2023-01-25T21:06:28,645 Created temporary directory: /tmp/pip-ephem-wheel-cache-1vmxmkai 2023-01-25T21:06:28,650 Created temporary directory: /tmp/pip-build-tracker-h9een_qm 2023-01-25T21:06:28,650 Initialized build tracking at /tmp/pip-build-tracker-h9een_qm 2023-01-25T21:06:28,651 Created build tracker: /tmp/pip-build-tracker-h9een_qm 2023-01-25T21:06:28,651 Entered build tracker: /tmp/pip-build-tracker-h9een_qm 2023-01-25T21:06:28,652 Created temporary directory: /tmp/pip-wheel-2vq4sdqz 2023-01-25T21:06:28,660 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-25T21:06:28,666 Created temporary directory: /tmp/pip-ephem-wheel-cache-ksg2aubu 2023-01-25T21:06:28,717 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-25T21:06:28,724 2 location(s) to search for versions of modelcif: 2023-01-25T21:06:28,724 * https://pypi.org/simple/modelcif/ 2023-01-25T21:06:28,724 * https://www.piwheels.org/simple/modelcif/ 2023-01-25T21:06:28,725 Fetching project page and analyzing links: https://pypi.org/simple/modelcif/ 2023-01-25T21:06:28,726 Getting page https://pypi.org/simple/modelcif/ 2023-01-25T21:06:28,729 Found index url https://pypi.org/simple 2023-01-25T21:06:28,952 Fetched page https://pypi.org/simple/modelcif/ as application/vnd.pypi.simple.v1+json 2023-01-25T21:06:28,957 Found link https://files.pythonhosted.org/packages/86/a5/ca2f0f3d28f3b45e87d8e9865ebd9a049c51cff212f51b2dcd6909d35738/modelcif-0.1.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.1 2023-01-25T21:06:28,957 Found link https://files.pythonhosted.org/packages/c0/e4/41bb0130b42352675ae2190c3ac4ab34908e9e3f92b14c4551bcafc93564/modelcif-0.2.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.2 2023-01-25T21:06:28,958 Found link https://files.pythonhosted.org/packages/f4/05/3d5e25e1a99cc28e4460a895bbb57831c7107f5365a610d135fb581017ac/modelcif-0.3.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.3 2023-01-25T21:06:28,959 Found link https://files.pythonhosted.org/packages/d2/6f/c57d3c78010b217522695647886585df97053f625a4731221e60da5ca8ee/modelcif-0.4.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.4 2023-01-25T21:06:28,960 Found link https://files.pythonhosted.org/packages/b0/a6/6306671254961b83234c7796b5cb65e6fa1a60dda379e48d474984464842/modelcif-0.5.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.5 2023-01-25T21:06:28,960 Found link https://files.pythonhosted.org/packages/54/32/41d965a0d9eff134c58830ec90682fdb3b30ff59fcdf62a1ce5c51239a6e/modelcif-0.6.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.6 2023-01-25T21:06:28,961 Found link https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.7 2023-01-25T21:06:28,962 Fetching project page and analyzing links: https://www.piwheels.org/simple/modelcif/ 2023-01-25T21:06:28,962 Getting page https://www.piwheels.org/simple/modelcif/ 2023-01-25T21:06:28,965 Found index url https://www.piwheels.org/simple 2023-01-25T21:06:29,205 Fetched page https://www.piwheels.org/simple/modelcif/ as text/html 2023-01-25T21:06:29,212 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.6-py3-none-any.whl#sha256=801425688ac82395addadb3b309f8997c14e82f54a1d1f496709629a7cf0120f (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,212 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.5-py3-none-any.whl#sha256=8147a5f6f13bbbc25f264598c5b811918c46052a31cd8dc0f96d61a5c1a1f10e (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,213 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.4-py3-none-any.whl#sha256=6f0b768aea5f824a71925aafb9a24ada80a01e46d092fa10d716fc618d17f306 (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,213 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.3-py3-none-any.whl#sha256=29e9f2d6e46ceb2eb0db7184254c7f08855642868169dc34c42598c1854fe1f0 (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,214 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.2-py3-none-any.whl#sha256=e33a96339a2aac8c856cb699699a0b0085e5a55589fb463f0c369d974a8314ac (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,214 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.1-py3-none-any.whl#sha256=196dd0a0a4f66f3a926afb5bd2fee81d8e68eeb69a9e3c3daaeb388fad7d9467 (from https://www.piwheels.org/simple/modelcif/) 2023-01-25T21:06:29,215 Skipping link: not a file: https://www.piwheels.org/simple/modelcif/ 2023-01-25T21:06:29,215 Skipping link: not a file: https://pypi.org/simple/modelcif/ 2023-01-25T21:06:29,254 Given no hashes to check 1 links for project 'modelcif': discarding no candidates 2023-01-25T21:06:29,284 Collecting modelcif==0.7 2023-01-25T21:06:29,288 Created temporary directory: /tmp/pip-unpack-yw3y4h6v 2023-01-25T21:06:29,563 Downloading modelcif-0.7.tar.gz (59 kB) 2023-01-25T21:06:29,805 Added modelcif==0.7 from https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz to build tracker '/tmp/pip-build-tracker-h9een_qm' 2023-01-25T21:06:29,807 Running setup.py (path:/tmp/pip-wheel-2vq4sdqz/modelcif_a3ac922bd95941ed95b0f3891d4e22d8/setup.py) egg_info for package modelcif 2023-01-25T21:06:29,809 Created temporary directory: /tmp/pip-pip-egg-info-lzrkrdgd 2023-01-25T21:06:29,809 Preparing metadata (setup.py): started 2023-01-25T21:06:29,811 Running command python setup.py egg_info 2023-01-25T21:06:32,252 running egg_info 2023-01-25T21:06:32,256 creating /tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info 2023-01-25T21:06:32,318 writing /tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/PKG-INFO 2023-01-25T21:06:32,322 writing dependency_links to /tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/dependency_links.txt 2023-01-25T21:06:32,326 writing requirements to /tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/requires.txt 2023-01-25T21:06:32,328 writing top-level names to /tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/top_level.txt 2023-01-25T21:06:32,330 writing manifest file '/tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/SOURCES.txt' 2023-01-25T21:06:32,527 reading manifest file '/tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/SOURCES.txt' 2023-01-25T21:06:32,530 reading manifest template 'MANIFEST.in' 2023-01-25T21:06:32,533 adding license file 'LICENSE' 2023-01-25T21:06:32,540 writing manifest file '/tmp/pip-pip-egg-info-lzrkrdgd/modelcif.egg-info/SOURCES.txt' 2023-01-25T21:06:32,743 Preparing metadata (setup.py): finished with status 'done' 2023-01-25T21:06:32,756 Source in /tmp/pip-wheel-2vq4sdqz/modelcif_a3ac922bd95941ed95b0f3891d4e22d8 has version 0.7, which satisfies requirement modelcif==0.7 from https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz 2023-01-25T21:06:32,758 Removed modelcif==0.7 from https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz from build tracker '/tmp/pip-build-tracker-h9een_qm' 2023-01-25T21:06:32,769 Created temporary directory: /tmp/pip-unpack-4fbz9nxg 2023-01-25T21:06:32,770 Building wheels for collected packages: modelcif 2023-01-25T21:06:32,780 Created temporary directory: /tmp/pip-wheel-j3q5r444 2023-01-25T21:06:32,781 Building wheel for modelcif (setup.py): started 2023-01-25T21:06:32,783 Destination directory: /tmp/pip-wheel-j3q5r444 2023-01-25T21:06:32,783 Running command python setup.py bdist_wheel 2023-01-25T21:06:35,272 running bdist_wheel 2023-01-25T21:06:36,010 running build 2023-01-25T21:06:36,010 running build_py 2023-01-25T21:06:36,083 creating build 2023-01-25T21:06:36,084 creating build/lib 2023-01-25T21:06:36,085 creating build/lib/modelcif 2023-01-25T21:06:36,088 copying modelcif/reader.py -> build/lib/modelcif 2023-01-25T21:06:36,094 copying modelcif/reference.py -> build/lib/modelcif 2023-01-25T21:06:36,099 copying modelcif/__init__.py -> build/lib/modelcif 2023-01-25T21:06:36,104 copying modelcif/qa_metric.py -> build/lib/modelcif 2023-01-25T21:06:36,108 copying modelcif/alignment.py -> build/lib/modelcif 2023-01-25T21:06:36,113 copying modelcif/model.py -> build/lib/modelcif 2023-01-25T21:06:36,117 copying modelcif/associated.py -> build/lib/modelcif 2023-01-25T21:06:36,121 copying modelcif/data.py -> build/lib/modelcif 2023-01-25T21:06:36,125 copying modelcif/protocol.py -> build/lib/modelcif 2023-01-25T21:06:36,129 copying modelcif/descriptor.py -> build/lib/modelcif 2023-01-25T21:06:36,132 copying modelcif/dumper.py -> build/lib/modelcif 2023-01-25T21:06:36,215 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-25T21:06:36,215 setuptools.SetuptoolsDeprecationWarning, 2023-01-25T21:06:36,282 installing to build/bdist.linux-armv7l/wheel 2023-01-25T21:06:36,283 running install 2023-01-25T21:06:36,344 running install_lib 2023-01-25T21:06:36,413 creating build/bdist.linux-armv7l 2023-01-25T21:06:36,415 creating build/bdist.linux-armv7l/wheel 2023-01-25T21:06:36,419 creating build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,421 copying build/lib/modelcif/reader.