2023-02-09T19:23:54,953 Created temporary directory: /tmp/pip-ephem-wheel-cache-4y2dupja 2023-02-09T19:23:54,958 Created temporary directory: /tmp/pip-build-tracker-09y0a4wg 2023-02-09T19:23:54,958 Initialized build tracking at /tmp/pip-build-tracker-09y0a4wg 2023-02-09T19:23:54,959 Created build tracker: /tmp/pip-build-tracker-09y0a4wg 2023-02-09T19:23:54,959 Entered build tracker: /tmp/pip-build-tracker-09y0a4wg 2023-02-09T19:23:54,960 Created temporary directory: /tmp/pip-wheel-p5j6xiga 2023-02-09T19:23:54,968 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. 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a file: https://pypi.org/simple/gillespy2/ 2023-02-09T19:23:55,641 Given no hashes to check 1 links for project 'gillespy2': discarding no candidates 2023-02-09T19:23:55,671 Collecting gillespy2==1.8.0 2023-02-09T19:23:55,676 Created temporary directory: /tmp/pip-unpack-awep3jkn 2023-02-09T19:23:55,915 Downloading gillespy2-1.8.0.tar.gz (309 kB) 2023-02-09T19:23:56,838 Added gillespy2==1.8.0 from https://files.pythonhosted.org/packages/f4/fe/9d53528b73b7e6872333d0bc37d4bd5058b08faf6f4b318056c77d49684a/gillespy2-1.8.0.tar.gz to build tracker '/tmp/pip-build-tracker-09y0a4wg' 2023-02-09T19:23:56,841 Running setup.py (path:/tmp/pip-wheel-p5j6xiga/gillespy2_3e4dd70bb1cb4357b18bcc5153ec3a08/setup.py) egg_info for package gillespy2 2023-02-09T19:23:56,842 Created temporary directory: /tmp/pip-pip-egg-info-7emj7ly_ 2023-02-09T19:23:56,843 Preparing metadata (setup.py): started 2023-02-09T19:23:56,845 Running command python setup.py egg_info 2023-02-09T19:23:59,949 running egg_info 2023-02-09T19:23:59,953 creating /tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info 2023-02-09T19:24:00,045 writing /tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/PKG-INFO 2023-02-09T19:24:00,051 writing dependency_links to /tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/dependency_links.txt 2023-02-09T19:24:00,055 writing requirements to /tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/requires.txt 2023-02-09T19:24:00,057 writing top-level names to /tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/top_level.txt 2023-02-09T19:24:00,059 writing manifest file '/tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/SOURCES.txt' 2023-02-09T19:24:00,361 reading manifest file '/tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/SOURCES.txt' 2023-02-09T19:24:00,364 reading manifest template 'MANIFEST.in' 2023-02-09T19:24:00,459 adding license file 'LICENSE' 2023-02-09T19:24:00,480 writing manifest file '/tmp/pip-pip-egg-info-7emj7ly_/gillespy2.egg-info/SOURCES.txt' 2023-02-09T19:24:00,483 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:774: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2023-02-09T19:24:00,483 % (opt, underscore_opt) 2023-02-09T19:24:00,484 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py:264: UserWarning: Unknown distribution option: 'extras_requires' 2023-02-09T19:24:00,484 warnings.warn(msg) 2023-02-09T19:24:00,705 Preparing metadata (setup.py): finished with status 'done' 2023-02-09T19:24:00,720 Source in /tmp/pip-wheel-p5j6xiga/gillespy2_3e4dd70bb1cb4357b18bcc5153ec3a08 has version 1.8.0, which satisfies requirement gillespy2==1.8.0 from https://files.pythonhosted.org/packages/f4/fe/9d53528b73b7e6872333d0bc37d4bd5058b08faf6f4b318056c77d49684a/gillespy2-1.8.0.tar.gz 2023-02-09T19:24:00,722 Removed gillespy2==1.8.0 from https://files.pythonhosted.org/packages/f4/fe/9d53528b73b7e6872333d0bc37d4bd5058b08faf6f4b318056c77d49684a/gillespy2-1.8.0.tar.gz from build tracker '/tmp/pip-build-tracker-09y0a4wg' 2023-02-09T19:24:00,735 Created temporary directory: /tmp/pip-unpack-_uy_db6o 2023-02-09T19:24:00,736 Building wheels for collected packages: gillespy2 2023-02-09T19:24:00,745 Created temporary directory: /tmp/pip-wheel-g3nc3w49 2023-02-09T19:24:00,746 Building wheel for gillespy2 (setup.py): started 2023-02-09T19:24:00,748 Destination directory: /tmp/pip-wheel-g3nc3w49 2023-02-09T19:24:00,748 Running command python setup.py bdist_wheel 2023-02-09T19:24:03,307 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:774: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2023-02-09T19:24:03,308 % (opt, underscore_opt) 2023-02-09T19:24:03,416 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py:264: UserWarning: Unknown distribution option: 'extras_requires' 2023-02-09T19:24:03,416 warnings.warn(msg) 2023-02-09T19:24:03,836 running bdist_wheel 2023-02-09T19:24:04,765 running build 2023-02-09T19:24:04,766 running build_py 2023-02-09T19:24:04,868 creating build 2023-02-09T19:24:04,868 creating build/lib 2023-02-09T19:24:04,870 creating build/lib/gillespy2 2023-02-09T19:24:04,872 copying gillespy2/__init__.py -> build/lib/gillespy2 2023-02-09T19:24:04,876 copying gillespy2/__version__.py -> build/lib/gillespy2 2023-02-09T19:24:04,881 creating build/lib/gillespy2/sbml 2023-02-09T19:24:04,883 copying gillespy2/sbml/SBMLimport.py -> build/lib/gillespy2/sbml 2023-02-09T19:24:04,888 copying gillespy2/sbml/__init__.py -> build/lib/gillespy2/sbml 2023-02-09T19:24:04,891 copying gillespy2/sbml/SBMLexport.py -> build/lib/gillespy2/sbml 2023-02-09T19:24:04,897 creating build/lib/gillespy2/solvers 2023-02-09T19:24:04,898 copying gillespy2/solvers/__init__.py -> build/lib/gillespy2/solvers 2023-02-09T19:24:04,905 creating build/lib/gillespy2/core 2023-02-09T19:24:04,907 copying gillespy2/core/raterule.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,911 copying gillespy2/core/species.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,916 copying gillespy2/core/parameter.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,920 copying gillespy2/core/jsonify.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,924 copying gillespy2/core/model.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,931 copying gillespy2/core/assignmentrule.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,934 copying gillespy2/core/liveGraphing.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,938 copying gillespy2/core/timespan.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,942 copying gillespy2/core/reaction.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,948 copying gillespy2/core/sortableobject.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,951 copying gillespy2/core/events.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,956 copying gillespy2/core/gillespyError.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,959 copying gillespy2/core/gillespySolver.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,963 copying gillespy2/core/cleanup.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,966 copying gillespy2/core/functiondefinition.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,969 copying gillespy2/core/results.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,974 copying gillespy2/core/__init__.py -> build/lib/gillespy2/core 2023-02-09T19:24:04,979 creating build/lib/gillespy2/stochss 2023-02-09T19:24:04,980 copying gillespy2/stochss/StochSSexport.py -> build/lib/gillespy2/stochss 2023-02-09T19:24:04,984 copying gillespy2/stochss/__init__.py -> build/lib/gillespy2/stochss 2023-02-09T19:24:04,989 creating build/lib/gillespy2/solvers/utilities 2023-02-09T19:24:04,990 copying gillespy2/solvers/utilities/solverutils.py -> build/lib/gillespy2/solvers/utilities 2023-02-09T19:24:04,995 copying gillespy2/solvers/utilities/Tau.py -> build/lib/gillespy2/solvers/utilities 2023-02-09T19:24:04,999 copying gillespy2/solvers/utilities/cpp_support_test.py -> build/lib/gillespy2/solvers/utilities 2023-02-09T19:24:05,002 copying gillespy2/solvers/utilities/__init__.py -> build/lib/gillespy2/solvers/utilities 2023-02-09T19:24:05,007 creating build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,008 copying gillespy2/solvers/numpy/tau_hybrid_solver.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,015 copying gillespy2/solvers/numpy/ode_solver.