2023-02-02T14:58:22,909 Created temporary directory: /tmp/pip-ephem-wheel-cache-meu4v142 2023-02-02T14:58:22,914 Created temporary directory: /tmp/pip-build-tracker-9610q394 2023-02-02T14:58:22,915 Initialized build tracking at /tmp/pip-build-tracker-9610q394 2023-02-02T14:58:22,915 Created build tracker: /tmp/pip-build-tracker-9610q394 2023-02-02T14:58:22,916 Entered build tracker: /tmp/pip-build-tracker-9610q394 2023-02-02T14:58:22,917 Created temporary directory: /tmp/pip-wheel-lsqodg6j 2023-02-02T14:58:22,925 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-02T14:58:22,930 Created temporary directory: /tmp/pip-ephem-wheel-cache-0q7ts__j 2023-02-02T14:58:22,982 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-02T14:58:22,989 2 location(s) to search for versions of scib: 2023-02-02T14:58:22,989 * https://pypi.org/simple/scib/ 2023-02-02T14:58:22,989 * https://www.piwheels.org/simple/scib/ 2023-02-02T14:58:22,990 Fetching project page and analyzing links: https://pypi.org/simple/scib/ 2023-02-02T14:58:22,991 Getting page https://pypi.org/simple/scib/ 2023-02-02T14:58:22,995 Found index url https://pypi.org/simple 2023-02-02T14:58:23,182 Fetched page https://pypi.org/simple/scib/ as application/vnd.pypi.simple.v1+json 2023-02-02T14:58:23,192 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/10/9c/da43e1b07575cc7e885a0704e7e580d1603765fc633d8f5d8a9f5928c945/scib-1.0.0-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,194 Found link https://files.pythonhosted.org/packages/22/b8/e350757bc55516a7fbd7fde61d9f8b707ddf0f5cd2ed12f63387817eedce/scib-1.0.0.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.0 2023-02-02T14:58:23,195 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/7e/86/bfe1acff3a117e3ce4217302505770d8afdb22728519495f7d4f3205d509/scib-1.0.1-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,196 Found link https://files.pythonhosted.org/packages/41/50/f76907e82dd7b68544ca43197f5a4fb98fee9f1990ab325a64cd8ab5d53b/scib-1.0.1.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.1 2023-02-02T14:58:23,197 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/a6/d5/57dbee153548598cf31f7cc4c95b0b71bbe98dcaffa2f1972e9c908474db/scib-1.0.2-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,198 Found link https://files.pythonhosted.org/packages/54/bb/1b5799a0b7096e10cc70cef74e20dab4371f649702319b8c815feb11cc20/scib-1.0.2.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.2 2023-02-02T14:58:23,199 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/a5/ec/483cbc44a07ed0605b508c50a4251c2fe5693f60ac91c767eac6b51acb73/scib-1.0.3-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,200 Found link https://files.pythonhosted.org/packages/63/19/62ccc501e0a7df531186b1cc7fd8d4fbd471e6e37e6638764fc9781c18fa/scib-1.0.3.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.3 2023-02-02T14:58:23,201 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/7b/83/25b8c5a5f600009f451ebdf4e76bcd2fe1654ed8c7bd9a69de92ffe571e2/scib-1.0.4-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,202 Found link https://files.pythonhosted.org/packages/07/27/5770f37fa9105f90d325f8d7bc53c25784ad3d4ac9fb9238f97c66abae49/scib-1.0.4.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.4 2023-02-02T14:58:23,203 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/09/ad/df06dd5f19753bd6cf1a1682f1523c70d60aeff42034515cd460152d9166/scib-1.0.5-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,205 Found link https://files.pythonhosted.org/packages/00/d5/ae585a177b75c43672ab8b47aeb58528e905b560777b1ec532d25ab12a9b/scib-1.0.5.