2023-02-20T14:54:08,096 Created temporary directory: /tmp/pip-ephem-wheel-cache-llrsd9km 2023-02-20T14:54:08,100 Created temporary directory: /tmp/pip-build-tracker-odqso65t 2023-02-20T14:54:08,101 Initialized build tracking at /tmp/pip-build-tracker-odqso65t 2023-02-20T14:54:08,101 Created build tracker: /tmp/pip-build-tracker-odqso65t 2023-02-20T14:54:08,102 Entered build tracker: /tmp/pip-build-tracker-odqso65t 2023-02-20T14:54:08,103 Created temporary directory: /tmp/pip-wheel-c21ob9fh 2023-02-20T14:54:08,111 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-20T14:54:08,116 Created temporary directory: /tmp/pip-ephem-wheel-cache-uu6yufee 2023-02-20T14:54:08,171 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-20T14:54:08,178 2 location(s) to search for versions of ingenannot: 2023-02-20T14:54:08,178 * https://pypi.org/simple/ingenannot/ 2023-02-20T14:54:08,178 * https://www.piwheels.org/simple/ingenannot/ 2023-02-20T14:54:08,179 Fetching project page and analyzing links: https://pypi.org/simple/ingenannot/ 2023-02-20T14:54:08,180 Getting page https://pypi.org/simple/ingenannot/ 2023-02-20T14:54:08,183 Found index url https://pypi.org/simple 2023-02-20T14:54:08,404 Fetched page https://pypi.org/simple/ingenannot/ as application/vnd.pypi.simple.v1+json 2023-02-20T14:54:08,412 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/e5/5a/a63723108529ebf74f973a9b88c544dc1b2f5ba185f6a2c36960b2247c3c/ingenannot-0.0-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,412 Found link https://files.pythonhosted.org/packages/6c/f0/23e4b467f41f86c6b579bfda21c20bd48070821bae4482870894065d28e6/ingenannot-0.0.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0 2023-02-20T14:54:08,413 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/eb/c6/38e555c4aaec4eb3b20d5c5f16920f7bcaa8440cfc045bc9f78adfc20813/ingenannot-0.0.3-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,414 Found link https://files.pythonhosted.org/packages/9d/3d/0932d95ca9e2fdfd1c48b35e7c0f1f44440d13004c6eb14a6db65bf9ce74/ingenannot-0.0.3.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.3 2023-02-20T14:54:08,414 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/18/94/b7c407407ca97bb20891e1ff05138c0fe849a125521616412499bc56d494/ingenannot-0.0.4-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,415 Found link https://files.pythonhosted.org/packages/b9/fe/ff67846ef01a8a3972c2e6ff90f2846108d578a8115e4889aadd24e1b64d/ingenannot-0.0.4.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.4 2023-02-20T14:54:08,416 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/77/2b/44c2fa6e5007c01fb78b6912b7f2cd713f2ae04e061fc933a7769b73300f/ingenannot-0.0.5-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,416 Found link https://files.pythonhosted.org/packages/86/59/a3523a25ba366cb0be9b7fe9bc8423e558a4ee41284a4635b115fc9ec2a5/ingenannot-0.0.5.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.5 2023-02-20T14:54:08,417 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/c7/11/15885ad788684f0d98127a0d4ad61da80e90073c647233303a814c112794/ingenannot-0.0.6-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,417 Found link https://files.pythonhosted.org/packages/a1/c4/ae82b2e7c7779ec4661e02602bdca835ba1051ed54e73a84b8b9b3fbfc13/ingenannot-0.0.6.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.6 2023-02-20T14:54:08,418 Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/77/b1/69f37b940c2346824f6ab22650d8ed9496bf962b6859375c80b8cc0619a3/ingenannot-0.0.7-py3-none-any.whl (from https://pypi.org/simple/ingenannot/) 2023-02-20T14:54:08,419 Found link https://files.pythonhosted.org/packages/10/14/15d8f6266b646779dcc1aaf2c68f38233594e11bf827d7ad7308f33b43b4/ingenannot-0.0.7.