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,020 copying gillespy2/solvers/numpy/ssa_solver.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,025 copying gillespy2/solvers/numpy/__init__.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,028 copying gillespy2/solvers/numpy/tau_leaping_solver.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,033 copying gillespy2/solvers/numpy/CLE_solver.py -> build/lib/gillespy2/solvers/numpy 2023-02-09T19:24:05,039 creating build/lib/gillespy2/solvers/stochkit 2023-02-09T19:24:05,041 copying gillespy2/solvers/stochkit/stochkit_solvers.py -> build/lib/gillespy2/solvers/stochkit 2023-02-09T19:24:05,045 copying gillespy2/solvers/stochkit/__init__.py -> build/lib/gillespy2/solvers/stochkit 2023-02-09T19:24:05,050 creating build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,052 copying gillespy2/solvers/cpp/ode_c_solver.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,056 copying gillespy2/solvers/cpp/ssa_c_solver.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,060 copying gillespy2/solvers/cpp/__init__.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,064 copying gillespy2/solvers/cpp/tau_hybrid_c_solver.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,068 copying gillespy2/solvers/cpp/c_solver.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,073 copying gillespy2/solvers/cpp/c_decoder.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,077 copying gillespy2/solvers/cpp/tau_leaping_c_solver.py -> build/lib/gillespy2/solvers/cpp 2023-02-09T19:24:05,082 creating build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,084 copying gillespy2/solvers/cpp/build/expression.py -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,088 copying gillespy2/solvers/cpp/build/make.py -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,092 copying gillespy2/solvers/cpp/build/build_engine.py -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,096 copying gillespy2/solvers/cpp/build/template_gen.py -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,101 copying gillespy2/solvers/cpp/build/__init__.py -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:05,103 running egg_info 2023-02-09T19:24:05,291 writing gillespy2.egg-info/PKG-INFO 2023-02-09T19:24:05,296 writing dependency_links to gillespy2.egg-info/dependency_links.txt 2023-02-09T19:24:05,300 writing requirements to gillespy2.egg-info/requires.txt 2023-02-09T19:24:05,302 writing top-level names to gillespy2.egg-info/top_level.txt 2023-02-09T19:24:05,418 reading manifest file 'gillespy2.egg-info/SOURCES.txt' 2023-02-09T19:24:05,433 reading manifest template 'MANIFEST.in' 2023-02-09T19:24:05,523 adding license file 'LICENSE' 2023-02-09T19:24:05,552 writing manifest file 'gillespy2.egg-info/SOURCES.txt' 2023-02-09T19:24:05,559 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,560 !! 2023-02-09T19:24:05,561 ############################ 2023-02-09T19:24:05,561 # Package would be ignored # 2023-02-09T19:24:05,561 ############################ 2023-02-09T19:24:05,561 Python recognizes 'gillespy2.solvers.cpp.c_base' as an importable package, 2023-02-09T19:24:05,562 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,562 'gillespy2.solvers.cpp.c_base' has been automatically added to the distribution only 2023-02-09T19:24:05,563 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,563 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,564 Please make sure that 'gillespy2.solvers.cpp.c_base' is included as a package by using 2023-02-09T19:24:05,564 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,564 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,564 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,565 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,565 documentation page. 2023-02-09T19:24:05,566 !! 2023-02-09T19:24:05,567 check.warn(importable) 2023-02-09T19:24:05,567 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.Sundials' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,568 !! 2023-02-09T19:24:05,569 ############################ 2023-02-09T19:24:05,569 # Package would be ignored # 2023-02-09T19:24:05,569 ############################ 2023-02-09T19:24:05,569 Python recognizes 'gillespy2.solvers.cpp.c_base.Sundials' as an importable package, 2023-02-09T19:24:05,570 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,570 'gillespy2.solvers.cpp.c_base.Sundials' has been automatically added to the distribution only 2023-02-09T19:24:05,571 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,571 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,571 Please make sure that 'gillespy2.solvers.cpp.c_base.Sundials' is included as a package by using 2023-02-09T19:24:05,572 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,572 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,572 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,573 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,573 documentation page. 2023-02-09T19:24:05,574 !! 2023-02-09T19:24:05,575 check.warn(importable) 2023-02-09T19:24:05,575 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.Sundials.include' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,575 !! 2023-02-09T19:24:05,576 ############################ 2023-02-09T19:24:05,576 # Package would be ignored # 2023-02-09T19:24:05,577 ############################ 2023-02-09T19:24:05,577 Python recognizes 'gillespy2.solvers.cpp.c_base.Sundials.include' as an importable package, 2023-02-09T19:24:05,577 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,578 'gillespy2.solvers.cpp.c_base.Sundials.include' has been automatically added to the distribution only 2023-02-09T19:24:05,578 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,578 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,579 Please make sure that 'gillespy2.solvers.cpp.c_base.Sundials.include' is included as a package by using 2023-02-09T19:24:05,579 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,580 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,580 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,580 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,581 documentation page. 2023-02-09T19:24:05,582 !! 2023-02-09T19:24:05,582 check.warn(importable) 2023-02-09T19:24:05,583 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.Sundials.src' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,583 !! 2023-02-09T19:24:05,584 ############################ 2023-02-09T19:24:05,584 # Package would be ignored # 2023-02-09T19:24:05,584 ############################ 2023-02-09T19:24:05,585 Python recognizes 'gillespy2.solvers.cpp.c_base.Sundials.src' as an importable package, 2023-02-09T19:24:05,585 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,585 'gillespy2.solvers.cpp.c_base.Sundials.src' has been automatically added to the distribution only 2023-02-09T19:24:05,586 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,586 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,587 Please make sure that 'gillespy2.solvers.cpp.c_base.Sundials.src' is included as a package by using 2023-02-09T19:24:05,587 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,587 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,588 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,588 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,588 documentation page. 2023-02-09T19:24:05,589 !! 2023-02-09T19:24:05,590 check.warn(importable) 2023-02-09T19:24:05,590 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.Tau' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,590 !! 