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.0.5 2023-02-02T14:58:23,205 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/7b/f0/72868b6eff9de4f7de44dc8f09b25210fc3e2a3ae4e65aa5dd0dd175a4b0/scib-1.1.1-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,207 Found link https://files.pythonhosted.org/packages/b8/2d/5e316e19bde57403bf976f573bb3e59b71002c7afee0a92a809e2aed672d/scib-1.1.1.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.1.1 2023-02-02T14:58:23,207 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/8b/5c/c8a02fa53581eba856bb3ae24fe5ea679aa217fe86d64c79404f0beb0795/scib-1.1.2-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,209 Found link https://files.pythonhosted.org/packages/22/7e/e778e6a8aa3be2ff22562445c194185e9c9566e1e03bf37e7f544a0c9305/scib-1.1.2.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.1.2 2023-02-02T14:58:23,209 Skipping link: No binaries permitted for scib: https://files.pythonhosted.org/packages/d2/20/430d434fee94a64d477f1ff12c4041b294f39b668648a8ff18d9ef3db963/scib-1.1.3-1-py3-none-any.whl (from https://pypi.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,211 Found link https://files.pythonhosted.org/packages/91/07/bd5506e6a47df721b300e5384d6188f3e58103b2fb3a7bdca3e621ec53e0/scib-1.1.3.tar.gz (from https://pypi.org/simple/scib/) (requires-python:>=3.7), version: 1.1.3 2023-02-02T14:58:23,212 Fetching project page and analyzing links: https://www.piwheels.org/simple/scib/ 2023-02-02T14:58:23,212 Getting page https://www.piwheels.org/simple/scib/ 2023-02-02T14:58:23,215 Found index url https://www.piwheels.org/simple 2023-02-02T14:58:23,435 Fetched page https://www.piwheels.org/simple/scib/ as text/html 2023-02-02T14:58:23,443 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.1.2-1-py3-none-any.whl#sha256=53f30727ba2269cb53fca93365ff5ce27bbd925bd21b102f1360e0c6c647a7d7 (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,444 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.1.1-1-py3-none-any.whl#sha256=63fffc9296d7e55ad082f937df00d992369f01c53e73dbddfc72f94fd3f4196e (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,444 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.5-1-py3-none-any.whl#sha256=0fc5eed29a74fb3d2998fc0cdab4f2e80b67c04e0b857742db61659852fef51a (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,445 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.4-1-py3-none-any.whl#sha256=f0979c64f941e78023ccdd9443339c55c620eadcf05f06224359946fa17bc7e2 (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,446 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.3-1-py3-none-any.whl#sha256=80490ff74c95c7892522ddba73a54acfbbb6ca14200c68a25dbcf1d69969df93 (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,446 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.2-1-py3-none-any.whl#sha256=698589ff9d5cede77ac9a0fce95f7322af521401a86f13f49849cae8e422ec57 (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,447 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.1-1-py3-none-any.whl#sha256=83926e36ba76c4e67d24321b4be2b9913d33b8b3dcf166ff1c4f33965d4decea (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,447 Skipping link: No binaries permitted for scib: https://www.piwheels.org/simple/scib/scib-1.0.0-1-py3-none-any.whl#sha256=3ca7168126396ecbe27544974e001404d860907b5538d13be6d9c8da41f3ec3e (from https://www.piwheels.org/simple/scib/) (requires-python:>=3.7) 2023-02-02T14:58:23,448 Skipping link: not a file: https://www.piwheels.org/simple/scib/ 2023-02-02T14:58:23,448 Skipping link: not a file: https://pypi.org/simple/scib/ 2023-02-02T14:58:23,488 Given no hashes to check 1 links for project 'scib': discarding no candidates 2023-02-02T14:58:23,519 Collecting scib==1.1.3 2023-02-02T14:58:23,523 Created temporary directory: /tmp/pip-unpack-gi0ntbhl 2023-02-02T14:58:23,785 Downloading scib-1.1.3.tar.gz (73 kB) 2023-02-02T14:58:24,046 Added scib==1.1.3 from https://files.pythonhosted.org/packages/91/07/bd5506e6a47df721b300e5384d6188f3e58103b2fb3a7bdca3e621ec53e0/scib-1.