2023-01-30T03:32:44,110 Created temporary directory: /tmp/pip-ephem-wheel-cache-0ypxiecm
2023-01-30T03:32:44,112 Created temporary directory: /tmp/pip-build-tracker-mfzasl4q
2023-01-30T03:32:44,113 Initialized build tracking at /tmp/pip-build-tracker-mfzasl4q
2023-01-30T03:32:44,113 Created build tracker: /tmp/pip-build-tracker-mfzasl4q
2023-01-30T03:32:44,113 Entered build tracker: /tmp/pip-build-tracker-mfzasl4q
2023-01-30T03:32:44,114 Created temporary directory: /tmp/pip-wheel-psu8zwta
2023-01-30T03:32:44,117 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-01-30T03:32:44,119 Created temporary directory: /tmp/pip-ephem-wheel-cache-e9lc0e1b
2023-01-30T03:32:44,148 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-01-30T03:32:44,151 2 location(s) to search for versions of pybiotk:
2023-01-30T03:32:44,151 * https://pypi.org/simple/pybiotk/
2023-01-30T03:32:44,151 * https://www.piwheels.org/simple/pybiotk/
2023-01-30T03:32:44,152 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2023-01-30T03:32:44,152 Getting page https://pypi.org/simple/pybiotk/
2023-01-30T03:32:44,153 Found index url https://pypi.org/simple
2023-01-30T03:32:44,207 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2023-01-30T03:32:44,209   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2023-01-30T03:32:44,209   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2023-01-30T03:32:44,209   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2023-01-30T03:32:44,210   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2023-01-30T03:32:44,210   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2023-01-30T03:32:44,210   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2023-01-30T03:32:44,211   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2023-01-30T03:32:44,211 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2023-01-30T03:32:44,211 Getting page https://www.piwheels.org/simple/pybiotk/
2023-01-30T03:32:44,212 Found index url https://www.piwheels.org/simple
2023-01-30T03:32:44,389 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2023-01-30T03:32:44,396   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,397   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,397   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,397   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,397   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,398   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,398   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,398   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,398   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,398   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,399   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,399   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,399   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,399   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,399   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,400   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,400   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,400   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,400   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,400   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,401   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,401   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,401   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,401   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,401   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,402   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-01-30T03:32:44,402 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2023-01-30T03:32:44,402 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2023-01-30T03:32:44,421 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2023-01-30T03:32:44,438 Collecting pybiotk==1.1.0
2023-01-30T03:32:44,440   Created temporary directory: /tmp/pip-unpack-4l52fo_7
2023-01-30T03:32:44,490   Downloading pybiotk-1.1.0.tar.gz (93 kB)
2023-01-30T03:32:44,786   Added pybiotk==1.1.0 from https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-mfzasl4q'
2023-01-30T03:32:44,793   Created temporary directory: /tmp/pip-build-env-ayfm4vy0
2023-01-30T03:32:44,801   Installing build dependencies: started
2023-01-30T03:32:44,802   Running command pip subprocess to install build dependencies
2023-01-30T03:32:46,070   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-01-30T03:32:46,490   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-01-30T03:32:46,515   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-01-30T03:32:48,188   Collecting setuptools>=46.1.0
