one_d_array 2023-01-25T15:57:55,491 Block: embedded_real_one_two_d_array 2023-01-25T15:57:55,491 Block: embedded_integer_one_one_d_array 2023-01-25T15:57:55,491 Block: embedded_one_one_two_d_array 2023-01-25T15:57:55,491 Block: deallocate_variables 2023-01-25T15:57:55,492 Building modules... 2023-01-25T15:57:55,492 Building module "fmodules"... 2023-01-25T15:57:55,492 Generating possibly empty wrappers" 2023-01-25T15:57:55,492 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,492 Constructing wrapper function "calculate_g2"... 2023-01-25T15:57:55,492 ridge = calculate_g2(neighbornumbers,neighborpositions,g_number,g_eta,rc,offset,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:57:55,492 Generating possibly empty wrappers" 2023-01-25T15:57:55,492 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,492 Constructing wrapper function "calculate_g4"... 2023-01-25T15:57:55,493 ridge = calculate_g4(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:57:55,493 Generating possibly empty wrappers" 2023-01-25T15:57:55,493 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,493 Constructing wrapper function "calculate_g5"... 2023-01-25T15:57:55,493 ridge = calculate_g5(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,ri,[p_gamma]) 2023-01-25T15:57:55,493 Generating possibly empty wrappers" 2023-01-25T15:57:55,493 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,493 Constructing wrapper function "calculate_g2_prime"... 2023-01-25T15:57:55,493 ridge = calculate_g2_prime(neighborindices,neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn_code,i,ri,m,l,offset,[p_gamma]) 2023-01-25T15:57:55,494 Generating possibly empty wrappers" 2023-01-25T15:57:55,494 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,494 Constructing wrapper function "calculate_g4_prime"... 2023-01-25T15:57:55,494 ridge = calculate_g4_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,i,ri,m,l,[p_gamma]) 2023-01-25T15:57:55,494 Generating possibly empty wrappers" 2023-01-25T15:57:55,494 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,494 Constructing wrapper function "calculate_g5_prime"... 2023-01-25T15:57:55,494 ridge = calculate_g5_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn_code,i,ri,m,l,[p_gamma]) 2023-01-25T15:57:55,494 Generating possibly empty wrappers" 2023-01-25T15:57:55,495 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,495 Constructing wrapper function "calculate_zernike_prime"... 2023-01-25T15:57:55,495 norm_prime = calculate_zernike_prime(n,l,n_indices,numbers,rs,g_numbers,cutoff,indexx,home,p,q,factorial,cutofffn_code,[n_length,fac_length,p_gamma]) 2023-01-25T15:57:55,495 Generating possibly empty wrappers" 2023-01-25T15:57:55,495 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,495 Constructing wrapper function "calculate_z"... 2023-01-25T15:57:55,495 output = calculate_z(n,l,m,x,y,z,factorial,[length]) 2023-01-25T15:57:55,495 Generating possibly empty wrappers" 2023-01-25T15:57:55,495 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,496 Constructing wrapper function "calculate_z_prime"... 2023-01-25T15:57:55,496 output = calculate_z_prime(n,l,m,x,y,z,p,factorial,[length]) 2023-01-25T15:57:55,496 Generating possibly empty wrappers" 2023-01-25T15:57:55,496 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,496 Constructing wrapper function "calculate_q"... 2023-01-25T15:57:55,496 output = calculate_q(nu,k,l,factorial,[length]) 2023-01-25T15:57:55,496 Generating possibly empty wrappers" 2023-01-25T15:57:55,496 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,496 Constructing wrapper function "binomial"... 2023-01-25T15:57:55,497 output = binomial(n,k,factorial,[length]) 2023-01-25T15:57:55,497 Generating possibly empty wrappers" 2023-01-25T15:57:55,497 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,497 Constructing wrapper function "check_version"... 2023-01-25T15:57:55,497 warning = check_version(version) 2023-01-25T15:57:55,497 Generating possibly empty wrappers" 2023-01-25T15:57:55,497 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,497 Constructing wrapper function "calculate_loss"... 2023-01-25T15:57:55,498 loss,dloss_dparameters,energyloss,forceloss,energy_maxresid,force_maxresid = calculate_loss(parameters,overfit_mask,lossprime,[num_parameters]) 2023-01-25T15:57:55,901 Generating possibly empty wrappers" 2023-01-25T15:57:55,902 Maybe empty "fmodules-f2pywrappers.f" 2023-01-25T15:57:55,902 Constructing wrapper function "deallocate_variables"... 2023-01-25T15:57:55,902 deallocate_variables() 2023-01-25T15:57:55,902 Constructing F90 module support for "neuralnetwork"... 2023-01-25T15:57:55,902 Variables: min_fingerprints max_fingerprints no_layers_of_elements no_nodes_of_elements activation_signal 2023-01-25T15:57:55,902 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,903 f90mod_rules.buildhooks: skipping type real_two_d_array 2023-01-25T15:57:55,903 f90mod_rules.buildhooks: skipping type element_parameters 2023-01-25T15:57:55,904 f90mod_rules.buildhooks: skipping type real_one_d_array 2023-01-25T15:57:55,904 Creating wrapper for Fortran function "calculate_image_energy"("calculate_image_energy")... 2023-01-25T15:57:55,904 Constructing wrapper function "neuralnetwork.calculate_image_energy"... 2023-01-25T15:57:55,904 calculate_image_energy = calculate_image_energy(inputs,parameters,[num_inputs,num_parameters]) 2023-01-25T15:57:55,904 Creating wrapper for Fortran function "calculate_atomic_energy"("calculate_atomic_energy")... 