2023-02-06T18:36:13,524 Created temporary directory: /tmp/pip-ephem-wheel-cache-r1gvix60
2023-02-06T18:36:13,526 Created temporary directory: /tmp/pip-build-tracker-o64cze29
2023-02-06T18:36:13,526 Initialized build tracking at /tmp/pip-build-tracker-o64cze29
2023-02-06T18:36:13,526 Created build tracker: /tmp/pip-build-tracker-o64cze29
2023-02-06T18:36:13,527 Entered build tracker: /tmp/pip-build-tracker-o64cze29
2023-02-06T18:36:13,527 Created temporary directory: /tmp/pip-wheel-830u0nxi
2023-02-06T18:36:13,530 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-06T18:36:13,533 Created temporary directory: /tmp/pip-ephem-wheel-cache-wdu91tsc
2023-02-06T18:36:13,560 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-06T18:36:13,563 2 location(s) to search for versions of glycopeptidepy:
2023-02-06T18:36:13,563 * https://pypi.org/simple/glycopeptidepy/
2023-02-06T18:36:13,563 * https://www.piwheels.org/simple/glycopeptidepy/
2023-02-06T18:36:13,563 Fetching project page and analyzing links: https://pypi.org/simple/glycopeptidepy/
2023-02-06T18:36:13,564 Getting page https://pypi.org/simple/glycopeptidepy/
2023-02-06T18:36:13,565 Found index url https://pypi.org/simple
2023-02-06T18:36:13,620 Fetched page https://pypi.org/simple/glycopeptidepy/ as application/vnd.pypi.simple.v1+json
2023-02-06T18:36:13,645   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c5/11/eb274d11f4af75f9ac7af58e6ebdc583aea6b01dded7b435087941f16dab/glycopeptidepy-0.0.8-py2.7-win-amd64.egg (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,646   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9e/b8/7b13b5d9a0514c91b0a75ec641e8ccf20fa82ce07baabeff879d3d77a123/glycopeptidepy-0.0.9-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,646   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c4/0b/96db41cababc1eba081cc4c724a9020ab1ef7c91334ac8690ee53540d0e0/glycopeptidepy-0.0.9-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,646   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/0b/d4/f34abe10292754143bf1ecafe6eed20805461c373618212cf1c4ae77ad61/glycopeptidepy-0.0.9-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,646   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/05/7a/a0aa008ddc1fb6fd7e3eca6732e6f5bbcedab39aad7005e1fe59b88aa14c/glycopeptidepy-0.0.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,646   Found link https://files.pythonhosted.org/packages/e1/2c/c4fb4ba198007046e66a5cc18ee1db01e46e453feb59a4149f8c590e550c/glycopeptidepy-0.0.9.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.9
2023-02-06T18:36:13,647   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/ec/53/842ed5b412b030004b831e6927250cdcb0bc1168dd3611ae00a134374b26/glycopeptidepy-0.0.10-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,647   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/98/f1/09c02877e80b6e451dd103c4738d3c26e7280029ceebc7a24ed1ec6b53fb/glycopeptidepy-0.0.10-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,647   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/95/7f/e8e0c6e49e826c913f1a9ab96e0712bf8ec5d43bdd8ec505764eb3ed158c/glycopeptidepy-0.0.10-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,647   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/30/e1/e33561730d84685829b63b88f22431268ec44f97977ea4bc82d4094bb53c/glycopeptidepy-0.0.10-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,648   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b2/ec/6bc59c55fa5b269abbe05a23ccbe62aafdc775faed7f029c9716c80efd32/glycopeptidepy-0.0.10-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,648   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b9/d1/5ff5cb8bed68162e4935cd6a0e08a1c6c6fd1d66c0b23b3f76c56a9f196c/glycopeptidepy-0.0.10-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,648   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/e1/26/f8ddb0b9733f46ca4bc5be43c414f92a42f75548b46a53f5d591775230f9/glycopeptidepy-0.0.10-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,649   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fe/df/c84ddc0792f910d6fb51653200c47c2c0640a4536bc3c6640f17d6f1eebe/glycopeptidepy-0.0.11-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,649   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9f/6f/2f39e13a3c1608105be10209c0d9531b6cb9ad1892940a34352d490dff4d/glycopeptidepy-0.0.11-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,649   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/89/9c/2cc74edae53140509a8f2a6f30e4d7f6ee1daab463e8671f50f49ce58b23/glycopeptidepy-0.0.11-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,649   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/d4/df/b4a6690634f65bf1da0aa278fabb6eb4ca53856d0dc1f288953345a4ff87/glycopeptidepy-0.0.11-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,649   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/dd/df/db6a0c4e47f942a7e739e6a9e7e9aa4c0934fccd8016677ceb4a1b044db5/glycopeptidepy-0.0.11-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,650   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/f4/9b/1d15adc403ef4f712ff1e74d56ad90b51e1bd95f64b5beffbe3037ba7876/glycopeptidepy-0.0.11-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,650   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fc/4d/d88cefab11cf4d38f888190dd9b2b8baa3317a0626592a0bc880017e772f/glycopeptidepy-0.0.11-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,650   Found link https://files.pythonhosted.org/packages/d7/f9/c7f7e7925947e0f2bd174d5bf7c3a93ab818d3803197c752b96a740c5bcc/glycopeptidepy-0.0.11.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.11
2023-02-06T18:36:13,650   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/45/49/ad5af8de14295e63934209845a78d584ba2a6b398a05e6b9daf9c3399984/glycopeptidepy-0.0.12-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,650   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/22/88/a6bba5af3ee627663e40f92665e5bc4081ba70af7da7747bfde059cc05ae/glycopeptidepy-0.0.12-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,651   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b3/30/8c292fd979f741b66941d2465ae660031fa5b9d9ad58ec231f7c06a9715e/glycopeptidepy-0.0.12-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,651   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a1/4f/b94e0b02ff32d2719a902060fd0c1065502ce924bcc9c8c252b15c55791b/glycopeptidepy-0.0.12-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,651   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/e5/6b/d2c15b41d7380dfe1549d0ee6ee7bbbd5cf34bbea7702b5349b871af6c60/glycopeptidepy-0.0.12-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,651   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/2c/af/134f748fd8db60ab32b2839b80bb367b921ec828eec5989ce30f557e0d49/glycopeptidepy-0.0.12-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,651   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c1/9d/1a5873cc1d80b8f082f286137634b76341037db7370caf2f2672901be2df/glycopeptidepy-0.0.12-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,652   Found link https://files.pythonhosted.org/packages/2c/39/dc349656bb780f702d0d7cead9a14420bf8896b9aaf47d266bff3d0d3b20/glycopeptidepy-0.0.12.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.12
2023-02-06T18:36:13,652   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/cb/3b/2188663ffb5404fb0d3f88a52c08b2260e6bcf35c25ca17a1b8f980c611d/glycopeptidepy-0.0.13-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,652   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/84/03/4b94b841e7920e618ec4eaebde248e63b7f03718d92b0f631d165876e3c9/glycopeptidepy-0.0.13-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,652   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4d/b7/81638aba7c13b0899d02efb7467c380499e5fc25ce4a2f0c76ef14e13f2f/glycopeptidepy-0.0.13-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,653   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4d/06/f58c0a8d13fb9a5a7ae5c3909296ae5b160549af8190eb5795b47c5c6e16/glycopeptidepy-0.0.13-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,653   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b1/9c/cb0e3ab6e57a95633847956fb445852aaa35c35e39b5690699f8d958971f/glycopeptidepy-0.0.13-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,653   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/54/be/9bb68a1146ddc8041ec56ba8bd046a3a87bf1efe24019e7c33603c2045b4/glycopeptidepy-0.0.13-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,653   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/3b/ba/2235687d009b637ca4a07879476e61604bd4926ed81846089588d5c5e71b/glycopeptidepy-0.0.13-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,653   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/59/d8/4e07b4fd6da69338056734679d9f29b82e36421489437d3bfecf045beb64/glycopeptidepy-0.0.13-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,654   Found link https://files.pythonhosted.org/packages/62/d2/c2a541d3db2663bcc58e00b725036f06ec9e47e3294266e12960f640f835/glycopeptidepy-0.0.13.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.13
2023-02-06T18:36:13,654   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/3f/59/0420f3f172f2377b6f0bc46cb95706e03a3ed5a38d35f27a47ca1ab38b0d/glycopeptidepy-0.0.14-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,654   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/15/ab/3b822a52a18d0187897787888fdc622c9de7cfd04ab81cf6120fece14b69/glycopeptidepy-0.0.14-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,654   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/52/5d/86f6bb97f4aecd3e731ff17f893f92b918781cd970b8b51617b2b85555ac/glycopeptidepy-0.0.14-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,654   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/d6/02/2bc7b83b513bf0068c0aefa77736713990892045c404e91cf22bc64f47ef/glycopeptidepy-0.0.14-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,655   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fc/61/3f94619c9d735e5301a2382f367e4687e681de1bb08d9a4e4db0a34fb790/glycopeptidepy-0.0.14-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,655   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/2d/7f/a01c05b32818abea951f0fed1ea1f47cb2b916fc38be8a9079044a070aab/glycopeptidepy-0.0.14-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,655   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/93/7c/ef42f13b8f485a0920c61c8e5c16b78251eac30a97d3a8bd415c0dc83097/glycopeptidepy-0.0.14-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,655   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/98/72/04c775104bb27eb168ff8bc2fa51b5b9719791df67f44b5be6e55c907717/glycopeptidepy-0.0.14-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,656   