2023-02-20T10:57:08,777 Created temporary directory: /tmp/pip-ephem-wheel-cache-gg6fa86i 2023-02-20T10:57:08,779 Created temporary directory: /tmp/pip-build-tracker-mucu8nao 2023-02-20T10:57:08,780 Initialized build tracking at /tmp/pip-build-tracker-mucu8nao 2023-02-20T10:57:08,780 Created build tracker: /tmp/pip-build-tracker-mucu8nao 2023-02-20T10:57:08,780 Entered build tracker: /tmp/pip-build-tracker-mucu8nao 2023-02-20T10:57:08,781 Created temporary directory: /tmp/pip-wheel-6dzbfw8z 2023-02-20T10:57:08,784 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-20T10:57:08,786 Created temporary directory: /tmp/pip-ephem-wheel-cache-sm5zr1vx 2023-02-20T10:57:08,809 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-20T10:57:08,813 2 location(s) to search for versions of ukat: 2023-02-20T10:57:08,813 * https://pypi.org/simple/ukat/ 2023-02-20T10:57:08,813 * https://www.piwheels.org/simple/ukat/ 2023-02-20T10:57:08,813 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2023-02-20T10:57:08,814 Getting page https://pypi.org/simple/ukat/ 2023-02-20T10:57:08,815 Found index url https://pypi.org/simple 2023-02-20T10:57:08,866 Fetched page https://pypi.org/simple/ukat/ as application/vnd.pypi.simple.v1+json 2023-02-20T10:57:08,870 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:08,871 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2023-02-20T10:57:08,872 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:08,872 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2023-02-20T10:57:08,873 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:08,873 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2023-02-20T10:57:08,874 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:08,874 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2023-02-20T10:57:08,874 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:08,875 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2023-02-20T10:57:08,875 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-02-20T10:57:08,876 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2023-02-20T10:57:08,876 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-02-20T10:57:08,877 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2023-02-20T10:57:08,877 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:08,878 Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1 2023-02-20T10:57:08,878 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/be/62/a915276e1511bc65a0dc4180ef170962967e6f972c58a57a64e3ad0474e0/ukat-0.6.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:08,879 Found link https://files.pythonhosted.org/packages/ff/2a/19315dfeeebb202d6761e86e70a87752435eefd0b5d642b690629b64f704/ukat-0.6.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.2 2023-02-20T10:57:08,879 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/9c/71/e782f90624fa37a2d6c14a03f8fa69bac8e724c7b0e34b547a4969bc98fb/ukat-0.6.3-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:08,879 Found link https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.3 2023-02-20T10:57:08,880 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/32/1a/f0534c14ceec33bfd8193b3f6b012db9c342757766e8890adf1970f2fd1b/ukat-0.6.4-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:08,880 Found link https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.4 2023-02-20T10:57:08,881 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/f0/e2/dadfa3620b6febf2c497470fbe27c6347bea3a28df3304040f6909750c07/ukat-0.6.5-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:08,881 Found link https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.5 2023-02-20T10:57:08,882 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2023-02-20T10:57:08,882 Getting page https://www.piwheels.org/simple/ukat/ 2023-02-20T10:57:08,883 Found index url https://www.piwheels.org/simple 2023-02-20T10:57:09,047 Fetched page https://www.piwheels.org/simple/ukat/ as text/html 2023-02-20T10:57:09,051 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.4-py3-none-any.whl#sha256=5009f9a41fa9e635b2b381e49387fbc0ebee0d9222ac9cb78f9e6ebeff8fc226 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:09,051 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.3-py3-none-any.whl#sha256=5ddc013291e2d74f3f64a22c888c300cdabbc893b6cf514d4c7bf97df8be14a6 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:09,051 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.2-py3-none-any.whl#sha256=a831cd11993de2b4c1c722e0294a13bb3e6d1da09b5ebe3c300307759d10cf02 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:09,051 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.1-py3-none-any.whl#sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-02-20T10:57:09,052 