2023-02-09T19:24:05,591 ############################ 2023-02-09T19:24:05,591 # Package would be ignored # 2023-02-09T19:24:05,592 ############################ 2023-02-09T19:24:05,592 Python recognizes 'gillespy2.solvers.cpp.c_base.Tau' as an importable package, 2023-02-09T19:24:05,592 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,593 'gillespy2.solvers.cpp.c_base.Tau' has been automatically added to the distribution only 2023-02-09T19:24:05,593 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,593 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,594 Please make sure that 'gillespy2.solvers.cpp.c_base.Tau' is included as a package by using 2023-02-09T19:24:05,594 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,595 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,595 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,595 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,596 documentation page. 2023-02-09T19:24:05,597 !! 2023-02-09T19:24:05,597 check.warn(importable) 2023-02-09T19:24:05,597 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.ode_cpp_solver' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,598 !! 2023-02-09T19:24:05,598 ############################ 2023-02-09T19:24:05,599 # Package would be ignored # 2023-02-09T19:24:05,599 ############################ 2023-02-09T19:24:05,599 Python recognizes 'gillespy2.solvers.cpp.c_base.ode_cpp_solver' as an importable package, 2023-02-09T19:24:05,600 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,600 'gillespy2.solvers.cpp.c_base.ode_cpp_solver' has been automatically added to the distribution only 2023-02-09T19:24:05,600 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,601 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,601 Please make sure that 'gillespy2.solvers.cpp.c_base.ode_cpp_solver' is included as a package by using 2023-02-09T19:24:05,601 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,602 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,602 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,603 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,603 documentation page. 2023-02-09T19:24:05,604 !! 2023-02-09T19:24:05,604 check.warn(importable) 2023-02-09T19:24:05,605 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.ssa_cpp_solver' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,605 !! 2023-02-09T19:24:05,606 ############################ 2023-02-09T19:24:05,606 # Package would be ignored # 2023-02-09T19:24:05,606 ############################ 2023-02-09T19:24:05,607 Python recognizes 'gillespy2.solvers.cpp.c_base.ssa_cpp_solver' as an importable package, 2023-02-09T19:24:05,607 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,608 'gillespy2.solvers.cpp.c_base.ssa_cpp_solver' has been automatically added to the distribution only 2023-02-09T19:24:05,608 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,608 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,609 Please make sure that 'gillespy2.solvers.cpp.c_base.ssa_cpp_solver' is included as a package by using 2023-02-09T19:24:05,609 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,609 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,610 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,610 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,611 documentation page. 2023-02-09T19:24:05,612 !! 2023-02-09T19:24:05,612 check.warn(importable) 2023-02-09T19:24:05,612 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.tau_hybrid_cpp_solver' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,613 !! 2023-02-09T19:24:05,614 ############################ 2023-02-09T19:24:05,614 # Package would be ignored # 2023-02-09T19:24:05,614 ############################ 2023-02-09T19:24:05,615 Python recognizes 'gillespy2.solvers.cpp.c_base.tau_hybrid_cpp_solver' as an importable package, 2023-02-09T19:24:05,615 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,616 'gillespy2.solvers.cpp.c_base.tau_hybrid_cpp_solver' has been automatically added to the distribution only 2023-02-09T19:24:05,616 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,617 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,617 Please make sure that 'gillespy2.solvers.cpp.c_base.tau_hybrid_cpp_solver' is included as a package by using 2023-02-09T19:24:05,617 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,618 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,618 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,619 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,619 documentation page. 2023-02-09T19:24:05,620 !! 2023-02-09T19:24:05,621 check.warn(importable) 2023-02-09T19:24:05,621 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.tau_leaping_cpp_solver' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,621 !! 2023-02-09T19:24:05,622 ############################ 2023-02-09T19:24:05,622 # Package would be ignored # 2023-02-09T19:24:05,623 ############################ 2023-02-09T19:24:05,623 Python recognizes 'gillespy2.solvers.cpp.c_base.tau_leaping_cpp_solver' as an importable package, 2023-02-09T19:24:05,623 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,624 'gillespy2.solvers.cpp.c_base.tau_leaping_cpp_solver' has been automatically added to the distribution only 2023-02-09T19:24:05,624 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,625 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,625 Please make sure that 'gillespy2.solvers.cpp.c_base.tau_leaping_cpp_solver' is included as a package by using 2023-02-09T19:24:05,626 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,626 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,626 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,627 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,627 documentation page. 2023-02-09T19:24:05,628 !! 2023-02-09T19:24:05,629 check.warn(importable) 2023-02-09T19:24:05,629 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'gillespy2.solvers.cpp.c_base.template' as data is deprecated, please list it in `packages`. 2023-02-09T19:24:05,629 !! 2023-02-09T19:24:05,630 ############################ 2023-02-09T19:24:05,631 # Package would be ignored # 2023-02-09T19:24:05,631 ############################ 2023-02-09T19:24:05,631 Python recognizes 'gillespy2.solvers.cpp.c_base.template' as an importable package, 2023-02-09T19:24:05,631 but it is not listed in the `packages` configuration of setuptools. 2023-02-09T19:24:05,632 'gillespy2.solvers.cpp.c_base.template' has been automatically added to the distribution only 2023-02-09T19:24:05,632 because it may contain data files, but this behavior is likely to change 2023-02-09T19:24:05,633 in future versions of setuptools (and therefore is considered deprecated). 2023-02-09T19:24:05,633 Please make sure that 'gillespy2.solvers.cpp.c_base.template' is included as a package by using 2023-02-09T19:24:05,634 the `packages` configuration field or the proper discovery methods 2023-02-09T19:24:05,634 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-09T19:24:05,634 instead of `find_packages(...)`/`find:`). 2023-02-09T19:24:05,635 You can read more about "package discovery" and "data files" on setuptools 2023-02-09T19:24:05,635 documentation page. 2023-02-09T19:24:05,636 !! 2023-02-09T19:24:05,637 check.warn(importable) 2023-02-09T19:24:05,637 creating build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,637 copying gillespy2/solvers/cpp/c_base/SConscript -> build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,638 copying gillespy2/solvers/cpp/c_base/arg_parser.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,638 copying gillespy2/solvers/cpp/c_base/arg_parser.h -> build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,638 copying gillespy2/solvers/cpp/c_base/model.