2023-02-22T18:13:45,114 Created temporary directory: /tmp/pip-ephem-wheel-cache-vn1hfbvp 2023-02-22T18:13:45,119 Created temporary directory: /tmp/pip-build-tracker-_whk1mzx 2023-02-22T18:13:45,120 Initialized build tracking at /tmp/pip-build-tracker-_whk1mzx 2023-02-22T18:13:45,120 Created build tracker: /tmp/pip-build-tracker-_whk1mzx 2023-02-22T18:13:45,121 Entered build tracker: /tmp/pip-build-tracker-_whk1mzx 2023-02-22T18:13:45,122 Created temporary directory: /tmp/pip-wheel-elyuhjrn 2023-02-22T18:13:45,132 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-22T18:13:45,137 Created temporary directory: /tmp/pip-ephem-wheel-cache-y2slt4tj 2023-02-22T18:13:45,190 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-22T18:13:45,197 2 location(s) to search for versions of massiveqc: 2023-02-22T18:13:45,197 * https://pypi.org/simple/massiveqc/ 2023-02-22T18:13:45,197 * https://www.piwheels.org/simple/massiveqc/ 2023-02-22T18:13:45,198 Fetching project page and analyzing links: https://pypi.org/simple/massiveqc/ 2023-02-22T18:13:45,199 Getting page https://pypi.org/simple/massiveqc/ 2023-02-22T18:13:45,203 Found index url https://pypi.org/simple 2023-02-22T18:13:45,385 Fetched page https://pypi.org/simple/massiveqc/ as application/vnd.pypi.simple.v1+json 2023-02-22T18:13:45,392 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/41/29/5dc459a0b9f4649cadeff72f4d0b87baa9c467539ab7f18be15c5deb8452/MassiveQC-0.0.6-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,394 Found link https://files.pythonhosted.org/packages/1a/df/f44e8ada6aea50dccd18080805ff38a7a9a7a10f717c5cf87192933a5d4f/MassiveQC-0.0.6.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.6 2023-02-22T18:13:45,395 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/0b/a3/f436dffc017a0eadb8a69bea88131d095ebee6a8d3ecf996e029296f060e/MassiveQC-0.0.7-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,396 Found link https://files.pythonhosted.org/packages/0d/dd/eb7adee6c242a2b87772d63390da2c5abee906f6e092e6611e72d19c9163/MassiveQC-0.0.7.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.7 2023-02-22T18:13:45,397 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/8c/c5/8c8349e28ba7c2db3cb509e1f215544536573d2753ba7659542bccc34810/MassiveQC-0.0.8-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,398 Found link https://files.pythonhosted.org/packages/56/2b/53c0888bc71080458ae42e6f03aab1142fad35ac96de14a609f25ac80ce6/MassiveQC-0.0.8.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.8 2023-02-22T18:13:45,399 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/57/9f/37f50a1e73cb7ad3a7b5cebd5a2dbe05ff8b00ead3071ea28e2d09868ce3/MassiveQC-0.0.9-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,400 Found link https://files.pythonhosted.org/packages/ef/a1/02887357d6474fab29ece4e7302d799d4655c3bdf21e4632bf756342f6cd/MassiveQC-0.0.9.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.9 2023-02-22T18:13:45,401 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/77/5a/e7cc08e9bb9e951ff162a3d2097e1cbcccab6b460fa3b9f1f3bccccff42c/MassiveQC-0.1.0-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,402 Found link https://files.pythonhosted.org/packages/f8/46/03372fb3214a576139b5d504682735bdd6ed692c92c1f6e5dea4e8a267d5/MassiveQC-0.1.0.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.1.0 2023-02-22T18:13:45,403 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/df/f1/bb6a3038c7e50359182f1972b9715dc7c977a8088f3def454bc9b37fc9e8/MassiveQC-0.1.1-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,404 Found link https://files.pythonhosted.org/packages/3f/b8/5df54d7766874d91f648d5530e671414231c7717391a66d0378926085754/MassiveQC-0.1.1.