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.7 2023-02-20T14:54:08,419 Fetching project page and analyzing links: https://www.piwheels.org/simple/ingenannot/ 2023-02-20T14:54:08,420 Getting page https://www.piwheels.org/simple/ingenannot/ 2023-02-20T14:54:08,422 Found index url https://www.piwheels.org/simple 2023-02-20T14:54:08,671 Fetched page https://www.piwheels.org/simple/ingenannot/ as text/html 2023-02-20T14:54:08,676 Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.6-py3-none-any.whl#sha256=ff213f04bba6c61724d6ea3c6b982edccc9f23c5d8d8a432f71b3574a37ff06f (from https://www.piwheels.org/simple/ingenannot/) 2023-02-20T14:54:08,677 Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.5-py3-none-any.whl#sha256=6f584e9288af2d0582b3aa93f86f78cc4e9dbca8b1efa8a6d018feb7596bd5f3 (from https://www.piwheels.org/simple/ingenannot/) 2023-02-20T14:54:08,677 Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.4-py3-none-any.whl#sha256=b06dc4cffc745860f8bba87cf14f1dd80094e6975842c5c6d49215d85a5b4176 (from https://www.piwheels.org/simple/ingenannot/) 2023-02-20T14:54:08,678 Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.3-py3-none-any.whl#sha256=317988df109d148ad2e15fcb6cc87d4f986546ec1fa5da337be4c34f3e1097f2 (from https://www.piwheels.org/simple/ingenannot/) 2023-02-20T14:54:08,678 Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0-py3-none-any.whl#sha256=a8ebdf5bd0735d68320569b0c02c4430d2a8179e94444468a3340fe836c19db6 (from https://www.piwheels.org/simple/ingenannot/) 2023-02-20T14:54:08,679 Skipping link: not a file: https://www.piwheels.org/simple/ingenannot/ 2023-02-20T14:54:08,680 Skipping link: not a file: https://pypi.org/simple/ingenannot/ 2023-02-20T14:54:08,714 Given no hashes to check 1 links for project 'ingenannot': discarding no candidates 2023-02-20T14:54:08,744 Collecting ingenannot==0.0.7 2023-02-20T14:54:08,749 Created temporary directory: /tmp/pip-unpack-t41p3oi_ 2023-02-20T14:54:09,113 Downloading ingenannot-0.0.7.tar.gz (87 kB) 2023-02-20T14:54:09,442 Added ingenannot==0.0.7 from https://files.pythonhosted.org/packages/10/14/15d8f6266b646779dcc1aaf2c68f38233594e11bf827d7ad7308f33b43b4/ingenannot-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-odqso65t' 2023-02-20T14:54:09,445 Running setup.py (path:/tmp/pip-wheel-c21ob9fh/ingenannot_7251f58d8432408ebdc46c6ee1f84e5c/setup.py) egg_info for package ingenannot 2023-02-20T14:54:09,446 Created temporary directory: /tmp/pip-pip-egg-info-drrjierr 2023-02-20T14:54:09,447 Preparing metadata (setup.py): started 2023-02-20T14:54:09,449 Running command python setup.py egg_info 2023-02-20T14:54:12,334 running egg_info 2023-02-20T14:54:12,339 creating /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info 2023-02-20T14:54:12,433 writing /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/PKG-INFO 2023-02-20T14:54:12,437 writing dependency_links to /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/dependency_links.txt 2023-02-20T14:54:12,441 writing entry points to /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/entry_points.txt 2023-02-20T14:54:12,445 writing requirements to /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/requires.txt 2023-02-20T14:54:12,447 writing top-level names to /tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/top_level.txt 2023-02-20T14:54:12,450 writing manifest file '/tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/SOURCES.txt' 2023-02-20T14:54:12,750 reading manifest file '/tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/SOURCES.txt' 2023-02-20T14:54:12,754 adding license file 'LICENSE' 2023-02-20T14:54:12,764 writing manifest file '/tmp/pip-pip-egg-info-drrjierr/ingenannot.egg-info/SOURCES.txt' 2023-02-20T14:54:12,928 Preparing metadata (setup.py): finished with status 'done' 2023-02-20T14:54:12,942 Source in /tmp/pip-wheel-c21ob9fh/ingenannot_7251f58d8432408ebdc46c6ee1f84e5c has version 0.0.7, which satisfies requirement ingenannot==0.0.7 from https://files.pythonhosted.org/packages/10/14/15d8f6266b646779dcc1aaf2c68f38233594e11bf827d7ad7308f33b43b4/ingenannot-0.0.7.tar.gz 2023-02-20T14:54:12,944 Removed ingenannot==0.0.7 from https://files.pythonhosted.org/packages/10/14/15d8f6266b646779dcc1aaf2c68f38233594e11bf827d7ad7308f33b43b4/ingenannot-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-odqso65t' 2023-02-20T14:54:12,956 Created temporary directory: /tmp/pip-unpack-9u31247z 2023-02-20T14:54:12,957 Building wheels for collected packages: ingenannot 2023-02-20T14:54:12,967 Created temporary directory: /tmp/pip-wheel-1xrcw1dx 2023-02-20T14:54:12,968 Building wheel for ingenannot (setup.py): started 2023-02-20T14:54:12,970 Destination directory: /tmp/pip-wheel-1xrcw1dx 2023-02-20T14:54:12,970 Running command python setup.py bdist_wheel 2023-02-20T14:54:15,830 running bdist_wheel 2023-02-20T14:54:16,725 running build 2023-02-20T14:54:16,726 running build_py 2023-02-20T14:54:16,874 creating build 2023-02-20T14:54:16,875 creating build/lib 2023-02-20T14:54:16,876 creating build/lib/ingenannot 2023-02-20T14:54:16,879 copying ingenannot/version.py -> build/lib/ingenannot 2023-02-20T14:54:16,882 copying ingenannot/__init__.py -> build/lib/ingenannot 2023-02-20T14:54:16,885 copying ingenannot/main.py -> build/lib/ingenannot 2023-02-20T14:54:16,894 creating build/lib/ingenannot/commands 2023-02-20T14:54:16,896 copying ingenannot/commands/compare.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,901 copying ingenannot/commands/utr_refine.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,906 copying ingenannot/commands/exonerate_to_gff.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,909 copying ingenannot/commands/StringtieFilter.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,913 copying ingenannot/commands/validate.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,916 copying ingenannot/commands/strand_annotation_filter.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,920 copying ingenannot/commands/aed.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,924 copying ingenannot/commands/effector_predictor_cmd.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,927 copying ingenannot/commands/rescue_effectors.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,932 copying ingenannot/commands/StringtieStats.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,935 copying ingenannot/commands/command.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,939 copying ingenannot/commands/SupportIsoformFilter.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,943 copying ingenannot/commands/so_classification.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,947 copying ingenannot/commands/aed_compare.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,950 copying ingenannot/commands/AddIsoforms.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,956 copying ingenannot/commands/add_sqanti3_isoforms.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,961 copying ingenannot/commands/__init__.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,965 copying ingenannot/commands/rename.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,969 copying ingenannot/commands/filter.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,973 copying ingenannot/commands/StringtieRefine.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,977 copying ingenannot/commands/isoform_ranking.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,983 copying ingenannot/commands/select.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,988 copying ingenannot/commands/reduce.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,993 copying ingenannot/commands/StringtieJaclip.py -> build/lib/ingenannot/commands 2023-02-20T14:54:16,998 copying ingenannot/commands/clusterize.py -> build/lib/ingenannot/commands 2023-02-20T14:54:17,004 creating build/lib/ingenannot/entities 2023-02-20T14:54:17,005 copying ingenannot/entities/metagene.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,009 copying ingenannot/entities/cluster.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,013 copying ingenannot/entities/intron.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,016 copying ingenannot/entities/transcript.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,020 copying ingenannot/entities/gene.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,024 copying ingenannot/entities/cds.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,027 copying ingenannot/entities/__init__.