2023-02-22T18:10:59,502 Created temporary directory: /tmp/pip-ephem-wheel-cache-w9ssm90b
2023-02-22T18:10:59,508 Created temporary directory: /tmp/pip-build-tracker-1__cbgfg
2023-02-22T18:10:59,509 Initialized build tracking at /tmp/pip-build-tracker-1__cbgfg
2023-02-22T18:10:59,509 Created build tracker: /tmp/pip-build-tracker-1__cbgfg
2023-02-22T18:10:59,510 Entered build tracker: /tmp/pip-build-tracker-1__cbgfg
2023-02-22T18:10:59,511 Created temporary directory: /tmp/pip-wheel-0rl8ro_a
2023-02-22T18:10:59,521 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-22T18:10:59,527 Created temporary directory: /tmp/pip-ephem-wheel-cache-cwlmklc5
2023-02-22T18:10:59,580 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-22T18:10:59,587 2 location(s) to search for versions of damona:
2023-02-22T18:10:59,587 * https://pypi.org/simple/damona/
2023-02-22T18:10:59,587 * https://www.piwheels.org/simple/damona/
2023-02-22T18:10:59,588 Fetching project page and analyzing links: https://pypi.org/simple/damona/
2023-02-22T18:10:59,590 Getting page https://pypi.org/simple/damona/
2023-02-22T18:10:59,593 Found index url https://pypi.org/simple
2023-02-22T18:10:59,786 Fetched page https://pypi.org/simple/damona/ as application/vnd.pypi.simple.v1+json
2023-02-22T18:10:59,799   Found link https://files.pythonhosted.org/packages/cd/9e/27ac1c5e27caa58f2d161dff75c5c4cdd92670440b07e7709802a9459b9c/damona-0.1.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.1.0
2023-02-22T18:10:59,800   Found link https://files.pythonhosted.org/packages/c9/20/7fe4d2f1c34300ed845a3b033a8cd8b3de72b82a25599330b10e2317ca48/damona-0.1.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.1.1
2023-02-22T18:10:59,800   Found link https://files.pythonhosted.org/packages/36/9b/153b2e8849b6cf3b78ac13c3e30fbd4f1774c31b7b34cb849eb3a14bf69c/damona-0.2.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.0
2023-02-22T18:10:59,801   Found link https://files.pythonhosted.org/packages/5d/85/e936fbc729383625e399b7dabd3238995c915084986ec573588855c921ee/damona-0.2.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.1
2023-02-22T18:10:59,802   Found link https://files.pythonhosted.org/packages/d8/72/c819e18fd5dcf8abe904e97240b4adb023e80b73a311ca4cddd0f8b6509c/damona-0.2.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.2
2023-02-22T18:10:59,803   Found link https://files.pythonhosted.org/packages/2a/2f/3eca4d23aad1c0df2a1f708f49fd68de86b47fb3ff0b7270182074adbe24/damona-0.3.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.3.0
2023-02-22T18:10:59,803   Found link https://files.pythonhosted.org/packages/a4/85/cf3ba30aadaf7e322c200ff61874eb24a3ded6d64ad308d15760d26338f1/damona-0.3.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.3.1
2023-02-22T18:10:59,804   Found link https://files.pythonhosted.org/packages/c2/ef/1a8417b608f9a1f46749cea5ef2cd0bef0e2e9449182baa65ef403b9bd6e/damona-0.4.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.0
2023-02-22T18:10:59,805   Found link https://files.pythonhosted.org/packages/66/87/cc314bac96ca0afc29e95d91a07d70c56df5c37cb4209f8bfc4eb959418a/damona-0.4.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.1
2023-02-22T18:10:59,805   Found link https://files.pythonhosted.org/packages/50/5a/2b91d89732ad7eabd61d2060de0ecc94c4a04c25999f199d2cb93ff943e5/damona-0.4.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.2
2023-02-22T18:10:59,806   Found link https://files.pythonhosted.org/packages/e5/d8/0d4fe942e4a6dd2b5a45ac16a038f99dbea115dde61c41aec5f2815ef2a6/damona-0.4.3.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.3
2023-02-22T18:10:59,807   Found link https://files.pythonhosted.org/packages/9e/e0/d085c328e8cc39ca40e2176f3c5c5ffeb66e1271abeeb36f863c5acb8bc1/damona-0.5.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.0
2023-02-22T18:10:59,807   Found link https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.1
2023-02-22T18:10:59,808   Found link https://files.pythonhosted.org/packages/09/b4/f0570169435b2629cac80df83e3140b82a480cdfd795f8f6c54c4c36d53e/damona-0.5.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.2
2023-02-22T18:10:59,813   Found link https://files.pythonhosted.org/packages/34/85/cce2fff4d9e5c90ac7dc665db03e0c134fd23930d6fe7168e3fd48a7899a/damona-0.5.3.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.3
2023-02-22T18:10:59,814   Found link https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.4
2023-02-22T18:10:59,815   Found link https://files.pythonhosted.org/packages/c0/d8/0edd345b42fb10ec5615463a6362c71abbf7182ae0a64a366586a752924a/damona-0.5.5.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.5
2023-02-22T18:10:59,815   Found link https://files.pythonhosted.org/packages/21/64/ec1a9f94d2727191a6b09dddbf464cb190a1c94a7016f5b7d0db7c6ab65a/damona-0.6.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.6.0
2023-02-22T18:10:59,816   Found link https://files.pythonhosted.org/packages/02/98/e4f8fb789585c125ad574845a8f43b6996b97979995cf77f088b6e166a57/damona-0.7.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.7.0
2023-02-22T18:10:59,817   Found link https://files.pythonhosted.org/packages/3d/af/463f5754f4f79152d2ca30c232f95364848b6eccc4e8da0bcd039797c13f/damona-0.7.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.7.1
2023-02-22T18:10:59,817   Found link https://files.pythonhosted.org/packages/b3/e4/7c0cb559030b0a10ef0b8b0e89778fee71357d01c681ff3a8e31633f139f/damona-0.8.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.0
2023-02-22T18:10:59,818   Found link https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.1
2023-02-22T18:10:59,819   Found link https://files.pythonhosted.org/packages/b9/71/804fbd1dafb4f7a2789494ce99f747050496509ba9c7b4ab750c2a1d15cc/damona-0.8.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.2
2023-02-22T18:10:59,820 Fetching project page and analyzing links: https://www.piwheels.org/simple/damona/
2023-02-22T18:10:59,820 Getting page https://www.piwheels.org/simple/damona/
2023-02-22T18:10:59,823 Found index url https://www.piwheels.org/simple
2023-02-22T18:11:00,139 Fetched page https://www.piwheels.org/simple/damona/ as text/html
2023-02-22T18:11:00,156   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.1-py3-none-any.whl#sha256=1876dc816c6b55bdd4e26c3d55f550985eaaece2dd0b51e91198fcb9e23a6bce (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,157   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.0-py3-none-any.whl#sha256=2e21d72a65141ba9d76a6971a8d8c1618964ddc7b0e126ea8282260b974c3b65 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,158   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.1-py3-none-any.whl#sha256=5e66c86b9d54bddb8e202de5271f8eee2126fee535b1d9907ff06574405c9ee5 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,159   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.0-py3-none-any.whl#sha256=5042f04e5365017dbee446034c186e0e74a6e10e69b97159d4e7583d6eb978b8 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,159   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.6.0-py3-none-any.whl#sha256=0c08f84a6315a8a73a113852e981e28107e73b00ea14400876449661d4f4f5ff (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,160   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.5-py3-none-any.whl#sha256=250ccf2df08abd139089d4fb2e79006e5bd203c3a0a52f44d1f9284a73f0d925 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,161   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.4-py3-none-any.whl#sha256=d6be5e498a49e3228ff56e0445cf57642d10bfb8a523b4f6839f5998051feb50 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,161   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.3-py3-none-any.whl#sha256=c4e616966557b5bdf1adb7658f29a695e17d0f74b00c292ec912da0a37907ba8 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,162   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.2-py3-none-any.whl#sha256=96b9d98f2692a8ed1bd3d044f9cbd041d99762fcc2003f9e4c657e7bb885a061 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,163   