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.1.1 2023-02-22T18:13:45,405 Fetching project page and analyzing links: https://www.piwheels.org/simple/massiveqc/ 2023-02-22T18:13:45,406 Getting page https://www.piwheels.org/simple/massiveqc/ 2023-02-22T18:13:45,408 Found index url https://www.piwheels.org/simple 2023-02-22T18:13:45,676 Fetched page https://www.piwheels.org/simple/massiveqc/ as text/html 2023-02-22T18:13:45,682 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.1.0-py3-none-any.whl#sha256=0be64faa90763adf1339b59535c3f2732d73b84d9035ae77721a5e345e610fa0 (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,682 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.9-py3-none-any.whl#sha256=02a9190fb73487659c09b1e57418b41ef0ab7da12ac926c08a05553db938cfcf (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,683 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.8-py3-none-any.whl#sha256=f5e6157ef06ce164eaa283c649f908e3eefd8e5faaedee8c0e03b5f1ae9700c1 (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,683 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.7-py3-none-any.whl#sha256=097486ad59837713d513d5d39d31d897541c7311c1f5ee411a3580441817d560 (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,684 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.6-py3-none-any.whl#sha256=d88d6fcaf7fd2918a7d2fad1a72a2c2dabc1d61119bcc592f8738b72c47e35d5 (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2023-02-22T18:13:45,684 Skipping link: not a file: https://www.piwheels.org/simple/massiveqc/ 2023-02-22T18:13:45,685 Skipping link: not a file: https://pypi.org/simple/massiveqc/ 2023-02-22T18:13:45,719 Given no hashes to check 1 links for project 'massiveqc': discarding no candidates 2023-02-22T18:13:45,749 Collecting massiveqc==0.1.1 2023-02-22T18:13:45,754 Created temporary directory: /tmp/pip-unpack-vdygqw6b 2023-02-22T18:13:45,992 Downloading MassiveQC-0.1.1.tar.gz (25 kB) 2023-02-22T18:13:46,144 Added massiveqc==0.1.1 from https://files.pythonhosted.org/packages/3f/b8/5df54d7766874d91f648d5530e671414231c7717391a66d0378926085754/MassiveQC-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-_whk1mzx' 2023-02-22T18:13:46,147 Running setup.py (path:/tmp/pip-wheel-elyuhjrn/massiveqc_c7a02f1e48ce4f31879db8f76ae0604b/setup.py) egg_info for package massiveqc 2023-02-22T18:13:46,148 Created temporary directory: /tmp/pip-pip-egg-info-yg4bdmq0 2023-02-22T18:13:46,149 Preparing metadata (setup.py): started 2023-02-22T18:13:46,151 Running command python setup.py egg_info 2023-02-22T18:13:47,587 running egg_info 2023-02-22T18:13:47,589 creating /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info 2023-02-22T18:13:47,639 writing /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/PKG-INFO 2023-02-22T18:13:47,644 writing dependency_links to /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/dependency_links.txt 2023-02-22T18:13:47,648 writing entry points to /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/entry_points.txt 2023-02-22T18:13:47,651 writing requirements to /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/requires.txt 2023-02-22T18:13:47,653 writing top-level names to /tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/top_level.txt 2023-02-22T18:13:47,656 writing manifest file '/tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/SOURCES.txt' 2023-02-22T18:13:47,816 reading manifest file '/tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/SOURCES.txt' 2023-02-22T18:13:47,825 writing manifest file '/tmp/pip-pip-egg-info-yg4bdmq0/MassiveQC.egg-info/SOURCES.txt' 2023-02-22T18:13:47,942 Preparing metadata (setup.py): finished with status 'done' 2023-02-22T18:13:47,955 Source in /tmp/pip-wheel-elyuhjrn/massiveqc_c7a02f1e48ce4f31879db8f76ae0604b has version 0.1.1, which satisfies requirement massiveqc==0.1.1 from https://files.pythonhosted.org/packages/3f/b8/5df54d7766874d91f648d5530e671414231c7717391a66d0378926085754/MassiveQC-0.1.1.tar.gz 2023-02-22T18:13:47,957 Removed massiveqc==0.1.1 from https://files.pythonhosted.org/packages/3f/b8/5df54d7766874d91f648d5530e671414231c7717391a66d0378926085754/MassiveQC-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-_whk1mzx' 