2023-01-30T03:32:48,294     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.0.0-py3-none-any.whl (1.1 MB)
2023-01-30T03:32:48,688   Collecting setuptools_scm[toml]>=5
2023-01-30T03:32:48,716     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB)
2023-01-30T03:32:48,956   Collecting wheel
2023-01-30T03:32:48,973     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-01-30T03:32:50,288   Collecting Cython>=0.29.30
2023-01-30T03:32:50,781     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-01-30T03:32:51,086   Collecting tomli>=1.0.0
2023-01-30T03:32:51,103     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-01-30T03:32:51,289   Collecting packaging>=20.0
2023-01-30T03:32:51,308     Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB)
2023-01-30T03:32:51,415   Collecting typing-extensions
2023-01-30T03:32:51,436     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB)
2023-01-30T03:32:54,016   Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, Cython, setuptools_scm
2023-01-30T03:32:54,198     Creating /tmp/pip-build-env-ayfm4vy0/overlay/bin
2023-01-30T03:32:54,201     changing mode of /tmp/pip-build-env-ayfm4vy0/overlay/bin/wheel to 755
2023-01-30T03:33:00,316     changing mode of /tmp/pip-build-env-ayfm4vy0/overlay/bin/cygdb to 755
2023-01-30T03:33:00,320     changing mode of /tmp/pip-build-env-ayfm4vy0/overlay/bin/cython to 755
2023-01-30T03:33:00,323     changing mode of /tmp/pip-build-env-ayfm4vy0/overlay/bin/cythonize to 755
2023-01-30T03:33:00,551   Successfully installed Cython-0.29.33 packaging-23.0 setuptools-67.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4

2023-01-30T03:33:00,567   [notice] A new release of pip available: 22.3 -> 22.3.1
2023-01-30T03:33:00,567   [notice] To update, run: python3 -m pip install --upgrade pip
2023-01-30T03:33:00,928   Installing build dependencies: finished with status 'done'
2023-01-30T03:33:00,934   Getting requirements to build wheel: started
2023-01-30T03:33:00,935   Running command Getting requirements to build wheel
2023-01-30T03:33:03,773   Compiling src/bx/bitset.pyx because it changed.
2023-01-30T03:33:03,774   Compiling src/bx/cluster.pyx because it changed.
2023-01-30T03:33:03,774   Compiling src/bx/intersection.pyx because it changed.
2023-01-30T03:33:03,774   [1/3] Cythonizing src/bx/bitset.pyx
2023-01-30T03:33:03,774   [2/3] Cythonizing src/bx/cluster.pyx
2023-01-30T03:33:03,774   [3/3] Cythonizing src/bx/intersection.pyx
2023-01-30T03:33:04,086   running egg_info
2023-01-30T03:33:04,093   writing src/pybiotk.egg-info/PKG-INFO
2023-01-30T03:33:04,095   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-01-30T03:33:04,099   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-01-30T03:33:04,101   writing requirements to src/pybiotk.egg-info/requires.txt
2023-01-30T03:33:04,103   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-01-30T03:33:04,183   listing git files failed - pretending there aren't any
2023-01-30T03:33:04,195   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:04,202   adding license file 'LICENSE.txt'
2023-01-30T03:33:04,210   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:04,402   Getting requirements to build wheel: finished with status 'done'
2023-01-30T03:33:04,414   Created temporary directory: /tmp/pip-modern-metadata-nd_poxii
2023-01-30T03:33:04,418   Preparing metadata (pyproject.toml): started
2023-01-30T03:33:04,419   Running command Preparing metadata (pyproject.toml)
2023-01-30T03:33:06,182   running dist_info
2023-01-30T03:33:06,205   creating /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info
2023-01-30T03:33:06,213   writing /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/PKG-INFO
2023-01-30T03:33:06,216   writing dependency_links to /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/dependency_links.txt
2023-01-30T03:33:06,220   writing entry points to /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/entry_points.txt
2023-01-30T03:33:06,222   writing requirements to /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/requires.txt
2023-01-30T03:33:06,223   writing top-level names to /tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/top_level.txt
2023-01-30T03:33:06,225   writing manifest file '/tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:06,297   listing git files failed - pretending there aren't any
2023-01-30T03:33:06,307   reading manifest file '/tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:06,311   adding license file 'LICENSE.txt'
2023-01-30T03:33:06,316   writing manifest file '/tmp/pip-modern-metadata-nd_poxii/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:06,317   creating '/tmp/pip-modern-metadata-nd_poxii/pybiotk-1.1.0.dist-info'
2023-01-30T03:33:06,542   Preparing metadata (pyproject.toml): finished with status 'done'