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.1-py3-none-any.whl#sha256=5a3fb6b370b13c5085238e60671c083d51b2afa8ca94314f8c382b46b4fecc0a (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,164   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.0-py3-none-any.whl#sha256=2b105c2097bf8572e7d57f7b842123852413d4d1266886b21d4f1e94b0d25109 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,164   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.3-py3-none-any.whl#sha256=7b05aa70e5bb4664074b7b3d9b63873f9aa72e29217bf7a971614685c338107e (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,165   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.2-py3-none-any.whl#sha256=326ee5f5e021f463128cc57ff6f3ff6129f46271dfaf4f823a5645f2e94d7aa4 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,166   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.1-py3-none-any.whl#sha256=87fafcd2a349a2c12e3f28edb48015a402a3e50f89c4da8072167483d0d7a200 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,166   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.0-py3-none-any.whl#sha256=131eb91e5a14664d9a717ad2a12025787ed02a761336318d57de6076bbfe0695 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,167   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.1-py3-none-any.whl#sha256=934799d1cf5a920bc199416dc79952e268359cc4ad20d561571fd85e4c2d84dc (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,168   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.0-py3-none-any.whl#sha256=b9bad2b5e81d6bdca4b895a2d7dfcd19a5450509889904d9840f447a3a5a5f11 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,168   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.2.2-py3-none-any.whl#sha256=9165891e105689e76d95ddf46067837a1ee8b13d1d3af36b5af846c1b8ee4b92 (from https://www.piwheels.org/simple/damona/)
2023-02-22T18:11:00,169 Skipping link: not a file: https://www.piwheels.org/simple/damona/
2023-02-22T18:11:00,170 Skipping link: not a file: https://pypi.org/simple/damona/
2023-02-22T18:11:00,214 Given no hashes to check 1 links for project 'damona': discarding no candidates
2023-02-22T18:11:00,242 Collecting damona==0.8.2
2023-02-22T18:11:00,246   Created temporary directory: /tmp/pip-unpack-7vgko3x1
2023-02-22T18:11:00,493   Downloading damona-0.8.2.tar.gz (441 kB)
2023-02-22T18:11:01,558   Added damona==0.8.2 from https://files.pythonhosted.org/packages/b9/71/804fbd1dafb4f7a2789494ce99f747050496509ba9c7b4ab750c2a1d15cc/damona-0.8.2.tar.gz to build tracker '/tmp/pip-build-tracker-1__cbgfg'
2023-02-22T18:11:01,561   Running setup.py (path:/tmp/pip-wheel-0rl8ro_a/damona_9bd684b817064caba1be3bf9db348c71/setup.py) egg_info for package damona
2023-02-22T18:11:01,563   Created temporary directory: /tmp/pip-pip-egg-info-x0m51pa1
2023-02-22T18:11:01,564   Preparing metadata (setup.py): started
2023-02-22T18:11:01,566   Running command python setup.py egg_info
2023-02-22T18:11:04,014   running egg_info
2023-02-22T18:11:04,019   creating /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info
2023-02-22T18:11:04,070   writing /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/PKG-INFO
2023-02-22T18:11:04,078   writing dependency_links to /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/dependency_links.txt
2023-02-22T18:11:04,082   writing entry points to /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/entry_points.txt
2023-02-22T18:11:04,086   writing requirements to /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/requires.txt
2023-02-22T18:11:04,090   writing top-level names to /tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/top_level.txt
2023-02-22T18:11:04,094   writing manifest file '/tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/SOURCES.txt'
2023-02-22T18:11:04,366   reading manifest file '/tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/SOURCES.txt'
2023-02-22T18:11:04,370   reading manifest template 'MANIFEST.in'
2023-02-22T18:11:04,374   warning: no previously-included files matching '__pycache__' found under directory '*'
2023-02-22T18:11:04,377   warning: no previously-included files matching '*pyc' found under directory '*'
2023-02-22T18:11:04,379   warning: no previously-included files matching 'test' found under directory '*'
2023-02-22T18:11:04,383   warning: no files found matching '.requirements_dev.txt'
2023-02-22T18:11:04,386   warning: no files found matching 'damona/shell/*.sh'
2023-02-22T18:11:04,388   no previously-included directories found matching 'test'
2023-02-22T18:11:04,390   no previously-included directories found matching 'doc'
2023-02-22T18:11:04,391   adding license file 'LICENSE'
2023-02-22T18:11:04,408   writing manifest file '/tmp/pip-pip-egg-info-x0m51pa1/damona.egg-info/SOURCES.txt'
2023-02-22T18:11:04,567   Preparing metadata (setup.py): finished with status 'done'
2023-02-22T18:11:04,585   Source in /tmp/pip-wheel-0rl8ro_a/damona_9bd684b817064caba1be3bf9db348c71 has version 0.8.2, which satisfies requirement damona==0.8.2 from https://files.pythonhosted.org/packages/b9/71/804fbd1dafb4f7a2789494ce99f747050496509ba9c7b4ab750c2a1d15cc/damona-0.8.2.tar.gz
2023-02-22T18:11:04,587   Removed damona==0.8.2 from https://files.pythonhosted.org/packages/b9/71/804fbd1dafb4f7a2789494ce99f747050496509ba9c7b4ab750c2a1d15cc/damona-0.8.2.tar.gz from build tracker '/tmp/pip-build-tracker-1__cbgfg'
2023-02-22T18:11:04,601 Created temporary directory: /tmp/pip-unpack-7wlzcx4t
2023-02-22T18:11:04,602 Building wheels for collected packages: damona
2023-02-22T18:11:04,612   Created temporary directory: /tmp/pip-wheel-1c876e87
2023-02-22T18:11:04,613   Building wheel for damona (setup.py): started
2023-02-22T18:11:04,615   Destination directory: /tmp/pip-wheel-1c876e87
2023-02-22T18:11:04,615   Running command python setup.py bdist_wheel
2023-02-22T18:11:06,755   running bdist_wheel
2023-02-22T18:11:06,900   running build
2023-02-22T18:11:06,901   running build_py
2023-02-22T18:11:06,959   creating build
2023-02-22T18:11:06,960   creating build/lib
2023-02-22T18:11:06,961   creating build/lib/damona
2023-02-22T18:11:06,964   copying damona/__init__.py -> build/lib/damona
2023-02-22T18:11:06,968   copying damona/zenodo.py -> build/lib/damona
2023-02-22T18:11:06,973   copying damona/config.py -> build/lib/damona
2023-02-22T18:11:06,977   copying damona/common.py -> build/lib/damona
2023-02-22T18:11:06,981   copying damona/install.py -> build/lib/damona
2023-02-22T18:11:06,986   copying damona/environ.py -> build/lib/damona
2023-02-22T18:11:06,990   copying damona/registry.py -> build/lib/damona
2023-02-22T18:11:06,995   copying damona/builders.py -> build/lib/damona
2023-02-22T18:11:06,999   copying damona/admin.py -> build/lib/damona
2023-02-22T18:11:07,003   copying damona/script.py -> build/lib/damona
2023-02-22T18:11:07,009   creating build/lib/damona/shell
2023-02-22T18:11:07,011   copying damona/shell/__init__.py -> build/lib/damona/shell
2023-02-22T18:11:07,016   creating build/lib/damona/library
2023-02-22T18:11:07,017   copying damona/library/__init__.py -> build/lib/damona/library
2023-02-22T18:11:07,022   creating build/lib/damona/software
2023-02-22T18:11:07,023   copying damona/software/__init__.py -> build/lib/damona/software
2023-02-22T18:11:07,027   creating build/lib/damona/papers
2023-02-22T18:11:07,029   copying damona/papers/__init__.py -> build/lib/damona/papers
2023-02-22T18:11:07,033   creating build/lib/damona/biocontainers
2023-02-22T18:11:07,035   copying damona/biocontainers/__init__.py -> build/lib/damona/biocontainers
2023-02-22T18:11:07,039   creating build/lib/damona/shell/bash
2023-02-22T18:11:07,040   copying damona/shell/bash/__init__.py -> build/lib/damona/shell/bash
2023-02-22T18:11:07,110   creating build/lib/damona/shell/fish
2023-02-22T18:11:07,112   copying damona/shell/fish/damona.fish -> build/lib/damona/shell/fish
2023-02-22T18:11:07,118   copying damona/shell/bash/damona.sh -> build/lib/damona/shell/bash
2023-02-22T18:11:07,122   creating build/lib/damona/library/R
2023-02-22T18:11:07,124   copying damona/library/R/Singularity.R_3.6.3 -> build/lib/damona/library/R
