2023-02-22T22:16:43,840 Created temporary directory: /tmp/pip-ephem-wheel-cache-ri8tyj_7 2023-02-22T22:16:43,846 Created temporary directory: /tmp/pip-build-tracker-oyzdxpgc 2023-02-22T22:16:43,847 Initialized build tracking at /tmp/pip-build-tracker-oyzdxpgc 2023-02-22T22:16:43,847 Created build tracker: /tmp/pip-build-tracker-oyzdxpgc 2023-02-22T22:16:43,848 Entered build tracker: /tmp/pip-build-tracker-oyzdxpgc 2023-02-22T22:16:43,849 Created temporary directory: /tmp/pip-wheel-4c9pl8k4 2023-02-22T22:16:43,861 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-22T22:16:43,869 Created temporary directory: /tmp/pip-ephem-wheel-cache-gcwexpqd 2023-02-22T22:16:43,928 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-22T22:16:43,935 2 location(s) to search for versions of singlecellexperiment: 2023-02-22T22:16:43,935 * https://pypi.org/simple/singlecellexperiment/ 2023-02-22T22:16:43,935 * https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-22T22:16:43,936 Fetching project page and analyzing links: https://pypi.org/simple/singlecellexperiment/ 2023-02-22T22:16:43,937 Getting page https://pypi.org/simple/singlecellexperiment/ 2023-02-22T22:16:43,941 Found index url https://pypi.org/simple 2023-02-22T22:16:44,127 Fetched page https://pypi.org/simple/singlecellexperiment/ as application/vnd.pypi.simple.v1+json 2023-02-22T22:16:44,133 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/06/22/dc7ff7a9cbb849320db55483824aa238639983004a3384e3cbb56fe1b55c/SingleCellExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,134 Found link https://files.pythonhosted.org/packages/4f/c7/2f87f03dc0a39652929e596b999610770d5a2ad3c98c9d4eda99ac6ad1fc/SingleCellExperiment-0.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.1 2023-02-22T22:16:44,135 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/12/17/fdf09ec58f3668dedd84dd72d7f33e9a39b92641c71419a31ba4b11fd93f/SingleCellExperiment-0.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,135 Found link https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2 2023-02-22T22:16:44,136 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/39/57/e51f288c79b8ceab3e3256bf280bea555114a5f69043fcd3079c61bc0c3a/SingleCellExperiment-0.2.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,137 Found link https://files.pythonhosted.org/packages/e6/16/21b02cd4340a21322d8f0393955aa35b917e5a3771293b7754897e44d7dd/SingleCellExperiment-0.2.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.1 2023-02-22T22:16:44,137 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/db/ba/9e1dc2767aa10eb42ccfd538a2f3f5a4e6fa6e50abda9df14e142606c1ce/SingleCellExperiment-0.2.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,138 Found link https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.2 2023-02-22T22:16:44,139 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/c7/95/91f1348839c55d478f9bd55165dbe3a80b33542a66a6c2d060bf30dd39b8/SingleCellExperiment-0.2.3-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,139 Found link https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.3 2023-02-22T22:16:44,140 Fetching project page and analyzing links: https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-22T22:16:44,141 Getting page https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-22T22:16:44,143 Found index url https://www.piwheels.org/simple 2023-02-22T22:16:44,365 Fetched page https://www.piwheels.org/simple/singlecellexperiment/ as text/html 2023-02-22T22:16:44,370 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.2-py3-none-any.whl#sha256=bebfd5697c376b98a2cd4ccf7a10b257390d8711dd7b46cde48f2550545bf09e (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,370 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.1-py3-none-any.whl#sha256=79346b13d2b934a5e3ea35c048ac23d7cf2655855f8b490272d0861daf232df9 (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,371 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2-py3-none-any.whl#sha256=a65a3769c1131ce8b3960c77dfebb0d0a4684a3c6e27ee1b7f5b3a6412615ffb (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,371 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.1-py3-none-any.whl#sha256=3f769bcfff226d0998e8ad6fb4dff2e44710993eb3067a315d50b3031efb1e4f (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-22T22:16:44,372 Skipping link: not a file: https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-22T22:16:44,372 Skipping link: not a file: https://pypi.org/simple/singlecellexperiment/ 2023-02-22T22:16:44,411 Given no hashes to check 1 links for project 'singlecellexperiment': discarding no candidates 2023-02-22T22:16:44,440 Collecting singlecellexperiment==0.2.3 2023-02-22T22:16:44,445 Created temporary directory: /tmp/pip-unpack-oa56l9al 2023-02-22T22:16:44,703 Downloading SingleCellExperiment-0.2.3.tar.gz (1.1 MB) 2023-02-22T22:16:45,280 Added singlecellexperiment==0.2.3 