2023-01-30T03:33:06,549   Source in /tmp/pip-wheel-psu8zwta/pybiotk_b96f4c69f8a94157a26a1cd084758345 has version 1.1.0, which satisfies requirement pybiotk==1.1.0 from https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz
2023-01-30T03:33:06,550   Removed pybiotk==1.1.0 from https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-mfzasl4q'
2023-01-30T03:33:06,554 Created temporary directory: /tmp/pip-unpack-hl03ulmu
2023-01-30T03:33:06,555 Building wheels for collected packages: pybiotk
2023-01-30T03:33:06,560   Created temporary directory: /tmp/pip-wheel-_522s0rb
2023-01-30T03:33:06,560   Destination directory: /tmp/pip-wheel-_522s0rb
2023-01-30T03:33:06,563   Building wheel for pybiotk (pyproject.toml): started
2023-01-30T03:33:06,564   Running command Building wheel for pybiotk (pyproject.toml)
2023-01-30T03:33:08,077   running bdist_wheel
2023-01-30T03:33:08,103   running build
2023-01-30T03:33:08,104   running build_py
2023-01-30T03:33:08,113   creating build/lib.linux-armv7l-cpython-39
2023-01-30T03:33:08,114   creating build/lib.linux-armv7l-cpython-39/pybiotk
2023-01-30T03:33:08,115   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk
2023-01-30T03:33:08,117   creating build/lib.linux-armv7l-cpython-39/stream
2023-01-30T03:33:08,118   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-30T03:33:08,121   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-30T03:33:08,123   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-30T03:33:08,126   creating build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-30T03:33:08,127   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-30T03:33:08,129   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-30T03:33:08,131   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-30T03:33:08,133   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-30T03:33:08,137   creating build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,138   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,140   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,143   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,145   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,147   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,149   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,151   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,153   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,155   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,157   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,160   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,162   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,164   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,166   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,168   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,170   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,172   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,175   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,176   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,179   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,181   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-30T03:33:08,184   creating build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,185   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,187   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,189   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,191   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,192   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,194   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-30T03:33:08,197   creating build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,198   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,200   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,202   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,205   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,207   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,209   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,211   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-30T03:33:08,215   creating build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,216   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,218   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,220   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,222   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,225   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-30T03:33:08,228   creating build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-30T03:33:08,229   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-30T03:33:08,230   running egg_info