2023-02-22T18:11:07,128   copying damona/library/R/Singularity.R_4.0.2 -> build/lib/damona/library/R
2023-02-22T18:11:07,132   creating build/lib/damona/library/conda
2023-02-22T18:11:07,134   copying damona/library/conda/Singularity.conda_4.9.2 -> build/lib/damona/library/conda
2023-02-22T18:11:07,139   copying damona/library/conda/Singularity.conda_4.7.12 -> build/lib/damona/library/conda
2023-02-22T18:11:07,143   copying damona/library/R/registry.yaml -> build/lib/damona/library/R
2023-02-22T18:11:07,147   copying damona/library/conda/registry.yaml -> build/lib/damona/library/conda
2023-02-22T18:11:07,151   creating build/lib/damona/software/falco
2023-02-22T18:11:07,153   copying damona/software/falco/Singularity.falco_1.0.0 -> build/lib/damona/software/falco
2023-02-22T18:11:07,157   copying damona/software/falco/Singularity.falco_0.2.1 -> build/lib/damona/software/falco
2023-02-22T18:11:07,161   creating build/lib/damona/software/shustring
2023-02-22T18:11:07,163   copying damona/software/shustring/Singularity.shustring_2.6.0 -> build/lib/damona/software/shustring
2023-02-22T18:11:07,167   creating build/lib/damona/software/bbtools
2023-02-22T18:11:07,169   copying damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/lib/damona/software/bbtools
2023-02-22T18:11:07,173   creating build/lib/damona/software/sequana_perl_tools
2023-02-22T18:11:07,175   copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/lib/damona/software/sequana_perl_tools
2023-02-22T18:11:07,179   copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/lib/damona/software/sequana_perl_tools
2023-02-22T18:11:07,183   creating build/lib/damona/software/idr
2023-02-22T18:11:07,185   copying damona/software/idr/Singularity.idr_2.0.3 -> build/lib/damona/software/idr
2023-02-22T18:11:07,190   creating build/lib/damona/software/sequana
2023-02-22T18:11:07,191   copying damona/software/sequana/Singularity.sequana_0.12.6 -> build/lib/damona/software/sequana
2023-02-22T18:11:07,196   creating build/lib/damona/software/canu
2023-02-22T18:11:07,197   copying damona/software/canu/Singularity.canu_1.8.0 -> build/lib/damona/software/canu
2023-02-22T18:11:07,202   copying damona/software/canu/Singularity.canu_1.6.0 -> build/lib/damona/software/canu
2023-02-22T18:11:07,206   creating build/lib/damona/software/graphviz
2023-02-22T18:11:07,208   copying damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/lib/damona/software/graphviz
2023-02-22T18:11:07,212   creating build/lib/damona/software/fastqc
2023-02-22T18:11:07,214   copying damona/software/fastqc/Singularity.fastqc_0.11.9_py3 -> build/lib/damona/software/fastqc
2023-02-22T18:11:07,219   copying damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/lib/damona/software/fastqc
2023-02-22T18:11:07,223   copying damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/lib/damona/software/fastqc
2023-02-22T18:11:07,227   creating build/lib/damona/software/rnadiff
2023-02-22T18:11:07,228   copying damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/lib/damona/software/rnadiff
2023-02-22T18:11:07,233   creating build/lib/damona/software/bowtie
2023-02-22T18:11:07,235   copying damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/lib/damona/software/bowtie
2023-02-22T18:11:07,239   creating build/lib/damona/software/bcl2fastq
2023-02-22T18:11:07,241   copying damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/lib/damona/software/bcl2fastq
2023-02-22T18:11:07,245   creating build/lib/damona/software/fastp
2023-02-22T18:11:07,247   copying damona/software/fastp/Singularity.fastp_0.23.2 -> build/lib/damona/software/fastp
2023-02-22T18:11:07,251   creating build/lib/damona/software/pigz
2023-02-22T18:11:07,253   copying damona/software/pigz/Singularity.pigz_2.4.0 -> build/lib/damona/software/pigz
2023-02-22T18:11:07,258   creating build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,260   copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.2 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,265   copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.5 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,269   copying damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,273   copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.1 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,278   copying damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,282   copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.3 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,286   copying damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,291   copying damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,297   creating build/lib/damona/software/rtools
2023-02-22T18:11:07,299   copying damona/software/rtools/Singularity.rtools_1.0.0 -> build/lib/damona/software/rtools
2023-02-22T18:11:07,304   copying damona/software/rtools/Singularity.rtools_1.2.0 -> build/lib/damona/software/rtools
2023-02-22T18:11:07,309   copying damona/software/rtools/Singularity.rtools_1.1.0 -> build/lib/damona/software/rtools
2023-02-22T18:11:07,312   creating build/lib/damona/software/bedtools
2023-02-22T18:11:07,314   copying damona/software/bedtools/Singularity.bedtools_2.30.0 -> build/lib/damona/software/bedtools
2023-02-22T18:11:07,318   creating build/lib/damona/software/samtools
2023-02-22T18:11:07,320   copying damona/software/samtools/Singularity.samtools_1.15.0 -> build/lib/damona/software/samtools
2023-02-22T18:11:07,325   creating build/lib/damona/software/art
2023-02-22T18:11:07,327   copying damona/software/art/Singularity.art_3.11.14 -> build/lib/damona/software/art
2023-02-22T18:11:07,331   copying damona/software/art/Singularity.art_2.5.8 -> build/lib/damona/software/art
2023-02-22T18:11:07,335   creating build/lib/damona/software/rnaseqc
2023-02-22T18:11:07,336   copying damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/lib/damona/software/rnaseqc
2023-02-22T18:11:07,341   creating build/lib/damona/software/trf
2023-02-22T18:11:07,343   copying damona/software/trf/Singularity.trf_4.10.0 -> build/lib/damona/software/trf
2023-02-22T18:11:07,347   creating build/lib/damona/software/bowtie2
2023-02-22T18:11:07,348   copying damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/lib/damona/software/bowtie2
2023-02-22T18:11:07,353   copying damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/lib/damona/software/bowtie2
2023-02-22T18:11:07,357   creating build/lib/damona/software/minimap2
2023-02-22T18:11:07,359   copying damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/lib/damona/software/minimap2
2023-02-22T18:11:07,363   copying damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/lib/damona/software/minimap2
2023-02-22T18:11:07,367   creating build/lib/damona/software/bamtools
2023-02-22T18:11:07,369   copying damona/software/bamtools/Singularity.bamtools_2.5.2 -> build/lib/damona/software/bamtools
2023-02-22T18:11:07,373   creating build/lib/damona/software/seqkit
2023-02-22T18:11:07,375   copying damona/software/seqkit/Singularity.seqkit_2.1.0 -> build/lib/damona/software/seqkit
2023-02-22T18:11:07,379   creating build/lib/damona/software/homer
2023-02-22T18:11:07,381   copying damona/software/homer/Singularity.homer_4.11.0 -> build/lib/damona/software/homer
2023-02-22T18:11:07,386   creating build/lib/damona/software/sequana_ribofinder
2023-02-22T18:11:07,387   copying damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0 -> build/lib/damona/software/sequana_ribofinder
2023-02-22T18:11:07,392   creating build/lib/damona/software/prokka
2023-02-22T18:11:07,394   copying damona/software/prokka/Singularity.prokka_1.14.5 -> build/lib/damona/software/prokka
2023-02-22T18:11:07,398   creating build/lib/damona/software/flye
2023-02-22T18:11:07,400   copying damona/software/flye/Singularity.flye_2.9.0 -> build/lib/damona/software/flye
2023-02-22T18:11:07,404   creating build/lib/damona/software/sequana_denovo
2023-02-22T18:11:07,406   copying damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2 -> build/lib/damona/software/sequana_denovo
2023-02-22T18:11:07,411   creating build/lib/damona/software/quast
