2023-01-31T08:57:44,166 Created temporary directory: /tmp/pip-ephem-wheel-cache-5ossykbv
2023-01-31T08:57:44,168 Created temporary directory: /tmp/pip-build-tracker-j8k1ip95
2023-01-31T08:57:44,168 Initialized build tracking at /tmp/pip-build-tracker-j8k1ip95
2023-01-31T08:57:44,168 Created build tracker: /tmp/pip-build-tracker-j8k1ip95
2023-01-31T08:57:44,168 Entered build tracker: /tmp/pip-build-tracker-j8k1ip95
2023-01-31T08:57:44,169 Created temporary directory: /tmp/pip-wheel-ghm2ks1f
2023-01-31T08:57:44,173 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-01-31T08:57:44,175 Created temporary directory: /tmp/pip-ephem-wheel-cache-b_yea7u5
2023-01-31T08:57:44,201 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-01-31T08:57:44,204 2 location(s) to search for versions of pybiotk:
2023-01-31T08:57:44,204 * https://pypi.org/simple/pybiotk/
2023-01-31T08:57:44,204 * https://www.piwheels.org/simple/pybiotk/
2023-01-31T08:57:44,204 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2023-01-31T08:57:44,205 Getting page https://pypi.org/simple/pybiotk/
2023-01-31T08:57:44,206 Found index url https://pypi.org/simple
2023-01-31T08:57:44,258 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2023-01-31T08:57:44,260   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2023-01-31T08:57:44,260   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2023-01-31T08:57:44,261   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2023-01-31T08:57:44,261   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2023-01-31T08:57:44,261   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2023-01-31T08:57:44,261   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2023-01-31T08:57:44,262   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2023-01-31T08:57:44,262   Found link https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.1
2023-01-31T08:57:44,262 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2023-01-31T08:57:44,263 Getting page https://www.piwheels.org/simple/pybiotk/
2023-01-31T08:57:44,264 Found index url https://www.piwheels.org/simple
2023-01-31T08:57:44,439 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2023-01-31T08:57:44,447   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,448   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,448   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,448   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,448   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,449   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,449   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,449   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,449   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,450   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,450   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,450   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,450   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,450   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,451   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,451   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,451   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,451   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,451   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,452   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,452   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,452   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,452   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,452   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,453   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,453   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,453   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,453   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,453   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,454   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-01-31T08:57:44,454 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2023-01-31T08:57:44,454 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2023-01-31T08:57:44,473 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2023-01-31T08:57:44,490 Collecting pybiotk==1.1.1
2023-01-31T08:57:44,492   Created temporary directory: /tmp/pip-unpack-zg7tsipk
2023-01-31T08:57:44,552   Downloading pybiotk-1.1.1.tar.gz (93 kB)
2023-01-31T08:57:44,838   Added pybiotk==1.1.1 from https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-j8k1ip95'
2023-01-31T08:57:44,845   Created temporary directory: /tmp/pip-build-env-yrqdr6h6
2023-01-31T08:57:44,852   Installing build dependencies: started
2023-01-31T08:57:44,853   Running command pip subprocess to install build dependencies