2023-01-25T15:57:55,904 Constructing wrapper function "neuralnetwork.calculate_atomic_energy"... 2023-01-25T15:57:55,905 calculate_atomic_energy = calculate_atomic_energy(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:57:55,905 Creating wrapper for Fortran function "calculate_force_"("calculate_force_")... 2023-01-25T15:57:55,905 Constructing wrapper function "neuralnetwork.calculate_force_"... 2023-01-25T15:57:55,905 calculate_force_ = calculate_force_(inputs,inputs_,parameters,[num_inputs,num_parameters]) 2023-01-25T15:57:55,905 Creating wrapper for Fortran function "calculate_force"("calculate_force")... 2023-01-25T15:57:55,905 Constructing wrapper function "neuralnetwork.calculate_force"... 2023-01-25T15:57:55,906 calculate_force = calculate_force(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:57:55,906 Creating wrapper for Fortran function "calculate_denergy_dparameters_"("calculate_denergy_dparameters_")... 2023-01-25T15:57:55,906 Constructing wrapper function "neuralnetwork.calculate_denergy_dparameters_"... 2023-01-25T15:57:55,906 calculate_denergy_dparameters_ = calculate_denergy_dparameters_(inputs,parameters,[num_inputs,num_parameters]) 2023-01-25T15:57:55,906 Creating wrapper for Fortran function "calculate_datomicenergy_dparameters"("calculate_datomicenergy_dparameters")... 2023-01-25T15:57:55,907 Constructing wrapper function "neuralnetwork.calculate_datomicenergy_dparameters"... 2023-01-25T15:57:55,907 calculate_datomicenergy_dparameters = calculate_datomicenergy_dparameters(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:57:55,907 Creating wrapper for Fortran function "calculate_dforce_dparameters_"("calculate_dforce_dparameters_")... 2023-01-25T15:57:55,908 Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters_"... 2023-01-25T15:57:55,908 calculate_dforce_dparameters_ = calculate_dforce_dparameters_(inputs,inputs_,parameters,[num_inputs,num_parameters]) 2023-01-25T15:57:55,908 Creating wrapper for Fortran function "calculate_dforce_dparameters"("calculate_dforce_dparameters")... 2023-01-25T15:57:55,908 Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters"... 2023-01-25T15:57:55,908 calculate_dforce_dparameters = calculate_dforce_dparameters(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) 2023-01-25T15:57:55,908 Constructing F90 module support for "cutoffs"... 2023-01-25T15:57:55,909 Creating wrapper for Fortran function "cutoff_fxn"("cutoff_fxn")... 2023-01-25T15:57:55,909 Constructing wrapper function "cutoffs.cutoff_fxn"... 2023-01-25T15:57:55,909 cutoff_fxn = cutoff_fxn(r,rc,cutofffn_code,[p_gamma]) 2023-01-25T15:57:55,909 Creating wrapper for Fortran function "cutoff_fxn_prime"("cutoff_fxn_prime")... 2023-01-25T15:57:55,909 Constructing wrapper function "cutoffs.cutoff_fxn_prime"... 2023-01-25T15:57:55,909 cutoff_fxn_prime = cutoff_fxn_prime(r,rc,cutofffn_code,[p_gamma]) 2023-01-25T15:57:55,910 Constructing F90 module support for "fingerprint_props"... 2023-01-25T15:57:55,910 Variables: num_fingerprints_of_elements raveled_fingerprints raveled_fingerprintprimes 2023-01-25T15:57:55,910 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,910 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,910 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,910 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,911 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,911 Constructing F90 module support for "model_props"... 2023-01-25T15:57:55,911 Variables: mode_signal train_forces energy_coefficient force_coefficient overfit numericprime d 2023-01-25T15:57:55,911 Constructing F90 module support for "images_props"... 2023-01-25T15:57:55,911 Variables: num_images num_elements elements_numbers num_images_atoms atomic_numbers num_neighbors raveled_neighborlists is_nft nft_indices actual_energies image_weights actual_forces num_atoms atomic_positions 2023-01-25T15:57:55,911 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,911 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,912 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,913 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,913 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,913 getarrdims:warning: assumed shape array, using 0 instead of ':' 2023-01-25T15:57:55,913 Wrote C/API module "fmodules" to file "build/src.linux-armv7l-3.9/amp/fmodulesmodule.c" 2023-01-25T15:57:55,913 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90" 2023-01-25T15:57:55,913 INFO: adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.c' to sources. 2023-01-25T15:57:55,913 INFO: adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp' to include_dirs. 2023-01-25T15:57:55,913 creating build/src.linux-armv7l-3.9/build 2023-01-25T15:57:55,913 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2023-01-25T15:57:55,914 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:55,914 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:55,914 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:55,914 INFO: adding 'build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers.f' to sources. 2023-01-25T15:57:55,914 INFO: adding 'build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90' to sources. 