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-02-20T10:57:09,052 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-02-20T10:57:09,052 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:09,052 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:09,052 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:09,053 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:09,053 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-02-20T10:57:09,053 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2023-02-20T10:57:09,053 Skipping link: not a file: https://pypi.org/simple/ukat/ 2023-02-20T10:57:09,073 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2023-02-20T10:57:09,089 Collecting ukat==0.6.5 2023-02-20T10:57:09,092 Created temporary directory: /tmp/pip-unpack-ccpk_kkd 2023-02-20T10:57:09,283 Downloading ukat-0.6.5.tar.gz (71 kB) 2023-02-20T10:57:09,455 Added ukat==0.6.5 from https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz to build tracker '/tmp/pip-build-tracker-mucu8nao' 2023-02-20T10:57:09,457 Running setup.py (path:/tmp/pip-wheel-6dzbfw8z/ukat_f61544eca3f84916b3ce48c60ff99c42/setup.py) egg_info for package ukat 2023-02-20T10:57:09,457 Created temporary directory: /tmp/pip-pip-egg-info-yj_ykw51 2023-02-20T10:57:09,458 Preparing metadata (setup.py): started 2023-02-20T10:57:09,458 Running command python setup.py egg_info 2023-02-20T10:57:10,558 running egg_info 2023-02-20T10:57:10,560 creating /tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info 2023-02-20T10:57:10,583 writing /tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/PKG-INFO 2023-02-20T10:57:10,585 writing dependency_links to /tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/dependency_links.txt 2023-02-20T10:57:10,587 writing requirements to /tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/requires.txt 2023-02-20T10:57:10,588 writing top-level names to /tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/top_level.txt 2023-02-20T10:57:10,590 writing manifest file '/tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/SOURCES.txt' 2023-02-20T10:57:10,671 reading manifest file '/tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/SOURCES.txt' 2023-02-20T10:57:10,672 reading manifest template 'MANIFEST.in' 2023-02-20T10:57:10,686 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-20T10:57:10,686 no previously-included directories found matching 'doc' 2023-02-20T10:57:10,687 no previously-included directories found matching 'experiments' 2023-02-20T10:57:10,687 adding license file 'LICENSE' 2023-02-20T10:57:10,690 writing manifest file '/tmp/pip-pip-egg-info-yj_ykw51/ukat.egg-info/SOURCES.txt' 2023-02-20T10:57:10,805 Preparing metadata (setup.py): finished with status 'done' 2023-02-20T10:57:10,811 Source in /tmp/pip-wheel-6dzbfw8z/ukat_f61544eca3f84916b3ce48c60ff99c42 has version 0.6.5, which satisfies requirement ukat==0.6.5 from https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz 2023-02-20T10:57:10,812 Removed ukat==0.6.5 from https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz from build tracker '/tmp/pip-build-tracker-mucu8nao' 2023-02-20T10:57:10,820 Created temporary directory: /tmp/pip-unpack-aycmbvn4 2023-02-20T10:57:10,821 Building wheels for collected packages: ukat 2023-02-20T10:57:10,826 Created temporary directory: /tmp/pip-wheel-jwgk5h7m 2023-02-20T10:57:10,827 Building wheel for ukat (setup.py): started 2023-02-20T10:57:10,828 Destination directory: /tmp/pip-wheel-jwgk5h7m 2023-02-20T10:57:10,828 Running command python setup.py bdist_wheel 2023-02-20T10:57:11,940 running bdist_wheel 2023-02-20T10:57:12,220 running build 2023-02-20T10:57:12,221 running build_py 2023-02-20T10:57:12,247 creating build 2023-02-20T10:57:12,248 creating build/lib 2023-02-20T10:57:12,248 creating build/lib/ukat 2023-02-20T10:57:12,249 copying ukat/__init__.py -> build/lib/ukat 2023-02-20T10:57:12,252 creating build/lib/ukat/segmentation 2023-02-20T10:57:12,253 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2023-02-20T10:57:12,255 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2023-02-20T10:57:12,258 creating build/lib/ukat/qa 2023-02-20T10:57:12,259 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2023-02-20T10:57:12,261 copying ukat/qa/snr.py -> build/lib/ukat/qa 2023-02-20T10:57:12,264 creating build/lib/ukat/vessels 2023-02-20T10:57:12,265 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2023-02-20T10:57:12,266 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2023-02-20T10:57:12,269 creating build/lib/ukat/utils 2023-02-20T10:57:12,270 