2023-01-31T08:57:46,073   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-01-31T08:57:46,502   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-01-31T08:57:46,527   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-01-31T08:57:48,187   Collecting setuptools>=46.1.0
2023-01-31T08:57:48,325     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.0.0-py3-none-any.whl (1.1 MB)
2023-01-31T08:57:48,797   Collecting setuptools_scm[toml]>=5
2023-01-31T08:57:48,842     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB)
2023-01-31T08:57:49,064   Collecting wheel
2023-01-31T08:57:49,081     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-01-31T08:57:50,431   Collecting Cython>=0.29.30
2023-01-31T08:57:51,103     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-01-31T08:57:51,445   Collecting typing-extensions
2023-01-31T08:57:51,462     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB)
2023-01-31T08:57:51,635   Collecting packaging>=20.0
2023-01-31T08:57:51,652     Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB)
2023-01-31T08:57:51,772   Collecting tomli>=1.0.0
2023-01-31T08:57:51,790     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-01-31T08:57:54,253   Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, Cython, setuptools_scm
2023-01-31T08:57:54,444     Creating /tmp/pip-build-env-yrqdr6h6/overlay/bin
2023-01-31T08:57:54,447     changing mode of /tmp/pip-build-env-yrqdr6h6/overlay/bin/wheel to 755
2023-01-31T08:58:00,571     changing mode of /tmp/pip-build-env-yrqdr6h6/overlay/bin/cygdb to 755
2023-01-31T08:58:00,574     changing mode of /tmp/pip-build-env-yrqdr6h6/overlay/bin/cython to 755
2023-01-31T08:58:00,576     changing mode of /tmp/pip-build-env-yrqdr6h6/overlay/bin/cythonize to 755
2023-01-31T08:58:00,873   Successfully installed Cython-0.29.33 packaging-23.0 setuptools-67.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4

2023-01-31T08:58:00,888   [notice] A new release of pip available: 22.3 -> 22.3.1
2023-01-31T08:58:00,888   [notice] To update, run: python3 -m pip install --upgrade pip
2023-01-31T08:58:01,228   Installing build dependencies: finished with status 'done'
2023-01-31T08:58:01,255   Getting requirements to build wheel: started
2023-01-31T08:58:01,256   Running command Getting requirements to build wheel
2023-01-31T08:58:04,430   Compiling src/bx/bitset.pyx because it changed.
2023-01-31T08:58:04,431   Compiling src/bx/cluster.pyx because it changed.
2023-01-31T08:58:04,431   Compiling src/bx/intersection.pyx because it changed.
2023-01-31T08:58:04,431   [1/3] Cythonizing src/bx/bitset.pyx
2023-01-31T08:58:04,431   [2/3] Cythonizing src/bx/cluster.pyx
2023-01-31T08:58:04,431   [3/3] Cythonizing src/bx/intersection.pyx
2023-01-31T08:58:04,726   running egg_info
2023-01-31T08:58:04,733   writing src/pybiotk.egg-info/PKG-INFO
2023-01-31T08:58:04,736   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-01-31T08:58:04,739   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-01-31T08:58:04,741   writing requirements to src/pybiotk.egg-info/requires.txt
2023-01-31T08:58:04,743   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-01-31T08:58:04,817   listing git files failed - pretending there aren't any
2023-01-31T08:58:04,829   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:04,837   adding license file 'LICENSE.txt'
2023-01-31T08:58:04,844   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:05,036   Getting requirements to build wheel: finished with status 'done'
2023-01-31T08:58:05,049   Created temporary directory: /tmp/pip-modern-metadata-n_gtplpg
2023-01-31T08:58:05,052   Preparing metadata (pyproject.toml): started
2023-01-31T08:58:05,053   Running command Preparing metadata (pyproject.toml)
2023-01-31T08:58:06,498   running dist_info
2023-01-31T08:58:06,520   creating /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info
2023-01-31T08:58:06,527   writing /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/PKG-INFO
2023-01-31T08:58:06,530   writing dependency_links to /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/dependency_links.txt
2023-01-31T08:58:06,534   writing entry points to /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/entry_points.txt
2023-01-31T08:58:06,535   writing requirements to /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/requires.txt
2023-01-31T08:58:06,536   writing top-level names to /tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/top_level.txt
2023-01-31T08:58:06,538   writing manifest file '/tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:06,605   listing git files failed - pretending there aren't any
2023-01-31T08:58:06,615   reading manifest file '/tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:06,619   adding license file 'LICENSE.txt'