from https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz to build tracker '/tmp/pip-build-tracker-oyzdxpgc' 2023-02-22T22:16:45,294 Created temporary directory: /tmp/pip-build-env-kwy625ad 2023-02-22T22:16:45,313 Installing build dependencies: started 2023-02-22T22:16:45,315 Running command pip subprocess to install build dependencies 2023-02-22T22:16:48,032 Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-02-22T22:16:49,239 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-22T22:16:49,300 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-22T22:16:53,223 Collecting setuptools>=46.1.0 2023-02-22T22:16:53,470 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB) 2023-02-22T22:16:54,353 Collecting setuptools_scm[toml]>=5 2023-02-22T22:16:54,387 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-02-22T22:16:54,911 Collecting wheel 2023-02-22T22:16:54,943 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-02-22T22:16:55,439 Collecting packaging>=20.0 2023-02-22T22:16:55,473 Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB) 2023-02-22T22:16:55,700 Collecting typing-extensions 2023-02-22T22:16:55,733 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.5.0-py3-none-any.whl (27 kB) 2023-02-22T22:16:56,654 Collecting importlib-metadata 2023-02-22T22:16:56,688 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.0.0-py3-none-any.whl (21 kB) 2023-02-22T22:16:56,946 Collecting tomli>=1.0.0 2023-02-22T22:16:56,978 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-02-22T22:16:58,671 Collecting zipp>=0.5 2023-02-22T22:16:58,703 Using cached https://www.piwheels.org/simple/zipp/zipp-3.14.0-py3-none-any.whl (6.7 kB) 2023-02-22T22:17:03,879 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2023-02-22T22:17:04,226 Creating /tmp/pip-build-env-kwy625ad/overlay/bin 2023-02-22T22:17:04,231 changing mode of /tmp/pip-build-env-kwy625ad/overlay/bin/wheel to 755 2023-02-22T22:17:09,375 Successfully installed importlib-metadata-6.0.0 packaging-23.0 setuptools-67.4.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.5.0 wheel-0.38.4 zipp-3.14.0 2023-02-22T22:17:10,374 Installing build dependencies: finished with status 'done' 2023-02-22T22:17:10,385 Getting requirements to build wheel: started 2023-02-22T22:17:10,387 Running command Getting requirements to build wheel 2023-02-22T22:17:12,189 running egg_info 2023-02-22T22:17:12,204 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-02-22T22:17:12,207 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-22T22:17:12,212 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-02-22T22:17:12,215 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-02-22T22:17:12,335 listing git files failed - pretending there aren't any 2023-02-22T22:17:12,354 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:12,365 adding license file 'LICENSE.txt' 2023-02-22T22:17:12,374 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:12,511 Getting requirements to build wheel: finished with status 'done' 2023-02-22T22:17:12,540 Created temporary directory: /tmp/pip-modern-metadata-053a648s 2023-02-22T22:17:12,546 Preparing metadata (pyproject.toml): started 2023-02-22T22:17:12,548 Running command Preparing metadata (pyproject.toml) 2023-02-22T22:17:14,060 running dist_info 2023-02-22T22:17:14,103 creating /tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info 2023-02-22T22:17:14,117 writing /tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/PKG-INFO 2023-02-22T22:17:14,122 writing dependency_links to /tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-22T22:17:14,127 writing requirements to /tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/requires.txt 2023-02-22T22:17:14,129 writing top-level names to /tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/top_level.txt 2023-02-22T22:17:14,132 writing manifest file '/tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:14,247 listing git files failed - pretending there aren't any 2023-02-22T22:17:14,266 reading manifest file '/tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:14,273 adding license file 'LICENSE.txt' 2023-02-22T22:17:14,280 writing manifest file '/tmp/pip-modern-metadata-053a648s/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:14,282 creating '/tmp/pip-modern-metadata-053a648s/SingleCellExperiment-0.2.3.dist-info' 2023-02-22T22:17:14,832 Preparing metadata (pyproject.toml): finished with status 'done' 2023-02-22T22:17:14,846 Source in /tmp/pip-wheel-4c9pl8k4/singlecellexperiment_8b6c6fc16fab454192a33cab2d085db2 has version 0.2.3, which satisfies requirement singlecellexperiment==0.2.3 from https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz 2023-02-22T22:17:14,848 Removed singlecellexperiment==0.2.3 from https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz from build tracker '/tmp/pip-build-tracker-oyzdxpgc' 2023-02-22T22:17:14,858 