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2023-02-20T10:57:12,272 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2023-02-20T10:57:12,274 copying ukat/utils/ge.py -> build/lib/ukat/utils 2023-02-20T10:57:12,276 copying ukat/utils/tools.py -> build/lib/ukat/utils 2023-02-20T10:57:12,278 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2023-02-20T10:57:12,282 creating build/lib/ukat/data 2023-02-20T10:57:12,282 copying ukat/data/__init__.py -> build/lib/ukat/data 2023-02-20T10:57:12,284 copying ukat/data/fetch.py -> build/lib/ukat/data 2023-02-20T10:57:12,288 creating build/lib/ukat/mapping 2023-02-20T10:57:12,289 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,291 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,294 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,296 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,298 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,301 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,304 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2023-02-20T10:57:12,307 creating build/lib/ukat/segmentation/tests 2023-02-20T10:57:12,308 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2023-02-20T10:57:12,310 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2023-02-20T10:57:12,313 creating build/lib/ukat/qa/tests 2023-02-20T10:57:12,313 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2023-02-20T10:57:12,315 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2023-02-20T10:57:12,318 creating build/lib/ukat/vessels/tests 2023-02-20T10:57:12,319 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2023-02-20T10:57:12,321 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2023-02-20T10:57:12,324 creating build/lib/ukat/utils/tests 2023-02-20T10:57:12,325 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2023-02-20T10:57:12,326 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2023-02-20T10:57:12,328 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2023-02-20T10:57:12,331 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2023-02-20T10:57:12,333 copying ukat/utils/tests/test_ge.py -> build/lib/ukat/utils/tests 2023-02-20T10:57:12,335 creating build/lib/ukat/data/tests 2023-02-20T10:57:12,336 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2023-02-20T10:57:12,338 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2023-02-20T10:57:12,341 creating build/lib/ukat/mapping/tests 2023-02-20T10:57:12,342 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,344 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,346 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,349 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,351 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,354 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,356 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2023-02-20T10:57:12,358 running egg_info 2023-02-20T10:57:12,415 writing ukat.egg-info/PKG-INFO 2023-02-20T10:57:12,418 writing dependency_links to ukat.egg-info/dependency_links.txt 2023-02-20T10:57:12,420 writing requirements to ukat.egg-info/requires.txt 2023-02-20T10:57:12,421 writing top-level names to ukat.egg-info/top_level.txt 2023-02-20T10:57:12,454 reading manifest file 'ukat.egg-info/SOURCES.txt' 2023-02-20T10:57:12,457 reading manifest template 'MANIFEST.in' 2023-02-20T10:57:12,481 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-20T10:57:12,482 no previously-included directories found matching 'doc' 2023-02-20T10:57:12,482 no previously-included directories found matching 'experiments' 2023-02-20T10:57:12,483 adding license file 'LICENSE' 2023-02-20T10:57:12,486 writing manifest file 'ukat.egg-info/SOURCES.txt' 2023-02-20T10:57:12,489 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ukat.utils.tests.test_data' as data is deprecated, please list it in `packages`. 2023-02-20T10:57:12,490 !! 2023-02-20T10:57:12,490 ############################ 2023-02-20T10:57:12,490 # Package would be ignored # 2023-02-20T10:57:12,490 ############################ 2023-02-20T10:57:12,490 Python recognizes 'ukat.utils.tests.test_data' as an importable package, 2023-02-20T10:57:12,490 but it is not listed in the `packages` configuration of setuptools. 2023-02-20T10:57:12,491 'ukat.utils.tests.test_data' has been automatically added to the distribution only 2023-02-20T10:57:12,491 because it may contain data files, but this behavior is likely to change 2023-02-20T10:57:12,491 in future versions of setuptools (and therefore is considered deprecated). 