2023-02-22T18:11:07,413   copying damona/software/quast/Singularity.quast_5.0.2 -> build/lib/damona/software/quast
2023-02-22T18:11:07,417   creating build/lib/damona/software/gzip
2023-02-22T18:11:07,419   copying damona/software/gzip/Singularity.gzip_1.9.0 -> build/lib/damona/software/gzip
2023-02-22T18:11:07,423   creating build/lib/damona/software/snpeff
2023-02-22T18:11:07,425   copying damona/software/snpeff/Singularity.snpeff_5.1.0 -> build/lib/damona/software/snpeff
2023-02-22T18:11:07,429   creating build/lib/damona/software/igvtools
2023-02-22T18:11:07,431   copying damona/software/igvtools/Singularity.igvtools_2.12.0 -> build/lib/damona/software/igvtools
2023-02-22T18:11:07,436   creating build/lib/damona/software/seqtk
2023-02-22T18:11:07,438   copying damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/lib/damona/software/seqtk
2023-02-22T18:11:07,442   creating build/lib/damona/software/salmon
2023-02-22T18:11:07,444   copying damona/software/salmon/Singularity.salmon_1.3.0 -> build/lib/damona/software/salmon
2023-02-22T18:11:07,448   creating build/lib/damona/software/ucsc
2023-02-22T18:11:07,450   copying damona/software/ucsc/Singularity.ucsc_3.7.7 -> build/lib/damona/software/ucsc
2023-02-22T18:11:07,454   creating build/lib/damona/software/bioconvert
2023-02-22T18:11:07,456   copying damona/software/bioconvert/Singularity.bioconvert_0.6.2 -> build/lib/damona/software/bioconvert
2023-02-22T18:11:07,460   copying damona/software/bioconvert/Singularity.bioconvert_0.6.3 -> build/lib/damona/software/bioconvert
2023-02-22T18:11:07,464   copying damona/software/bioconvert/Singularity.bioconvert_0.6.1 -> build/lib/damona/software/bioconvert
2023-02-22T18:11:07,468   creating build/lib/damona/software/gffread
2023-02-22T18:11:07,470   copying damona/software/gffread/Singularity.gffread_0.12.1 -> build/lib/damona/software/gffread
2023-02-22T18:11:07,475   creating build/lib/damona/software/kraken
2023-02-22T18:11:07,477   copying damona/software/kraken/Singularity.kraken_1.1.0 -> build/lib/damona/software/kraken
2023-02-22T18:11:07,481   copying damona/software/kraken/Singularity.kraken_2.0.9 -> build/lib/damona/software/kraken
2023-02-22T18:11:07,485   creating build/lib/damona/software/phantompeakqualtools
2023-02-22T18:11:07,487   copying damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/lib/damona/software/phantompeakqualtools
2023-02-22T18:11:07,491   copying damona/software/falco/registry.yaml -> build/lib/damona/software/falco
2023-02-22T18:11:07,496   copying damona/software/shustring/registry.yaml -> build/lib/damona/software/shustring
2023-02-22T18:11:07,500   copying damona/software/bbtools/registry.yaml -> build/lib/damona/software/bbtools
2023-02-22T18:11:07,504   copying damona/software/sequana_perl_tools/registry.yaml -> build/lib/damona/software/sequana_perl_tools
2023-02-22T18:11:07,509   copying damona/software/idr/registry.yaml -> build/lib/damona/software/idr
2023-02-22T18:11:07,513   copying damona/software/sequana/registry.yaml -> build/lib/damona/software/sequana
2023-02-22T18:11:07,518   copying damona/software/canu/registry.yaml -> build/lib/damona/software/canu
2023-02-22T18:11:07,523   copying damona/software/graphviz/registry.yaml -> build/lib/damona/software/graphviz
2023-02-22T18:11:07,527   copying damona/software/fastqc/registry.yaml -> build/lib/damona/software/fastqc
2023-02-22T18:11:07,532   copying damona/software/rnadiff/registry.yaml -> build/lib/damona/software/rnadiff
2023-02-22T18:11:07,536   copying damona/software/bowtie/registry.yaml -> build/lib/damona/software/bowtie
2023-02-22T18:11:07,540   copying damona/software/bcl2fastq/registry.yaml -> build/lib/damona/software/bcl2fastq
2023-02-22T18:11:07,544   copying damona/software/fastp/registry.yaml -> build/lib/damona/software/fastp
2023-02-22T18:11:07,548   copying damona/software/pigz/registry.yaml -> build/lib/damona/software/pigz
2023-02-22T18:11:07,553   copying damona/software/sequana_tools/registry.yaml -> build/lib/damona/software/sequana_tools
2023-02-22T18:11:07,558   copying damona/software/rtools/registry.yaml -> build/lib/damona/software/rtools
2023-02-22T18:11:07,562   copying damona/software/bedtools/registry.yaml -> build/lib/damona/software/bedtools
2023-02-22T18:11:07,566   copying damona/software/samtools/registry.yaml -> build/lib/damona/software/samtools
2023-02-22T18:11:07,570   copying damona/software/art/registry.yaml -> build/lib/damona/software/art
2023-02-22T18:11:07,575   copying damona/software/rnaseqc/registry.yaml -> build/lib/damona/software/rnaseqc
2023-02-22T18:11:07,579   copying damona/software/trf/registry.yaml -> build/lib/damona/software/trf
2023-02-22T18:11:07,584   copying damona/software/bowtie2/registry.yaml -> build/lib/damona/software/bowtie2
2023-02-22T18:11:07,588   copying damona/software/minimap2/registry.yaml -> build/lib/damona/software/minimap2
2023-02-22T18:11:07,592   copying damona/software/bamtools/registry.yaml -> build/lib/damona/software/bamtools
2023-02-22T18:11:07,596   copying damona/software/seqkit/registry.yaml -> build/lib/damona/software/seqkit
2023-02-22T18:11:07,601   copying damona/software/homer/registry.yaml -> build/lib/damona/software/homer
2023-02-22T18:11:07,605   copying damona/software/sequana_ribofinder/registry.yaml -> build/lib/damona/software/sequana_ribofinder
2023-02-22T18:11:07,609   copying damona/software/prokka/registry.yaml -> build/lib/damona/software/prokka
2023-02-22T18:11:07,613   copying damona/software/flye/registry.yaml -> build/lib/damona/software/flye
2023-02-22T18:11:07,618   copying damona/software/sequana_denovo/registry.yaml -> build/lib/damona/software/sequana_denovo
2023-02-22T18:11:07,622   copying damona/software/quast/registry.yaml -> build/lib/damona/software/quast
2023-02-22T18:11:07,627   copying damona/software/gzip/registry.yaml -> build/lib/damona/software/gzip
2023-02-22T18:11:07,631   copying damona/software/igvtools/registry.yaml -> build/lib/damona/software/igvtools
2023-02-22T18:11:07,635   copying damona/software/seqtk/registry.yaml -> build/lib/damona/software/seqtk
2023-02-22T18:11:07,639   copying damona/software/salmon/registry.yaml -> build/lib/damona/software/salmon
2023-02-22T18:11:07,644   copying damona/software/ucsc/registry.yaml -> build/lib/damona/software/ucsc
2023-02-22T18:11:07,648   copying damona/software/bioconvert/registry.yaml -> build/lib/damona/software/bioconvert
2023-02-22T18:11:07,652   creating build/lib/damona/software/hisat2
2023-02-22T18:11:07,654   copying damona/software/hisat2/registry.yaml -> build/lib/damona/software/hisat2
2023-02-22T18:11:07,659   copying damona/software/gffread/registry.yaml -> build/lib/damona/software/gffread
2023-02-22T18:11:07,663   copying damona/software/kraken/registry.yaml -> build/lib/damona/software/kraken
2023-02-22T18:11:07,667   copying damona/software/phantompeakqualtools/registry.yaml -> build/lib/damona/software/phantompeakqualtools
2023-02-22T18:11:07,671   copying damona/biocontainers/registry.yaml -> build/lib/damona/biocontainers
2023-02-22T18:11:07,871   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-02-22T18:11:07,871     setuptools.SetuptoolsDeprecationWarning,
2023-02-22T18:11:07,928   installing to build/bdist.linux-armv7l/wheel
2023-02-22T18:11:07,929   running install
2023-02-22T18:11:07,991   running install_lib
2023-02-22T18:11:08,047   creating build/bdist.linux-armv7l
2023-02-22T18:11:08,049   creating build/bdist.linux-armv7l/wheel
2023-02-22T18:11:08,053   creating build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,056   copying build/lib/damona/__init__.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,061   copying build/lib/damona/zenodo.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,068   creating build/bdist.linux-armv7l/wheel/damona/shell
2023-02-22T18:11:08,070   copying build/lib/damona/shell/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell
2023-02-22T18:11:08,075   creating build/bdist.linux-armv7l/wheel/damona/shell/fish