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,428 copying build/lib/modelcif/reference.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,433 copying build/lib/modelcif/__init__.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,438 copying build/lib/modelcif/qa_metric.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,442 copying build/lib/modelcif/alignment.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,446 copying build/lib/modelcif/model.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,450 copying build/lib/modelcif/associated.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,454 copying build/lib/modelcif/data.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,457 copying build/lib/modelcif/protocol.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,461 copying build/lib/modelcif/descriptor.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,464 copying build/lib/modelcif/dumper.py -> build/bdist.linux-armv7l/wheel/modelcif 2023-01-25T21:06:36,470 running install_egg_info 2023-01-25T21:06:36,629 running egg_info 2023-01-25T21:06:36,693 writing modelcif.egg-info/PKG-INFO 2023-01-25T21:06:36,696 writing dependency_links to modelcif.egg-info/dependency_links.txt 2023-01-25T21:06:36,700 writing requirements to modelcif.egg-info/requires.txt 2023-01-25T21:06:36,702 writing top-level names to modelcif.egg-info/top_level.txt 2023-01-25T21:06:36,776 reading manifest file 'modelcif.egg-info/SOURCES.txt' 2023-01-25T21:06:36,783 reading manifest template 'MANIFEST.in' 2023-01-25T21:06:36,785 adding license file 'LICENSE' 2023-01-25T21:06:36,793 writing manifest file 'modelcif.egg-info/SOURCES.txt' 2023-01-25T21:06:36,796 Copying modelcif.egg-info to build/bdist.linux-armv7l/wheel/modelcif-0.7-py3.7.egg-info 2023-01-25T21:06:36,816 running install_scripts 2023-01-25T21:06:37,005 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-01-25T21:06:37,014 creating build/bdist.linux-armv7l/wheel/modelcif-0.7.dist-info/WHEEL 2023-01-25T21:06:37,019 creating '/tmp/pip-wheel-j3q5r444/modelcif-0.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-25T21:06:37,028 adding 'modelcif/__init__.py' 2023-01-25T21:06:37,032 adding 'modelcif/alignment.py' 2023-01-25T21:06:37,035 adding 'modelcif/associated.py' 2023-01-25T21:06:37,038 adding 'modelcif/data.py' 2023-01-25T21:06:37,040 adding 'modelcif/descriptor.py' 2023-01-25T21:06:37,049 adding 'modelcif/dumper.py' 2023-01-25T21:06:37,053 adding 'modelcif/model.py' 2023-01-25T21:06:37,056 adding 'modelcif/protocol.py' 2023-01-25T21:06:37,059 adding 'modelcif/qa_metric.py' 2023-01-25T21:06:37,069 adding 'modelcif/reader.py' 2023-01-25T21:06:37,073 adding 'modelcif/reference.py' 2023-01-25T21:06:37,078 adding 'modelcif-0.7.dist-info/LICENSE' 2023-01-25T21:06:37,080 adding 'modelcif-0.7.dist-info/METADATA' 2023-01-25T21:06:37,082 adding 'modelcif-0.7.dist-info/WHEEL' 2023-01-25T21:06:37,083 adding 'modelcif-0.7.dist-info/top_level.txt' 2023-01-25T21:06:37,085 adding 'modelcif-0.7.dist-info/RECORD' 2023-01-25T21:06:37,088 removing build/bdist.linux-armv7l/wheel 2023-01-25T21:06:37,344 Building wheel for modelcif (setup.py): finished with status 'done' 2023-01-25T21:06:37,353 Created wheel for modelcif: filename=modelcif-0.7-py3-none-any.whl size=36637 sha256=07d83425989a8fc2ea50033649cf34ec26f301302a4fdab4852cced4449eb416 2023-01-25T21:06:37,355 Stored in directory: /tmp/pip-ephem-wheel-cache-ksg2aubu/wheels/06/73/8e/cf1705a651aeeb8fdda798ac747931fa5c240d54f19927da29 2023-01-25T21:06:37,381 Successfully built modelcif 2023-01-25T21:06:37,391 Removed build tracker: '/tmp/pip-build-tracker-h9een_qm'