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9a/45/4d5981031ebe59829dc0378c0b2a75cb6a0dbe1a11305e361f3df9b8a69f/glycopeptidepy-0.0.15-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,656   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/bc/c4/4926f1ad1af46ebb08098cb25d7b22fa4ead4dd6e855bf02fac3ed8799be/glycopeptidepy-0.0.15-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,660   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/f8/1c/b12bb318dc2c89ffc71d5c6764107ccd3f557dc334f1b783080439f4e83f/glycopeptidepy-0.0.17-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,661   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/ed/8f/103ab3a91da89c00b6803ec8fffeca125c7f7b70c8c84a7f3a22e5dc9872/glycopeptidepy-0.0.17-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,668   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/01/46/7418c3c89322786d7ff799629131875fb1f0c910af047ff4cdf4952f957d/glycopeptidepy-0.0.21-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,668   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/2f/aa/2adb6f7907859864456067d68f2f8117f92552cebab56826892f7f717884/glycopeptidepy-0.0.21-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,668   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/34/be/f685c1d4ec8f412ba4e544a14beeebe2d55f51bbf42c268e4ed6bd063c69/glycopeptidepy-0.0.21-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,669   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c4/c4/3972890a24e172d24a1e80dbb3ddf914756e9b07ace256272ab936e51de4/glycopeptidepy-0.0.21-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,669   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/e0/f4/4c1493faa7ee50ec765d05d98ec180e4dcd886c81f60a11d3eb80612c6ec/glycopeptidepy-0.0.21-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,669   Found link https://files.pythonhosted.org/packages/8f/92/5619176c3ebeab86dc2c8305bb8433d1b236c6dde06fedf6b68d7f5527d0/glycopeptidepy-0.0.21.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.21
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2023-02-06T18:36:13,670   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/01/2b/1fbeeb00df075f479c8ae0eca5467212f786006b6c4a0a91967602320753/glycopeptidepy-0.0.22-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,670   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/49/10/cb3b8770ae00d3205f541cad904d68824a0d29dcc09da2d34c7fc391e579/glycopeptidepy-0.0.22-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,670   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/14/22/2da468ade9771b959ef0a0c1d5dbf3c0a3c189f0926411847cd440b4050d/glycopeptidepy-0.0.22-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,670   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a0/63/e840f57b768d1525306bfabc201f9a4217ba1cb7fc0f7dc6b8a0020a1ae4/glycopeptidepy-0.0.22-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,671   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/70/6f/5bdf4175a4a93589923a230e1bc8c623c3c9a09e7c3d0072b0c4704987cf/glycopeptidepy-0.0.22-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,671   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/85/a0/892f4835af3e7e4e01c41ca71aa6e68b77119774098e905ac2f64fd32bcc/glycopeptidepy-0.0.22-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,671   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/0b/97/bba6326e7fd7240b4d9d5a4db03339cb81e2d07e6f2ade16b26d2b6dc3bd/glycopeptidepy-0.0.22-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,671   Found link https://files.pythonhosted.org/packages/44/2e/d0285cf3423f12619dcf8aafe32280a08b2ff1ce9debe15a5a27b030e2d4/glycopeptidepy-0.0.22.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.22
2023-02-06T18:36:13,671   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/64/6c/2b4807af26e68c516d2532951e32ac6fe31dfdd7405bd32f1dfc4a645dfc/glycopeptidepy-0.0.23-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,672   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/79/34/196cdde05c51e178dd30584db51bbd009d1e10ea9e21c4f3a7b5dc9f42fe/glycopeptidepy-0.0.23-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,672   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/73/14/9198799fb709ab8286a4369e2e20f16b40af1fbd9087ee751248797f6cb8/glycopeptidepy-0.0.23-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,672   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/5c/13/4f5b37c9025121d267d75ca7be07f783ae4baf2dd3f2c6d2c940ede4d79c/glycopeptidepy-0.0.23-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,672   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/df/1e/28060b9c9b4a3eec741d18e28598e2294ddacbd1314e514d11c8604ec1c2/glycopeptidepy-0.0.23-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,672   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/72/ab/b439a054ebe01d6364faf792e4791e72dd1adc942e8ac2efd2f6633d7e5e/glycopeptidepy-0.0.23-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,673   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4f/12/d6a44435afcb78c3299d3134b32a6c3610b440e3fa6069824136cf44fa1f/glycopeptidepy-0.0.23-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,673   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/32/9e/ed1e9c0fde06668122dd2d63ef8d0f90651439dadd526d0f15c986eedaed/glycopeptidepy-0.0.23-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,673   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/74/d4/1d0ddfc7de8f35ddadcacf172f6f8fef475bf334abca8bd6a59d4ec47a55/glycopeptidepy-0.0.23-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,673   Found link https://files.pythonhosted.org/packages/33/21/3f1e97b40d2c1cdbdfbe013202fde94876f7159e26f83de603c800beb97d/glycopeptidepy-0.0.23.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.23
2023-02-06T18:36:13,673   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/38/94/e04967f77301d7fc9c0e78e9d41896de361d70d70990d62b8e8b0c088098/glycopeptidepy-0.0.24-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,674   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c6/a4/db29affbe1118a1f7f863343de1b3b6a7ebac9b4152cd165ad93ae0069ef/glycopeptidepy-0.0.24-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,674   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/71/ca/68dc5fac96ad704ed9b6c7e1e99bbb3a29168508f1062a45a14d73ef2687/glycopeptidepy-0.0.24-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,674   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/7f/55/945d34f68a72780e5d5c6fca916f70865df688f0ddb3002b580065a491e9/glycopeptidepy-0.0.24-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,674   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b4/53/d71900ba575ed4fd3ce0b4c5982f284fe69e4a78f34985b5a5d3ca8bc432/glycopeptidepy-0.0.24-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,674   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/7d/8d/cfcef0a07a13b235d46757b29d7e8eb72aacf45ba82f95945cf0f81aafa1/glycopeptidepy-0.0.24-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,675   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a1/6e/ce9857256412badaabda449e6932942b883b434c136ea0329a1442ec316c/glycopeptidepy-0.0.24-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,675   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/50/13/4baa1621adb411ffca69c739e45e1902688ce841a80fdf0862c5cf33f1ee/glycopeptidepy-0.0.24-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,675   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/da/5e/a44874144a1e7cc75444b8ac9bcafe9ab5f5ef81815dd333a04c158433e9/glycopeptidepy-0.0.24-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,675   Found link https://files.pythonhosted.org/packages/84/ad/684ca86acc70eb60aebf852dffece7e8b27128b1a2df2b1814a19f1ac95b/glycopeptidepy-0.0.24.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.24
2023-02-06T18:36:13,676 Fetching project page and analyzing links: https://www.piwheels.org/simple/glycopeptidepy/
2023-02-06T18:36:13,676 Getting page https://www.piwheels.org/simple/glycopeptidepy/
2023-02-06T18:36:13,677 Found index url https://www.piwheels.org/simple
2023-02-06T18:36:13,884 Fetched page https://www.piwheels.org/simple/glycopeptidepy/ as text/html
2023-02-06T18:36:13,905   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp37-cp37m-linux_armv7l.whl#sha256=d10d858431fa4364f90a2b9df118d9444e5e6aa98cda4334c1f7ea4be429e8e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,905   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp37-cp37m-linux_armv6l.whl#sha256=d10d858431fa4364f90a2b9df118d9444e5e6aa98cda4334c1f7ea4be429e8e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp39-cp39-linux_armv7l.whl#sha256=67e0afedfc7209235ed5db24eb6fdf9258c11aed45cdeffe86d7a45025dbc2e6 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp39-cp39-linux_armv6l.whl#sha256=67e0afedfc7209235ed5db24eb6fdf9258c11aed45cdeffe86d7a45025dbc2e6 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp37-cp37m-linux_armv7l.whl#sha256=661bb6490daa95f5b30d4a4e6e50b44b656b3cff3d13290eed019e1c830c682e (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp37-cp37m-linux_armv6l.whl#sha256=661bb6490daa95f5b30d4a4e6e50b44b656b3cff3d13290eed019e1c830c682e (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.22-cp39-cp39-linux_armv7l.whl#sha256=565917cd38ef20d058dda0b44d75e2f83b948f70478703b24f1c1685befc51d9 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.22-cp39-cp39-linux_armv6l.whl#sha256=565917cd38ef20d058dda0b44d75e2f83b948f70478703b24f1c1685befc51d9 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.22-cp37-cp37m-linux_armv7l.whl#sha256=a6c85b153a5d3f3c941d1046cc67e868c17aefdc7928ab6b6c846c200f1cd825 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.22-cp37-cp37m-linux_armv6l.whl#sha256=a6c85b153a5d3f3c941d1046cc67e868c17aefdc7928ab6b6c846c200f1cd825 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.21-cp39-cp39-linux_armv7l.whl#sha256=b32909399a7f6c751bc80b61837225463098ba573e439723120afe72ce6f5e19 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.21-cp39-cp39-linux_armv6l.whl#sha256=b32909399a7f6c751bc80b61837225463098ba573e439723120afe72ce6f5e19 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.21-cp37-cp37m-linux_armv7l.whl#sha256=c9f4756403598131037eac5dabb9804debc6b67f7677ecaa1bac80a7401ea8cb (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.21-cp37-cp37m-linux_armv6l.whl#sha256=c9f4756403598131037eac5dabb9804debc6b67f7677ecaa1bac80a7401ea8cb (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.20-cp39-cp39-linux_armv7l.whl#sha256=f94a32bc2266eb80b49b222fa1503cd38ff01332967849e1488b701523aa9e7c (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.20-cp39-cp39-linux_armv6l.whl#sha256=f94a32bc2266eb80b49b222fa1503cd38ff01332967849e1488b701523aa9e7c (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.20-cp37-cp37m-linux_armv7l.whl#sha256=ba5bf3ee5b4bdf1d248d8bdcd53f11d9fcadab22e5192e285081a74c031d7c51 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.20-cp37-cp37m-linux_armv6l.whl#sha256=ba5bf3ee5b4bdf1d248d8bdcd53f11d9fcadab22e5192e285081a74c031d7c51 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.19-cp39-cp39-linux_armv7l.whl#sha256=eb18249fc5b46f01571989c32c22769f2509f095f541a02581546a5c5c79a4e0 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,918   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.11-cp39-cp39-linux_armv7l.whl#sha256=a555b804f33290b7294d8f46ae18345ce11e666ce1a8a12613892a61f05928a5 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,919   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.10-cp37-cp37m-linux_armv7l.whl#sha256=ace8cdcff8419d11f23c192e7c892a66cd296647c08dde058db25f341105fbc0 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-06T18:36:13,920   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp39-cp39-linux_armv7l.whl#sha256=0fe3f95737f2249e76bb8a5232177acd2755d76b4e90ee0cd51e81318a5248be (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,920   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp39-cp39-linux_armv6l.whl#sha256=0fe3f95737f2249e76bb8a5232177acd2755d76b4e90ee0cd51e81318a5248be (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,920   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp37-cp37m-linux_armv7l.whl#sha256=6ae840262993fd30d3cc9886ab9c084101c73d2fe5ff93f6790e38e23c8c45e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,921   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp37-cp37m-linux_armv6l.whl#sha256=6ae840262993fd30d3cc9886ab9c084101c73d2fe5ff93f6790e38e23c8c45e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-06T18:36:13,921 Skipping link: not a file: https://www.piwheels.org/simple/glycopeptidepy/
2023-02-06T18:36:13,921 Skipping link: not a file: https://pypi.org/simple/glycopeptidepy/
2023-02-06T18:36:13,941 Given no hashes to check 1 links for project 'glycopeptidepy': discarding no candidates
2023-02-06T18:36:13,958 Collecting glycopeptidepy==0.0.24
2023-02-06T18:36:13,960   Created temporary directory: /tmp/pip-unpack-27d8odye
2023-02-06T18:36:14,006   Downloading glycopeptidepy-0.0.24.tar.gz (1.4 MB)
2023-02-06T18:36:14,857   Added glycopeptidepy==0.0.24 from https://files.pythonhosted.org/packages/84/ad/684ca86acc70eb60aebf852dffece7e8b27128b1a2df2b1814a19f1ac95b/glycopeptidepy-0.0.24.tar.gz to build tracker '/tmp/pip-build-tracker-o64cze29'
2023-02-06T18:36:14,862   Created temporary directory: /tmp/pip-build-env-x2vhiq7l
2023-02-06T18:36:14,870   Installing build dependencies: started
2023-02-06T18:36:14,871   Running command pip subprocess to install build dependencies
2023-02-06T18:36:16,074   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-02-06T18:36:16,464   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-06T18:36:16,489   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-06T18:36:18,296   Collecting setuptools
2023-02-06T18:36:18,397     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.1.0-py3-none-any.whl (1.1 MB)
2023-02-06T18:36:18,678   Collecting wheel
2023-02-06T18:36:18,696     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-02-06T18:36:20,052   Collecting Cython
2023-02-06T18:36:20,529     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-02-06T18:36:21,090   Collecting glypy
2023-02-06T18:36:21,256     Using cached https://www.piwheels.org/simple/glypy/glypy-1.0.7-cp39-cp39-linux_armv7l.whl (1.5 MB)
2023-02-06T18:36:21,458   Collecting six
2023-02-06T18:36:21,475     Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB)
2023-02-06T18:36:21,614   Collecting hjson
2023-02-06T18:36:21,633     Using cached https://www.piwheels.org/simple/hjson/hjson-3.1.0-py3-none-any.whl (54 kB)
2023-02-06T18:36:23,600   Installing collected packages: hjson, wheel, six, setuptools, Cython, glypy
2023-02-06T18:36:23,859     Creating /tmp/pip-build-env-x2vhiq7l/overlay/bin
2023-02-06T18:36:23,861     changing mode of /tmp/pip-build-env-x2vhiq7l/overlay/bin/hjson to 755
2023-02-06T18:36:24,013     changing mode of /tmp/pip-build-env-x2vhiq7l/overlay/bin/wheel to 755
2023-02-06T18:36:29,101     changing mode of /tmp/pip-build-env-x2vhiq7l/overlay/bin/cygdb to 755
2023-02-06T18:36:29,104     changing mode of /tmp/pip-build-env-x2vhiq7l/overlay/bin/cython to 755
2023-02-06T18:36:29,107     changing mode of /tmp/pip-build-env-x2vhiq7l/overlay/bin/cythonize to 755
2023-02-06T18:36:30,458   Successfully installed Cython-0.29.33 glypy-1.0.7 hjson-3.1.0 setuptools-67.1.0 six-1.16.0 wheel-0.38.4

2023-02-06T18:36:30,473   [notice] A new release of pip available: 22.3 -> 23.0
2023-02-06T18:36:30,473   [notice] To update, run: python3 -m pip install --upgrade pip
2023-02-06T18:36:30,797   Installing build dependencies: finished with status 'done'
2023-02-06T18:36:30,812   Getting requirements to build wheel: started
2023-02-06T18:36:30,813   Running command Getting requirements to build wheel
2023-02-06T18:36:32,935   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/base.pxd
2023-02-06T18:36:32,936     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:34,073   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/fragment.pxd
2023-02-06T18:36:34,073     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:36,543   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd
2023-02-06T18:36:36,543     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:37,741   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd
2023-02-06T18:36:37,741     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:41,922   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd
2023-02-06T18:36:41,922     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:46,529   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/glycan.pxd
2023-02-06T18:36:46,530     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:47,837   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/modification/rule.pxd
2023-02-06T18:36:47,837     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:48,400   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/sequence_methods.pxd
2023-02-06T18:36:48,400     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:50,241   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/algorithm.pyx
2023-02-06T18:36:50,241     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:51,108   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/collectiontools.pxd
2023-02-06T18:36:51,109     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:52,102   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/count_table.pxd
2023-02-06T18:36:52,103     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:54,088   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/parser.pxd
2023-02-06T18:36:54,088     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:55,292   warning: src/glycopeptidepy/_c/parser.pyx:224:23: Unreachable code
2023-02-06T18:36:55,533   /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d/src/glycopeptidepy/_c/structure/modification/source.pxd
2023-02-06T18:36:55,533     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-06T18:36:55,997   Compiling src/glycopeptidepy/_c/collectiontools.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-06T18:36:55,997   Compiling src/glycopeptidepy/_c/count_table.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-06T18:36:55,997   Compiling src/glycopeptidepy/_c/parser.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-06T18:36:55,997   Compiling src/glycopeptidepy/_c/structure/base.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/fragment.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/glycan.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/sequence_methods.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/modification/rule.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/utils/cenum.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/modification/source.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,998   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-06T18:36:55,999   Compiling src/glycopeptidepy/_c/algorithm.pyx because it depends on /tmp/pip-build-env-x2vhiq7l/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-06T18:36:55,999   [ 1/13] Cythonizing src/glycopeptidepy/_c/structure/base.pyx
2023-02-06T18:36:55,999   [ 2/13] Cythonizing src/glycopeptidepy/_c/structure/fragment.pyx
2023-02-06T18:36:55,999   [ 3/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx
2023-02-06T18:36:55,999   [ 4/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx
2023-02-06T18:36:55,999   [ 5/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx
2023-02-06T18:36:55,999   [ 6/13] Cythonizing src/glycopeptidepy/_c/structure/glycan.pyx
2023-02-06T18:36:55,999   [ 7/13] Cythonizing src/glycopeptidepy/_c/structure/modification/rule.pyx
2023-02-06T18:36:55,999   [ 8/13] Cythonizing src/glycopeptidepy/_c/structure/sequence_methods.pyx
2023-02-06T18:36:56,000   [ 9/13] Cythonizing src/glycopeptidepy/_c/algorithm.pyx
2023-02-06T18:36:56,000   [10/13] Cythonizing src/glycopeptidepy/_c/collectiontools.pyx
2023-02-06T18:36:56,000   [11/13] Cythonizing src/glycopeptidepy/_c/count_table.pyx
2023-02-06T18:36:56,000   [12/13] Cythonizing src/glycopeptidepy/_c/parser.pyx
2023-02-06T18:36:56,000   [13/13] Cythonizing src/glycopeptidepy/_c/structure/modification/source.pyx
2023-02-06T18:36:56,089   running egg_info
2023-02-06T18:36:56,095   writing src/glycopeptidepy.egg-info/PKG-INFO
2023-02-06T18:36:56,098   writing dependency_links to src/glycopeptidepy.egg-info/dependency_links.txt
2023-02-06T18:36:56,101   writing requirements to src/glycopeptidepy.egg-info/requires.txt
2023-02-06T18:36:56,102   writing top-level names to src/glycopeptidepy.egg-info/top_level.txt
2023-02-06T18:36:56,147   reading manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:36:56,153   reading manifest template 'MANIFEST.in'
2023-02-06T18:36:56,362   writing manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:36:56,864   Getting requirements to build wheel: finished with status 'done'
2023-02-06T18:36:56,878   Created temporary directory: /tmp/pip-modern-metadata-8llhnaz6
2023-02-06T18:36:56,881   Preparing metadata (pyproject.toml): started
2023-02-06T18:36:56,882   Running command Preparing metadata (pyproject.toml)
2023-02-06T18:36:58,501   running dist_info
2023-02-06T18:36:58,521   creating /tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info
2023-02-06T18:36:58,527   writing /tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/PKG-INFO