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,030 copying ingenannot/entities/exon.py -> build/lib/ingenannot/entities 2023-02-20T14:54:17,035 creating build/lib/ingenannot/utils 2023-02-20T14:54:17,037 copying ingenannot/utils/gff_reader.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,042 copying ingenannot/utils/annot_edit_distance.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,046 copying ingenannot/utils/stats.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,050 copying ingenannot/utils/effector_predictor.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,054 copying ingenannot/utils/tool_checker.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,057 copying ingenannot/utils/so_splicing_classifier.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,061 copying ingenannot/utils/statistics.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,064 copying ingenannot/utils/em_operators.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,067 copying ingenannot/utils/graphics.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,071 copying ingenannot/utils/gene_builder.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,075 copying ingenannot/utils/__init__.py -> build/lib/ingenannot/utils 2023-02-20T14:54:17,195 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-02-20T14:54:17,196 setuptools.SetuptoolsDeprecationWarning, 2023-02-20T14:54:17,293 installing to build/bdist.linux-armv7l/wheel 2023-02-20T14:54:17,294 running install 2023-02-20T14:54:17,357 running install_lib 2023-02-20T14:54:17,457 creating build/bdist.linux-armv7l 2023-02-20T14:54:17,457 creating build/bdist.linux-armv7l/wheel 2023-02-20T14:54:17,461 creating build/bdist.linux-armv7l/wheel/ingenannot 2023-02-20T14:54:17,465 creating build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,467 copying build/lib/ingenannot/commands/compare.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,472 copying build/lib/ingenannot/commands/utr_refine.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,476 copying build/lib/ingenannot/commands/exonerate_to_gff.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,481 copying build/lib/ingenannot/commands/StringtieFilter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,485 copying build/lib/ingenannot/commands/validate.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,489 copying build/lib/ingenannot/commands/strand_annotation_filter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,493 copying build/lib/ingenannot/commands/aed.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,498 copying build/lib/ingenannot/commands/effector_predictor_cmd.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,501 copying build/lib/ingenannot/commands/rescue_effectors.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,506 copying build/lib/ingenannot/commands/StringtieStats.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,510 copying build/lib/ingenannot/commands/command.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,514 copying build/lib/ingenannot/commands/SupportIsoformFilter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,519 copying build/lib/ingenannot/commands/so_classification.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,522 copying build/lib/ingenannot/commands/aed_compare.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,525 copying build/lib/ingenannot/commands/AddIsoforms.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,531 copying build/lib/ingenannot/commands/add_sqanti3_isoforms.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,535 copying build/lib/ingenannot/commands/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,539 copying build/lib/ingenannot/commands/rename.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,543 copying build/lib/ingenannot/commands/filter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,547 copying build/lib/ingenannot/commands/StringtieRefine.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,550 copying build/lib/ingenannot/commands/isoform_ranking.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,556 copying build/lib/ingenannot/commands/select.