2023-01-25T15:57:55,914 INFO: build_src: building npy-pkg config files 2023-01-25T15:57:55,914 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-25T15:57:55,914 warnings.warn( 2023-01-25T15:57:55,934 creating /tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info 2023-01-25T15:57:55,958 writing /tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/PKG-INFO 2023-01-25T15:57:55,960 writing dependency_links to /tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/dependency_links.txt 2023-01-25T15:57:55,962 writing requirements to /tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/requires.txt 2023-01-25T15:57:55,963 writing top-level names to /tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/top_level.txt 2023-01-25T15:57:55,965 writing manifest file '/tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:57:55,976 /usr/local/lib/python3.9/dist-packages/setuptools/command/egg_info.py:643: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2023-01-25T15:57:55,977 Please extend command classes from setuptools instead of distutils. 2023-01-25T15:57:55,977 warnings.warn( 2023-01-25T15:57:55,980 INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2023-01-25T15:57:55,981 INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2023-01-25T15:57:56,003 reading manifest file '/tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:57:56,007 writing manifest file '/tmp/pip-pip-egg-info-0so1kf4t/amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:57:56,202 Preparing metadata (setup.py): finished with status 'done' 2023-01-25T15:57:56,208 Source in /tmp/pip-wheel-lw5gjgbj/amp-atomistics_ac7aeeaf74b84b13bec9bd6489d3026b has version 1.0.1, which satisfies requirement amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz 2023-01-25T15:57:56,209 Removed amp-atomistics==1.0.1 from https://files.pythonhosted.org/packages/b7/17/7c028f52c8a69f4bac3fb81004a141d0f93d0365b1e1b2ce95c0180abd7b/amp-atomistics-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-2jk7c391' 2023-01-25T15:57:56,214 Created temporary directory: /tmp/pip-unpack-m2oo2dvo 2023-01-25T15:57:56,215 Building wheels for collected packages: amp-atomistics 2023-01-25T15:57:56,219 Created temporary directory: /tmp/pip-wheel-_s2z997s 2023-01-25T15:57:56,219 Building wheel for amp-atomistics (setup.py): started 2023-01-25T15:57:56,220 Destination directory: /tmp/pip-wheel-_s2z997s 2023-01-25T15:57:56,220 Running command python setup.py bdist_wheel 2023-01-25T15:57:57,305 /tmp/pip-wheel-lw5gjgbj/amp-atomistics_ac7aeeaf74b84b13bec9bd6489d3026b/setup.py:7: DeprecationWarning: 2023-01-25T15:57:57,306 `numpy.distutils` is deprecated since NumPy 1.23.0, as a result 2023-01-25T15:57:57,306 of the deprecation of `distutils` itself. It will be removed for 2023-01-25T15:57:57,306 Python >= 3.12. For older Python versions it will remain present. 2023-01-25T15:57:57,306 It is recommended to use `setuptools < 60.0` for those Python versions. 2023-01-25T15:57:57,306 For more details, see: 2023-01-25T15:57:57,306 https://numpy.org/devdocs/reference/distutils_status_migration.html 2023-01-25T15:57:57,307 from numpy.distutils.core import Extension, setup 2023-01-25T15:57:57,689 running bdist_wheel 2023-01-25T15:57:57,713 running build 2023-01-25T15:57:57,713 running config_cc 2023-01-25T15:57:57,713 INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2023-01-25T15:57:57,713 running config_fc 2023-01-25T15:57:57,713 INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2023-01-25T15:57:57,714 running build_src 2023-01-25T15:57:57,714 INFO: build_src 2023-01-25T15:57:57,714 INFO: building extension "amp.fmodules" sources 2023-01-25T15:57:57,714 INFO: f2py options: [] 2023-01-25T15:57:57,714 INFO: adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.c' to sources. 2023-01-25T15:57:57,714 INFO: adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp' to include_dirs. 2023-01-25T15:57:57,814 INFO: adding 'build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers.f' to sources. 2023-01-25T15:57:57,815 INFO: adding 'build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90' to sources. 2023-01-25T15:57:57,815 INFO: build_src: building npy-pkg config files 2023-01-25T15:57:57,815 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-25T15:57:57,816 warnings.warn( 2023-01-25T15:57:57,838 running build_py 2023-01-25T15:57:57,840 creating build/lib.linux-armv7l-cpython-39 2023-01-25T15:57:57,840 creating build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,842 copying amp/analysis.py -> build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,845 copying amp/convert.py -> build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,848 copying amp/__init__.py -> build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,850 copying amp/utilities.py -> build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,854 creating build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,855 copying amp/descriptor/bispectrum.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,858 copying amp/descriptor/example.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,860 copying amp/descriptor/analysis.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,862 copying amp/descriptor/cutoffs.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,864 copying amp/descriptor/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,866 copying amp/descriptor/zernike.