2023-02-06T18:36:58,530   writing dependency_links to /tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/dependency_links.txt
2023-02-06T18:36:58,532   writing requirements to /tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/requires.txt
2023-02-06T18:36:58,533   writing top-level names to /tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/top_level.txt
2023-02-06T18:36:58,535   writing manifest file '/tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:36:58,565   reading manifest file '/tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:36:58,567   reading manifest template 'MANIFEST.in'
2023-02-06T18:36:58,754   writing manifest file '/tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:36:58,755   creating '/tmp/pip-modern-metadata-8llhnaz6/glycopeptidepy-0.0.24.dist-info'
2023-02-06T18:36:58,956   Preparing metadata (pyproject.toml): finished with status 'done'
2023-02-06T18:36:58,962   Source in /tmp/pip-wheel-830u0nxi/glycopeptidepy_0675761a4c704b49a336ba4db69ea84d has version 0.0.24, which satisfies requirement glycopeptidepy==0.0.24 from https://files.pythonhosted.org/packages/84/ad/684ca86acc70eb60aebf852dffece7e8b27128b1a2df2b1814a19f1ac95b/glycopeptidepy-0.0.24.tar.gz
2023-02-06T18:36:58,964   Removed glycopeptidepy==0.0.24 from https://files.pythonhosted.org/packages/84/ad/684ca86acc70eb60aebf852dffece7e8b27128b1a2df2b1814a19f1ac95b/glycopeptidepy-0.0.24.tar.gz from build tracker '/tmp/pip-build-tracker-o64cze29'
2023-02-06T18:36:58,968 Created temporary directory: /tmp/pip-unpack-c7uzm3r4
2023-02-06T18:36:58,968 Building wheels for collected packages: glycopeptidepy
2023-02-06T18:36:58,973   Created temporary directory: /tmp/pip-wheel-iar8vxfr
2023-02-06T18:36:58,973   Destination directory: /tmp/pip-wheel-iar8vxfr
2023-02-06T18:36:58,976   Building wheel for glycopeptidepy (pyproject.toml): started
2023-02-06T18:36:58,977   Running command Building wheel for glycopeptidepy (pyproject.toml)
2023-02-06T18:37:00,561   running bdist_wheel
2023-02-06T18:37:00,579   running build
2023-02-06T18:37:00,579   running build_py
2023-02-06T18:37:00,588   creating build
2023-02-06T18:37:00,589   creating build/lib.linux-armv7l-cpython-39
2023-02-06T18:37:00,590   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-06T18:37:00,591   copying src/glycopeptidepy/enzyme.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-06T18:37:00,594   copying src/glycopeptidepy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-06T18:37:00,596   copying src/glycopeptidepy/algorithm.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-06T18:37:00,599   copying src/glycopeptidepy/version.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-06T18:37:00,601   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:00,602   copying src/glycopeptidepy/_c/cythonize.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:00,604   copying src/glycopeptidepy/_c/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:00,607   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,607   copying src/glycopeptidepy/utils/intervals.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,610   copying src/glycopeptidepy/utils/memoize.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,612   copying src/glycopeptidepy/utils/iterators.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,614   copying src/glycopeptidepy/utils/sequence_tree.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,617   copying src/glycopeptidepy/utils/collectiontools.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,619   copying src/glycopeptidepy/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-06T18:37:00,622   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,623   copying src/glycopeptidepy/structure/residue.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,626   copying src/glycopeptidepy/structure/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,628   copying src/glycopeptidepy/structure/fragment.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,631   copying src/glycopeptidepy/structure/composition.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,633   copying src/glycopeptidepy/structure/glycan.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,635   copying src/glycopeptidepy/structure/terminal_group.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,637   copying src/glycopeptidepy/structure/constants.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,639   copying src/glycopeptidepy/structure/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,641   copying src/glycopeptidepy/structure/parser.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,644   copying src/glycopeptidepy/structure/sequence_composition.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-06T18:37:00,647   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-06T18:37:00,648   copying src/glycopeptidepy/test/sequence_test_suite.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-06T18:37:00,651   copying src/glycopeptidepy/test/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-06T18:37:00,653   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,654   copying src/glycopeptidepy/io/mzid.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,657   copying src/glycopeptidepy/io/uniprot.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,660   copying src/glycopeptidepy/io/nextprot.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,661   copying src/glycopeptidepy/io/utils.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,663   copying src/glycopeptidepy/io/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,665   copying src/glycopeptidepy/io/annotation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,668   copying src/glycopeptidepy/io/fasta.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-06T18:37:00,672   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:00,673   copying src/glycopeptidepy/_c/structure/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:00,675   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:00,676   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:00,679   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:00,680   copying src/glycopeptidepy/_c/structure/modification/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:00,682   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:37:00,683   copying src/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:37:00,686   copying src/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:37:00,688   copying src/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:37:00,692   copying src/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:37:00,695   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,696   copying src/glycopeptidepy/structure/modification/modification.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,699   copying src/glycopeptidepy/structure/modification/source.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,701   copying src/glycopeptidepy/structure/modification/descriptors.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,703   copying src/glycopeptidepy/structure/modification/rule.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,707   copying src/glycopeptidepy/structure/modification/utils.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,708   copying src/glycopeptidepy/structure/modification/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,710   copying src/glycopeptidepy/structure/modification/glycosylation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,713   copying src/glycopeptidepy/structure/modification/target.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-06T18:37:00,717   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,718   copying src/glycopeptidepy/structure/sequence/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,720   copying src/glycopeptidepy/structure/sequence/implementation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,723   copying src/glycopeptidepy/structure/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,725   copying src/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,727   copying src/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-06T18:37:00,731   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:00,732   copying src/glycopeptidepy/structure/modification/data/unimod.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:00,735   copying src/glycopeptidepy/structure/modification/data/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:00,737   copying src/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:00,739   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-06T18:37:00,740   copying src/glycopeptidepy/io/cv/term.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-06T18:37:00,743   copying src/glycopeptidepy/io/cv/uniprot_ptm.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-06T18:37:00,745   copying src/glycopeptidepy/io/cv/peff.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-06T18:37:00,747   copying src/glycopeptidepy/io/cv/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-06T18:37:00,749   running egg_info
2023-02-06T18:37:00,770   writing src/glycopeptidepy.egg-info/PKG-INFO
2023-02-06T18:37:00,772   writing dependency_links to src/glycopeptidepy.egg-info/dependency_links.txt
2023-02-06T18:37:00,774   writing requirements to src/glycopeptidepy.egg-info/requires.txt
2023-02-06T18:37:00,775   writing top-level names to src/glycopeptidepy.egg-info/top_level.txt
2023-02-06T18:37:00,792   reading manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:37:00,797   reading manifest template 'MANIFEST.in'