2023-02-22T18:11:08,078   copying build/lib/damona/shell/fish/damona.fish -> build/bdist.linux-armv7l/wheel/damona/shell/fish
2023-02-22T18:11:08,083   creating build/bdist.linux-armv7l/wheel/damona/shell/bash
2023-02-22T18:11:08,086   copying build/lib/damona/shell/bash/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell/bash
2023-02-22T18:11:08,090   copying build/lib/damona/shell/bash/damona.sh -> build/bdist.linux-armv7l/wheel/damona/shell/bash
2023-02-22T18:11:08,096   copying build/lib/damona/config.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,101   copying build/lib/damona/common.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,107   creating build/bdist.linux-armv7l/wheel/damona/library
2023-02-22T18:11:08,109   copying build/lib/damona/library/__init__.py -> build/bdist.linux-armv7l/wheel/damona/library
2023-02-22T18:11:08,115   creating build/bdist.linux-armv7l/wheel/damona/library/R
2023-02-22T18:11:08,117   copying build/lib/damona/library/R/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/R
2023-02-22T18:11:08,122   copying build/lib/damona/library/R/Singularity.R_3.6.3 -> build/bdist.linux-armv7l/wheel/damona/library/R
2023-02-22T18:11:08,126   copying build/lib/damona/library/R/Singularity.R_4.0.2 -> build/bdist.linux-armv7l/wheel/damona/library/R
2023-02-22T18:11:08,131   creating build/bdist.linux-armv7l/wheel/damona/library/conda
2023-02-22T18:11:08,134   copying build/lib/damona/library/conda/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/conda
2023-02-22T18:11:08,139   copying build/lib/damona/library/conda/Singularity.conda_4.9.2 -> build/bdist.linux-armv7l/wheel/damona/library/conda
2023-02-22T18:11:08,143   copying build/lib/damona/library/conda/Singularity.conda_4.7.12 -> build/bdist.linux-armv7l/wheel/damona/library/conda
2023-02-22T18:11:08,148   copying build/lib/damona/install.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,156   creating build/bdist.linux-armv7l/wheel/damona/software
2023-02-22T18:11:08,160   creating build/bdist.linux-armv7l/wheel/damona/software/falco
2023-02-22T18:11:08,162   copying build/lib/damona/software/falco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/falco
2023-02-22T18:11:08,167   copying build/lib/damona/software/falco/Singularity.falco_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/falco
2023-02-22T18:11:08,171   copying build/lib/damona/software/falco/Singularity.falco_0.2.1 -> build/bdist.linux-armv7l/wheel/damona/software/falco
2023-02-22T18:11:08,177   creating build/bdist.linux-armv7l/wheel/damona/software/shustring
2023-02-22T18:11:08,179   copying build/lib/damona/software/shustring/Singularity.shustring_2.6.0 -> build/bdist.linux-armv7l/wheel/damona/software/shustring
2023-02-22T18:11:08,183   copying build/lib/damona/software/shustring/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/shustring
2023-02-22T18:11:08,189   creating build/bdist.linux-armv7l/wheel/damona/software/bbtools
2023-02-22T18:11:08,190   copying build/lib/damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/bdist.linux-armv7l/wheel/damona/software/bbtools
2023-02-22T18:11:08,194   copying build/lib/damona/software/bbtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bbtools
2023-02-22T18:11:08,199   creating build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools
2023-02-22T18:11:08,201   copying build/lib/damona/software/sequana_perl_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools
2023-02-22T18:11:08,205   copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools
2023-02-22T18:11:08,209   copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools
2023-02-22T18:11:08,213   creating build/bdist.linux-armv7l/wheel/damona/software/idr
2023-02-22T18:11:08,217   copying build/lib/damona/software/idr/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/idr
2023-02-22T18:11:08,221   copying build/lib/damona/software/idr/Singularity.idr_2.0.3 -> build/bdist.linux-armv7l/wheel/damona/software/idr
2023-02-22T18:11:08,226   creating build/bdist.linux-armv7l/wheel/damona/software/sequana
2023-02-22T18:11:08,227   copying build/lib/damona/software/sequana/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana
2023-02-22T18:11:08,231   copying build/lib/damona/software/sequana/Singularity.sequana_0.12.6 -> build/bdist.linux-armv7l/wheel/damona/software/sequana
2023-02-22T18:11:08,236   creating build/bdist.linux-armv7l/wheel/damona/software/canu
2023-02-22T18:11:08,238   copying build/lib/damona/software/canu/Singularity.canu_1.8.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu
2023-02-22T18:11:08,242   copying build/lib/damona/software/canu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/canu
2023-02-22T18:11:08,246   copying build/lib/damona/software/canu/Singularity.canu_1.6.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu
2023-02-22T18:11:08,249   copying build/lib/damona/software/__init__.py -> build/bdist.linux-armv7l/wheel/damona/software
2023-02-22T18:11:08,253   creating build/bdist.linux-armv7l/wheel/damona/software/graphviz
2023-02-22T18:11:08,255   copying build/lib/damona/software/graphviz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/graphviz
2023-02-22T18:11:08,259   copying build/lib/damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/bdist.linux-armv7l/wheel/damona/software/graphviz
2023-02-22T18:11:08,264   creating build/bdist.linux-armv7l/wheel/damona/software/fastqc
2023-02-22T18:11:08,266   copying build/lib/damona/software/fastqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/fastqc
2023-02-22T18:11:08,270   copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.9_py3 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc
2023-02-22T18:11:08,273   copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc
2023-02-22T18:11:08,277   copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc
2023-02-22T18:11:08,282   creating build/bdist.linux-armv7l/wheel/damona/software/rnadiff
2023-02-22T18:11:08,284   copying build/lib/damona/software/rnadiff/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff
2023-02-22T18:11:08,288   copying build/lib/damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff
2023-02-22T18:11:08,293   creating build/bdist.linux-armv7l/wheel/damona/software/bowtie
2023-02-22T18:11:08,295   copying build/lib/damona/software/bowtie/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie
2023-02-22T18:11:08,299   copying build/lib/damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie
2023-02-22T18:11:08,303   creating build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq
2023-02-22T18:11:08,305   copying build/lib/damona/software/bcl2fastq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq
2023-02-22T18:11:08,309   copying build/lib/damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq
2023-02-22T18:11:08,314   creating build/bdist.linux-armv7l/wheel/damona/software/fastp
2023-02-22T18:11:08,315   copying build/lib/damona/software/fastp/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/fastp
2023-02-22T18:11:08,319   copying build/lib/damona/software/fastp/Singularity.fastp_0.23.2 -> build/bdist.linux-armv7l/wheel/damona/software/fastp
2023-02-22T18:11:08,324   creating build/bdist.linux-armv7l/wheel/damona/software/pigz
2023-02-22T18:11:08,326   copying build/lib/damona/software/pigz/Singularity.pigz_2.4.0 -> build/bdist.linux-armv7l/wheel/damona/software/pigz
2023-02-22T18:11:08,330   copying build/lib/damona/software/pigz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/pigz
2023-02-22T18:11:08,334   creating build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,336   copying build/lib/damona/software/sequana_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,341   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.2 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,344   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.5 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,348   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,352   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.1 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,355   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,359   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.3 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,363   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,366   copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools
2023-02-22T18:11:08,371   creating build/bdist.linux-armv7l/wheel/damona/software/rtools
2023-02-22T18:11:08,373   copying build/lib/damona/software/rtools/Singularity.rtools_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools
2023-02-22T18:11:08,377   copying build/lib/damona/software/rtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rtools
2023-02-22T18:11:08,381   copying build/lib/damona/software/rtools/Singularity.rtools_1.2.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools
2023-02-22T18:11:08,385   copying build/lib/damona/software/rtools/Singularity.rtools_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools
2023-02-22T18:11:08,390   creating build/bdist.linux-armv7l/wheel/damona/software/bedtools
2023-02-22T18:11:08,392   copying build/lib/damona/software/bedtools/Singularity.bedtools_2.30.0 -> build/bdist.linux-armv7l/wheel/damona/software/bedtools
2023-02-22T18:11:08,396   copying build/lib/damona/software/bedtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bedtools
2023-02-22T18:11:08,401   creating build/bdist.linux-armv7l/wheel/damona/software/samtools
2023-02-22T18:11:08,402   copying build/lib/damona/software/samtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/samtools
2023-02-22T18:11:08,407   copying build/lib/damona/software/samtools/Singularity.samtools_1.15.0 -> build/bdist.linux-armv7l/wheel/damona/software/samtools
2023-02-22T18:11:08,414   creating build/bdist.linux-armv7l/wheel/damona/software/art
2023-02-22T18:11:08,416   copying build/lib/damona/software/art/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/art
2023-02-22T18:11:08,420   copying build/lib/damona/software/art/Singularity.art_3.11.14 -> build/bdist.linux-armv7l/wheel/damona/software/art
2023-02-22T18:11:08,424   copying build/lib/damona/software/art/Singularity.art_2.5.8 -> build/bdist.linux-armv7l/wheel/damona/software/art
2023-02-22T18:11:08,429   creating build/bdist.linux-armv7l/wheel/damona/software/rnaseqc
2023-02-22T18:11:08,431   copying build/lib/damona/software/rnaseqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc
2023-02-22T18:11:08,435   copying build/lib/damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc
2023-02-22T18:11:08,440   creating build/bdist.linux-armv7l/wheel/damona/software/trf
2023-02-22T18:11:08,441   copying build/lib/damona/software/trf/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/trf
2023-02-22T18:11:08,446   copying build/lib/damona/software/trf/Singularity.trf_4.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/trf
2023-02-22T18:11:08,451   creating build/bdist.linux-armv7l/wheel/damona/software/bowtie2
2023-02-22T18:11:08,453   copying build/lib/damona/software/bowtie2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2
2023-02-22T18:11:08,459   copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2
2023-02-22T18:11:08,463   copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2
2023-02-22T18:11:08,468   creating build/bdist.linux-armv7l/wheel/damona/software/minimap2
2023-02-22T18:11:08,469   copying build/lib/damona/software/minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/minimap2
2023-02-22T18:11:08,473   copying build/lib/damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2
2023-02-22T18:11:08,477   copying build/lib/damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2
2023-02-22T18:11:08,482   creating build/bdist.linux-armv7l/wheel/damona/software/bamtools
2023-02-22T18:11:08,484   copying build/lib/damona/software/bamtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bamtools
2023-02-22T18:11:08,488   copying build/lib/damona/software/bamtools/Singularity.bamtools_2.5.2 -> build/bdist.linux-armv7l/wheel/damona/software/bamtools
2023-02-22T18:11:08,493   creating build/bdist.linux-armv7l/wheel/damona/software/seqkit
2023-02-22T18:11:08,495   copying build/lib/damona/software/seqkit/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/seqkit
2023-02-22T18:11:08,500   copying build/lib/damona/software/seqkit/Singularity.seqkit_2.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqkit
2023-02-22T18:11:08,506   creating build/bdist.linux-armv7l/wheel/damona/software/homer
2023-02-22T18:11:08,508   copying build/lib/damona/software/homer/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/homer
2023-02-22T18:11:08,512   copying build/lib/damona/software/homer/Singularity.homer_4.11.0 -> build/bdist.linux-armv7l/wheel/damona/software/homer
2023-02-22T18:11:08,517   creating build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder
2023-02-22T18:11:08,519   copying build/lib/damona/software/sequana_ribofinder/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder
2023-02-22T18:11:08,522   copying build/lib/damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder
2023-02-22T18:11:08,527   creating build/bdist.linux-armv7l/wheel/damona/software/prokka
2023-02-22T18:11:08,529   copying build/lib/damona/software/prokka/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/prokka
2023-02-22T18:11:08,533   copying build/lib/damona/software/prokka/Singularity.prokka_1.14.5 -> build/bdist.linux-armv7l/wheel/damona/software/prokka
2023-02-22T18:11:08,538   creating build/bdist.linux-armv7l/wheel/damona/software/flye
2023-02-22T18:11:08,540   copying build/lib/damona/software/flye/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/flye
2023-02-22T18:11:08,544   copying build/lib/damona/software/flye/Singularity.flye_2.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/flye
2023-02-22T18:11:08,548   creating build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo
2023-02-22T18:11:08,550   copying build/lib/damona/software/sequana_denovo/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo
2023-02-22T18:11:08,554   copying build/lib/damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo
2023-02-22T18:11:08,559   creating build/bdist.linux-armv7l/wheel/damona/software/quast
2023-02-22T18:11:08,561   copying build/lib/damona/software/quast/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/quast
2023-02-22T18:11:08,565   copying build/lib/damona/software/quast/Singularity.quast_5.0.2 -> build/bdist.linux-armv7l/wheel/damona/software/quast
2023-02-22T18:11:08,569   creating build/bdist.linux-armv7l/wheel/damona/software/gzip
2023-02-22T18:11:08,571   copying build/lib/damona/software/gzip/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/gzip
2023-02-22T18:11:08,575   copying build/lib/damona/software/gzip/Singularity.gzip_1.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/gzip
2023-02-22T18:11:08,579   creating build/bdist.linux-armv7l/wheel/damona/software/snpeff
2023-02-22T18:11:08,581   copying build/lib/damona/software/snpeff/Singularity.snpeff_5.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/snpeff
2023-02-22T18:11:08,586   creating build/bdist.linux-armv7l/wheel/damona/software/igvtools
2023-02-22T18:11:08,588   copying build/lib/damona/software/igvtools/Singularity.igvtools_2.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/igvtools
2023-02-22T18:11:08,592   copying build/lib/damona/software/igvtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/igvtools
2023-02-22T18:11:08,596   creating build/bdist.linux-armv7l/wheel/damona/software/seqtk
2023-02-22T18:11:08,598   copying build/lib/damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqtk
2023-02-22T18:11:08,602   copying build/lib/damona/software/seqtk/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/seqtk
2023-02-22T18:11:08,607   creating build/bdist.linux-armv7l/wheel/damona/software/salmon
2023-02-22T18:11:08,608   copying build/lib/damona/software/salmon/Singularity.salmon_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/salmon