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-9610q394' 2023-02-02T14:58:24,055 Created temporary directory: /tmp/pip-build-env-bu4bi7r8 2023-02-02T14:58:24,066 Installing build dependencies: started 2023-02-02T14:58:24,069 Running command pip subprocess to install build dependencies 2023-02-02T14:58:26,765 Using pip 22.3.1 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-02-02T14:58:27,562 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-02T14:58:27,616 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-02T14:58:31,524 Collecting setuptools 2023-02-02T14:58:31,772 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.1.0-py3-none-any.whl (1.1 MB) 2023-02-02T14:58:32,491 Collecting wheel 2023-02-02T14:58:32,528 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-02-02T14:58:38,099 Installing collected packages: wheel, setuptools 2023-02-02T14:58:38,385 Creating /tmp/pip-build-env-bu4bi7r8/overlay/bin 2023-02-02T14:58:38,390 changing mode of /tmp/pip-build-env-bu4bi7r8/overlay/bin/wheel to 755 2023-02-02T14:58:42,773 Successfully installed setuptools-67.1.0 wheel-0.38.4 2023-02-02T14:58:43,222 Installing build dependencies: finished with status 'done' 2023-02-02T14:58:43,234 Getting requirements to build wheel: started 2023-02-02T14:58:43,237 Running command Getting requirements to build wheel 2023-02-02T14:58:44,556 Compile knn_graph C++ code for LISI metric... 2023-02-02T14:58:54,301 running egg_info 2023-02-02T14:58:54,311 writing scib.egg-info/PKG-INFO 2023-02-02T14:58:54,316 writing dependency_links to scib.egg-info/dependency_links.txt 2023-02-02T14:58:54,322 writing requirements to scib.egg-info/requires.txt 2023-02-02T14:58:54,324 writing top-level names to scib.egg-info/top_level.txt 2023-02-02T14:58:54,378 reading manifest file 'scib.egg-info/SOURCES.txt' 2023-02-02T14:58:54,384 reading manifest template 'MANIFEST.in' 2023-02-02T14:58:54,385 adding license file 'LICENSE.txt' 2023-02-02T14:58:54,394 writing manifest file 'scib.egg-info/SOURCES.txt' 2023-02-02T14:58:54,535 Getting requirements to build wheel: finished with status 'done' 2023-02-02T14:58:54,554 Created temporary directory: /tmp/pip-modern-metadata-tbf00ls3 2023-02-02T14:58:54,560 Preparing metadata (pyproject.toml): started 2023-02-02T14:58:54,562 Running command Preparing metadata (pyproject.toml) 2023-02-02T14:58:55,849 Compile knn_graph C++ code for LISI metric... 2023-02-02T14:59:05,230 running dist_info 2023-02-02T14:59:05,273 creating /tmp/pip-modern-metadata-tbf00ls3/scib.egg-info 2023-02-02T14:59:05,282 writing /tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/PKG-INFO 2023-02-02T14:59:05,289 writing dependency_links to /tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/dependency_links.txt 2023-02-02T14:59:05,295 writing requirements to /tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/requires.txt 2023-02-02T14:59:05,297 writing top-level names to /tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/top_level.txt 2023-02-02T14:59:05,300 writing manifest file '/tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/SOURCES.txt' 2023-02-02T14:59:05,353 reading manifest file '/tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/SOURCES.txt' 2023-02-02T14:59:05,375 reading manifest template 'MANIFEST.in' 2023-02-02T14:59:05,377 adding license file 'LICENSE.txt' 2023-02-02T14:59:05,384 writing manifest file '/tmp/pip-modern-metadata-tbf00ls3/scib.egg-info/SOURCES.txt' 2023-02-02T14:59:05,386 creating '/tmp/pip-modern-metadata-tbf00ls3/scib-1.1.3.dist-info' 2023-02-02T14:59:05,747 Preparing metadata (pyproject.toml): finished with status 'done' 2023-02-02T14:59:05,764 Source in /tmp/pip-wheel-lsqodg6j/scib_7ed45a7845fb45fcb69fdd87abc8eb32 has version 1.1.3, which satisfies requirement scib==1.1.3 from https://files.pythonhosted.org/packages/91/07/bd5506e6a47df721b300e5384d6188f3e58103b2fb3a7bdca3e621ec53e0/scib-1.1.3.tar.gz 2023-02-02T14:59:05,766 Removed scib==1.1.3 from https://files.pythonhosted.org/packages/91/07/bd5506e6a47df721b300e5384d6188f3e58103b2fb3a7bdca3e621ec53e0/scib-1.