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,869 copying amp/descriptor/gaussian.py -> build/lib.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:57:57,874 creating build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,875 copying amp/model/kernelridge.py -> build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,881 copying amp/model/tflow.py -> build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,885 copying amp/model/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,890 copying amp/model/neuralnetwork.py -> build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,893 copying amp/model/__main__.py -> build/lib.linux-armv7l-cpython-39/amp/model 2023-01-25T15:57:57,896 creating build/lib.linux-armv7l-cpython-39/amp/nft 2023-01-25T15:57:57,897 copying amp/nft/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/nft 2023-01-25T15:57:57,898 copying amp/nft/dft_jobs.py -> build/lib.linux-armv7l-cpython-39/amp/nft 2023-01-25T15:57:57,901 copying amp/nft/initialization.py -> build/lib.linux-armv7l-cpython-39/amp/nft 2023-01-25T15:57:57,903 copying amp/nft/activelearner.py -> build/lib.linux-armv7l-cpython-39/amp/nft 2023-01-25T15:57:57,906 creating build/lib.linux-armv7l-cpython-39/amp/preprocess 2023-01-25T15:57:57,907 copying amp/preprocess/feature_selection.py -> build/lib.linux-armv7l-cpython-39/amp/preprocess 2023-01-25T15:57:57,910 copying amp/preprocess/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/preprocess 2023-01-25T15:57:57,911 copying amp/preprocess/image_selection.py -> build/lib.linux-armv7l-cpython-39/amp/preprocess 2023-01-25T15:57:57,914 creating build/lib.linux-armv7l-cpython-39/amp/regression 2023-01-25T15:57:57,915 copying amp/regression/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/regression 2023-01-25T15:57:57,918 creating build/lib.linux-armv7l-cpython-39/amp/stats 2023-01-25T15:57:57,919 copying amp/stats/bootstrap.py -> build/lib.linux-armv7l-cpython-39/amp/stats 2023-01-25T15:57:57,922 copying amp/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/amp/stats 2023-01-25T15:57:57,923 copying amp/VERSION -> build/lib.linux-armv7l-cpython-39/amp 2023-01-25T15:57:57,928 running build_ext 2023-01-25T15:57:57,967 INFO: customize UnixCCompiler 2023-01-25T15:57:57,968 INFO: customize UnixCCompiler using build_ext 2023-01-25T15:57:58,099 INFO: CCompilerOpt.cc_test_cexpr[1085] : testing compiler expression defined(__ARM_ARCH_7__) || defined(__ARM_ARCH_7A__) 2023-01-25T15:57:58,101 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-25T15:57:58,101 creating /tmp/tmpxuclj_si/tmp 2023-01-25T15:57:58,102 creating /tmp/tmpxuclj_si/tmp/tmpxuclj_si 2023-01-25T15:57:58,102 INFO: compile options: '-I/usr/include/python3.9 -c' 2023-01-25T15:57:58,216 WARN: CCompilerOpt.dist_test[630] : CCompilerOpt._dist_test_spawn[764] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpxuclj_si/npy_dist_test_cexpr.c -o /tmp/tmpxuclj_si/tmp/tmpxuclj_si/npy_dist_test_cexpr.o -MMD -MF /tmp/tmpxuclj_si/tmp/tmpxuclj_si/npy_dist_test_cexpr.o.d) failed with exit status 1 output -> 2023-01-25T15:57:58,217 /tmp/tmpxuclj_si/npy_dist_test_cexpr.c:2:6: error: #error "unsupported expression" 2023-01-25T15:57:58,217 2 | #error "unsupported expression" 2023-01-25T15:57:58,217 | ^~~~~ 2023-01-25T15:57:58,226 WARN: CCompilerOpt.cc_test_cexpr[1096] : testing failed 2023-01-25T15:57:58,239 WARN: CCompilerOpt.__init__[1012] : unable to detect CPU architecture which lead to disable the optimization. check dist_info:<< 2023-01-25T15:57:58,239 ('linux-armv7l', 'arm-linux-gnueabihf-gcc', '-pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2') 2023-01-25T15:57:58,239 >> 2023-01-25T15:57:58,249 INFO: CCompilerOpt.cc_test_flags[1073] : testing flags (-march=native) 2023-01-25T15:57:58,249 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-25T15:57:58,250 creating /tmp/tmpxuclj_si/usr 2023-01-25T15:57:58,251 creating /tmp/tmpxuclj_si/usr/local 2023-01-25T15:57:58,251 creating /tmp/tmpxuclj_si/usr/local/lib 2023-01-25T15:57:58,252 creating /tmp/tmpxuclj_si/usr/local/lib/python3.9 2023-01-25T15:57:58,253 creating /tmp/tmpxuclj_si/usr/local/lib/python3.9/dist-packages 2023-01-25T15:57:58,253 creating /tmp/tmpxuclj_si/usr/local/lib/python3.9/dist-packages/numpy 2023-01-25T15:57:58,254 creating /tmp/tmpxuclj_si/usr/local/lib/python3.9/dist-packages/numpy/distutils 2023-01-25T15:57:58,254 creating /tmp/tmpxuclj_si/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks 2023-01-25T15:57:58,255 INFO: compile options: '-I/usr/include/python3.9 -c' 2023-01-25T15:57:58,255 extra options: '-march=native' 2023-01-25T15:57:58,365 INFO: CCompilerOpt.cc_test_flags[1073] : testing flags (-O3) 2023-01-25T15:57:58,365 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-25T15:57:58,366 INFO: compile options: '-I/usr/include/python3.9 -c' 2023-01-25T15:57:58,366 extra options: '-O3' 2023-01-25T15:57:58,456 INFO: CCompilerOpt.cc_test_flags[1073] : testing flags (-Werror) 2023-01-25T15:57:58,456 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-25T15:57:58,457 INFO: compile options: '-I/usr/include/python3.9 -c' 2023-01-25T15:57:58,457 extra options: '-Werror' 2023-01-25T15:57:58,547 INFO: CCompilerOpt.__init__[1782] : check requested baseline 2023-01-25T15:57:58,558 INFO: CCompilerOpt.__init__[1791] : check requested dispatch-able features 2023-01-25T15:57:58,568 INFO: CCompilerOpt.