2023-02-22T18:13:47,972 Created temporary directory: /tmp/pip-unpack-i2xxff_c 2023-02-22T18:13:47,973 Building wheels for collected packages: massiveqc 2023-02-22T18:13:47,983 Created temporary directory: /tmp/pip-wheel-pr4sdx3i 2023-02-22T18:13:47,984 Building wheel for massiveqc (setup.py): started 2023-02-22T18:13:47,986 Destination directory: /tmp/pip-wheel-pr4sdx3i 2023-02-22T18:13:47,986 Running command python setup.py bdist_wheel 2023-02-22T18:13:49,881 running bdist_wheel 2023-02-22T18:13:50,038 running build 2023-02-22T18:13:50,039 running build_py 2023-02-22T18:13:50,098 creating build 2023-02-22T18:13:50,100 creating build/lib 2023-02-22T18:13:50,102 creating build/lib/MassiveQC 2023-02-22T18:13:50,105 copying MassiveQC/fastq_screen.py -> build/lib/MassiveQC 2023-02-22T18:13:50,110 copying MassiveQC/markduplicates.py -> build/lib/MassiveQC 2023-02-22T18:13:50,115 copying MassiveQC/MultiProcess.py -> build/lib/MassiveQC 2023-02-22T18:13:50,119 copying MassiveQC/hisat2.py -> build/lib/MassiveQC 2023-02-22T18:13:50,123 copying MassiveQC/collectrnaseqmetrics.py -> build/lib/MassiveQC 2023-02-22T18:13:50,127 copying MassiveQC/detection.py -> build/lib/MassiveQC 2023-02-22T18:13:50,131 copying MassiveQC/fastq.py -> build/lib/MassiveQC 2023-02-22T18:13:50,135 copying MassiveQC/IsoDetect.py -> build/lib/MassiveQC 2023-02-22T18:13:50,138 copying MassiveQC/atropos.py -> build/lib/MassiveQC 2023-02-22T18:13:50,142 copying MassiveQC/get_sra.py -> build/lib/MassiveQC 2023-02-22T18:13:50,147 copying MassiveQC/command.py -> build/lib/MassiveQC 2023-02-22T18:13:50,150 copying MassiveQC/plot.py -> build/lib/MassiveQC 2023-02-22T18:13:50,153 copying MassiveQC/__init__.py -> build/lib/MassiveQC 2023-02-22T18:13:50,156 copying MassiveQC/SingleProcess.py -> build/lib/MassiveQC 2023-02-22T18:13:50,160 copying MassiveQC/parser.py -> build/lib/MassiveQC 2023-02-22T18:13:50,165 copying MassiveQC/build_features.py -> build/lib/MassiveQC 2023-02-22T18:13:50,169 copying MassiveQC/FeatureCounts.py -> build/lib/MassiveQC 2023-02-22T18:13:50,172 copying MassiveQC/check_fq.py -> build/lib/MassiveQC 2023-02-22T18:13:50,176 copying MassiveQC/feature_store.py -> build/lib/MassiveQC 2023-02-22T18:13:50,180 copying MassiveQC/iforest.py -> build/lib/MassiveQC 2023-02-22T18:13:50,249 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-02-22T18:13:50,249 setuptools.SetuptoolsDeprecationWarning, 2023-02-22T18:13:50,302 installing to build/bdist.linux-armv7l/wheel 2023-02-22T18:13:50,303 running install 2023-02-22T18:13:50,363 running install_lib 2023-02-22T18:13:50,417 creating build/bdist.linux-armv7l 2023-02-22T18:13:50,418 creating build/bdist.linux-armv7l/wheel 2023-02-22T18:13:50,422 creating build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,424 copying build/lib/MassiveQC/fastq_screen.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,429 copying build/lib/MassiveQC/markduplicates.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,433 copying build/lib/MassiveQC/MultiProcess.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,437 copying build/lib/MassiveQC/hisat2.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,441 copying build/lib/MassiveQC/collectrnaseqmetrics.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,446 copying build/lib/MassiveQC/detection.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,449 copying build/lib/MassiveQC/fastq.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,454 copying build/lib/MassiveQC/IsoDetect.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,458 copying build/lib/MassiveQC/atropos.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,462 copying build/lib/MassiveQC/get_sra.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,466 copying build/lib/MassiveQC/command.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,469 copying build/lib/MassiveQC/plot.