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-9610q394' 2023-02-02T14:59:05,783 Created temporary directory: /tmp/pip-unpack-m3j910ku 2023-02-02T14:59:05,784 Building wheels for collected packages: scib 2023-02-02T14:59:05,794 Created temporary directory: /tmp/pip-wheel-8w7srryt 2023-02-02T14:59:05,794 Destination directory: /tmp/pip-wheel-8w7srryt 2023-02-02T14:59:05,799 Building wheel for scib (pyproject.toml): started 2023-02-02T14:59:05,801 Running command Building wheel for scib (pyproject.toml) 2023-02-02T14:59:07,075 Compile knn_graph C++ code for LISI metric... 2023-02-02T14:59:16,537 running bdist_wheel 2023-02-02T14:59:16,613 running build 2023-02-02T14:59:16,614 running build_py 2023-02-02T14:59:16,631 creating build 2023-02-02T14:59:16,632 creating build/lib 2023-02-02T14:59:16,634 creating build/lib/scib 2023-02-02T14:59:16,636 copying scib/__init__.py -> build/lib/scib 2023-02-02T14:59:16,640 copying scib/trajectory_inference.py -> build/lib/scib 2023-02-02T14:59:16,643 copying scib/utils.py -> build/lib/scib 2023-02-02T14:59:16,647 copying scib/_package_tools.py -> build/lib/scib 2023-02-02T14:59:16,650 copying scib/integration.py -> build/lib/scib 2023-02-02T14:59:16,655 copying scib/preprocessing.py -> build/lib/scib 2023-02-02T14:59:16,660 copying scib/exceptions.py -> build/lib/scib 2023-02-02T14:59:16,666 creating build/lib/scib/metrics 2023-02-02T14:59:16,668 copying scib/metrics/__init__.py -> build/lib/scib/metrics 2023-02-02T14:59:16,671 copying scib/metrics/graph_connectivity.py -> build/lib/scib/metrics 2023-02-02T14:59:16,675 copying scib/metrics/cell_cycle.py -> build/lib/scib/metrics 2023-02-02T14:59:16,679 copying scib/metrics/highly_variable_genes.py -> build/lib/scib/metrics 2023-02-02T14:59:16,682 copying scib/metrics/nmi.py -> build/lib/scib/metrics 2023-02-02T14:59:16,686 copying scib/metrics/utils.py -> build/lib/scib/metrics 2023-02-02T14:59:16,690 copying scib/metrics/clustering.py -> build/lib/scib/metrics 2023-02-02T14:59:16,694 copying scib/metrics/ari.py -> build/lib/scib/metrics 2023-02-02T14:59:16,698 copying scib/metrics/trajectory.py -> build/lib/scib/metrics 2023-02-02T14:59:16,702 copying scib/metrics/lisi.py -> build/lib/scib/metrics 2023-02-02T14:59:16,707 copying scib/metrics/isolated_labels.py -> build/lib/scib/metrics 2023-02-02T14:59:16,712 copying scib/metrics/silhouette.py -> build/lib/scib/metrics 2023-02-02T14:59:16,716 copying scib/metrics/pcr.py -> build/lib/scib/metrics 2023-02-02T14:59:16,721 copying scib/metrics/metrics.py -> build/lib/scib/metrics 2023-02-02T14:59:16,725 copying scib/metrics/kbet.py -> build/lib/scib/metrics 2023-02-02T14:59:16,735 creating build/lib/scib/resources 2023-02-02T14:59:16,737 copying scib/resources/g2m_genes_tirosh.txt -> build/lib/scib/resources 2023-02-02T14:59:16,741 copying scib/resources/g2m_genes_tirosh_hm.txt -> build/lib/scib/resources 2023-02-02T14:59:16,745 copying scib/resources/s_genes_tirosh_hm.txt -> build/lib/scib/resources 2023-02-02T14:59:16,749 copying scib/resources/s_genes_tirosh.txt -> build/lib/scib/resources 2023-02-02T14:59:16,753 creating build/lib/scib/knn_graph 2023-02-02T14:59:16,755 copying scib/knn_graph/knn_graph.o -> build/lib/scib/knn_graph 2023-02-02T14:59:16,762 copying scib/knn_graph/README.md -> build/lib/scib/knn_graph 2023-02-02T14:59:16,767 copying scib/knn_graph/makefile -> build/lib/scib/knn_graph 2023-02-02T14:59:16,771 copying scib/knn_graph/knn_graph.cpp -> build/lib/scib/knn_graph 2023-02-02T14:59:16,812 installing to build/bdist.linux-armv7l/wheel 2023-02-02T14:59:16,812 running install 2023-02-02T14:59:16,876 running install_lib 2023-02-02T14:59:16,892 creating build/bdist.linux-armv7l 2023-02-02T14:59:16,893 creating build/bdist.linux-armv7l/wheel 2023-02-02T14:59:16,896 creating build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:16,898 copying build/lib/scib/__init__.