__init__[1807] : initialize targets groups 2023-01-25T15:57:58,578 INFO: CCompilerOpt.__init__[1809] : parse target group simd_test 2023-01-25T15:57:58,588 INFO: CCompilerOpt._parse_target_tokens[2020] : skip targets (VSX (FMA3 AVX2) VSX4 NEON VXE VSX2 VSX3 SSE2 AVX512_SKX XOP ASIMD AVX512F VX VXE2 FMA4 SSE42) not part of baseline or dispatch-able features 2023-01-25T15:57:58,598 INFO: CCompilerOpt.generate_dispatch_header[2353] : generate CPU dispatch header: (build/src.linux-armv7l-3.9/numpy/distutils/include/npy_cpu_dispatch_config.h) 2023-01-25T15:57:58,608 WARN: CCompilerOpt.generate_dispatch_header[2362] : dispatch header dir build/src.linux-armv7l-3.9/numpy/distutils/include does not exist, creating it 2023-01-25T15:57:58,661 INFO: get_default_fcompiler: matching types: '['arm', 'gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2023-01-25T15:57:58,661 INFO: customize ArmFlangCompiler 2023-01-25T15:57:58,663 WARN: Could not locate executable armflang 2023-01-25T15:57:58,663 INFO: customize Gnu95FCompiler 2023-01-25T15:57:58,664 INFO: Found executable /usr/bin/gfortran 2023-01-25T15:57:58,722 INFO: customize Gnu95FCompiler 2023-01-25T15:57:58,778 INFO: customize Gnu95FCompiler using build_ext 2023-01-25T15:57:58,779 INFO: building 'amp.fmodules' extension 2023-01-25T15:57:58,790 INFO: compiling C sources 2023-01-25T15:57:58,791 INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-01-25T15:57:58,792 creating build/temp.linux-armv7l-cpython-39/build 2023-01-25T15:57:58,792 creating build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9 2023-01-25T15:57:58,793 creating build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:58,794 creating build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/build 2023-01-25T15:57:58,794 creating build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2023-01-25T15:57:58,795 creating build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp 2023-01-25T15:57:58,796 INFO: compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2023-01-25T15:57:58,804 INFO: arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/amp/fmodulesmodule.c 2023-01-25T15:57:58,805 INFO: arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.c 2023-01-25T15:57:59,318 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-01-25T15:57:59,318 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-25T15:57:59,318 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-01-25T15:57:59,318 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.h:13, 2023-01-25T15:57:59,318 from build/src.linux-armv7l-3.9/amp/fmodulesmodule.c:23: 2023-01-25T15:57:59,319 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-25T15:57:59,319 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-01-25T15:57:59,319 | ^~~~~~~ 2023-01-25T15:57:59,319 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-01-25T15:57:59,319 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-25T15:57:59,320 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-01-25T15:57:59,320 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.h:13, 2023-01-25T15:57:59,320 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.c:2: 2023-01-25T15:57:59,320 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-25T15:57:59,320 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-01-25T15:57:59,320 | ^~~~~~~ 2023-01-25T15:57:59,511 build/src.linux-armv7l-3.9/amp/fmodulesmodule.c:117:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2023-01-25T15:57:59,511 117 | static int f2py_size(PyArrayObject* var, ...) 2023-01-25T15:57:59,512 | ^~~~~~~~~ 2023-01-25T15:58:03,018 INFO: compiling Fortran 90 module sources 2023-01-25T15:58:03,019 creating build/temp.linux-armv7l-cpython-39/amp 2023-01-25T15:58:03,019 INFO: Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:03,020 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:03,020 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:03,020 creating build/temp.linux-armv7l-cpython-39/amp/model 2023-01-25T15:58:03,021 creating build/temp.linux-armv7l-cpython-39/amp/descriptor 2023-01-25T15:58:03,022 INFO: compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2023-01-25T15:58:03,022 extra options: '-Jbuild/temp.linux-armv7l-cpython-39/amp -Ibuild/temp.linux-armv7l-cpython-39/amp' 2023-01-25T15:58:03,023 INFO: gfortran:f90: amp/model/neuralnetwork.f90 2023-01-25T15:58:27,133 INFO: gfortran:f90: amp/descriptor/cutoffs.f90 2023-01-25T15:58:27,259 INFO: gfortran:f90: amp/model.f90 2023-01-25T15:58:37,611 INFO: compiling Fortran sources 2023-01-25T15:58:37,611 INFO: Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:37,612 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:37,612 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2023-01-25T15:58:37,613 INFO: compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2023-01-25T15:58:37,613 extra options: '-Jbuild/temp.linux-armv7l-cpython-39/amp -Ibuild/temp.linux-armv7l-cpython-39/amp' 2023-01-25T15:58:37,615 INFO: gfortran:f90: amp/descriptor/gaussian.f90 2023-01-25T15:58:38,936 INFO: gfortran:f90: amp/descriptor/zernike.f90 2023-01-25T15:58:39,779 INFO: gfortran:f90: build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90 2023-01-25T15:58:39,920 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:58:39,920 256 | use neuralnetwork, only : min_fingerprints 2023-01-25T15:58:39,920 | 1 2023-01-25T15:58:39,920 Warning: Unused module variable ‘max_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,921 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:58:39,921 256 | use neuralnetwork, only : min_fingerprints 2023-01-25T15:58:39,921 | 1 2023-01-25T15:58:39,921 Warning: Unused module variable ‘min_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,921 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:58:39,922 256 | use neuralnetwork, only : min_fingerprints 2023-01-25T15:58:39,922 | 1 2023-01-25T15:58:39,922 Warning: Unused module variable ‘no_layers_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,922 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 2023-01-25T15:58:39,922 256 | use neuralnetwork, only : min_fingerprints 2023-01-25T15:58:39,923 | 1 2023-01-25T15:58:39,923 Warning: Unused module variable ‘no_nodes_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,925 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:58:39,926 533 | use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:58:39,926 | 1 2023-01-25T15:58:39,926 Warning: Unused module variable ‘num_fingerprints_of_elements’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,926 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:58:39,926 533 | use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:58:39,927 | 1 2023-01-25T15:58:39,927 Warning: Unused module variable ‘raveled_fingerprintprimes’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,927 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 2023-01-25T15:58:39,927 533 | use fingerprint_props, only : num_fingerprints_of_elements 2023-01-25T15:58:39,927 | 1 2023-01-25T15:58:39,927 Warning: Unused module variable ‘raveled_fingerprints’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,935 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,935 902 | use images_props, only : num_images 2023-01-25T15:58:39,935 | 1 2023-01-25T15:58:39,935 Warning: Unused module variable ‘actual_energies’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,935 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,936 902 | use images_props, only : num_images 2023-01-25T15:58:39,936 | 1 2023-01-25T15:58:39,936 Warning: Unused module variable ‘actual_forces’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,936 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,936 902 | use images_props, only : num_images 2023-01-25T15:58:39,937 | 1 2023-01-25T15:58:39,937 Warning: Unused module variable ‘atomic_numbers’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,937 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,937 902 | use images_props, only : num_images 2023-01-25T15:58:39,937 | 1 2023-01-25T15:58:39,937 Warning: Unused module variable ‘atomic_positions’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,938 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,938 902 | use images_props, only : num_images 2023-01-25T15:58:39,938 | 1 2023-01-25T15:58:39,938 Warning: Unused module variable ‘elements_numbers’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,938 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,938 902 | use images_props, only : num_images 2023-01-25T15:58:39,939 | 1 2023-01-25T15:58:39,939 Warning: Unused module variable ‘image_weights’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,939 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,939 902 | use images_props, only : num_images 2023-01-25T15:58:39,939 | 1 2023-01-25T15:58:39,939 Warning: Unused module variable ‘is_nft’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,940 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,940 902 | use images_props, only : num_images 2023-01-25T15:58:39,940 | 1 2023-01-25T15:58:39,940 Warning: Unused module variable ‘nft_indices’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,940 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,941 902 | use images_props, only : num_images 2023-01-25T15:58:39,941 | 1 2023-01-25T15:58:39,941 Warning: Unused module variable ‘num_images_atoms’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,942 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,942 902 | use images_props, only : num_images 2023-01-25T15:58:39,942 | 1 2023-01-25T15:58:39,942 Warning: Unused module variable ‘num_neighbors’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:39,942 build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.f90:902:10: 2023-01-25T15:58:39,942 902 | use images_props, only : num_images 2023-01-25T15:58:39,943 | 1 2023-01-25T15:58:39,943 Warning: Unused module variable ‘raveled_neighborlists’ which has been explicitly imported at (1) [-Wunused-variable] 2023-01-25T15:58:41,119 INFO: gfortran:f77: build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers.f 2023-01-25T15:58:41,194 INFO: /usr/bin/gfortran -Wall -g -Wall -g -shared build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/amp/fmodulesmodule.o build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amp/fortranobject.o build/temp.linux-armv7l-cpython-39/amp/model/neuralnetwork.o build/temp.linux-armv7l-cpython-39/amp/descriptor/cutoffs.o build/temp.linux-armv7l-cpython-39/amp/model.o build/temp.linux-armv7l-cpython-39/amp/descriptor/gaussian.o build/temp.linux-armv7l-cpython-39/amp/descriptor/zernike.o build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers.o