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,561 copying build/lib/ingenannot/commands/reduce.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,565 copying build/lib/ingenannot/commands/StringtieJaclip.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,569 copying build/lib/ingenannot/commands/clusterize.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands 2023-02-20T14:54:17,572 copying build/lib/ingenannot/version.py -> build/bdist.linux-armv7l/wheel/ingenannot 2023-02-20T14:54:17,577 creating build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,578 copying build/lib/ingenannot/utils/gff_reader.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,583 copying build/lib/ingenannot/utils/annot_edit_distance.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,587 copying build/lib/ingenannot/utils/stats.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,591 copying build/lib/ingenannot/utils/effector_predictor.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,596 copying build/lib/ingenannot/utils/tool_checker.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,599 copying build/lib/ingenannot/utils/so_splicing_classifier.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,602 copying build/lib/ingenannot/utils/statistics.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,606 copying build/lib/ingenannot/utils/em_operators.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,609 copying build/lib/ingenannot/utils/graphics.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,613 copying build/lib/ingenannot/utils/gene_builder.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,618 copying build/lib/ingenannot/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils 2023-02-20T14:54:17,623 copying build/lib/ingenannot/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot 2023-02-20T14:54:17,626 copying build/lib/ingenannot/main.py -> build/bdist.linux-armv7l/wheel/ingenannot 2023-02-20T14:54:17,633 creating build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,635 copying build/lib/ingenannot/entities/metagene.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,640 copying build/lib/ingenannot/entities/cluster.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,644 copying build/lib/ingenannot/entities/intron.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,648 copying build/lib/ingenannot/entities/transcript.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,653 copying build/lib/ingenannot/entities/gene.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,656 copying build/lib/ingenannot/entities/cds.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,660 copying build/lib/ingenannot/entities/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,663 copying build/lib/ingenannot/entities/exon.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities 2023-02-20T14:54:17,665 running install_egg_info 2023-02-20T14:54:17,888 running egg_info 2023-02-20T14:54:17,981 writing ingenannot.egg-info/PKG-INFO 2023-02-20T14:54:17,985 writing dependency_links to ingenannot.egg-info/dependency_links.txt 2023-02-20T14:54:17,989 writing entry points to ingenannot.egg-info/entry_points.txt 2023-02-20T14:54:17,991 writing requirements to ingenannot.egg-info/requires.txt 2023-02-20T14:54:17,993 writing top-level names to ingenannot.egg-info/top_level.txt 2023-02-20T14:54:18,101 reading manifest file 'ingenannot.egg-info/SOURCES.txt' 2023-02-20T14:54:18,108 adding license file 'LICENSE' 2023-02-20T14:54:18,119 writing manifest file 'ingenannot.egg-info/SOURCES.txt' 2023-02-20T14:54:18,122 Copying ingenannot.egg-info to build/bdist.linux-armv7l/wheel/ingenannot-0.0.7-py3.7.egg-info 2023-02-20T14:54:18,145 running install_scripts 2023-02-20T14:54:18,308 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-02-20T14:54:18,319 creating build/bdist.linux-armv7l/wheel/ingenannot-0.0.7.dist-info/WHEEL 2023-02-20T14:54:18,323 creating '/tmp/pip-wheel-1xrcw1dx/ingenannot-0.0.