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:16,904 creating build/bdist.linux-armv7l/wheel/scib/knn_graph 2023-02-02T14:59:16,905 copying build/lib/scib/knn_graph/knn_graph.o -> build/bdist.linux-armv7l/wheel/scib/knn_graph 2023-02-02T14:59:16,912 copying build/lib/scib/knn_graph/README.md -> build/bdist.linux-armv7l/wheel/scib/knn_graph 2023-02-02T14:59:16,916 copying build/lib/scib/knn_graph/makefile -> build/bdist.linux-armv7l/wheel/scib/knn_graph 2023-02-02T14:59:16,920 copying build/lib/scib/knn_graph/knn_graph.cpp -> build/bdist.linux-armv7l/wheel/scib/knn_graph 2023-02-02T14:59:16,926 creating build/bdist.linux-armv7l/wheel/scib/resources 2023-02-02T14:59:16,928 copying build/lib/scib/resources/g2m_genes_tirosh.txt -> build/bdist.linux-armv7l/wheel/scib/resources 2023-02-02T14:59:16,932 copying build/lib/scib/resources/g2m_genes_tirosh_hm.txt -> build/bdist.linux-armv7l/wheel/scib/resources 2023-02-02T14:59:16,936 copying build/lib/scib/resources/s_genes_tirosh_hm.txt -> build/bdist.linux-armv7l/wheel/scib/resources 2023-02-02T14:59:16,940 copying build/lib/scib/resources/s_genes_tirosh.txt -> build/bdist.linux-armv7l/wheel/scib/resources 2023-02-02T14:59:16,943 copying build/lib/scib/trajectory_inference.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:16,949 creating build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,950 copying build/lib/scib/metrics/__init__.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,954 copying build/lib/scib/metrics/graph_connectivity.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,958 copying build/lib/scib/metrics/cell_cycle.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,962 copying build/lib/scib/metrics/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,966 copying build/lib/scib/metrics/nmi.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,970 copying build/lib/scib/metrics/utils.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,974 copying build/lib/scib/metrics/clustering.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,979 copying build/lib/scib/metrics/ari.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,983 copying build/lib/scib/metrics/trajectory.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,988 copying build/lib/scib/metrics/lisi.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,994 copying build/lib/scib/metrics/isolated_labels.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:16,999 copying build/lib/scib/metrics/silhouette.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:17,003 copying build/lib/scib/metrics/pcr.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:17,007 copying build/lib/scib/metrics/metrics.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:17,011 copying build/lib/scib/metrics/kbet.py -> build/bdist.linux-armv7l/wheel/scib/metrics 2023-02-02T14:59:17,016 copying build/lib/scib/utils.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:17,019 copying build/lib/scib/_package_tools.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:17,023 copying build/lib/scib/integration.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:17,028 copying build/lib/scib/preprocessing.