2023-02-22T18:11:08,612   copying build/lib/damona/software/salmon/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/salmon
2023-02-22T18:11:08,617   creating build/bdist.linux-armv7l/wheel/damona/software/ucsc
2023-02-22T18:11:08,619   copying build/lib/damona/software/ucsc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/ucsc
2023-02-22T18:11:08,622   copying build/lib/damona/software/ucsc/Singularity.ucsc_3.7.7 -> build/bdist.linux-armv7l/wheel/damona/software/ucsc
2023-02-22T18:11:08,627   creating build/bdist.linux-armv7l/wheel/damona/software/bioconvert
2023-02-22T18:11:08,628   copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.2 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert
2023-02-22T18:11:08,632   copying build/lib/damona/software/bioconvert/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert
2023-02-22T18:11:08,636   copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.3 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert
2023-02-22T18:11:08,640   copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.1 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert
2023-02-22T18:11:08,644   creating build/bdist.linux-armv7l/wheel/damona/software/hisat2
2023-02-22T18:11:08,646   copying build/lib/damona/software/hisat2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/hisat2
2023-02-22T18:11:08,651   creating build/bdist.linux-armv7l/wheel/damona/software/gffread
2023-02-22T18:11:08,653   copying build/lib/damona/software/gffread/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/gffread
2023-02-22T18:11:08,657   copying build/lib/damona/software/gffread/Singularity.gffread_0.12.1 -> build/bdist.linux-armv7l/wheel/damona/software/gffread
2023-02-22T18:11:08,662   creating build/bdist.linux-armv7l/wheel/damona/software/kraken
2023-02-22T18:11:08,664   copying build/lib/damona/software/kraken/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/kraken
2023-02-22T18:11:08,668   copying build/lib/damona/software/kraken/Singularity.kraken_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/kraken
2023-02-22T18:11:08,672   copying build/lib/damona/software/kraken/Singularity.kraken_2.0.9 -> build/bdist.linux-armv7l/wheel/damona/software/kraken
2023-02-22T18:11:08,677   creating build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools
2023-02-22T18:11:08,678   copying build/lib/damona/software/phantompeakqualtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools
2023-02-22T18:11:08,683   copying build/lib/damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools
2023-02-22T18:11:08,688   creating build/bdist.linux-armv7l/wheel/damona/papers
2023-02-22T18:11:08,689   copying build/lib/damona/papers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/papers
2023-02-22T18:11:08,693   copying build/lib/damona/environ.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,698   copying build/lib/damona/registry.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,702   copying build/lib/damona/builders.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,708   creating build/bdist.linux-armv7l/wheel/damona/biocontainers
2023-02-22T18:11:08,710   copying build/lib/damona/biocontainers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/biocontainers
2023-02-22T18:11:08,713   copying build/lib/damona/biocontainers/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/biocontainers
2023-02-22T18:11:08,902   copying build/lib/damona/admin.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,907   copying build/lib/damona/script.py -> build/bdist.linux-armv7l/wheel/damona
2023-02-22T18:11:08,911   running install_egg_info
2023-02-22T18:11:09,016   running egg_info
2023-02-22T18:11:09,067   writing damona.egg-info/PKG-INFO
2023-02-22T18:11:09,072   writing dependency_links to damona.egg-info/dependency_links.txt
2023-02-22T18:11:09,076   writing entry points to damona.egg-info/entry_points.txt
2023-02-22T18:11:09,079   writing requirements to damona.egg-info/requires.txt
2023-02-22T18:11:09,081   writing top-level names to damona.egg-info/top_level.txt
2023-02-22T18:11:09,207   reading manifest file 'damona.egg-info/SOURCES.txt'
2023-02-22T18:11:09,220   reading manifest template 'MANIFEST.in'
2023-02-22T18:11:09,223   warning: no previously-included files matching '__pycache__' found under directory '*'
2023-02-22T18:11:09,226   warning: no previously-included files matching '*pyc' found under directory '*'
2023-02-22T18:11:09,229   warning: no previously-included files matching 'test' found under directory '*'
2023-02-22T18:11:09,232   warning: no files found matching '.requirements_dev.txt'
2023-02-22T18:11:09,234   warning: no files found matching 'damona/shell/*.sh'
2023-02-22T18:11:09,235   no previously-included directories found matching 'test'
2023-02-22T18:11:09,237   no previously-included directories found matching 'doc'
2023-02-22T18:11:09,237   adding license file 'LICENSE'
2023-02-22T18:11:09,259   writing manifest file 'damona.egg-info/SOURCES.txt'
2023-02-22T18:11:09,263   Copying damona.egg-info to build/bdist.linux-armv7l/wheel/damona-0.8.2-py3.7.egg-info
2023-02-22T18:11:09,291   running install_scripts
2023-02-22T18:11:09,355   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2023-02-22T18:11:09,364   creating build/bdist.linux-armv7l/wheel/damona-0.8.2.dist-info/WHEEL
2023-02-22T18:11:09,370   creating '/tmp/pip-wheel-1c876e87/damona-0.8.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-02-22T18:11:09,376   adding 'damona/__init__.py'
2023-02-22T18:11:09,380   adding 'damona/admin.py'
2023-02-22T18:11:09,384   adding 'damona/builders.py'
2023-02-22T18:11:09,390   adding 'damona/common.py'
2023-02-22T18:11:09,394   adding 'damona/config.py'
2023-02-22T18:11:09,400   adding 'damona/environ.py'
2023-02-22T18:11:09,408   adding 'damona/install.py'
2023-02-22T18:11:09,416   adding 'damona/registry.py'
2023-02-22T18:11:09,425   adding 'damona/script.py'
2023-02-22T18:11:09,431   adding 'damona/zenodo.py'
2023-02-22T18:11:09,435   adding 'damona/biocontainers/__init__.py'
2023-02-22T18:11:10,031   adding 'damona/biocontainers/registry.yaml'
2023-02-22T18:11:10,111   adding 'damona/library/__init__.py'
2023-02-22T18:11:10,116   adding 'damona/library/R/Singularity.R_3.6.3'
2023-02-22T18:11:10,120   adding 'damona/library/R/Singularity.R_4.0.2'
2023-02-22T18:11:10,123   adding 'damona/library/R/registry.yaml'
2023-02-22T18:11:10,127   adding 'damona/library/conda/Singularity.conda_4.7.12'
2023-02-22T18:11:10,131   adding 'damona/library/conda/Singularity.conda_4.9.2'
2023-02-22T18:11:10,134   adding 'damona/library/conda/registry.yaml'
2023-02-22T18:11:10,138   adding 'damona/papers/__init__.py'
2023-02-22T18:11:10,142   adding 'damona/shell/__init__.py'
2023-02-22T18:11:10,146   adding 'damona/shell/bash/__init__.py'
2023-02-22T18:11:10,150   adding 'damona/shell/bash/damona.sh'
2023-02-22T18:11:10,155   adding 'damona/shell/fish/damona.fish'
2023-02-22T18:11:10,161   adding 'damona/software/__init__.py'
2023-02-22T18:11:10,165   adding 'damona/software/art/Singularity.art_2.5.8'
2023-02-22T18:11:10,168   adding 'damona/software/art/Singularity.art_3.11.14'
2023-02-22T18:11:10,171   adding 'damona/software/art/registry.yaml'
2023-02-22T18:11:10,176   adding 'damona/software/bamtools/Singularity.bamtools_2.5.2'
2023-02-22T18:11:10,179   adding 'damona/software/bamtools/registry.yaml'
2023-02-22T18:11:10,183   adding 'damona/software/bbtools/Singularity.bbtools_38.94.0'
2023-02-22T18:11:10,187   adding 'damona/software/bbtools/registry.yaml'
2023-02-22T18:11:10,191   adding 'damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0'
2023-02-22T18:11:10,194   adding 'damona/software/bcl2fastq/registry.yaml'
2023-02-22T18:11:10,199   adding 'damona/software/bedtools/Singularity.bedtools_2.30.0'
2023-02-22T18:11:10,202   adding 'damona/software/bedtools/registry.yaml'
2023-02-22T18:11:10,207   adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.1'
2023-02-22T18:11:10,210   adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.2'
2023-02-22T18:11:10,214   adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.3'