2023-02-06T18:37:00,994   writing manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-06T18:37:01,003   copying src/glycopeptidepy/_c/algorithm.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,016   copying src/glycopeptidepy/_c/algorithm.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,019   copying src/glycopeptidepy/_c/collectiontools.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,028   copying src/glycopeptidepy/_c/collectiontools.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,030   copying src/glycopeptidepy/_c/collectiontools.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,032   copying src/glycopeptidepy/_c/compat.h -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,034   copying src/glycopeptidepy/_c/compat.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,036   copying src/glycopeptidepy/_c/count_table.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,054   copying src/glycopeptidepy/_c/count_table.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,056   copying src/glycopeptidepy/_c/count_table.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,060   copying src/glycopeptidepy/_c/parser.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,070   copying src/glycopeptidepy/_c/parser.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,072   copying src/glycopeptidepy/_c/parser.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-06T18:37:01,075   copying src/glycopeptidepy/_c/structure/base.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,094   copying src/glycopeptidepy/_c/structure/base.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,096   copying src/glycopeptidepy/_c/structure/base.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,099   copying src/glycopeptidepy/_c/structure/constants.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,107   copying src/glycopeptidepy/_c/structure/constants.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,109   copying src/glycopeptidepy/_c/structure/constants.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,111   copying src/glycopeptidepy/_c/structure/fragment.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,142   copying src/glycopeptidepy/_c/structure/fragment.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,145   copying src/glycopeptidepy/_c/structure/fragment.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,149   copying src/glycopeptidepy/_c/structure/glycan.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,171   copying src/glycopeptidepy/_c/structure/glycan.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,173   copying src/glycopeptidepy/_c/structure/glycan.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,176   copying src/glycopeptidepy/_c/structure/sequence_methods.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,197   copying src/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,199   copying src/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-06T18:37:01,202   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,212   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,214   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,216   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,247   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,249   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,253   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,292   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,294   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:37:01,297   copying src/glycopeptidepy/_c/structure/modification/modification.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,307   copying src/glycopeptidepy/_c/structure/modification/modification.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,309   copying src/glycopeptidepy/_c/structure/modification/modification.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,312   copying src/glycopeptidepy/_c/structure/modification/rule.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,336   copying src/glycopeptidepy/_c/structure/modification/rule.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,338   copying src/glycopeptidepy/_c/structure/modification/rule.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,341   copying src/glycopeptidepy/_c/structure/modification/source.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,353   copying src/glycopeptidepy/_c/structure/modification/source.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,355   copying src/glycopeptidepy/_c/structure/modification/source.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,358   copying src/glycopeptidepy/_c/structure/modification/target.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-06T18:37:01,361   copying src/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:01,363   copying src/glycopeptidepy/structure/modification/data/unimod.json -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-06T18:37:01,443   running build_ext
2023-02-06T18:37:01,449   building 'glycopeptidepy._c.collectiontools' extension
2023-02-06T18:37:01,450   creating build/temp.linux-armv7l-cpython-39
2023-02-06T18:37:01,451   creating build/temp.linux-armv7l-cpython-39/src
2023-02-06T18:37:01,452   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy
2023-02-06T18:37:01,453   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c
2023-02-06T18:37:01,454   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/collectiontools.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/collectiontools.o
2023-02-06T18:37:05,415   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/collectiontools.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:05,537   building 'glycopeptidepy._c.count_table' extension
2023-02-06T18:37:05,538   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/count_table.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/count_table.o
2023-02-06T18:37:06,473   src/glycopeptidepy/_c/count_table.c:2444:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_initialize_count_table_bin_freelist’ defined but not used [-Wunused-function]
2023-02-06T18:37:06,474    2444 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_initialize_count_table_bin_freelist(size_t __pyx_v_n, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_inst) {
2023-02-06T18:37:06,474         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-06T18:37:06,475   src/glycopeptidepy/_c/count_table.c:2186:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_get’ defined but not used [-Wunused-function]
2023-02-06T18:37:06,475    2186 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_get(struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_freelist, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin *__pyx_v_bin) {
2023-02-06T18:37:06,475         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-06T18:37:06,476   src/glycopeptidepy/_c/count_table.c:1956:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_put’ defined but not used [-Wunused-function]
2023-02-06T18:37:06,476    1956 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_put(struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_freelist, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin *__pyx_v_bin) {
2023-02-06T18:37:06,477         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-06T18:37:14,167   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/count_table.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:14,308   building 'glycopeptidepy._c.parser' extension
2023-02-06T18:37:14,309   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/parser.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/parser.o
2023-02-06T18:37:14,625   In file included from src/glycopeptidepy/_c/parser.c:763:
2023-02-06T18:37:14,626   src/glycopeptidepy/_c/compat.h:38: warning: "PyInt_Check" redefined
2023-02-06T18:37:14,626      38 | #define PyInt_Check PyLong_Check
2023-02-06T18:37:14,626         |
2023-02-06T18:37:14,629   src/glycopeptidepy/_c/parser.c:670: note: this is the location of the previous definition
2023-02-06T18:37:14,629     670 |   #define PyInt_Check(op)              PyLong_Check(op)
2023-02-06T18:37:14,629         |
2023-02-06T18:37:14,629   In file included from src/glycopeptidepy/_c/parser.c:763:
2023-02-06T18:37:14,629   src/glycopeptidepy/_c/compat.h:39: warning: "PyInt_CheckExact" redefined
2023-02-06T18:37:14,630      39 | #define PyInt_CheckExact PyLong_CheckExact
2023-02-06T18:37:14,630         |
2023-02-06T18:37:14,630   src/glycopeptidepy/_c/parser.c:671: note: this is the location of the previous definition
2023-02-06T18:37:14,630     671 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
2023-02-06T18:37:14,630         |
2023-02-06T18:37:14,641   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_f_14glycopeptidepy_2_c_6parser__cstring_sequence_tokenizer’:
2023-02-06T18:37:14,642   src/glycopeptidepy/_c/parser.c:2004:21: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:14,642    2004 |   __pyx_v_csequence = PyStr_AsString(__pyx_v_sequence);
2023-02-06T18:37:14,642         |                     ^
2023-02-06T18:37:14,671   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_fuse_1__pyx_f_14glycopeptidepy_2_c_6parser__sequence_tokenizer’:
2023-02-06T18:37:14,673   src/glycopeptidepy/_c/parser.c:4494:66: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-06T18:37:14,673    4494 |             if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 295, __pyx_L1_error)
2023-02-06T18:37:14,673         |                                                                  ^~
2023-02-06T18:37:14,681   src/glycopeptidepy/_c/parser.c:4921:66: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-06T18:37:14,681    4921 |             if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 328, __pyx_L1_error)
2023-02-06T18:37:14,681         |                                                                  ^~
2023-02-06T18:37:14,686   src/glycopeptidepy/_c/parser.c:5127:64: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-06T18:37:14,686    5127 |           if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 344, __pyx_L1_error)
2023-02-06T18:37:14,686         |                                                                ^~
2023-02-06T18:37:14,698   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_f_14glycopeptidepy_2_c_6parser_parse_simple’:
2023-02-06T18:37:14,701   src/glycopeptidepy/_c/parser.c:5990:23: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:14,701    5990 |     __pyx_v_csequence = PyStr_AsString(__pyx_v_sequence);
2023-02-06T18:37:14,701         |                       ^
2023-02-06T18:37:20,103   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/parser.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:20,220   building 'glycopeptidepy._c.structure.base' extension
2023-02-06T18:37:20,221   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure
2023-02-06T18:37:20,222   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/base.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/base.o
2023-02-06T18:37:32,343   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/base.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:32,496   building 'glycopeptidepy._c.structure.fragment' extension
2023-02-06T18:37:32,497   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragment.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragment.o
2023-02-06T18:37:32,818   In file included from src/glycopeptidepy/_c/structure/fragment.c:764:
2023-02-06T18:37:32,818   src/glycopeptidepy/_c/compat.h:38: warning: "PyInt_Check" redefined
2023-02-06T18:37:32,818      38 | #define PyInt_Check PyLong_Check
2023-02-06T18:37:32,818         |