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:17,033 copying build/lib/scib/exceptions.py -> build/bdist.linux-armv7l/wheel/scib 2023-02-02T14:59:17,036 running install_egg_info 2023-02-02T14:59:17,093 running egg_info 2023-02-02T14:59:17,102 writing scib.egg-info/PKG-INFO 2023-02-02T14:59:17,106 writing dependency_links to scib.egg-info/dependency_links.txt 2023-02-02T14:59:17,111 writing requirements to scib.egg-info/requires.txt 2023-02-02T14:59:17,113 writing top-level names to scib.egg-info/top_level.txt 2023-02-02T14:59:17,135 reading manifest file 'scib.egg-info/SOURCES.txt' 2023-02-02T14:59:17,141 reading manifest template 'MANIFEST.in' 2023-02-02T14:59:17,142 adding license file 'LICENSE.txt' 2023-02-02T14:59:17,151 writing manifest file 'scib.egg-info/SOURCES.txt' 2023-02-02T14:59:17,154 Copying scib.egg-info to build/bdist.linux-armv7l/wheel/scib-1.1.3-py3.7.egg-info 2023-02-02T14:59:17,211 running install_scripts 2023-02-02T14:59:17,406 creating build/bdist.linux-armv7l/wheel/scib-1.1.3.dist-info/WHEEL 2023-02-02T14:59:17,411 creating '/tmp/pip-wheel-8w7srryt/.tmp-8_qy7k2t/scib-1.1.3-1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-02T14:59:17,416 adding 'scib/__init__.py' 2023-02-02T14:59:17,419 adding 'scib/_package_tools.py' 2023-02-02T14:59:17,421 adding 'scib/exceptions.py' 2023-02-02T14:59:17,426 adding 'scib/integration.py' 2023-02-02T14:59:17,435 adding 'scib/preprocessing.py' 2023-02-02T14:59:17,439 adding 'scib/trajectory_inference.py' 2023-02-02T14:59:17,442 adding 'scib/utils.py' 2023-02-02T14:59:17,445 adding 'scib/knn_graph/README.md' 2023-02-02T14:59:17,450 adding 'scib/knn_graph/knn_graph.cpp' 2023-02-02T14:59:17,463 adding 'scib/knn_graph/knn_graph.o' 2023-02-02T14:59:17,466 adding 'scib/knn_graph/makefile' 2023-02-02T14:59:17,470 adding 'scib/metrics/__init__.py' 2023-02-02T14:59:17,473 adding 'scib/metrics/ari.py' 2023-02-02T14:59:17,477 adding 'scib/metrics/cell_cycle.py' 2023-02-02T14:59:17,480 adding 'scib/metrics/clustering.py' 2023-02-02T14:59:17,483 adding 'scib/metrics/graph_connectivity.py' 2023-02-02T14:59:17,486 adding 'scib/metrics/highly_variable_genes.py' 2023-02-02T14:59:17,490 adding 'scib/metrics/isolated_labels.py' 2023-02-02T14:59:17,495 adding 'scib/metrics/kbet.py' 2023-02-02T14:59:17,502 adding 'scib/metrics/lisi.py' 2023-02-02T14:59:17,508 adding 'scib/metrics/metrics.py' 2023-02-02T14:59:17,511 adding 'scib/metrics/nmi.py' 2023-02-02T14:59:17,516 adding 'scib/metrics/pcr.py' 2023-02-02T14:59:17,519 adding 'scib/metrics/silhouette.py' 2023-02-02T14:59:17,523 adding 'scib/metrics/trajectory.py' 2023-02-02T14:59:17,526 adding 'scib/metrics/utils.py' 2023-02-02T14:59:17,530 adding 'scib/resources/g2m_genes_tirosh.txt' 2023-02-02T14:59:17,532 adding 'scib/resources/g2m_genes_tirosh_hm.txt' 2023-02-02T14:59:17,534 adding 'scib/resources/s_genes_tirosh.txt' 2023-02-02T14:59:17,537 adding 'scib/resources/s_genes_tirosh_hm.txt' 2023-02-02T14:59:17,541 adding 'scib-1.1.3.dist-info/LICENSE.txt' 2023-02-02T14:59:17,545 adding 'scib-1.1.3.dist-info/METADATA' 2023-02-02T14:59:17,547 adding 'scib-1.1.3.dist-info/WHEEL' 2023-02-02T14:59:17,549 adding 'scib-1.1.3.dist-info/top_level.txt' 2023-02-02T14:59:17,551 adding 'scib-1.1.3.dist-info/RECORD' 2023-02-02T14:59:17,557 removing build/bdist.linux-armv7l/wheel 2023-02-02T14:59:17,745 Building wheel for scib (pyproject.toml): finished with status 'done' 2023-02-02T14:59:17,762 Created wheel for scib: filename=scib-1.1.3-1-py3-none-any.whl size=76444 sha256=8585363f466c16b4e27098174704b57f5b8920cc967545ebb83ee89afdf52aee 2023-02-02T14:59:17,764 Stored in directory: /tmp/pip-ephem-wheel-cache-0q7ts__j/wheels/30/2a/d4/52677ec482b0b9065dc18b131c809dd14d49ca4cb565460385 2023-02-02T14:59:17,796 Successfully built scib 2023-02-02T14:59:17,811 Removed build tracker: '/tmp/pip-build-tracker-9610q394'