2023-01-31T08:58:06,624   writing manifest file '/tmp/pip-modern-metadata-n_gtplpg/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:06,625   creating '/tmp/pip-modern-metadata-n_gtplpg/pybiotk-1.1.1.dist-info'
2023-01-31T08:58:06,857   Preparing metadata (pyproject.toml): finished with status 'done'
2023-01-31T08:58:06,864   Source in /tmp/pip-wheel-ghm2ks1f/pybiotk_6fc2c7e3620542ffba2e92c8bd064fe3 has version 1.1.1, which satisfies requirement pybiotk==1.1.1 from https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz
2023-01-31T08:58:06,865   Removed pybiotk==1.1.1 from https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-j8k1ip95'
2023-01-31T08:58:06,870 Created temporary directory: /tmp/pip-unpack-87v597y2
2023-01-31T08:58:06,870 Building wheels for collected packages: pybiotk
2023-01-31T08:58:06,876   Created temporary directory: /tmp/pip-wheel-mx32w6ys
2023-01-31T08:58:06,876   Destination directory: /tmp/pip-wheel-mx32w6ys
2023-01-31T08:58:06,878   Building wheel for pybiotk (pyproject.toml): started
2023-01-31T08:58:06,879   Running command Building wheel for pybiotk (pyproject.toml)
2023-01-31T08:58:08,416   running bdist_wheel
2023-01-31T08:58:08,442   running build
2023-01-31T08:58:08,442   running build_py
2023-01-31T08:58:08,453   creating build/lib.linux-armv7l-cpython-39
2023-01-31T08:58:08,453   creating build/lib.linux-armv7l-cpython-39/pybiotk
2023-01-31T08:58:08,455   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk
2023-01-31T08:58:08,457   creating build/lib.linux-armv7l-cpython-39/stream
2023-01-31T08:58:08,458   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-31T08:58:08,461   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-31T08:58:08,463   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-39/stream
2023-01-31T08:58:08,466   creating build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-31T08:58:08,467   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-31T08:58:08,469   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-31T08:58:08,471   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-31T08:58:08,472   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-01-31T08:58:08,477   creating build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,477   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,480   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,482   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,484   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,486   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,488   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,490   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,492   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,494   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,497   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,499   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,501   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,503   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,505   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,507   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,509   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,511   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,513   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,515   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,518   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,520   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-01-31T08:58:08,522   creating build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,523   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,525   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,528   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,529   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,531   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,533   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-01-31T08:58:08,536   creating build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,537   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,539   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,542   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,544   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,548   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,555   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,558   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-01-31T08:58:08,562   creating build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,563   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,567   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,569   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,571   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,574   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-01-31T08:58:08,577   creating build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-31T08:58:08,578   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-31T08:58:08,580   running egg_info