2023-02-22T18:11:10,217   adding 'damona/software/bioconvert/registry.yaml'
2023-02-22T18:11:10,221   adding 'damona/software/bowtie/Singularity.bowtie_1.3.1'
2023-02-22T18:11:10,224   adding 'damona/software/bowtie/registry.yaml'
2023-02-22T18:11:10,229   adding 'damona/software/bowtie2/Singularity.bowtie2_2.3.4'
2023-02-22T18:11:10,232   adding 'damona/software/bowtie2/Singularity.bowtie2_2.4.2'
2023-02-22T18:11:10,235   adding 'damona/software/bowtie2/registry.yaml'
2023-02-22T18:11:10,239   adding 'damona/software/canu/Singularity.canu_1.6.0'
2023-02-22T18:11:10,242   adding 'damona/software/canu/Singularity.canu_1.8.0'
2023-02-22T18:11:10,245   adding 'damona/software/canu/registry.yaml'
2023-02-22T18:11:10,250   adding 'damona/software/falco/Singularity.falco_0.2.1'
2023-02-22T18:11:10,253   adding 'damona/software/falco/Singularity.falco_1.0.0'
2023-02-22T18:11:10,256   adding 'damona/software/falco/registry.yaml'
2023-02-22T18:11:10,260   adding 'damona/software/fastp/Singularity.fastp_0.23.2'
2023-02-22T18:11:10,263   adding 'damona/software/fastp/registry.yaml'
2023-02-22T18:11:10,267   adding 'damona/software/fastqc/Singularity.fastqc_0.11.8'
2023-02-22T18:11:10,270   adding 'damona/software/fastqc/Singularity.fastqc_0.11.9'
2023-02-22T18:11:10,273   adding 'damona/software/fastqc/Singularity.fastqc_0.11.9_py3'
2023-02-22T18:11:10,277   adding 'damona/software/fastqc/registry.yaml'
2023-02-22T18:11:10,281   adding 'damona/software/flye/Singularity.flye_2.9.0'
2023-02-22T18:11:10,284   adding 'damona/software/flye/registry.yaml'
2023-02-22T18:11:10,288   adding 'damona/software/gffread/Singularity.gffread_0.12.1'
2023-02-22T18:11:10,291   adding 'damona/software/gffread/registry.yaml'
2023-02-22T18:11:10,295   adding 'damona/software/graphviz/Singularity.graphviz_2.43.0'
2023-02-22T18:11:10,298   adding 'damona/software/graphviz/registry.yaml'
2023-02-22T18:11:10,302   adding 'damona/software/gzip/Singularity.gzip_1.9.0'
2023-02-22T18:11:10,305   adding 'damona/software/gzip/registry.yaml'
2023-02-22T18:11:10,309   adding 'damona/software/hisat2/registry.yaml'
2023-02-22T18:11:10,313   adding 'damona/software/homer/Singularity.homer_4.11.0'
2023-02-22T18:11:10,317   adding 'damona/software/homer/registry.yaml'
2023-02-22T18:11:10,321   adding 'damona/software/idr/Singularity.idr_2.0.3'
2023-02-22T18:11:10,324   adding 'damona/software/idr/registry.yaml'
2023-02-22T18:11:10,328   adding 'damona/software/igvtools/Singularity.igvtools_2.12.0'
2023-02-22T18:11:10,331   adding 'damona/software/igvtools/registry.yaml'
2023-02-22T18:11:10,335   adding 'damona/software/kraken/Singularity.kraken_1.1.0'
2023-02-22T18:11:10,339   adding 'damona/software/kraken/Singularity.kraken_2.0.9'
2023-02-22T18:11:10,342   adding 'damona/software/kraken/registry.yaml'
2023-02-22T18:11:10,346   adding 'damona/software/minimap2/Singularity.minimap2_2.17.0'
2023-02-22T18:11:10,349   adding 'damona/software/minimap2/Singularity.minimap2_2.23.0'
2023-02-22T18:11:10,352   adding 'damona/software/minimap2/registry.yaml'
2023-02-22T18:11:10,356   adding 'damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2'
2023-02-22T18:11:10,359   adding 'damona/software/phantompeakqualtools/registry.yaml'
2023-02-22T18:11:10,363   adding 'damona/software/pigz/Singularity.pigz_2.4.0'
2023-02-22T18:11:10,366   adding 'damona/software/pigz/registry.yaml'
2023-02-22T18:11:10,370   adding 'damona/software/prokka/Singularity.prokka_1.14.5'
2023-02-22T18:11:10,372   adding 'damona/software/prokka/registry.yaml'
2023-02-22T18:11:10,376   adding 'damona/software/quast/Singularity.quast_5.0.2'
2023-02-22T18:11:10,378   adding 'damona/software/quast/registry.yaml'
2023-02-22T18:11:10,381   adding 'damona/software/rnadiff/Singularity.rnadiff_1.7.1'
2023-02-22T18:11:10,384   adding 'damona/software/rnadiff/registry.yaml'
2023-02-22T18:11:10,387   adding 'damona/software/rnaseqc/Singularity.rnaseqc_2.35.0'
2023-02-22T18:11:10,389   adding 'damona/software/rnaseqc/registry.yaml'
2023-02-22T18:11:10,393   adding 'damona/software/rtools/Singularity.rtools_1.0.0'
2023-02-22T18:11:10,395   adding 'damona/software/rtools/Singularity.rtools_1.1.0'
2023-02-22T18:11:10,398   adding 'damona/software/rtools/Singularity.rtools_1.2.0'
2023-02-22T18:11:10,400   adding 'damona/software/rtools/registry.yaml'
2023-02-22T18:11:10,404   adding 'damona/software/salmon/Singularity.salmon_1.3.0'
2023-02-22T18:11:10,406   adding 'damona/software/salmon/registry.yaml'
2023-02-22T18:11:10,410   adding 'damona/software/samtools/Singularity.samtools_1.15.0'
2023-02-22T18:11:10,412   adding 'damona/software/samtools/registry.yaml'
2023-02-22T18:11:10,416   adding 'damona/software/seqkit/Singularity.seqkit_2.1.0'
2023-02-22T18:11:10,418   adding 'damona/software/seqkit/registry.yaml'
2023-02-22T18:11:10,422   adding 'damona/software/seqtk/Singularity.seqtk_1.3.0'
2023-02-22T18:11:10,424   adding 'damona/software/seqtk/registry.yaml'
2023-02-22T18:11:10,428   adding 'damona/software/sequana/Singularity.sequana_0.12.6'
2023-02-22T18:11:10,430   adding 'damona/software/sequana/registry.yaml'
2023-02-22T18:11:10,434   adding 'damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2'
2023-02-22T18:11:10,437   adding 'damona/software/sequana_denovo/registry.yaml'
2023-02-22T18:11:10,440   adding 'damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0'
2023-02-22T18:11:10,443   adding 'damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0'
2023-02-22T18:11:10,445   adding 'damona/software/sequana_perl_tools/registry.yaml'
2023-02-22T18:11:10,449   adding 'damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0'
2023-02-22T18:11:10,451   adding 'damona/software/sequana_ribofinder/registry.yaml'
2023-02-22T18:11:10,455   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.10.0'
2023-02-22T18:11:10,458   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.11.0'
2023-02-22T18:11:10,461   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.12.0'
2023-02-22T18:11:10,464   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.1'
2023-02-22T18:11:10,467   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.2'
2023-02-22T18:11:10,469   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.3'
2023-02-22T18:11:10,471   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.5'
2023-02-22T18:11:10,474   adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.9.0'
2023-02-22T18:11:10,477   adding 'damona/software/sequana_tools/registry.yaml'
2023-02-22T18:11:10,480   adding 'damona/software/shustring/Singularity.shustring_2.6.0'
2023-02-22T18:11:10,483   adding 'damona/software/shustring/registry.yaml'
2023-02-22T18:11:10,487   adding 'damona/software/snpeff/Singularity.snpeff_5.1.0'
2023-02-22T18:11:10,490   adding 'damona/software/trf/Singularity.trf_4.10.0'
2023-02-22T18:11:10,492   adding 'damona/software/trf/registry.yaml'
2023-02-22T18:11:10,496   adding 'damona/software/ucsc/Singularity.ucsc_3.7.7'
2023-02-22T18:11:10,498   adding 'damona/software/ucsc/registry.yaml'
2023-02-22T18:11:10,503   adding 'damona-0.8.2.dist-info/LICENSE'
2023-02-22T18:11:10,509   adding 'damona-0.8.2.dist-info/METADATA'
2023-02-22T18:11:10,511   adding 'damona-0.8.2.dist-info/WHEEL'
2023-02-22T18:11:10,513   adding 'damona-0.8.2.dist-info/entry_points.txt'
2023-02-22T18:11:10,515   adding 'damona-0.8.2.dist-info/top_level.txt'
2023-02-22T18:11:10,519   adding 'damona-0.8.2.dist-info/RECORD'
2023-02-22T18:11:10,543   removing build/bdist.linux-armv7l/wheel
2023-02-22T18:11:10,811   Building wheel for damona (setup.py): finished with status 'done'
2023-02-22T18:11:10,833   Created wheel for damona: filename=damona-0.8.2-py3-none-any.whl size=500600 sha256=cb1d248f7ca0e043cca2bb9abbe636b6dfc45f4c9dee9ab49505e014ab23cd84
2023-02-22T18:11:10,835   Stored in directory: /tmp/pip-ephem-wheel-cache-cwlmklc5/wheels/e2/99/73/5efcc9ba757aacbd5b5627c03f5d212cbfc43d9cc924e44a51
2023-02-22T18:11:10,878 Successfully built damona
2023-02-22T18:11:10,928 Removed build tracker: '/tmp/pip-build-tracker-1__cbgfg'