2023-02-20T10:57:12,491 Please make sure that 'ukat.utils.tests.test_data' is included as a package by using 2023-02-20T10:57:12,491 the `packages` configuration field or the proper discovery methods 2023-02-20T10:57:12,492 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-20T10:57:12,492 instead of `find_packages(...)`/`find:`). 2023-02-20T10:57:12,492 You can read more about "package discovery" and "data files" on setuptools 2023-02-20T10:57:12,492 documentation page. 2023-02-20T10:57:12,492 !! 2023-02-20T10:57:12,493 check.warn(importable) 2023-02-20T10:57:12,493 creating build/lib/ukat/utils/tests/test_data 2023-02-20T10:57:12,493 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2023-02-20T10:57:12,495 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2023-02-20T10:57:12,497 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2023-02-20T10:57:12,533 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-02-20T10:57:12,533 warnings.warn( 2023-02-20T10:57:12,557 installing to build/bdist.linux-armv7l/wheel 2023-02-20T10:57:12,557 running install 2023-02-20T10:57:12,582 running install_lib 2023-02-20T10:57:12,610 creating build/bdist.linux-armv7l 2023-02-20T10:57:12,611 creating build/bdist.linux-armv7l/wheel 2023-02-20T10:57:12,613 creating build/bdist.linux-armv7l/wheel/ukat 2023-02-20T10:57:12,615 copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat 2023-02-20T10:57:12,617 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-02-20T10:57:12,618 copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-02-20T10:57:12,621 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-02-20T10:57:12,622 copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-02-20T10:57:12,624 copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-02-20T10:57:12,627 copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-02-20T10:57:12,630 creating build/bdist.linux-armv7l/wheel/ukat/qa 2023-02-20T10:57:12,631 copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2023-02-20T10:57:12,634 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-02-20T10:57:12,635 copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-02-20T10:57:12,637 copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-02-20T10:57:12,640 copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2023-02-20T10:57:12,643 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2023-02-20T10:57:12,644 copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2023-02-20T10:57:12,646 copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2023-02-20T10:57:12,649 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-02-20T10:57:12,650 copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-02-20T10:57:12,652 copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-02-20T10:57:12,655 creating build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,656 copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,658 copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,660 copying build/lib/ukat/utils/ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,662 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,663 copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,665 copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,667 copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,670 copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,673 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-02-20T10:57:12,673 copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-02-20T10:57:12,675 copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-02-20T10:57:12,677 copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-02-20T10:57:12,679 copying build/lib/ukat/utils/tests/test_ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-02-20T10:57:12,681 copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,684 copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-02-20T10:57:12,687 creating build/bdist.linux-armv7l/wheel/ukat/data 2023-02-20T10:57:12,688 copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data 2023-02-20T10:57:12,691 copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data 2023-02-20T10:57:12,698 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-02-20T10:57:12,699 copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-02-20T10:57:12,702 copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-02-20T10:57:12,705 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,706 copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,709 copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,712 copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,714 copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,717 copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,720 copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,723 