Created temporary directory: /tmp/pip-unpack-2bglhv50 2023-02-22T22:17:14,859 Building wheels for collected packages: singlecellexperiment 2023-02-22T22:17:14,868 Created temporary directory: /tmp/pip-wheel-ge9pdkdf 2023-02-22T22:17:14,869 Destination directory: /tmp/pip-wheel-ge9pdkdf 2023-02-22T22:17:14,874 Building wheel for singlecellexperiment (pyproject.toml): started 2023-02-22T22:17:14,876 Running command Building wheel for singlecellexperiment (pyproject.toml) 2023-02-22T22:17:16,646 running bdist_wheel 2023-02-22T22:17:16,745 running build 2023-02-22T22:17:16,746 running build_py 2023-02-22T22:17:16,768 creating build 2023-02-22T22:17:16,769 creating build/lib 2023-02-22T22:17:16,770 creating build/lib/singlecellexperiment 2023-02-22T22:17:16,772 copying src/singlecellexperiment/SingleCellExperiment.py -> build/lib/singlecellexperiment 2023-02-22T22:17:16,777 copying src/singlecellexperiment/__init__.py -> build/lib/singlecellexperiment 2023-02-22T22:17:16,782 creating build/lib/singlecellexperiment/io 2023-02-22T22:17:16,784 copying src/singlecellexperiment/io/anndata.py -> build/lib/singlecellexperiment/io 2023-02-22T22:17:16,788 copying src/singlecellexperiment/io/tenx.py -> build/lib/singlecellexperiment/io 2023-02-22T22:17:16,791 copying src/singlecellexperiment/io/__init__.py -> build/lib/singlecellexperiment/io 2023-02-22T22:17:16,794 running egg_info 2023-02-22T22:17:16,846 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-02-22T22:17:16,849 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-22T22:17:16,853 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-02-22T22:17:16,855 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-02-22T22:17:16,939 listing git files failed - pretending there aren't any 2023-02-22T22:17:16,958 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:16,965 adding license file 'LICENSE.txt' 2023-02-22T22:17:16,975 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-22T22:17:17,028 installing to build/bdist.linux-armv7l/wheel 2023-02-22T22:17:17,028 running install 2023-02-22T22:17:17,091 running install_lib 2023-02-22T22:17:17,111 creating build/bdist.linux-armv7l 2023-02-22T22:17:17,112 creating build/bdist.linux-armv7l/wheel 2023-02-22T22:17:17,115 creating build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-22T22:17:17,117 copying build/lib/singlecellexperiment/SingleCellExperiment.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-22T22:17:17,123 copying build/lib/singlecellexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-22T22:17:17,127 creating build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-22T22:17:17,129 copying build/lib/singlecellexperiment/io/anndata.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-22T22:17:17,133 copying build/lib/singlecellexperiment/io/tenx.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-22T22:17:17,137 copying build/lib/singlecellexperiment/io/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-22T22:17:17,140 running install_egg_info 2023-02-22T22:17:17,161 Copying src/SingleCellExperiment.egg-info to build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.3-py3.7.egg-info 2023-02-22T22:17:17,184 running install_scripts 2023-02-22T22:17:17,218 creating build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.3.dist-info/WHEEL 2023-02-22T22:17:17,223 creating '/tmp/pip-wheel-ge9pdkdf/.tmp-ol_vhjpp/SingleCellExperiment-0.2.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-22T22:17:17,233 adding 'singlecellexperiment/SingleCellExperiment.py' 2023-02-22T22:17:17,236 adding 'singlecellexperiment/__init__.py' 2023-02-22T22:17:17,240 adding 'singlecellexperiment/io/__init__.py' 2023-02-22T22:17:17,242 adding 'singlecellexperiment/io/anndata.py' 2023-02-22T22:17:17,245 adding 'singlecellexperiment/io/tenx.py' 2023-02-22T22:17:17,247 adding 'SingleCellExperiment-0.2.3.dist-info/LICENSE.txt' 2023-02-22T22:17:17,250 adding 'SingleCellExperiment-0.2.3.dist-info/METADATA' 2023-02-22T22:17:17,252 adding 'SingleCellExperiment-0.2.3.dist-info/WHEEL' 2023-02-22T22:17:17,254 adding 'SingleCellExperiment-0.2.3.dist-info/top_level.txt' 2023-02-22T22:17:17,256 adding 'SingleCellExperiment-0.2.3.dist-info/RECORD' 2023-02-22T22:17:17,258 removing build/bdist.linux-armv7l/wheel 2023-02-22T22:17:17,438 Building wheel for singlecellexperiment (pyproject.toml): finished with status 'done' 2023-02-22T22:17:17,449 Created wheel for singlecellexperiment: filename=SingleCellExperiment-0.2.3-py3-none-any.whl size=8593 sha256=2e07a3126c601d37f155a55c3a06f37e8a02682d018134f280b6967a1a52c6bc 2023-02-22T22:17:17,452 Stored in directory: /tmp/pip-ephem-wheel-cache-gcwexpqd/wheels/81/07/cf/23d2cbe106f6e2f0571ca42f907c10f98ccfb95c6372368e94 2023-02-22T22:17:17,476 Successfully built singlecellexperiment 2023-02-22T22:17:17,484 Removed build tracker: '/tmp/pip-build-tracker-oyzdxpgc'