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,639 copying gillespy2/solvers/cpp/c_base/model.h -> build/lib/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:05,639 creating build/lib/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:05,639 copying gillespy2/solvers/cpp/c_base/Sundials/LICENSE -> build/lib/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:05,640 copying gillespy2/solvers/cpp/c_base/Sundials/NOTICE -> build/lib/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:05,642 copying gillespy2/solvers/cpp/c_base/Sundials/README.md -> build/lib/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:05,646 copying gillespy2/solvers/cpp/c_base/Sundials/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:05,650 creating build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,651 copying gillespy2/solvers/cpp/c_base/Sundials/include/cvode.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,656 copying gillespy2/solvers/cpp/c_base/Sundials/include/cvode_ls.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,661 copying gillespy2/solvers/cpp/c_base/Sundials/include/cvode_proj.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,665 copying gillespy2/solvers/cpp/c_base/Sundials/include/cvode_spils.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,669 copying gillespy2/solvers/cpp/c_base/Sundials/include/nvector_serial.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,674 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_band.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,679 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_config.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,683 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_direct.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,688 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_iterative.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,693 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_linearsolver.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,697 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_math.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,702 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_matrix.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,706 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nonlinearsolver.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,711 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,715 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector_senswrapper.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,731 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_types.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,736 copying gillespy2/solvers/cpp/c_base/Sundials/include/sundials_version.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,739 copying gillespy2/solvers/cpp/c_base/Sundials/include/sunlinsol_spgmr.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,744 copying gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_band.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,748 copying gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_dense.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,752 copying gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_sparse.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,757 copying gillespy2/solvers/cpp/c_base/Sundials/include/sunnonlinsol_newton.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:05,761 creating build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,762 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,774 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_direct.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,778 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_fused_stubs.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,783 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_impl.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,788 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_io.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,794 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,802 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls_impl.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,807 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_nls.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,811 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,816 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj_impl.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,820 copying gillespy2/solvers/cpp/c_base/Sundials/src/cvode_spils.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,824 copying gillespy2/solvers/cpp/c_base/Sundials/src/nvector_serial.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,831 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_band.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,836 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_debug.h -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,839 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_iterative.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,844 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_linearsolver.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,848 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_math.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,852 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_matrix.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,857 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nonlinearsolver.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,861 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,866 copying gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector_senswrapper.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,871 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_band.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,876 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_dense.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,880 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_spgmr.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,886 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_band.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,891 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_dense.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,896 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_fixedpoint.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,902 copying gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_newton.c -> build/lib/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:05,907 creating build/lib/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:05,909 copying gillespy2/solvers/cpp/c_base/Tau/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:05,913 copying gillespy2/solvers/cpp/c_base/Tau/tau.cpp -> build/lib/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:05,918 copying gillespy2/solvers/cpp/c_base/Tau/tau.h -> build/lib/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:05,922 creating build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:05,923 copying gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp -> build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:05,927 copying gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp -> build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:05,932 copying gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h -> build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:05,936 copying gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:05,939 creating build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:05,941 copying gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:05,945 copying gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp -> build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:05,949 copying gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp -> build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:05,953 copying gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h -> build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:05,957 creating build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,958 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,964 