2023-01-30T03:33:08,254   writing src/pybiotk.egg-info/PKG-INFO
2023-01-30T03:33:08,256   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-01-30T03:33:08,259   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-01-30T03:33:08,260   writing requirements to src/pybiotk.egg-info/requires.txt
2023-01-30T03:33:08,261   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-01-30T03:33:08,303   listing git files failed - pretending there aren't any
2023-01-30T03:33:08,313   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:08,319   adding license file 'LICENSE.txt'
2023-01-30T03:33:08,326   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-30T03:33:08,331   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-30T03:33:08,334   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-30T03:33:08,342   running build_ext
2023-01-30T03:33:08,348   building 'pybiotk.bx.bitset' extension
2023-01-30T03:33:08,349   creating build/temp.linux-armv7l-cpython-39
2023-01-30T03:33:08,349   creating build/temp.linux-armv7l-cpython-39/build
2023-01-30T03:33:08,350   creating build/temp.linux-armv7l-cpython-39/build/src
2023-01-30T03:33:08,351   creating build/temp.linux-armv7l-cpython-39/build/src/bx
2023-01-30T03:33:08,352   creating build/temp.linux-armv7l-cpython-39/src
2023-01-30T03:33:08,352   creating build/temp.linux-armv7l-cpython-39/src/bx
2023-01-30T03:33:08,354   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o
2023-01-30T03:33:14,053   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o
2023-01-30T03:33:14,454   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-39/src/bx/bits.o
2023-01-30T03:33:14,865   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-39/src/bx/common.o
2023-01-30T03:33:15,060   creating build/lib.linux-armv7l-cpython-39/pybiotk/bx
2023-01-30T03:33:15,060   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o build/temp.linux-armv7l-cpython-39/src/bx/bits.o build/temp.linux-armv7l-cpython-39/src/bx/common.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so
2023-01-30T03:33:15,223   building 'pybiotk.bx.cluster' extension
2023-01-30T03:33:15,224   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o
2023-01-30T03:33:17,284   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o
2023-01-30T03:33:17,781   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so
2023-01-30T03:33:18,001   building 'pybiotk.bx.intersection' extension
2023-01-30T03:33:18,002   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o
2023-01-30T03:33:27,157   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so
2023-01-30T03:33:27,296   running build_scripts
2023-01-30T03:33:27,297   creating build/scripts-3.9
2023-01-30T03:33:27,298   copying rscripts/plot_venn.R -> build/scripts-3.9
2023-01-30T03:33:27,301   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.9
2023-01-30T03:33:27,303   copying rscripts/plot_hist.R -> build/scripts-3.9
2023-01-30T03:33:27,306   copying rscripts/plot_FRiPs.R -> build/scripts-3.9
2023-01-30T03:33:27,308   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.9
2023-01-30T03:33:27,311   copying rscripts/diff_expr_plot.R -> build/scripts-3.9
2023-01-30T03:33:27,314   copying rscripts/plot_rep_cor.R -> build/scripts-3.9
2023-01-30T03:33:27,316   copying rscripts/plot_peak_width.R -> build/scripts-3.9
2023-01-30T03:33:27,319   copying rscripts/peak_anno.R -> build/scripts-3.9
2023-01-30T03:33:27,321   copying rscripts/plot_bar.R -> build/scripts-3.9
2023-01-30T03:33:27,324   copying rscripts/plot_corr.R -> build/scripts-3.9
2023-01-30T03:33:27,326   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.9
2023-01-30T03:33:27,330   copying rscripts/plot_summary.R -> build/scripts-3.9
2023-01-30T03:33:27,333   copying scripts/fasta_u2t.sh -> build/scripts-3.9
2023-01-30T03:33:27,335   copying scripts/gtfparser.sh -> build/scripts-3.9
2023-01-30T03:33:27,338   copying scripts/fastq_len.sh -> build/scripts-3.9
2023-01-30T03:33:27,340   copying scripts/merge_subseq.sh -> build/scripts-3.9
2023-01-30T03:33:27,342   copying scripts/get_chrom_length.sh -> build/scripts-3.9
2023-01-30T03:33:27,345   copying scripts/fasta_len.sh -> build/scripts-3.9
2023-01-30T03:33:27,347   copying scripts/remove_duplicates.sh -> build/scripts-3.9
2023-01-30T03:33:27,372   installing to build/bdist.linux-armv7l/wheel
2023-01-30T03:33:27,373   running install
2023-01-30T03:33:27,399   running install_lib
2023-01-30T03:33:27,410   creating build/bdist.linux-armv7l
2023-01-30T03:33:27,410   creating build/bdist.linux-armv7l/wheel
2023-01-30T03:33:27,413   creating build/bdist.linux-armv7l/wheel/pybiotk
2023-01-30T03:33:27,414   copying build/lib.linux-armv7l-cpython-39/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk
2023-01-30T03:33:27,417   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-30T03:33:27,418   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-30T03:33:27,421   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-30T03:33:27,423   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-30T03:33:27,426   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-30T03:33:27,429   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,431   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,433   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,436   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,439   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,441   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,444   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,446   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,449   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,452   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,455   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,458   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,460   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,463   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,465   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,468   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,470   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,473   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,476   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,478   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,481   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,483   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-30T03:33:27,486   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,488   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,491   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,493   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,495   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,498   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,500   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-30T03:33:27,508   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,509   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,511   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,515   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,518   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,520   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,523   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,526   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-30T03:33:27,530   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-30T03:33:27,532   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-30T03:33:27,545   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-30T03:33:27,563   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-30T03:33:27,571   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,572   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,576   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,578   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,582   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,585   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-30T03:33:27,589   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-30T03:33:27,590   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-30T03:33:27,592   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-30T03:33:27,596   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-30T03:33:27,599   creating build/bdist.linux-armv7l/wheel/stream
2023-01-30T03:33:27,600   copying build/lib.linux-armv7l-cpython-39/stream/pipe.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-30T03:33:27,604   copying build/lib.linux-armv7l-cpython-39/stream/__init__.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-30T03:33:27,606   copying build/lib.linux-armv7l-cpython-39/stream/stream.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-30T03:33:27,608   running install_egg_info
2023-01-30T03:33:27,619   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/pybiotk-1.1.0-py3.9.egg-info
2023-01-30T03:33:27,634   running install_scripts
2023-01-30T03:33:27,672   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data