2023-01-31T08:58:08,605   writing src/pybiotk.egg-info/PKG-INFO
2023-01-31T08:58:08,607   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-01-31T08:58:08,610   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-01-31T08:58:08,612   writing requirements to src/pybiotk.egg-info/requires.txt
2023-01-31T08:58:08,613   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-01-31T08:58:08,654   listing git files failed - pretending there aren't any
2023-01-31T08:58:08,665   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:08,670   adding license file 'LICENSE.txt'
2023-01-31T08:58:08,677   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-01-31T08:58:08,682   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-31T08:58:08,686   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-01-31T08:58:08,693   running build_ext
2023-01-31T08:58:08,699   building 'pybiotk.bx.bitset' extension
2023-01-31T08:58:08,701   creating build/temp.linux-armv7l-cpython-39
2023-01-31T08:58:08,701   creating build/temp.linux-armv7l-cpython-39/build
2023-01-31T08:58:08,702   creating build/temp.linux-armv7l-cpython-39/build/src
2023-01-31T08:58:08,703   creating build/temp.linux-armv7l-cpython-39/build/src/bx
2023-01-31T08:58:08,704   creating build/temp.linux-armv7l-cpython-39/src
2023-01-31T08:58:08,705   creating build/temp.linux-armv7l-cpython-39/src/bx
2023-01-31T08:58:08,706   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o
2023-01-31T08:58:14,257   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o
2023-01-31T08:58:14,656   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-39/src/bx/bits.o
2023-01-31T08:58:15,076   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-39/src/bx/common.o
2023-01-31T08:58:15,291   creating build/lib.linux-armv7l-cpython-39/pybiotk/bx
2023-01-31T08:58:15,292   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o build/temp.linux-armv7l-cpython-39/src/bx/bits.o build/temp.linux-armv7l-cpython-39/src/bx/common.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so
2023-01-31T08:58:15,434   building 'pybiotk.bx.cluster' extension
2023-01-31T08:58:15,435   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o
2023-01-31T08:58:17,506   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o
2023-01-31T08:58:17,998   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so
2023-01-31T08:58:18,113   building 'pybiotk.bx.intersection' extension
2023-01-31T08:58:18,114   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o
2023-01-31T08:58:27,046   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so
2023-01-31T08:58:27,195   running build_scripts
2023-01-31T08:58:27,196   creating build/scripts-3.9
2023-01-31T08:58:27,198   copying rscripts/plot_venn.R -> build/scripts-3.9
2023-01-31T08:58:27,220   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.9
2023-01-31T08:58:27,223   copying rscripts/plot_hist.R -> build/scripts-3.9
2023-01-31T08:58:27,226   copying rscripts/plot_FRiPs.R -> build/scripts-3.9
2023-01-31T08:58:27,229   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.9
2023-01-31T08:58:27,232   copying rscripts/diff_expr_plot.R -> build/scripts-3.9
2023-01-31T08:58:27,235   copying rscripts/plot_rep_cor.R -> build/scripts-3.9
2023-01-31T08:58:27,238   copying rscripts/plot_peak_width.R -> build/scripts-3.9
2023-01-31T08:58:27,240   copying rscripts/peak_anno.R -> build/scripts-3.9
2023-01-31T08:58:27,243   copying rscripts/plot_bar.R -> build/scripts-3.9
2023-01-31T08:58:27,246   copying rscripts/plot_corr.R -> build/scripts-3.9
2023-01-31T08:58:27,248   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.9
2023-01-31T08:58:27,252   copying rscripts/plot_summary.R -> build/scripts-3.9
2023-01-31T08:58:27,255   copying scripts/fasta_u2t.sh -> build/scripts-3.9
2023-01-31T08:58:27,257   copying scripts/gtfparser.sh -> build/scripts-3.9
2023-01-31T08:58:27,260   copying scripts/fastq_len.sh -> build/scripts-3.9
2023-01-31T08:58:27,262   copying scripts/merge_subseq.sh -> build/scripts-3.9
2023-01-31T08:58:27,264   copying scripts/get_chrom_length.sh -> build/scripts-3.9
2023-01-31T08:58:27,267   copying scripts/fasta_len.sh -> build/scripts-3.9
2023-01-31T08:58:27,269   copying scripts/remove_duplicates.sh -> build/scripts-3.9
2023-01-31T08:58:27,293   installing to build/bdist.linux-armv7l/wheel
2023-01-31T08:58:27,293   running install
2023-01-31T08:58:27,319   running install_lib
2023-01-31T08:58:27,341   creating build/bdist.linux-armv7l
2023-01-31T08:58:27,344   creating build/bdist.linux-armv7l/wheel
2023-01-31T08:58:27,492   creating build/bdist.linux-armv7l/wheel/pybiotk