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,969 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,972 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,976 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,982 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,985 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,990 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,994 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:05,999 copying gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h -> build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,004 creating build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,005 copying gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript -> build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,009 copying gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,013 copying gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp -> build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,018 copying gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h -> build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,021 creating build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,023 copying gillespy2/solvers/cpp/c_base/template/template.cpp -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,028 copying gillespy2/solvers/cpp/c_base/template/template.h -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,032 copying gillespy2/solvers/cpp/c_base/template/template_defaults.h -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,036 copying gillespy2/solvers/cpp/c_base/template/template_definitions.h -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,040 copying gillespy2/solvers/cpp/c_base/template/template_opts.h -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,044 copying gillespy2/solvers/cpp/c_base/template/template_params.h -> build/lib/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,048 copying gillespy2/solvers/cpp/build/SConstruct -> build/lib/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,159 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-02-09T19:24:06,160 setuptools.SetuptoolsDeprecationWarning, 2023-02-09T19:24:06,253 installing to build/bdist.linux-armv7l/wheel 2023-02-09T19:24:06,254 running install 2023-02-09T19:24:06,318 running install_lib 2023-02-09T19:24:06,414 creating build/bdist.linux-armv7l 2023-02-09T19:24:06,415 creating build/bdist.linux-armv7l/wheel 2023-02-09T19:24:06,418 creating build/bdist.linux-armv7l/wheel/gillespy2 2023-02-09T19:24:06,421 creating build/bdist.linux-armv7l/wheel/gillespy2/sbml 2023-02-09T19:24:06,423 copying build/lib/gillespy2/sbml/SBMLimport.py -> build/bdist.linux-armv7l/wheel/gillespy2/sbml 2023-02-09T19:24:06,428 copying build/lib/gillespy2/sbml/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/sbml 2023-02-09T19:24:06,431 copying build/lib/gillespy2/sbml/SBMLexport.py -> build/bdist.linux-armv7l/wheel/gillespy2/sbml 2023-02-09T19:24:06,437 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers 2023-02-09T19:24:06,440 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2023-02-09T19:24:06,442 copying build/lib/gillespy2/solvers/utilities/solverutils.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2023-02-09T19:24:06,447 copying build/lib/gillespy2/solvers/utilities/Tau.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2023-02-09T19:24:06,451 copying build/lib/gillespy2/solvers/utilities/cpp_support_test.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2023-02-09T19:24:06,455 copying build/lib/gillespy2/solvers/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2023-02-09T19:24:06,460 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,462 copying build/lib/gillespy2/solvers/numpy/tau_hybrid_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,470 copying build/lib/gillespy2/solvers/numpy/ode_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,475 copying build/lib/gillespy2/solvers/numpy/ssa_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,480 copying build/lib/gillespy2/solvers/numpy/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,484 copying build/lib/gillespy2/solvers/numpy/tau_leaping_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,490 copying build/lib/gillespy2/solvers/numpy/CLE_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2023-02-09T19:24:06,497 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2023-02-09T19:24:06,499 copying build/lib/gillespy2/solvers/stochkit/stochkit_solvers.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2023-02-09T19:24:06,505 copying build/lib/gillespy2/solvers/stochkit/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2023-02-09T19:24:06,509 copying build/lib/gillespy2/solvers/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers 2023-02-09T19:24:06,514 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,517 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,519 copying build/lib/gillespy2/solvers/cpp/build/expression.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,525 copying build/lib/gillespy2/solvers/cpp/build/make.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,529 copying build/lib/gillespy2/solvers/cpp/build/build_engine.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,534 copying build/lib/gillespy2/solvers/cpp/build/SConstruct -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,538 copying build/lib/gillespy2/solvers/cpp/build/template_gen.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,544 copying build/lib/gillespy2/solvers/cpp/build/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/build 2023-02-09T19:24:06,549 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,551 copying build/lib/gillespy2/solvers/cpp/c_base/arg_parser.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,556 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,558 copying build/lib/gillespy2/solvers/cpp/c_base/template/template.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,562 copying build/lib/gillespy2/solvers/cpp/c_base/template/template_params.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,568 copying build/lib/gillespy2/solvers/cpp/c_base/template/template_definitions.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,572 copying build/lib/gillespy2/solvers/cpp/c_base/template/template_opts.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,575 copying build/lib/gillespy2/solvers/cpp/c_base/template/template.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,580 copying build/lib/gillespy2/solvers/cpp/c_base/template/template_defaults.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/template 2023-02-09T19:24:06,584 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:06,586 copying build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:06,590 copying build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:06,593 copying build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:06,598 copying build/lib/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ssa_cpp_solver 2023-02-09T19:24:06,602 copying build/lib/gillespy2/solvers/cpp/c_base/arg_parser.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,608 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:06,610 copying build/lib/gillespy2/solvers/cpp/c_base/Tau/tau.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:06,615 copying build/lib/gillespy2/solvers/cpp/c_base/Tau/tau.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:06,619 copying build/lib/gillespy2/solvers/cpp/c_base/Tau/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Tau 2023-02-09T19:24:06,623 copying build/lib/gillespy2/solvers/cpp/c_base/model.