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,724 copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,726 copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,729 copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,732 copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,735 copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,738 copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,741 copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-02-20T10:57:12,744 copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-02-20T10:57:12,746 running install_egg_info 2023-02-20T10:57:12,776 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.6.5-py3.9.egg-info 2023-02-20T10:57:12,791 running install_scripts 2023-02-20T10:57:12,880 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-02-20T10:57:12,886 creating build/bdist.linux-armv7l/wheel/ukat-0.6.5.dist-info/WHEEL 2023-02-20T10:57:12,889 creating '/tmp/pip-wheel-jwgk5h7m/ukat-0.6.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-20T10:57:12,892 adding 'ukat/__init__.py' 2023-02-20T10:57:12,894 adding 'ukat/data/__init__.py' 2023-02-20T10:57:12,898 adding 'ukat/data/fetch.py' 2023-02-20T10:57:12,900 adding 'ukat/data/tests/__init__.py' 2023-02-20T10:57:12,902 adding 'ukat/data/tests/test_fetch.py' 2023-02-20T10:57:12,904 adding 'ukat/mapping/__init__.py' 2023-02-20T10:57:12,906 adding 'ukat/mapping/b0.py' 2023-02-20T10:57:12,908 adding 'ukat/mapping/diffusion.py' 2023-02-20T10:57:12,909 adding 'ukat/mapping/mtr.py' 2023-02-20T10:57:12,912 adding 'ukat/mapping/t1.py' 2023-02-20T10:57:12,914 adding 'ukat/mapping/t2.py' 2023-02-20T10:57:12,916 adding 'ukat/mapping/t2star.py' 2023-02-20T10:57:12,919 adding 'ukat/mapping/tests/__init__.py' 2023-02-20T10:57:12,921 adding 'ukat/mapping/tests/test_b0.py' 2023-02-20T10:57:12,923 adding 'ukat/mapping/tests/test_diffusion.py' 2023-02-20T10:57:12,924 adding 'ukat/mapping/tests/test_mtr.py' 2023-02-20T10:57:12,927 adding 'ukat/mapping/tests/test_t1.py' 2023-02-20T10:57:12,929 adding 'ukat/mapping/tests/test_t2.py' 2023-02-20T10:57:12,930 adding 'ukat/mapping/tests/test_t2star.py' 2023-02-20T10:57:12,933 adding 'ukat/qa/__init__.py' 2023-02-20T10:57:12,934 adding 'ukat/qa/snr.py' 2023-02-20T10:57:12,936 adding 'ukat/qa/tests/__init__.py' 2023-02-20T10:57:12,938 adding 'ukat/qa/tests/test_snr.py' 2023-02-20T10:57:12,940 adding 'ukat/segmentation/__init__.py' 2023-02-20T10:57:12,941 adding 'ukat/segmentation/whole_kidney.py' 2023-02-20T10:57:12,943 adding 'ukat/segmentation/tests/__init__.py' 2023-02-20T10:57:12,945 adding 'ukat/segmentation/tests/test_whole_kidney.py' 2023-02-20T10:57:12,947 adding 'ukat/utils/__init__.py' 2023-02-20T10:57:12,949 adding 'ukat/utils/arraystats.py' 2023-02-20T10:57:12,950 adding 'ukat/utils/ge.py' 2023-02-20T10:57:12,951 adding 'ukat/utils/siemens.py' 2023-02-20T10:57:12,953 adding 'ukat/utils/tools.py' 2023-02-20T10:57:12,955 adding 'ukat/utils/tests/__init__.py' 2023-02-20T10:57:12,957 adding 'ukat/utils/tests/test_arraystats.py' 2023-02-20T10:57:12,958 adding 'ukat/utils/tests/test_ge.py' 2023-02-20T10:57:12,960 adding 'ukat/utils/tests/test_siemens.py' 2023-02-20T10:57:12,961 adding 'ukat/utils/tests/test_tools.py' 2023-02-20T10:57:12,964 adding 'ukat/utils/tests/test_data/diffusion_scheme.txt' 2023-02-20T10:57:12,965 adding 'ukat/utils/tests/test_data/expected_from_str.dvs' 2023-02-20T10:57:12,966 adding 'ukat/utils/tests/test_data/expected_from_txt.dvs' 2023-02-20T10:57:12,968 adding 'ukat/vessels/__init__.py' 2023-02-20T10:57:12,970 adding 'ukat/vessels/phase_contrast.py' 2023-02-20T10:57:12,972 adding 'ukat/vessels/tests/__init__.py' 2023-02-20T10:57:12,974 adding 'ukat/vessels/tests/test_phase_contrast.py' 2023-02-20T10:57:12,981 adding 'ukat-0.6.5.dist-info/LICENSE' 2023-02-20T10:57:12,983 adding 'ukat-0.6.5.dist-info/METADATA' 2023-02-20T10:57:12,984 adding 'ukat-0.6.5.dist-info/WHEEL' 2023-02-20T10:57:12,985 adding 'ukat-0.6.5.dist-info/top_level.txt' 2023-02-20T10:57:12,986 adding 'ukat-0.6.5.dist-info/RECORD' 2023-02-20T10:57:12,990 removing build/bdist.linux-armv7l/wheel 2023-02-20T10:57:13,156 Building wheel for ukat (setup.py): finished with status 'done' 2023-02-20T10:57:13,160 Created wheel for ukat: filename=ukat-0.6.5-py3-none-any.whl size=89235 sha256=686daac8761ca477949cfeb3ac3c31c36a3aab6fe277893c09dccdfe04d25f0f 2023-02-20T10:57:13,161 Stored in directory: /tmp/pip-ephem-wheel-cache-sm5zr1vx/wheels/33/80/f5/f2f65a8cdd654aeadda15c198a8abd976992fcbb533631db61 2023-02-20T10:57:13,177 Successfully built ukat 2023-02-20T10:57:13,184 Removed build tracker: '/tmp/pip-build-tracker-mucu8nao'