2023-01-30T03:33:27,673   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,674   copying build/scripts-3.9/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,677   copying build/scripts-3.9/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,679   copying build/scripts-3.9/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,681   copying build/scripts-3.9/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,684   copying build/scripts-3.9/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,686   copying build/scripts-3.9/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,688   copying build/scripts-3.9/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,690   copying build/scripts-3.9/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,692   copying build/scripts-3.9/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,696   copying build/scripts-3.9/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,699   copying build/scripts-3.9/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,701   copying build/scripts-3.9/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,724   copying build/scripts-3.9/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,727   copying build/scripts-3.9/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,729   copying build/scripts-3.9/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,732   copying build/scripts-3.9/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,734   copying build/scripts-3.9/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,738   copying build/scripts-3.9/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,740   copying build/scripts-3.9/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,743   copying build/scripts-3.9/plot_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts
2023-01-30T03:33:27,746   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_venn.R to 755
2023-01-30T03:33:27,746   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/fasta_u2t.sh to 755
2023-01-30T03:33:27,747   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_deeptools_fragmentsize.R to 755
2023-01-30T03:33:27,747   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_hist.R to 755
2023-01-30T03:33:27,748   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/gtfparser.sh to 755
2023-01-30T03:33:27,748   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_FRiPs.R to 755
2023-01-30T03:33:27,749   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/fastq_len.sh to 755
2023-01-30T03:33:27,749   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/merge_subseq.sh to 755
2023-01-30T03:33:27,750   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/diff_expr_DESeq2.R to 755
2023-01-30T03:33:27,750   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/diff_expr_plot.R to 755
2023-01-30T03:33:27,751   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/get_chrom_length.sh to 755
2023-01-30T03:33:27,756   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_rep_cor.R to 755
2023-01-30T03:33:27,757   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_peak_width.R to 755
2023-01-30T03:33:27,757   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/peak_anno.R to 755
2023-01-30T03:33:27,758   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_bar.R to 755
2023-01-30T03:33:27,759   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_corr.R to 755
2023-01-30T03:33:27,759   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/diff_expr_edgeR.R to 755
2023-01-30T03:33:27,760   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/fasta_len.sh to 755
2023-01-30T03:33:27,760   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/remove_duplicates.sh to 755
2023-01-30T03:33:27,761   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.data/scripts/plot_summary.R to 755
2023-01-30T03:33:27,845   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.0.dist-info/WHEEL
2023-01-30T03:33:27,848   creating '/tmp/pip-wheel-_522s0rb/.tmp-_kvqexpf/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-01-30T03:33:27,850   adding 'pybiotk/__init__.py'
2023-01-30T03:33:27,852   adding 'pybiotk/annodb/__init__.py'
2023-01-30T03:33:27,854   adding 'pybiotk/annodb/anno.py'
2023-01-30T03:33:27,856   adding 'pybiotk/annodb/gene.py'
2023-01-30T03:33:27,858   adding 'pybiotk/annodb/merged_transcript.py'
2023-01-30T03:33:27,859   adding 'pybiotk/annodb/transcript.py'
2023-01-30T03:33:27,971   adding 'pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so'
2023-01-30T03:33:28,008   adding 'pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so'
2023-01-30T03:33:28,140   adding 'pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so'
2023-01-30T03:33:28,146   adding 'pybiotk/convert/__init__.py'
2023-01-30T03:33:28,148   adding 'pybiotk/convert/bam2fastx.py'
2023-01-30T03:33:28,149   adding 'pybiotk/convert/bampe_order_by_name.py'
2023-01-30T03:33:28,151   adding 'pybiotk/convert/bed2bedgraph.py'
2023-01-30T03:33:28,152   adding 'pybiotk/convert/fq2fasta.py'
2023-01-30T03:33:28,154   adding 'pybiotk/convert/gtf2bed.py'
2023-01-30T03:33:28,156   adding 'pybiotk/data/__init__.py'
2023-01-30T03:33:28,159   adding 'pybiotk/data/hg38.chrom.sizes'