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,628 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,630 copying build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,634 copying build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,638 copying build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,642 copying build/lib/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver 2023-02-09T19:24:06,647 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,649 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,653 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,658 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,664 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,669 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,674 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,678 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,683 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,688 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,692 copying build/lib/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver 2023-02-09T19:24:06,697 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:06,699 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/NOTICE -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:06,704 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,707 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_math.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,711 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_io.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,716 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_linearsolver.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,721 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,728 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_fused_stubs.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,733 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_dense.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,737 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,742 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_dense.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,747 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_iterative.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,752 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,763 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_direct.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,766 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_spils.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,770 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector_senswrapper.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,774 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_nls.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,779 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,783 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_newton.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,787 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_spgmr.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,792 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_matrix.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,796 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nonlinearsolver.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,800 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_band.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,804 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_fixedpoint.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,809 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_band.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,813 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/nvector_serial.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,819 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sundials_debug.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,823 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_band.c -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,828 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_impl.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,834 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj_impl.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,838 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls_impl.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/src 2023-02-09T19:24:06,843 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/README.md -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:06,846 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/LICENSE -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:06,852 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,854 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector_senswrapper.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,859 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_version.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,862 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/cvode_spils.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,866 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nonlinearsolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,871 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/nvector_serial.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,876 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sunlinsol_spgmr.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,881 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_linearsolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,885 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_direct.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,890 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_band.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,895 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_math.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,899 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_dense.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,903 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_iterative.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,908 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/cvode.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,912 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,917 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_types.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,921 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/cvode_proj.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,924 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/cvode_ls.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,929 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_matrix.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,932 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_band.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,936 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_sparse.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,940 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sundials_config.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,944 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/include/sunnonlinsol_newton.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials/include 2023-02-09T19:24:06,948 copying build/lib/gillespy2/solvers/cpp/c_base/Sundials/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/Sundials 2023-02-09T19:24:06,951 copying build/lib/gillespy2/solvers/cpp/c_base/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,954 copying build/lib/gillespy2/solvers/cpp/c_base/model.