2023-02-06T18:37:32,825   src/glycopeptidepy/_c/structure/fragment.c:670: note: this is the location of the previous definition
2023-02-06T18:37:32,825     670 |   #define PyInt_Check(op)              PyLong_Check(op)
2023-02-06T18:37:32,825         |
2023-02-06T18:37:32,825   In file included from src/glycopeptidepy/_c/structure/fragment.c:764:
2023-02-06T18:37:32,825   src/glycopeptidepy/_c/compat.h:39: warning: "PyInt_CheckExact" redefined
2023-02-06T18:37:32,825      39 | #define PyInt_CheckExact PyLong_CheckExact
2023-02-06T18:37:32,826         |
2023-02-06T18:37:32,826   src/glycopeptidepy/_c/structure/fragment.c:671: note: this is the location of the previous definition
2023-02-06T18:37:32,826     671 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
2023-02-06T18:37:32,826         |
2023-02-06T18:37:32,850   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_init_str_ints’:
2023-02-06T18:37:32,851   src/glycopeptidepy/_c/structure/fragment.c:3243:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,852    3243 |     __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
2023-02-06T18:37:32,852         |                   ^
2023-02-06T18:37:32,853   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_get_str_int’:
2023-02-06T18:37:32,855   src/glycopeptidepy/_c/structure/fragment.c:3472:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,855    3472 |   __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
2023-02-06T18:37:32,855         |                 ^
2023-02-06T18:37:32,959   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_15PeptideFragment_get_fragment_name’:
2023-02-06T18:37:32,964   src/glycopeptidepy/_c/structure/fragment.c:10375:22: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,964   10375 |   __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-06T18:37:32,965         |                      ^
2023-02-06T18:37:32,973   src/glycopeptidepy/_c/structure/fragment.c:10690:28: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,974   10690 |         __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-06T18:37:32,974         |                            ^
2023-02-06T18:37:32,980   src/glycopeptidepy/_c/structure/fragment.c:10864:28: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,980   10864 |         __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-06T18:37:32,980         |                            ^
2023-02-06T18:37:32,986   src/glycopeptidepy/_c/structure/fragment.c:11043:24: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-06T18:37:32,987   11043 |     __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-06T18:37:32,987         |                        ^
2023-02-06T18:37:52,766   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragment.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:52,959   building 'glycopeptidepy._c.structure.constants' extension
2023-02-06T18:37:52,960   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/constants.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/constants.o
2023-02-06T18:37:56,022   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/constants.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:37:56,136   building 'glycopeptidepy._c.structure.glycan' extension
2023-02-06T18:37:56,137   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/glycan.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/glycan.o
2023-02-06T18:37:56,504   src/glycopeptidepy/_c/structure/glycan.c: In function ‘__pyx_fuse_0__pyx_f_14glycopeptidepy_2_c_9structure_6glycan_22GlycanCompositionProxy__create’:
2023-02-06T18:37:56,506   src/glycopeptidepy/_c/structure/glycan.c:2608:58: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-06T18:37:56,506    2608 |   if (!(likely(PyString_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "str", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 28, __pyx_L1_error)
2023-02-06T18:37:56,506         |                                                          ^~
2023-02-06T18:38:08,329   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/glycan.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:08,483   building 'glycopeptidepy._c.structure.sequence_methods' extension
2023-02-06T18:38:08,483   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/sequence_methods.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/sequence_methods.o
2023-02-06T18:38:08,982   src/glycopeptidepy/_c/structure/sequence_methods.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_16sequence_methods_add_modification’:
2023-02-06T18:38:08,988   src/glycopeptidepy/_c/structure/sequence_methods.c:11799:37: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-02-06T18:38:08,988   11799 |     __pyx_t_2 = ((__pyx_v_position_ >= ((struct __pyx_vtabstruct_14glycopeptidepy_2_c_9structure_16sequence_methods__PeptideSequenceCore *)__pyx_v_self->__pyx_base.__pyx_vtab)->get_size(__pyx_v_self)) != 0);
2023-02-06T18:38:08,989         |                                     ^~
2023-02-06T18:38:20,865   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/sequence_methods.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:21,017   building 'glycopeptidepy._c.structure.modification.rule' extension
2023-02-06T18:38:21,018   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification
2023-02-06T18:38:21,019   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/rule.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/rule.o
2023-02-06T18:38:28,779   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/rule.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:28,915   building 'glycopeptidepy._c.structure.modification.modification' extension
2023-02-06T18:38:28,916   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/modification.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/modification.o
2023-02-06T18:38:32,935   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/modification.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:33,052   building 'glycopeptidepy._c.structure.modification.source' extension
2023-02-06T18:38:33,053   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/source.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/source.o
2023-02-06T18:38:37,290   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/source.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:37,412   building 'glycopeptidepy._c.structure.fragmentation_strategy.base' extension
2023-02-06T18:38:37,413   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:38:37,414   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.o
2023-02-06T18:38:41,696   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:38:41,817   building 'glycopeptidepy._c.structure.fragmentation_strategy.peptide' extension
2023-02-06T18:38:41,818   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.o
2023-02-06T18:39:09,628   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:39:09,858   building 'glycopeptidepy._c.structure.fragmentation_strategy.glycan' extension
2023-02-06T18:39:09,859   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.o
2023-02-06T18:39:10,325   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_fucosylate_extended’:
2023-02-06T18:39:10,330   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:9538:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare]
2023-02-06T18:39:10,330    9538 |   for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-02-06T18:39:10,330         |                                   ^
2023-02-06T18:39:10,335   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:9554:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare]
2023-02-06T18:39:10,335    9554 |   for (__pyx_t_10 = 1; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-02-06T18:39:10,335         |                                   ^
2023-02-06T18:39:10,418   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_n_glycan_stub_fragments’:
2023-02-06T18:39:10,425   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:13646:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-06T18:39:10,425   13646 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-06T18:39:10,426         |                                 ^
2023-02-06T18:39:10,437   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_o_glycan_stub_fragments’:
2023-02-06T18:39:10,444   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:14270:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2023-02-06T18:39:10,445   14270 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_13; __pyx_t_7+=1) {
2023-02-06T18:39:10,445         |                                 ^
2023-02-06T18:39:10,456   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:14028:7: warning: variable ‘__pyx_t_15’ set but not used [-Wunused-but-set-variable]
2023-02-06T18:39:10,457   14028 |   int __pyx_t_15;
2023-02-06T18:39:10,457         |       ^~~~~~~~~~
2023-02-06T18:39:10,488   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_gag_linker_stub_fragments’:
2023-02-06T18:39:10,496   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:16077:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2023-02-06T18:39:10,497   16077 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_13; __pyx_t_7+=1) {
2023-02-06T18:39:10,497         |                                 ^
2023-02-06T18:39:10,509   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:15835:7: warning: variable ‘__pyx_t_15’ set but not used [-Wunused-but-set-variable]
2023-02-06T18:39:10,510   15835 |   int __pyx_t_15;
2023-02-06T18:39:10,510         |       ^~~~~~~~~~
2023-02-06T18:39:10,535   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_mixed_stub_fragments’:
2023-02-06T18:39:10,545   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17329:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-06T18:39:10,545   17329 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-06T18:39:10,545         |                                 ^
2023-02-06T18:39:10,555   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17387:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-06T18:39:10,555   17387 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-06T18:39:10,555         |                                 ^
2023-02-06T18:39:10,565   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17445:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-06T18:39:10,565   17445 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-06T18:39:10,565         |                                 ^
2023-02-06T18:39:30,268   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:39:30,455   building 'glycopeptidepy._c.algorithm' extension
2023-02-06T18:39:30,455   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/algorithm.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/algorithm.o