2023-01-30T03:33:28,160   adding 'pybiotk/data/mm10.chrom.sizes'
2023-01-30T03:33:28,162   adding 'pybiotk/intervals/__init__.py'
2023-01-30T03:33:28,164   adding 'pybiotk/intervals/grange.py'
2023-01-30T03:33:28,165   adding 'pybiotk/intervals/merge_bed3.py'
2023-01-30T03:33:28,167   adding 'pybiotk/intervals/merge_intervals.py'
2023-01-30T03:33:28,169   adding 'pybiotk/io/__init__.py'
2023-01-30T03:33:28,171   adding 'pybiotk/io/bam.py'
2023-01-30T03:33:28,172   adding 'pybiotk/io/bed.py'
2023-01-30T03:33:28,174   adding 'pybiotk/io/bw.py'
2023-01-30T03:33:28,176   adding 'pybiotk/io/fasta.py'
2023-01-30T03:33:28,177   adding 'pybiotk/io/fastq.py'
2023-01-30T03:33:28,180   adding 'pybiotk/io/gtf.py'
2023-01-30T03:33:28,183   adding 'pybiotk/utils/__init__.py'
2023-01-30T03:33:28,184   adding 'pybiotk/utils/bam_random.py'
2023-01-30T03:33:28,186   adding 'pybiotk/utils/fasta_filter.py'
2023-01-30T03:33:28,187   adding 'pybiotk/utils/fastq_join.py'
2023-01-30T03:33:28,189   adding 'pybiotk/utils/fastq_uniq.py'
2023-01-30T03:33:28,190   adding 'pybiotk/utils/fastx_rename.py'
2023-01-30T03:33:28,192   adding 'pybiotk/utils/fragment_size.py'
2023-01-30T03:33:28,194   adding 'pybiotk/utils/genomefetcher.py'
2023-01-30T03:33:28,196   adding 'pybiotk/utils/gtf_filter.py'
2023-01-30T03:33:28,197   adding 'pybiotk/utils/merge_row.py'
2023-01-30T03:33:28,199   adding 'pybiotk/utils/merge_subseq.py'
2023-01-30T03:33:28,201   adding 'pybiotk/utils/normalize.py'
2023-01-30T03:33:28,203   adding 'pybiotk/utils/pyanno.py'
2023-01-30T03:33:28,205   adding 'pybiotk/utils/read_tables.py'
2023-01-30T03:33:28,207   adding 'pybiotk/utils/reference_count.py'
2023-01-30T03:33:28,208   adding 'pybiotk/utils/reverse_fastx.py'
2023-01-30T03:33:28,210   adding 'pybiotk/utils/rmats_filter.py'
2023-01-30T03:33:28,211   adding 'pybiotk/utils/seq_random.py'
2023-01-30T03:33:28,213   adding 'pybiotk/utils/subseq_analysis.py'
2023-01-30T03:33:28,214   adding 'pybiotk/utils/summary_log.py'
2023-01-30T03:33:28,216   adding 'pybiotk/utils/utils.py'
2023-01-30T03:33:28,226   adding 'pybiotk-1.1.0.data/scripts/diff_expr_DESeq2.R'
2023-01-30T03:33:28,227   adding 'pybiotk-1.1.0.data/scripts/diff_expr_edgeR.R'
2023-01-30T03:33:28,229   adding 'pybiotk-1.1.0.data/scripts/diff_expr_plot.R'
2023-01-30T03:33:28,230   adding 'pybiotk-1.1.0.data/scripts/fasta_len.sh'
2023-01-30T03:33:28,232   adding 'pybiotk-1.1.0.data/scripts/fasta_u2t.sh'
2023-01-30T03:33:28,233   adding 'pybiotk-1.1.0.data/scripts/fastq_len.sh'
2023-01-30T03:33:28,234   adding 'pybiotk-1.1.0.data/scripts/get_chrom_length.sh'
2023-01-30T03:33:28,236   adding 'pybiotk-1.1.0.data/scripts/gtfparser.sh'
2023-01-30T03:33:28,237   adding 'pybiotk-1.1.0.data/scripts/merge_subseq.sh'
2023-01-30T03:33:28,239   adding 'pybiotk-1.1.0.data/scripts/peak_anno.R'
2023-01-30T03:33:28,240   adding 'pybiotk-1.1.0.data/scripts/plot_FRiPs.R'
2023-01-30T03:33:28,242   adding 'pybiotk-1.1.0.data/scripts/plot_bar.R'
2023-01-30T03:33:28,243   adding 'pybiotk-1.1.0.data/scripts/plot_corr.R'
2023-01-30T03:33:28,245   adding 'pybiotk-1.1.0.data/scripts/plot_deeptools_fragmentsize.R'
2023-01-30T03:33:28,247   adding 'pybiotk-1.1.0.data/scripts/plot_hist.R'
2023-01-30T03:33:28,249   adding 'pybiotk-1.1.0.data/scripts/plot_peak_width.R'
2023-01-30T03:33:28,250   adding 'pybiotk-1.1.0.data/scripts/plot_rep_cor.R'
2023-01-30T03:33:28,252   adding 'pybiotk-1.1.0.data/scripts/plot_summary.R'
2023-01-30T03:33:28,253   adding 'pybiotk-1.1.0.data/scripts/plot_venn.R'
2023-01-30T03:33:28,255   adding 'pybiotk-1.1.0.data/scripts/remove_duplicates.sh'
2023-01-30T03:33:28,257   adding 'stream/__init__.py'
2023-01-30T03:33:28,259   adding 'stream/pipe.py'
2023-01-30T03:33:28,261   adding 'stream/stream.py'
2023-01-30T03:33:28,262   adding 'pybiotk-1.1.0.dist-info/LICENSE.txt'
2023-01-30T03:33:28,264   adding 'pybiotk-1.1.0.dist-info/METADATA'
2023-01-30T03:33:28,265   adding 'pybiotk-1.1.0.dist-info/WHEEL'
2023-01-30T03:33:28,266   adding 'pybiotk-1.1.0.dist-info/entry_points.txt'
2023-01-30T03:33:28,267   adding 'pybiotk-1.1.0.dist-info/top_level.txt'
2023-01-30T03:33:28,269   adding 'pybiotk-1.1.0.dist-info/RECORD'
2023-01-30T03:33:28,279   removing build/bdist.linux-armv7l/wheel
2023-01-30T03:33:28,467   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2023-01-30T03:33:28,489   Created wheel for pybiotk: filename=pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl size=558434 sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881
2023-01-30T03:33:28,490   Stored in directory: /tmp/pip-ephem-wheel-cache-e9lc0e1b/wheels/b9/da/79/3d2f5562a70d9c4f1c8d1c70257f2011a1ad5942a31d448a52
2023-01-30T03:33:28,504 Successfully built pybiotk
2023-01-30T03:33:28,524 Removed build tracker: '/tmp/pip-build-tracker-mfzasl4q'