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2023-02-09T19:24:06,959 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:06,960 copying build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:06,964 copying build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:06,967 copying build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:06,970 copying build/lib/gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base/ode_cpp_solver 2023-02-09T19:24:06,973 copying build/lib/gillespy2/solvers/cpp/ode_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,977 copying build/lib/gillespy2/solvers/cpp/ssa_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,981 copying build/lib/gillespy2/solvers/cpp/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,984 copying build/lib/gillespy2/solvers/cpp/tau_hybrid_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,989 copying build/lib/gillespy2/solvers/cpp/c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,994 copying build/lib/gillespy2/solvers/cpp/c_decoder.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:06,998 copying build/lib/gillespy2/solvers/cpp/tau_leaping_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2023-02-09T19:24:07,004 creating build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,006 copying build/lib/gillespy2/core/raterule.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,010 copying build/lib/gillespy2/core/species.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,015 copying build/lib/gillespy2/core/parameter.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,020 copying build/lib/gillespy2/core/jsonify.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,025 copying build/lib/gillespy2/core/model.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,033 copying build/lib/gillespy2/core/assignmentrule.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,037 copying build/lib/gillespy2/core/liveGraphing.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,041 copying build/lib/gillespy2/core/timespan.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,046 copying build/lib/gillespy2/core/reaction.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,052 copying build/lib/gillespy2/core/sortableobject.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,055 copying build/lib/gillespy2/core/events.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,059 copying build/lib/gillespy2/core/gillespyError.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,062 copying build/lib/gillespy2/core/gillespySolver.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,066 copying build/lib/gillespy2/core/cleanup.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,070 copying build/lib/gillespy2/core/functiondefinition.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,073 copying build/lib/gillespy2/core/results.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,079 copying build/lib/gillespy2/core/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2023-02-09T19:24:07,082 copying build/lib/gillespy2/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2 2023-02-09T19:24:07,086 creating build/bdist.linux-armv7l/wheel/gillespy2/stochss 2023-02-09T19:24:07,088 copying build/lib/gillespy2/stochss/StochSSexport.py -> build/bdist.linux-armv7l/wheel/gillespy2/stochss 2023-02-09T19:24:07,092 copying build/lib/gillespy2/stochss/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/stochss 2023-02-09T19:24:07,095 copying build/lib/gillespy2/__version__.py -> build/bdist.linux-armv7l/wheel/gillespy2 2023-02-09T19:24:07,098 running install_egg_info 2023-02-09T19:24:07,191 Copying gillespy2.egg-info to build/bdist.linux-armv7l/wheel/gillespy2-1.8.0-py3.7.egg-info 2023-02-09T19:24:07,211 running install_scripts 2023-02-09T19:24:07,267 adding license file "LICENSE" (matched pattern "LICENSE") 2023-02-09T19:24:07,275 creating build/bdist.linux-armv7l/wheel/gillespy2-1.8.0.dist-info/WHEEL 2023-02-09T19:24:07,280 creating '/tmp/pip-wheel-g3nc3w49/gillespy2-1.8.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-09T19:24:07,285 adding 'gillespy2/__init__.py' 2023-02-09T19:24:07,287 adding 'gillespy2/__version__.py' 2023-02-09T19:24:07,291 adding 'gillespy2/core/__init__.py' 2023-02-09T19:24:07,293 adding 'gillespy2/core/assignmentrule.py' 2023-02-09T19:24:07,296 adding 'gillespy2/core/cleanup.py' 2023-02-09T19:24:07,300 adding 'gillespy2/core/events.py' 2023-02-09T19:24:07,303 adding 'gillespy2/core/functiondefinition.py' 2023-02-09T19:24:07,305 adding 'gillespy2/core/gillespyError.py' 2023-02-09T19:24:07,308 adding 'gillespy2/core/gillespySolver.py' 2023-02-09T19:24:07,313 adding 'gillespy2/core/jsonify.py' 2023-02-09T19:24:07,317 adding 'gillespy2/core/liveGraphing.py' 2023-02-09T19:24:07,337 adding 'gillespy2/core/model.py' 2023-02-09T19:24:07,342 adding 'gillespy2/core/parameter.py' 2023-02-09T19:24:07,344 adding 'gillespy2/core/raterule.py' 2023-02-09T19:24:07,352 adding 'gillespy2/core/reaction.py' 2023-02-09T19:24:07,360 adding 'gillespy2/core/results.py' 2023-02-09T19:24:07,363 adding 'gillespy2/core/sortableobject.py' 2023-02-09T19:24:07,367 adding 'gillespy2/core/species.py' 2023-02-09T19:24:07,370 adding 'gillespy2/core/timespan.py' 2023-02-09T19:24:07,374 adding 'gillespy2/sbml/SBMLexport.py' 2023-02-09T19:24:07,380 adding 'gillespy2/sbml/SBMLimport.py' 2023-02-09T19:24:07,382 adding 'gillespy2/sbml/__init__.py' 2023-02-09T19:24:07,386 adding 'gillespy2/solvers/__init__.py' 2023-02-09T19:24:07,390 adding 'gillespy2/solvers/cpp/__init__.py' 2023-02-09T19:24:07,393 adding 'gillespy2/solvers/cpp/c_decoder.py' 2023-02-09T19:24:07,399 adding 'gillespy2/solvers/cpp/c_solver.py' 2023-02-09T19:24:07,403 adding 'gillespy2/solvers/cpp/ode_c_solver.py' 2023-02-09T19:24:07,406 adding 'gillespy2/solvers/cpp/ssa_c_solver.py' 2023-02-09T19:24:07,411 adding 'gillespy2/solvers/cpp/tau_hybrid_c_solver.py' 2023-02-09T19:24:07,414 adding 'gillespy2/solvers/cpp/tau_leaping_c_solver.py' 2023-02-09T19:24:07,419 adding 'gillespy2/solvers/cpp/build/SConstruct' 2023-02-09T19:24:07,421 adding 'gillespy2/solvers/cpp/build/__init__.py' 2023-02-09T19:24:07,424 adding 'gillespy2/solvers/cpp/build/build_engine.py' 2023-02-09T19:24:07,429 adding 'gillespy2/solvers/cpp/build/expression.py' 2023-02-09T19:24:07,433 adding 'gillespy2/solvers/cpp/build/make.py' 2023-02-09T19:24:07,438 adding 'gillespy2/solvers/cpp/build/template_gen.py' 2023-02-09T19:24:07,442 adding 'gillespy2/solvers/cpp/c_base/SConscript' 2023-02-09T19:24:07,445 adding 'gillespy2/solvers/cpp/c_base/arg_parser.cpp' 2023-02-09T19:24:07,448 adding 'gillespy2/solvers/cpp/c_base/arg_parser.h' 2023-02-09T19:24:07,451 adding 'gillespy2/solvers/cpp/c_base/model.cpp' 2023-02-09T19:24:07,455 adding 'gillespy2/solvers/cpp/c_base/model.h' 2023-02-09T19:24:07,459 adding 'gillespy2/solvers/cpp/c_base/Sundials/LICENSE' 2023-02-09T19:24:07,461 adding 'gillespy2/solvers/cpp/c_base/Sundials/NOTICE' 2023-02-09T19:24:07,464 adding 'gillespy2/solvers/cpp/c_base/Sundials/README.md' 2023-02-09T19:24:07,466 adding 'gillespy2/solvers/cpp/c_base/Sundials/SConscript' 2023-02-09T19:24:07,471 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/cvode.h' 2023-02-09T19:24:07,474 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/cvode_ls.h' 2023-02-09T19:24:07,477 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/cvode_proj.h' 2023-02-09T19:24:07,480 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/cvode_spils.h' 2023-02-09T19:24:07,483 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/nvector_serial.h' 2023-02-09T19:24:07,487 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_band.h' 2023-02-09T19:24:07,490 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_config.h' 2023-02-09T19:24:07,494 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_direct.h' 2023-02-09T19:24:07,499 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_iterative.h' 2023-02-09T19:24:07,502 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_linearsolver.h' 2023-02-09T19:24:07,505 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_math.h' 2023-02-09T19:24:07,508 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_matrix.h' 2023-02-09T19:24:07,512 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nonlinearsolver.h' 2023-02-09T19:24:07,516 