2023-01-31T08:58:27,493   copying build/lib.linux-armv7l-cpython-39/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk
2023-01-31T08:58:27,496   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-31T08:58:27,497   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-31T08:58:27,499   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-31T08:58:27,501   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-31T08:58:27,503   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-01-31T08:58:27,507   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,508   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,510   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,513   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,515   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,518   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,520   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,522   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,524   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,526   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,529   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,532   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,534   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,536   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,538   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,540   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,542   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,545   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,547   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,550   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,552   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,554   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-01-31T08:58:27,557   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,558   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,560   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,563   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,565   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,566   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,569   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-01-31T08:58:27,571   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,572   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,574   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,577   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,580   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,583   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,585   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,587   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-01-31T08:58:27,591   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-31T08:58:27,592   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-31T08:58:27,615   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-31T08:58:27,635   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-01-31T08:58:27,642   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,644   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,647   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,649   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,652   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,654   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-01-31T08:58:27,659   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-31T08:58:27,660   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-31T08:58:27,663   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-31T08:58:27,666   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-01-31T08:58:27,669   creating build/bdist.linux-armv7l/wheel/stream
2023-01-31T08:58:27,670   copying build/lib.linux-armv7l-cpython-39/stream/pipe.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-31T08:58:27,673   copying build/lib.linux-armv7l-cpython-39/stream/__init__.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-31T08:58:27,676   copying build/lib.linux-armv7l-cpython-39/stream/stream.py -> build/bdist.linux-armv7l/wheel/stream
2023-01-31T08:58:27,678   running install_egg_info
2023-01-31T08:58:27,689   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/pybiotk-1.1.1-py3.9.egg-info
2023-01-31T08:58:27,707   running install_scripts
2023-01-31T08:58:27,732   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data