2023-02-06T18:39:38,774   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/algorithm.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so
2023-02-06T18:39:38,937   installing to build/bdist.linux-armv7l/wheel
2023-02-06T18:39:38,938   running install
2023-02-06T18:39:38,963   running install_lib
2023-02-06T18:39:38,972   creating build/bdist.linux-armv7l
2023-02-06T18:39:38,973   creating build/bdist.linux-armv7l/wheel
2023-02-06T18:39:38,975   creating build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-06T18:39:38,976   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,977   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/compat.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,980   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/cythonize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,981   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,984   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,992   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,995   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/compat.h -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:38,997   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,000   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,008   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,010   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,012   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,014   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,015   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,026   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,051   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,070   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,084   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,085   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,093   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,094   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,103   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,106   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,109   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,111   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,120   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,122   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,124   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,125   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,156   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,201   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,239   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,241   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-06T18:39:39,272   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,275   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,276   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,279   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/target.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,282   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,284   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,293   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,308   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,310   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,312   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,314   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,323   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,325   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,340   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,342   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,351   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-06T18:39:39,360   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,390   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,392   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,416   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,419   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,422   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,441   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,464   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,466   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,469   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,477   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,478   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,480   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,483   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,510   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,535   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,537   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,561   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,564   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-06T18:39:39,598   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,608   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,623   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-06T18:39:39,625   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-06T18:39:39,629   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,630   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,634   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/memoize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,637   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/iterators.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,639   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/sequence_tree.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,642   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/collectiontools.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,644   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-06T18:39:39,647   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-06T18:39:39,650   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/algorithm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-06T18:39:39,653   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/version.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-06T18:39:39,657   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,659   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:39:39,660   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:39:39,663   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:39:39,666   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:39:39,670   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-06T18:39:39,672   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,676   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,677   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,680   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/source.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,683   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/descriptors.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,686   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/rule.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,689   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,691   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,694   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/glycosylation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,698   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,699   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,702   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/unimod.json -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,741   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,745   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,746   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-06T18:39:39,748   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/target.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-06T18:39:39,751   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,753   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,756   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,758   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,761   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,762   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,765   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/implementation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,768   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,770   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,772   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-06T18:39:39,774   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/terminal_group.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,776   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/constants.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,778   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,780   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/parser.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,783   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-06T18:39:39,786   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-06T18:39:39,787   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/test/sequence_test_suite.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-06T18:39:39,790   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/test/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-06T18:39:39,792   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,793   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/mzid.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,795   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,798   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/nextprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,801   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-06T18:39:39,802   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/term.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-06T18:39:39,804   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-06T18:39:39,806   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/peff.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-06T18:39:39,809   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-06T18:39:39,811   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,813   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,814   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/annotation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,817   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-06T18:39:39,821   running install_egg_info