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector.h' 2023-02-09T19:24:07,519 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_nvector_senswrapper.h' 2023-02-09T19:24:07,522 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_types.h' 2023-02-09T19:24:07,524 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sundials_version.h' 2023-02-09T19:24:07,527 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sunlinsol_spgmr.h' 2023-02-09T19:24:07,530 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_band.h' 2023-02-09T19:24:07,533 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_dense.h' 2023-02-09T19:24:07,536 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sunmatrix_sparse.h' 2023-02-09T19:24:07,539 adding 'gillespy2/solvers/cpp/c_base/Sundials/include/sunnonlinsol_newton.h' 2023-02-09T19:24:07,581 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode.c' 2023-02-09T19:24:07,586 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_direct.c' 2023-02-09T19:24:07,589 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_fused_stubs.c' 2023-02-09T19:24:07,597 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_impl.h' 2023-02-09T19:24:07,604 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_io.c' 2023-02-09T19:24:07,619 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls.c' 2023-02-09T19:24:07,624 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_ls_impl.h' 2023-02-09T19:24:07,628 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_nls.c' 2023-02-09T19:24:07,632 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj.c' 2023-02-09T19:24:07,635 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_proj_impl.h' 2023-02-09T19:24:07,637 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/cvode_spils.c' 2023-02-09T19:24:07,647 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/nvector_serial.c' 2023-02-09T19:24:07,651 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_band.c' 2023-02-09T19:24:07,653 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_debug.h' 2023-02-09T19:24:07,657 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_iterative.c' 2023-02-09T19:24:07,660 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_linearsolver.c' 2023-02-09T19:24:07,662 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_math.c' 2023-02-09T19:24:07,665 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_matrix.c' 2023-02-09T19:24:07,668 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nonlinearsolver.c' 2023-02-09T19:24:07,673 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector.c' 2023-02-09T19:24:07,677 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sundials_nvector_senswrapper.c' 2023-02-09T19:24:07,681 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_band.c' 2023-02-09T19:24:07,684 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_dense.c' 2023-02-09T19:24:07,691 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunlinsol_spgmr.c' 2023-02-09T19:24:07,695 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_band.c' 2023-02-09T19:24:07,699 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunmatrix_dense.c' 2023-02-09T19:24:07,705 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_fixedpoint.c' 2023-02-09T19:24:07,710 adding 'gillespy2/solvers/cpp/c_base/Sundials/src/sunnonlinsol_newton.c' 2023-02-09T19:24:07,714 adding 'gillespy2/solvers/cpp/c_base/Tau/SConscript' 2023-02-09T19:24:07,717 adding 'gillespy2/solvers/cpp/c_base/Tau/tau.cpp' 2023-02-09T19:24:07,720 adding 'gillespy2/solvers/cpp/c_base/Tau/tau.h' 2023-02-09T19:24:07,724 adding 'gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp' 2023-02-09T19:24:07,727 adding 'gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp' 2023-02-09T19:24:07,730 adding 'gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h' 2023-02-09T19:24:07,732 adding 'gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript' 2023-02-09T19:24:07,735 adding 'gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript' 2023-02-09T19:24:07,738 adding 'gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp' 2023-02-09T19:24:07,741 adding 'gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp' 2023-02-09T19:24:07,743 adding 'gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h' 2023-02-09T19:24:07,750 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp' 2023-02-09T19:24:07,755 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h' 2023-02-09T19:24:07,757 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript' 2023-02-09T19:24:07,760 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp' 2023-02-09T19:24:07,766 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp' 2023-02-09T19:24:07,769 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h' 2023-02-09T19:24:07,772 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp' 2023-02-09T19:24:07,774 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h' 2023-02-09T19:24:07,779 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp' 2023-02-09T19:24:07,782 adding 'gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h' 2023-02-09T19:24:07,786 adding 'gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript' 2023-02-09T19:24:07,789 adding 'gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp' 2023-02-09T19:24:07,792 adding 'gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp' 2023-02-09T19:24:07,794 adding 'gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h' 2023-02-09T19:24:07,798 adding 'gillespy2/solvers/cpp/c_base/template/template.cpp' 2023-02-09T19:24:07,801 adding 'gillespy2/solvers/cpp/c_base/template/template.h' 2023-02-09T19:24:07,804 adding 'gillespy2/solvers/cpp/c_base/template/template_defaults.h' 2023-02-09T19:24:07,807 adding 'gillespy2/solvers/cpp/c_base/template/template_definitions.h' 2023-02-09T19:24:07,809 adding 'gillespy2/solvers/cpp/c_base/template/template_opts.h' 2023-02-09T19:24:07,811 adding 'gillespy2/solvers/cpp/c_base/template/template_params.h' 2023-02-09T19:24:07,818 adding 'gillespy2/solvers/numpy/CLE_solver.py' 2023-02-09T19:24:07,821 adding 'gillespy2/solvers/numpy/__init__.py' 2023-02-09T19:24:07,826 adding 'gillespy2/solvers/numpy/ode_solver.py' 2023-02-09T19:24:07,831 adding 'gillespy2/solvers/numpy/ssa_solver.py' 2023-02-09T19:24:07,848 adding 'gillespy2/solvers/numpy/tau_hybrid_solver.py' 2023-02-09T19:24:07,855 adding 'gillespy2/solvers/numpy/tau_leaping_solver.py' 2023-02-09T19:24:07,859 adding 'gillespy2/solvers/stochkit/__init__.py' 2023-02-09T19:24:07,864 adding 'gillespy2/solvers/stochkit/stochkit_solvers.py' 2023-02-09T19:24:07,868 adding 'gillespy2/solvers/utilities/Tau.py' 2023-02-09T19:24:07,871 adding 'gillespy2/solvers/utilities/__init__.py' 2023-02-09T19:24:07,873 adding 'gillespy2/solvers/utilities/cpp_support_test.py' 2023-02-09T19:24:07,876 adding 'gillespy2/solvers/utilities/solverutils.py' 2023-02-09T19:24:07,881 adding 'gillespy2/stochss/StochSSexport.py' 2023-02-09T19:24:07,883 adding 'gillespy2/stochss/__init__.py' 2023-02-09T19:24:07,899 adding 'gillespy2-1.8.0.dist-info/LICENSE' 2023-02-09T19:24:07,905 adding 'gillespy2-1.8.0.dist-info/METADATA' 2023-02-09T19:24:07,907 adding 'gillespy2-1.8.0.dist-info/WHEEL' 2023-02-09T19:24:07,908 adding 'gillespy2-1.8.0.dist-info/top_level.txt' 2023-02-09T19:24:07,915 adding 'gillespy2-1.8.0.dist-info/RECORD' 2023-02-09T19:24:07,935 removing build/bdist.linux-armv7l/wheel 2023-02-09T19:24:08,258 Building wheel for gillespy2 (setup.py): finished with status 'done' 2023-02-09T19:24:08,276 Created wheel for gillespy2: filename=gillespy2-1.8.0-py3-none-any.whl size=400768 sha256=bd74c94005a58961c3d8dbb073fa94ba6aafeb6887443f08ec7f76c875503015 2023-02-09T19:24:08,278 Stored in directory: /tmp/pip-ephem-wheel-cache-uoeefi0m/wheels/ee/42/55/216ce8d8399862c4645cd750c8e02df34495d44b134d4f130f 2023-02-09T19:24:08,320 Successfully built gillespy2 2023-02-09T19:24:08,357 Removed build tracker: '/tmp/pip-build-tracker-09y0a4wg'