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-20T14:54:18,327 adding 'ingenannot/__init__.py' 2023-02-20T14:54:18,334 adding 'ingenannot/main.py' 2023-02-20T14:54:18,337 adding 'ingenannot/version.py' 2023-02-20T14:54:18,347 adding 'ingenannot/commands/AddIsoforms.py' 2023-02-20T14:54:18,350 adding 'ingenannot/commands/StringtieFilter.py' 2023-02-20T14:54:18,353 adding 'ingenannot/commands/StringtieJaclip.py' 2023-02-20T14:54:18,355 adding 'ingenannot/commands/StringtieRefine.py' 2023-02-20T14:54:18,359 adding 'ingenannot/commands/StringtieStats.py' 2023-02-20T14:54:18,363 adding 'ingenannot/commands/SupportIsoformFilter.py' 2023-02-20T14:54:18,366 adding 'ingenannot/commands/__init__.py' 2023-02-20T14:54:18,369 adding 'ingenannot/commands/add_sqanti3_isoforms.py' 2023-02-20T14:54:18,372 adding 'ingenannot/commands/aed.py' 2023-02-20T14:54:18,374 adding 'ingenannot/commands/aed_compare.py' 2023-02-20T14:54:18,377 adding 'ingenannot/commands/clusterize.py' 2023-02-20T14:54:18,379 adding 'ingenannot/commands/command.py' 2023-02-20T14:54:18,383 adding 'ingenannot/commands/compare.py' 2023-02-20T14:54:18,386 adding 'ingenannot/commands/effector_predictor_cmd.py' 2023-02-20T14:54:18,388 adding 'ingenannot/commands/exonerate_to_gff.py' 2023-02-20T14:54:18,391 adding 'ingenannot/commands/filter.py' 2023-02-20T14:54:18,400 adding 'ingenannot/commands/isoform_ranking.py' 2023-02-20T14:54:18,405 adding 'ingenannot/commands/reduce.py' 2023-02-20T14:54:18,408 adding 'ingenannot/commands/rename.py' 2023-02-20T14:54:18,413 adding 'ingenannot/commands/rescue_effectors.py' 2023-02-20T14:54:18,418 adding 'ingenannot/commands/select.py' 2023-02-20T14:54:18,421 adding 'ingenannot/commands/so_classification.py' 2023-02-20T14:54:18,424 adding 'ingenannot/commands/strand_annotation_filter.py' 2023-02-20T14:54:18,428 adding 'ingenannot/commands/utr_refine.py' 2023-02-20T14:54:18,431 adding 'ingenannot/commands/validate.py' 2023-02-20T14:54:18,435 adding 'ingenannot/entities/__init__.py' 2023-02-20T14:54:18,437 adding 'ingenannot/entities/cds.py' 2023-02-20T14:54:18,440 adding 'ingenannot/entities/cluster.py' 2023-02-20T14:54:18,442 adding 'ingenannot/entities/exon.py' 2023-02-20T14:54:18,445 adding 'ingenannot/entities/gene.py' 2023-02-20T14:54:18,447 adding 'ingenannot/entities/intron.py' 2023-02-20T14:54:18,450 adding 'ingenannot/entities/metagene.py' 2023-02-20T14:54:18,455 adding 'ingenannot/entities/transcript.py' 2023-02-20T14:54:18,463 adding 'ingenannot/utils/__init__.py' 2023-02-20T14:54:18,467 adding 'ingenannot/utils/annot_edit_distance.py' 2023-02-20T14:54:18,471 adding 'ingenannot/utils/effector_predictor.py' 2023-02-20T14:54:18,474 adding 'ingenannot/utils/em_operators.py' 2023-02-20T14:54:18,478 adding 'ingenannot/utils/gene_builder.py' 2023-02-20T14:54:18,482 adding 'ingenannot/utils/gff_reader.py' 2023-02-20T14:54:18,486 adding 'ingenannot/utils/graphics.py' 2023-02-20T14:54:18,488 adding 'ingenannot/utils/so_splicing_classifier.py' 2023-02-20T14:54:18,491 adding 'ingenannot/utils/statistics.py' 2023-02-20T14:54:18,495 adding 'ingenannot/utils/stats.py' 2023-02-20T14:54:18,497 adding 'ingenannot/utils/tool_checker.py' 2023-02-20T14:54:18,503 adding 'ingenannot-0.0.7.dist-info/LICENSE' 2023-02-20T14:54:18,507 adding 'ingenannot-0.0.7.dist-info/METADATA' 2023-02-20T14:54:18,509 adding 'ingenannot-0.0.7.dist-info/WHEEL' 2023-02-20T14:54:18,510 adding 'ingenannot-0.0.7.dist-info/entry_points.txt' 2023-02-20T14:54:18,512 adding 'ingenannot-0.0.7.dist-info/top_level.txt' 2023-02-20T14:54:18,515 adding 'ingenannot-0.0.7.dist-info/RECORD' 2023-02-20T14:54:18,523 removing build/bdist.linux-armv7l/wheel 2023-02-20T14:54:18,749 Building wheel for ingenannot (setup.py): finished with status 'done' 2023-02-20T14:54:18,759 Created wheel for ingenannot: filename=ingenannot-0.0.7-py3-none-any.whl size=103171 sha256=2f299719ddf5b0e99ad6cb9414a2ab61674e47422f9bfd000c1b3200c8277832 2023-02-20T14:54:18,761 Stored in directory: /tmp/pip-ephem-wheel-cache-uu6yufee/wheels/30/05/f4/2e9d2883adfcb3a8f99a233418e9bab0f23129854b1aabe9c5 2023-02-20T14:54:18,792 Successfully built ingenannot 2023-02-20T14:54:18,807 Removed build tracker: '/tmp/pip-build-tracker-odqso65t'