build/temp.linux-armv7l-cpython-39/build/src.linux-armv7l-3.9/amp/fmodules-f2pywrappers2.o -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib -lgfortran -o build/lib.linux-armv7l-cpython-39/amp/fmodules.cpython-39-arm-linux-gnueabihf.so 2023-01-25T15:58:41,408 running build_scripts 2023-01-25T15:58:41,409 creating build/scripts.linux-armv7l-3.9 2023-01-25T15:58:41,410 copying and adjusting tools/amp-compress -> build/scripts.linux-armv7l-3.9 2023-01-25T15:58:41,412 copying and adjusting tools/amp-plotconvergence -> build/scripts.linux-armv7l-3.9 2023-01-25T15:58:41,414 changing mode of build/scripts.linux-armv7l-3.9/amp-compress from 644 to 755 2023-01-25T15:58:41,414 changing mode of build/scripts.linux-armv7l-3.9/amp-plotconvergence from 644 to 755 2023-01-25T15:58:41,440 installing to build/bdist.linux-armv7l/wheel 2023-01-25T15:58:41,440 running install 2023-01-25T15:58:41,465 running install_lib 2023-01-25T15:58:41,492 creating build/bdist.linux-armv7l 2023-01-25T15:58:41,492 creating build/bdist.linux-armv7l/wheel 2023-01-25T15:58:41,494 creating build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,495 copying build/lib.linux-armv7l-cpython-39/amp/analysis.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,499 creating build/bdist.linux-armv7l/wheel/amp/regression 2023-01-25T15:58:41,500 copying build/lib.linux-armv7l-cpython-39/amp/regression/__init__.py -> build/bdist.linux-armv7l/wheel/amp/regression 2023-01-25T15:58:41,503 copying build/lib.linux-armv7l-cpython-39/amp/convert.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,506 creating build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,507 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/bispectrum.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,510 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/example.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,513 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/analysis.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,515 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/cutoffs.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,517 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/__init__.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,519 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/zernike.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,522 copying build/lib.linux-armv7l-cpython-39/amp/descriptor/gaussian.py -> build/bdist.linux-armv7l/wheel/amp/descriptor 2023-01-25T15:58:41,526 copying build/lib.linux-armv7l-cpython-39/amp/VERSION -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,528 creating build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:58:41,529 copying build/lib.linux-armv7l-cpython-39/amp/nft/__init__.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:58:41,531 copying build/lib.linux-armv7l-cpython-39/amp/nft/dft_jobs.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:58:41,533 copying build/lib.linux-armv7l-cpython-39/amp/nft/initialization.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:58:41,536 copying build/lib.linux-armv7l-cpython-39/amp/nft/activelearner.py -> build/bdist.linux-armv7l/wheel/amp/nft 2023-01-25T15:58:41,539 copying build/lib.linux-armv7l-cpython-39/amp/fmodules.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,559 copying build/lib.linux-armv7l-cpython-39/amp/__init__.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,562 creating build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:58:41,563 copying build/lib.linux-armv7l-cpython-39/amp/preprocess/feature_selection.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:58:41,565 copying build/lib.linux-armv7l-cpython-39/amp/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:58:41,567 copying build/lib.linux-armv7l-cpython-39/amp/preprocess/image_selection.py -> build/bdist.linux-armv7l/wheel/amp/preprocess 2023-01-25T15:58:41,569 copying build/lib.linux-armv7l-cpython-39/amp/utilities.py -> build/bdist.linux-armv7l/wheel/amp 2023-01-25T15:58:41,573 creating build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:58:41,574 copying build/lib.linux-armv7l-cpython-39/amp/stats/bootstrap.py -> build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:58:41,577 copying build/lib.linux-armv7l-cpython-39/amp/stats/__init__.py -> build/bdist.linux-armv7l/wheel/amp/stats 2023-01-25T15:58:41,579 creating build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,580 copying build/lib.linux-armv7l-cpython-39/amp/model/kernelridge.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,585 copying build/lib.linux-armv7l-cpython-39/amp/model/tflow.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,590 copying build/lib.linux-armv7l-cpython-39/amp/model/__init__.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,593 copying build/lib.linux-armv7l-cpython-39/amp/model/neuralnetwork.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,596 copying build/lib.linux-armv7l-cpython-39/amp/model/__main__.py -> build/bdist.linux-armv7l/wheel/amp/model 2023-01-25T15:58:41,599 running install_egg_info 2023-01-25T15:58:41,626 running egg_info 2023-01-25T15:58:41,627 creating amp_atomistics.egg-info 2023-01-25T15:58:41,656 writing amp_atomistics.egg-info/PKG-INFO 2023-01-25T15:58:41,658 writing dependency_links to amp_atomistics.egg-info/dependency_links.txt 2023-01-25T15:58:41,660 writing requirements to amp_atomistics.egg-info/requires.txt 2023-01-25T15:58:41,662 writing top-level names to amp_atomistics.egg-info/top_level.txt 2023-01-25T15:58:41,663 writing manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:58:41,676 /usr/local/lib/python3.9/dist-packages/setuptools/command/egg_info.py:643: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2023-01-25T15:58:41,676 Please extend command classes from setuptools instead of distutils. 