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,473 copying build/lib/MassiveQC/__init__.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,475 copying build/lib/MassiveQC/SingleProcess.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,480 copying build/lib/MassiveQC/parser.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,484 copying build/lib/MassiveQC/build_features.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,488 copying build/lib/MassiveQC/FeatureCounts.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,492 copying build/lib/MassiveQC/check_fq.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,496 copying build/lib/MassiveQC/feature_store.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,499 copying build/lib/MassiveQC/iforest.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2023-02-22T18:13:50,503 running install_egg_info 2023-02-22T18:13:50,633 running egg_info 2023-02-22T18:13:50,686 writing MassiveQC.egg-info/PKG-INFO 2023-02-22T18:13:50,690 writing dependency_links to MassiveQC.egg-info/dependency_links.txt 2023-02-22T18:13:50,694 writing entry points to MassiveQC.egg-info/entry_points.txt 2023-02-22T18:13:50,697 writing requirements to MassiveQC.egg-info/requires.txt 2023-02-22T18:13:50,699 writing top-level names to MassiveQC.egg-info/top_level.txt 2023-02-22T18:13:50,756 reading manifest file 'MassiveQC.egg-info/SOURCES.txt' 2023-02-22T18:13:50,768 writing manifest file 'MassiveQC.egg-info/SOURCES.txt' 2023-02-22T18:13:50,771 Copying MassiveQC.egg-info to build/bdist.linux-armv7l/wheel/MassiveQC-0.1.1-py3.7.egg-info 2023-02-22T18:13:50,793 running install_scripts 2023-02-22T18:13:50,837 creating build/bdist.linux-armv7l/wheel/MassiveQC-0.1.1.dist-info/WHEEL 2023-02-22T18:13:50,842 creating '/tmp/pip-wheel-pr4sdx3i/MassiveQC-0.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-22T18:13:50,848 adding 'MassiveQC/FeatureCounts.py' 2023-02-22T18:13:50,851 adding 'MassiveQC/IsoDetect.py' 2023-02-22T18:13:50,855 adding 'MassiveQC/MultiProcess.py' 2023-02-22T18:13:50,859 adding 'MassiveQC/SingleProcess.py' 2023-02-22T18:13:50,862 adding 'MassiveQC/__init__.py' 2023-02-22T18:13:50,865 adding 'MassiveQC/atropos.py' 2023-02-22T18:13:50,869 adding 'MassiveQC/build_features.py' 2023-02-22T18:13:50,872 adding 'MassiveQC/check_fq.py' 2023-02-22T18:13:50,875 adding 'MassiveQC/collectrnaseqmetrics.py' 2023-02-22T18:13:50,878 adding 'MassiveQC/command.py' 2023-02-22T18:13:50,880 adding 'MassiveQC/detection.py' 2023-02-22T18:13:50,885 adding 'MassiveQC/fastq.py' 2023-02-22T18:13:50,888 adding 'MassiveQC/fastq_screen.py' 2023-02-22T18:13:50,891 adding 'MassiveQC/feature_store.py' 2023-02-22T18:13:50,895 adding 'MassiveQC/get_sra.py' 2023-02-22T18:13:50,898 adding 'MassiveQC/hisat2.py' 2023-02-22T18:13:50,902 adding 'MassiveQC/iforest.py' 2023-02-22T18:13:50,905 adding 'MassiveQC/markduplicates.py' 2023-02-22T18:13:50,908 adding 'MassiveQC/parser.py' 2023-02-22T18:13:50,911 adding 'MassiveQC/plot.py' 2023-02-22T18:13:50,916 adding 'MassiveQC-0.1.1.dist-info/METADATA' 2023-02-22T18:13:50,918 adding 'MassiveQC-0.1.1.dist-info/WHEEL' 2023-02-22T18:13:50,920 adding 'MassiveQC-0.1.1.dist-info/entry_points.txt' 2023-02-22T18:13:50,922 adding 'MassiveQC-0.1.1.dist-info/top_level.txt' 2023-02-22T18:13:50,923 adding 'MassiveQC-0.1.1.dist-info/RECORD' 2023-02-22T18:13:50,927 removing build/bdist.linux-armv7l/wheel 2023-02-22T18:13:51,086 Building wheel for massiveqc (setup.py): finished with status 'done' 2023-02-22T18:13:51,094 Created wheel for massiveqc: filename=MassiveQC-0.1.1-py3-none-any.whl size=34711 sha256=573c7e798cb2538cfa4db45f71e77fb6270ae13bc3d34414a6d2ccc538988a3f 2023-02-22T18:13:51,097 Stored in directory: /tmp/pip-ephem-wheel-cache-y2slt4tj/wheels/d6/94/9f/3116fef95477fa1f441facc19193b0d4ea1989867d066a0b4d 2023-02-22T18:13:51,122 Successfully built massiveqc 2023-02-22T18:13:51,131 Removed build tracker: '/tmp/pip-build-tracker-_whk1mzx'