2023-01-31T08:58:27,733   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,734   copying build/scripts-3.9/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,737   copying build/scripts-3.9/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,739   copying build/scripts-3.9/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,742   copying build/scripts-3.9/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,744   copying build/scripts-3.9/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,747   copying build/scripts-3.9/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,749   copying build/scripts-3.9/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,752   copying build/scripts-3.9/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,754   copying build/scripts-3.9/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,757   copying build/scripts-3.9/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,760   copying build/scripts-3.9/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,763   copying build/scripts-3.9/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,765   copying build/scripts-3.9/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,768   copying build/scripts-3.9/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,770   copying build/scripts-3.9/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,772   copying build/scripts-3.9/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,775   copying build/scripts-3.9/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,778   copying build/scripts-3.9/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,780   copying build/scripts-3.9/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,783   copying build/scripts-3.9/plot_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts
2023-01-31T08:58:27,786   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_venn.R to 755
2023-01-31T08:58:27,786   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/fasta_u2t.sh to 755
2023-01-31T08:58:27,787   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_deeptools_fragmentsize.R to 755
2023-01-31T08:58:27,788   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_hist.R to 755
2023-01-31T08:58:27,788   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/gtfparser.sh to 755
2023-01-31T08:58:27,789   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_FRiPs.R to 755
2023-01-31T08:58:27,790   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/fastq_len.sh to 755
2023-01-31T08:58:27,790   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/merge_subseq.sh to 755
2023-01-31T08:58:27,791   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/diff_expr_DESeq2.R to 755
2023-01-31T08:58:27,792   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/diff_expr_plot.R to 755
2023-01-31T08:58:27,793   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/get_chrom_length.sh to 755
2023-01-31T08:58:27,793   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_rep_cor.R to 755
2023-01-31T08:58:27,794   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_peak_width.R to 755
2023-01-31T08:58:27,795   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/peak_anno.R to 755
2023-01-31T08:58:27,795   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_bar.R to 755
2023-01-31T08:58:27,796   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_corr.R to 755
2023-01-31T08:58:27,797   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/diff_expr_edgeR.R to 755
2023-01-31T08:58:27,797   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/fasta_len.sh to 755
2023-01-31T08:58:27,798   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/remove_duplicates.sh to 755
2023-01-31T08:58:27,799   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.data/scripts/plot_summary.R to 755
2023-01-31T08:58:27,854   creating build/bdist.linux-armv7l/wheel/pybiotk-1.1.1.dist-info/WHEEL
2023-01-31T08:58:27,858   creating '/tmp/pip-wheel-mx32w6ys/.tmp-1cjnagtj/pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-01-31T08:58:27,861   adding 'pybiotk/__init__.py'
2023-01-31T08:58:27,863   adding 'pybiotk/annodb/__init__.py'
2023-01-31T08:58:27,865   adding 'pybiotk/annodb/anno.py'
2023-01-31T08:58:27,867   adding 'pybiotk/annodb/gene.py'
2023-01-31T08:58:27,869   adding 'pybiotk/annodb/merged_transcript.py'
2023-01-31T08:58:27,871   adding 'pybiotk/annodb/transcript.py'
2023-01-31T08:58:27,991   adding 'pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so'
2023-01-31T08:58:28,042   adding 'pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so'
2023-01-31T08:58:28,173   adding 'pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so'
2023-01-31T08:58:28,179   adding 'pybiotk/convert/__init__.py'
2023-01-31T08:58:28,181   adding 'pybiotk/convert/bam2fastx.py'
2023-01-31T08:58:28,183   adding 'pybiotk/convert/bampe_order_by_name.py'
2023-01-31T08:58:28,184   adding 'pybiotk/convert/bed2bedgraph.py'
2023-01-31T08:58:28,186   adding 'pybiotk/convert/fq2fasta.py'
2023-01-31T08:58:28,188   adding 'pybiotk/convert/gtf2bed.py'
2023-01-31T08:58:28,190   adding 'pybiotk/data/__init__.py'
2023-01-31T08:58:28,193   adding 'pybiotk/data/hg38.chrom.sizes'