2023-01-25T15:58:41,676 warnings.warn( 2023-01-25T15:58:41,703 reading manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:58:41,708 writing manifest file 'amp_atomistics.egg-info/SOURCES.txt' 2023-01-25T15:58:41,709 Copying amp_atomistics.egg-info to build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1-py3.9.egg-info 2023-01-25T15:58:41,721 running install_scripts 2023-01-25T15:58:41,723 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data 2023-01-25T15:58:41,723 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:58:41,724 copying build/scripts.linux-armv7l-3.9/amp-compress -> build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:58:41,726 copying build/scripts.linux-armv7l-3.9/amp-plotconvergence -> build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts 2023-01-25T15:58:41,728 changing mode of build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts/amp-compress to 755 2023-01-25T15:58:41,728 changing mode of build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.data/scripts/amp-plotconvergence to 755 2023-01-25T15:58:41,728 running install_clib 2023-01-25T15:58:41,728 INFO: customize UnixCCompiler 2023-01-25T15:58:41,753 creating build/bdist.linux-armv7l/wheel/amp_atomistics-1.0.1.dist-info/WHEEL 2023-01-25T15:58:41,756 creating '/tmp/pip-wheel-_s2z997s/amp_atomistics-1.0.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-25T15:58:41,760 adding 'amp/VERSION' 2023-01-25T15:58:41,763 adding 'amp/__init__.py' 2023-01-25T15:58:41,767 adding 'amp/analysis.py' 2023-01-25T15:58:41,771 adding 'amp/convert.py' 2023-01-25T15:58:41,941 adding 'amp/fmodules.cpython-39-arm-linux-gnueabihf.so' 2023-01-25T15:58:41,954 adding 'amp/utilities.py' 2023-01-25T15:58:41,956 adding 'amp/descriptor/__init__.py' 2023-01-25T15:58:41,958 adding 'amp/descriptor/analysis.py' 2023-01-25T15:58:41,961 adding 'amp/descriptor/bispectrum.py' 2023-01-25T15:58:41,963 adding 'amp/descriptor/cutoffs.py' 2023-01-25T15:58:41,965 adding 'amp/descriptor/example.py' 2023-01-25T15:58:41,970 adding 'amp/descriptor/gaussian.py' 2023-01-25T15:58:41,975 adding 'amp/descriptor/zernike.py' 2023-01-25T15:58:41,982 adding 'amp/model/__init__.py' 2023-01-25T15:58:41,984 adding 'amp/model/__main__.py' 2023-01-25T15:58:41,997 adding 'amp/model/kernelridge.py' 2023-01-25T15:58:42,004 adding 'amp/model/neuralnetwork.py' 2023-01-25T15:58:42,012 adding 'amp/model/tflow.py' 2023-01-25T15:58:42,014 adding 'amp/nft/__init__.py' 2023-01-25T15:58:42,018 adding 'amp/nft/activelearner.py' 2023-01-25T15:58:42,020 adding 'amp/nft/dft_jobs.py' 2023-01-25T15:58:42,022 adding 'amp/nft/initialization.py' 2023-01-25T15:58:42,024 adding 'amp/preprocess/__init__.py' 2023-01-25T15:58:42,026 adding 'amp/preprocess/feature_selection.py' 2023-01-25T15:58:42,040 adding 'amp/preprocess/image_selection.py' 2023-01-25T15:58:42,042 adding 'amp/regression/__init__.py' 2023-01-25T15:58:42,044 adding 'amp/stats/__init__.py' 2023-01-25T15:58:42,047 adding 'amp/stats/bootstrap.py' 2023-01-25T15:58:42,050 adding 'amp_atomistics-1.0.1.data/scripts/amp-compress' 2023-01-25T15:58:42,051 adding 'amp_atomistics-1.0.1.data/scripts/amp-plotconvergence' 2023-01-25T15:58:42,053 adding 'amp_atomistics-1.0.1.dist-info/METADATA' 2023-01-25T15:58:42,054 adding 'amp_atomistics-1.0.1.dist-info/WHEEL' 2023-01-25T15:58:42,055 adding 'amp_atomistics-1.0.1.dist-info/top_level.txt' 2023-01-25T15:58:42,056 adding 'amp_atomistics-1.0.1.dist-info/RECORD' 2023-01-25T15:58:42,068 removing build/bdist.linux-armv7l/wheel 2023-01-25T15:58:42,083 INFO: 2023-01-25T15:58:42,084 ########### EXT COMPILER OPTIMIZATION ########### 2023-01-25T15:58:42,084 INFO: Platform : 2023-01-25T15:58:42,084 Architecture: unsupported 2023-01-25T15:58:42,084 Compiler : gcc 2023-01-25T15:58:42,084 CPU baseline : 2023-01-25T15:58:42,084 Requested : optimization disabled 2023-01-25T15:58:42,085 Enabled : none 2023-01-25T15:58:42,085 Flags : none 2023-01-25T15:58:42,085 Extra checks: none 2023-01-25T15:58:42,085 Requested : optimization disabled 2023-01-25T15:58:42,085 CPU dispatch : 2023-01-25T15:58:42,085 Enabled : none 2023-01-25T15:58:42,085 Generated : none 2023-01-25T15:58:42,086 INFO: CCompilerOpt.cache_flush[857] : write cache to path -> /tmp/pip-wheel-lw5gjgbj/amp-atomistics_ac7aeeaf74b84b13bec9bd6489d3026b/build/temp.linux-armv7l-cpython-39/ccompiler_opt_cache_ext.py 2023-01-25T15:58:42,294 Building wheel for amp-atomistics (setup.py): finished with status 'done' 2023-01-25T15:58:42,303 Created wheel for amp-atomistics: filename=amp_atomistics-1.0.1-cp39-cp39-linux_armv7l.whl size=491852 sha256=2e07675afcfbec1c305eaf1c889ef2618b6504dae6afcdeb8c15b17b3909659e 2023-01-25T15:58:42,304 Stored in directory: /tmp/pip-ephem-wheel-cache-2xesio61/wheels/03/ea/24/34e5d481ad4f5c3978819628a3a598b7930dde574498d68369 2023-01-25T15:58:42,317 Successfully built amp-atomistics 2023-01-25T15:58:42,339 Removed build tracker: '/tmp/pip-build-tracker-2jk7c391'