2023-02-06T18:39:39,834   Copying src/glycopeptidepy.egg-info to build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.24-py3.9.egg-info
2023-02-06T18:39:39,848   running install_scripts
2023-02-06T18:39:39,919   creating build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.24.dist-info/WHEEL
2023-02-06T18:39:39,922   creating '/tmp/pip-wheel-iar8vxfr/.tmp-x4tu4yje/glycopeptidepy-0.0.24-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-02-06T18:39:39,925   adding 'glycopeptidepy/__init__.py'
2023-02-06T18:39:39,927   adding 'glycopeptidepy/algorithm.py'
2023-02-06T18:39:39,929   adding 'glycopeptidepy/enzyme.py'
2023-02-06T18:39:39,931   adding 'glycopeptidepy/version.py'
2023-02-06T18:39:39,933   adding 'glycopeptidepy/_c/__init__.py'
2023-02-06T18:39:39,972   adding 'glycopeptidepy/_c/algorithm.c'
2023-02-06T18:39:40,102   adding 'glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,108   adding 'glycopeptidepy/_c/algorithm.pyx'
2023-02-06T18:39:40,133   adding 'glycopeptidepy/_c/collectiontools.c'
2023-02-06T18:39:40,191   adding 'glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,194   adding 'glycopeptidepy/_c/collectiontools.pxd'
2023-02-06T18:39:40,196   adding 'glycopeptidepy/_c/collectiontools.pyx'
2023-02-06T18:39:40,197   adding 'glycopeptidepy/_c/compat.h'
2023-02-06T18:39:40,198   adding 'glycopeptidepy/_c/compat.pxd'
2023-02-06T18:39:40,258   adding 'glycopeptidepy/_c/count_table.c'
2023-02-06T18:39:40,387   adding 'glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,392   adding 'glycopeptidepy/_c/count_table.pxd'
2023-02-06T18:39:40,396   adding 'glycopeptidepy/_c/count_table.pyx'
2023-02-06T18:39:40,397   adding 'glycopeptidepy/_c/cythonize.py'
2023-02-06T18:39:40,432   adding 'glycopeptidepy/_c/parser.c'
2023-02-06T18:39:40,504   adding 'glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,507   adding 'glycopeptidepy/_c/parser.pxd'
2023-02-06T18:39:40,509   adding 'glycopeptidepy/_c/parser.pyx'
2023-02-06T18:39:40,511   adding 'glycopeptidepy/_c/structure/__init__.py'
2023-02-06T18:39:40,567   adding 'glycopeptidepy/_c/structure/base.c'
2023-02-06T18:39:40,754   adding 'glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,761   adding 'glycopeptidepy/_c/structure/base.pxd'
2023-02-06T18:39:40,763   adding 'glycopeptidepy/_c/structure/base.pyx'
2023-02-06T18:39:40,783   adding 'glycopeptidepy/_c/structure/constants.c'
2023-02-06T18:39:40,830   adding 'glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:40,833   adding 'glycopeptidepy/_c/structure/constants.pxd'
2023-02-06T18:39:40,834   adding 'glycopeptidepy/_c/structure/constants.pyx'
2023-02-06T18:39:40,923   adding 'glycopeptidepy/_c/structure/fragment.c'
2023-02-06T18:39:41,211   adding 'glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:41,221   adding 'glycopeptidepy/_c/structure/fragment.pxd'
2023-02-06T18:39:41,224   adding 'glycopeptidepy/_c/structure/fragment.pyx'
2023-02-06T18:39:41,279   adding 'glycopeptidepy/_c/structure/glycan.c'
2023-02-06T18:39:41,462   adding 'glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:41,469   adding 'glycopeptidepy/_c/structure/glycan.pxd'
2023-02-06T18:39:41,471   adding 'glycopeptidepy/_c/structure/glycan.pyx'
2023-02-06T18:39:41,528   adding 'glycopeptidepy/_c/structure/sequence_methods.c'
2023-02-06T18:39:41,708   adding 'glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:41,714   adding 'glycopeptidepy/_c/structure/sequence_methods.pxd'
2023-02-06T18:39:41,718   adding 'glycopeptidepy/_c/structure/sequence_methods.pyx'
2023-02-06T18:39:41,720   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py'
2023-02-06T18:39:41,747   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.c'
2023-02-06T18:39:41,809   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:41,812   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd'
2023-02-06T18:39:41,814   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx'
2023-02-06T18:39:41,901   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c'
2023-02-06T18:39:42,180   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:42,190   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd'
2023-02-06T18:39:42,194   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx'
2023-02-06T18:39:42,317   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c'
2023-02-06T18:39:42,690   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:42,703   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd'
2023-02-06T18:39:42,706   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx'
2023-02-06T18:39:42,709   adding 'glycopeptidepy/_c/structure/modification/__init__.py'
2023-02-06T18:39:42,734   adding 'glycopeptidepy/_c/structure/modification/modification.c'
2023-02-06T18:39:42,796   adding 'glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:42,800   adding 'glycopeptidepy/_c/structure/modification/modification.pxd'
2023-02-06T18:39:42,801   adding 'glycopeptidepy/_c/structure/modification/modification.pyx'
2023-02-06T18:39:42,840   adding 'glycopeptidepy/_c/structure/modification/rule.c'
2023-02-06T18:39:42,959   adding 'glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:42,964   adding 'glycopeptidepy/_c/structure/modification/rule.pxd'
2023-02-06T18:39:42,966   adding 'glycopeptidepy/_c/structure/modification/rule.pyx'
2023-02-06T18:39:42,991   adding 'glycopeptidepy/_c/structure/modification/source.c'
2023-02-06T18:39:43,057   adding 'glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so'
2023-02-06T18:39:43,060   adding 'glycopeptidepy/_c/structure/modification/source.pxd'
2023-02-06T18:39:43,062   adding 'glycopeptidepy/_c/structure/modification/source.pyx'
2023-02-06T18:39:43,063   adding 'glycopeptidepy/_c/structure/modification/target.pyx'
2023-02-06T18:39:43,065   adding 'glycopeptidepy/io/__init__.py'
2023-02-06T18:39:43,067   adding 'glycopeptidepy/io/annotation.py'
2023-02-06T18:39:43,071   adding 'glycopeptidepy/io/fasta.py'
2023-02-06T18:39:43,073   adding 'glycopeptidepy/io/mzid.py'
2023-02-06T18:39:43,074   adding 'glycopeptidepy/io/nextprot.py'
2023-02-06T18:39:43,077   adding 'glycopeptidepy/io/uniprot.py'
2023-02-06T18:39:43,079   adding 'glycopeptidepy/io/utils.py'
2023-02-06T18:39:43,080   adding 'glycopeptidepy/io/cv/__init__.py'
2023-02-06T18:39:43,082   adding 'glycopeptidepy/io/cv/peff.py'
2023-02-06T18:39:43,084   adding 'glycopeptidepy/io/cv/term.py'
2023-02-06T18:39:43,085   adding 'glycopeptidepy/io/cv/uniprot_ptm.py'
2023-02-06T18:39:43,088   adding 'glycopeptidepy/structure/__init__.py'
2023-02-06T18:39:43,089   adding 'glycopeptidepy/structure/base.py'
2023-02-06T18:39:43,090   adding 'glycopeptidepy/structure/composition.py'
2023-02-06T18:39:43,092   adding 'glycopeptidepy/structure/constants.py'
2023-02-06T18:39:43,095   adding 'glycopeptidepy/structure/fragment.py'
2023-02-06T18:39:43,098   adding 'glycopeptidepy/structure/glycan.py'
2023-02-06T18:39:43,100   adding 'glycopeptidepy/structure/parser.py'
2023-02-06T18:39:43,102   adding 'glycopeptidepy/structure/residue.py'
2023-02-06T18:39:43,104   adding 'glycopeptidepy/structure/sequence_composition.py'
2023-02-06T18:39:43,105   adding 'glycopeptidepy/structure/terminal_group.py'
2023-02-06T18:39:43,107   adding 'glycopeptidepy/structure/fragmentation_strategy/__init__.py'
2023-02-06T18:39:43,108   adding 'glycopeptidepy/structure/fragmentation_strategy/base.py'
2023-02-06T18:39:43,113   adding 'glycopeptidepy/structure/fragmentation_strategy/glycan.py'
2023-02-06T18:39:43,116   adding 'glycopeptidepy/structure/fragmentation_strategy/peptide.py'
2023-02-06T18:39:43,118   adding 'glycopeptidepy/structure/modification/__init__.py'
2023-02-06T18:39:43,119   adding 'glycopeptidepy/structure/modification/descriptors.py'
2023-02-06T18:39:43,121   adding 'glycopeptidepy/structure/modification/glycosylation.py'
2023-02-06T18:39:43,123   adding 'glycopeptidepy/structure/modification/modification.py'
2023-02-06T18:39:43,127   adding 'glycopeptidepy/structure/modification/rule.py'
2023-02-06T18:39:43,129   adding 'glycopeptidepy/structure/modification/source.py'
2023-02-06T18:39:43,131   adding 'glycopeptidepy/structure/modification/target.py'
2023-02-06T18:39:43,133   adding 'glycopeptidepy/structure/modification/utils.py'
2023-02-06T18:39:43,135   adding 'glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv'
2023-02-06T18:39:43,136   adding 'glycopeptidepy/structure/modification/data/__init__.py'
2023-02-06T18:39:43,137   adding 'glycopeptidepy/structure/modification/data/patch_unimod.py'
2023-02-06T18:39:43,206   adding 'glycopeptidepy/structure/modification/data/unimod.json'
2023-02-06T18:39:43,220   adding 'glycopeptidepy/structure/modification/data/unimod.py'
2023-02-06T18:39:43,222   adding 'glycopeptidepy/structure/sequence/__init__.py'
2023-02-06T18:39:43,224   adding 'glycopeptidepy/structure/sequence/base.py'
2023-02-06T18:39:43,226   adding 'glycopeptidepy/structure/sequence/glycosylated_sequence.py'
2023-02-06T18:39:43,228   adding 'glycopeptidepy/structure/sequence/implementation.py'
2023-02-06T18:39:43,229   adding 'glycopeptidepy/structure/sequence/mutable_sequence.py'
2023-02-06T18:39:43,231   adding 'glycopeptidepy/test/__init__.py'
2023-02-06T18:39:43,233   adding 'glycopeptidepy/test/sequence_test_suite.py'
2023-02-06T18:39:43,235   adding 'glycopeptidepy/utils/__init__.py'
2023-02-06T18:39:43,236   adding 'glycopeptidepy/utils/collectiontools.py'
2023-02-06T18:39:43,239   adding 'glycopeptidepy/utils/intervals.py'
2023-02-06T18:39:43,240   adding 'glycopeptidepy/utils/iterators.py'
2023-02-06T18:39:43,241   adding 'glycopeptidepy/utils/memoize.py'
2023-02-06T18:39:43,243   adding 'glycopeptidepy/utils/sequence_tree.py'
2023-02-06T18:39:43,245   adding 'glycopeptidepy-0.0.24.dist-info/METADATA'
2023-02-06T18:39:43,246   adding 'glycopeptidepy-0.0.24.dist-info/WHEEL'
2023-02-06T18:39:43,247   adding 'glycopeptidepy-0.0.24.dist-info/top_level.txt'
2023-02-06T18:39:43,250   adding 'glycopeptidepy-0.0.24.dist-info/RECORD'
2023-02-06T18:39:43,332   removing build/bdist.linux-armv7l/wheel
2023-02-06T18:39:43,530   Building wheel for glycopeptidepy (pyproject.toml): finished with status 'done'
2023-02-06T18:39:43,638   Created wheel for glycopeptidepy: filename=glycopeptidepy-0.0.24-cp39-cp39-linux_armv7l.whl size=5393456 sha256=2cfb05670bd69b51772cadb47b9669034ac0a934ed1b4565a4d92246147154f9
2023-02-06T18:39:43,639   Stored in directory: /tmp/pip-ephem-wheel-cache-wdu91tsc/wheels/c2/e4/45/e8b87d53757b74f7775f24253ff540572e0ee0f1e080a90ff6
2023-02-06T18:39:43,657 Successfully built glycopeptidepy
2023-02-06T18:39:43,815 Removed build tracker: '/tmp/pip-build-tracker-o64cze29'