2023-01-31T08:58:28,195   adding 'pybiotk/data/mm10.chrom.sizes'
2023-01-31T08:58:28,197   adding 'pybiotk/intervals/__init__.py'
2023-01-31T08:58:28,199   adding 'pybiotk/intervals/grange.py'
2023-01-31T08:58:28,201   adding 'pybiotk/intervals/merge_bed3.py'
2023-01-31T08:58:28,203   adding 'pybiotk/intervals/merge_intervals.py'
2023-01-31T08:58:28,205   adding 'pybiotk/io/__init__.py'
2023-01-31T08:58:28,207   adding 'pybiotk/io/bam.py'
2023-01-31T08:58:28,209   adding 'pybiotk/io/bed.py'
2023-01-31T08:58:28,211   adding 'pybiotk/io/bw.py'
2023-01-31T08:58:28,213   adding 'pybiotk/io/fasta.py'
2023-01-31T08:58:28,215   adding 'pybiotk/io/fastq.py'
2023-01-31T08:58:28,218   adding 'pybiotk/io/gtf.py'
2023-01-31T08:58:28,220   adding 'pybiotk/utils/__init__.py'
2023-01-31T08:58:28,222   adding 'pybiotk/utils/bam_random.py'
2023-01-31T08:58:28,224   adding 'pybiotk/utils/fasta_filter.py'
2023-01-31T08:58:28,226   adding 'pybiotk/utils/fastq_join.py'
2023-01-31T08:58:28,228   adding 'pybiotk/utils/fastq_uniq.py'
2023-01-31T08:58:28,230   adding 'pybiotk/utils/fastx_rename.py'
2023-01-31T08:58:28,231   adding 'pybiotk/utils/fragment_size.py'
2023-01-31T08:58:28,234   adding 'pybiotk/utils/genomefetcher.py'
2023-01-31T08:58:28,236   adding 'pybiotk/utils/gtf_filter.py'
2023-01-31T08:58:28,237   adding 'pybiotk/utils/merge_row.py'
2023-01-31T08:58:28,239   adding 'pybiotk/utils/merge_subseq.py'
2023-01-31T08:58:28,241   adding 'pybiotk/utils/normalize.py'
2023-01-31T08:58:28,243   adding 'pybiotk/utils/pyanno.py'
2023-01-31T08:58:28,245   adding 'pybiotk/utils/read_tables.py'
2023-01-31T08:58:28,247   adding 'pybiotk/utils/reference_count.py'
2023-01-31T08:58:28,249   adding 'pybiotk/utils/reverse_fastx.py'
2023-01-31T08:58:28,251   adding 'pybiotk/utils/rmats_filter.py'
2023-01-31T08:58:28,252   adding 'pybiotk/utils/seq_random.py'
2023-01-31T08:58:28,254   adding 'pybiotk/utils/subseq_analysis.py'
2023-01-31T08:58:28,256   adding 'pybiotk/utils/summary_log.py'
2023-01-31T08:58:28,259   adding 'pybiotk/utils/utils.py'
2023-01-31T08:58:28,262   adding 'pybiotk-1.1.1.data/scripts/diff_expr_DESeq2.R'
2023-01-31T08:58:28,264   adding 'pybiotk-1.1.1.data/scripts/diff_expr_edgeR.R'
2023-01-31T08:58:28,266   adding 'pybiotk-1.1.1.data/scripts/diff_expr_plot.R'
2023-01-31T08:58:28,268   adding 'pybiotk-1.1.1.data/scripts/fasta_len.sh'
2023-01-31T08:58:28,269   adding 'pybiotk-1.1.1.data/scripts/fasta_u2t.sh'
2023-01-31T08:58:28,271   adding 'pybiotk-1.1.1.data/scripts/fastq_len.sh'
2023-01-31T08:58:28,273   adding 'pybiotk-1.1.1.data/scripts/get_chrom_length.sh'
2023-01-31T08:58:28,274   adding 'pybiotk-1.1.1.data/scripts/gtfparser.sh'
2023-01-31T08:58:28,276   adding 'pybiotk-1.1.1.data/scripts/merge_subseq.sh'
2023-01-31T08:58:28,278   adding 'pybiotk-1.1.1.data/scripts/peak_anno.R'
2023-01-31T08:58:28,280   adding 'pybiotk-1.1.1.data/scripts/plot_FRiPs.R'
2023-01-31T08:58:28,281   adding 'pybiotk-1.1.1.data/scripts/plot_bar.R'
2023-01-31T08:58:28,283   adding 'pybiotk-1.1.1.data/scripts/plot_corr.R'
2023-01-31T08:58:28,285   adding 'pybiotk-1.1.1.data/scripts/plot_deeptools_fragmentsize.R'
2023-01-31T08:58:28,287   adding 'pybiotk-1.1.1.data/scripts/plot_hist.R'
2023-01-31T08:58:28,289   adding 'pybiotk-1.1.1.data/scripts/plot_peak_width.R'
2023-01-31T08:58:28,291   adding 'pybiotk-1.1.1.data/scripts/plot_rep_cor.R'
2023-01-31T08:58:28,293   adding 'pybiotk-1.1.1.data/scripts/plot_summary.R'
2023-01-31T08:58:28,295   adding 'pybiotk-1.1.1.data/scripts/plot_venn.R'
2023-01-31T08:58:28,296   adding 'pybiotk-1.1.1.data/scripts/remove_duplicates.sh'
2023-01-31T08:58:28,300   adding 'stream/__init__.py'
2023-01-31T08:58:28,302   adding 'stream/pipe.py'
2023-01-31T08:58:28,304   adding 'stream/stream.py'
2023-01-31T08:58:28,306   adding 'pybiotk-1.1.1.dist-info/LICENSE.txt'
2023-01-31T08:58:28,308   adding 'pybiotk-1.1.1.dist-info/METADATA'
2023-01-31T08:58:28,309   adding 'pybiotk-1.1.1.dist-info/WHEEL'
2023-01-31T08:58:28,310   adding 'pybiotk-1.1.1.dist-info/entry_points.txt'
2023-01-31T08:58:28,312   adding 'pybiotk-1.1.1.dist-info/top_level.txt'
2023-01-31T08:58:28,314   adding 'pybiotk-1.1.1.dist-info/RECORD'
2023-01-31T08:58:28,330   removing build/bdist.linux-armv7l/wheel
2023-01-31T08:58:28,503   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2023-01-31T08:58:28,527   Created wheel for pybiotk: filename=pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl size=558393 sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8
2023-01-31T08:58:28,528   Stored in directory: /tmp/pip-ephem-wheel-cache-b_yea7u5/wheels/b9/61/c3/cd3e5768bde5ff3f350b292d7e17bc1974800084177fcc50b7
2023-01-31T08:58:28,543 Successfully built pybiotk
2023-01-31T08:58:28,567 Removed build tracker: '/tmp/pip-build-tracker-j8k1ip95'