2023-02-24T20:06:34,020 Created temporary directory: /tmp/pip-ephem-wheel-cache-ushsjnnm 2023-02-24T20:06:34,023 Created temporary directory: /tmp/pip-build-tracker-mrco8iqi 2023-02-24T20:06:34,024 Initialized build tracking at /tmp/pip-build-tracker-mrco8iqi 2023-02-24T20:06:34,024 Created build tracker: /tmp/pip-build-tracker-mrco8iqi 2023-02-24T20:06:34,024 Entered build tracker: /tmp/pip-build-tracker-mrco8iqi 2023-02-24T20:06:34,024 Created temporary directory: /tmp/pip-wheel-bkn8aq4q 2023-02-24T20:06:34,029 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-24T20:06:34,032 Created temporary directory: /tmp/pip-ephem-wheel-cache-i2ro7eoa 2023-02-24T20:06:34,057 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-24T20:06:34,060 2 location(s) to search for versions of pyobo: 2023-02-24T20:06:34,060 * https://pypi.org/simple/pyobo/ 2023-02-24T20:06:34,060 * https://www.piwheels.org/simple/pyobo/ 2023-02-24T20:06:34,061 Fetching project page and analyzing links: https://pypi.org/simple/pyobo/ 2023-02-24T20:06:34,061 Getting page https://pypi.org/simple/pyobo/ 2023-02-24T20:06:34,063 Found index url https://pypi.org/simple 2023-02-24T20:06:34,124 Fetched page https://pypi.org/simple/pyobo/ as application/vnd.pypi.simple.v1+json 2023-02-24T20:06:34,143 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/98/5e/ad7ea3dab1d88562b4ccf8873bfab9c49117343adbead05aff3d31ab6bc9/pyobo-0.0.1-py3-none-any.whl 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https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,364 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.3.1-py3-none-any.whl#sha256=bc2d9a5a97b89253f7d827b05567c2b6140ea4493f0877660afeca1655f90f33 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,364 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.3.0-py3-none-any.whl#sha256=6684d9063f6ba556265f8634651f9ed1b74ba37151c619615ec792dd1986c570 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,364 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.15-py3-none-any.whl#sha256=3f986cdad27dce497ca234a41930fa4cbb26eb80e796358c24cfdaeedcb2e250 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,364 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.14-py3-none-any.whl#sha256=b76cdf6b664055d17eb03dc4f18d48179c95ce6f23499af4e9cd720169a104e5 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,364 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.13-py3-none-any.whl#sha256=735efb1e4a4c3265e532515a8b077be66ddedec2b408ff9c424251da14aee9a4 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,365 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.12-py3-none-any.whl#sha256=506e137c6204d1f7568f2bf7be71588894bb9f942d8b5bece59c1c653432ca8b (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,365 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.11-py3-none-any.whl#sha256=7b7fcc33f291a859d872d618f96a85e86c62e8561c5fca6979e239a7eb86fefc (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,365 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.10-py3-none-any.whl#sha256=f9aa37f7280f9188a74366784056e68272133a9c1bd15ef413febf71e863e1fb (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,365 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.9-py3-none-any.whl#sha256=ce7714694f50130144d0f2a5a45ef4db5b9bd3b07c4c22ef664e812e2251f126 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,365 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.8-py3-none-any.whl#sha256=b38dbb0953135c5309baa35889d3851e5f49f490017ffccb751aa21556b21cb1 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,366 Skipping link: No binaries permitted for pyobo: 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https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,366 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.3-py3-none-any.whl#sha256=4e262c4839fea79b92449e9809e00fd1d7d3df10cbe3dd680d9111be17f7f7ac (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,367 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.2-py3-none-any.whl#sha256=4933916481bfe77083d1e573f892b59c401204dca180e7affe6db85e6f0a113e (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,367 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.2.1-py3-none-any.whl#sha256=79a0750aeb34dd94d1db1590c2adbb1abd939a771d2cfa2882e95f9a087d8bbf (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,367 Skipping link: No binaries permitted for pyobo: 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https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,368 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.1.0-py3-none-any.whl#sha256=78e61f4f8398440e0eb513d288ac4854ebff328398d8417dbafd34d6b9d99222 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,368 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.7-py3-none-any.whl#sha256=285d893c88b4315a10b51c4ff6a81390ae31c8109bfb2768a60a01ed56ae4a2b (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,368 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.6-py3-none-any.whl#sha256=6ccc3381e5f1199d0c23b5d7ef6ad6fe670bb02f2ac211c70d04f00662856268 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,368 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.5-py3-none-any.whl#sha256=4e1886a0db20d40c8678d8501bfc695450f800c0ca0b4e5fbbfd835a40a03772 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,369 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.4-py3-none-any.whl#sha256=c85b32484262f90bffa2fc2e8ff832b044ec28aa7bee288c54f5ee28b898de5b (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,369 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.3-py3-none-any.whl#sha256=ca6f721336e89df9ff8e2b71ea53bfa443d58d60b2d5997b3ed771f23b35b7b9 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,369 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.2-py3-none-any.whl#sha256=9c2d580cffab8a8ca4ae56b615ddb82ed18a1d7e174818557da52dba258eaa46 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-24T20:06:34,369 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.1-py3-none-any.whl#sha256=fa8b0bd5daff8df2ad48a133514a2b5fee29f18f806465ef49f7cc12042c4e51 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-24T20:06:34,369 Skipping link: not a file: https://www.piwheels.org/simple/pyobo/ 2023-02-24T20:06:34,370 Skipping link: not a file: https://pypi.org/simple/pyobo/ 2023-02-24T20:06:34,398 Given no hashes to check 1 links for project 'pyobo': discarding no candidates 2023-02-24T20:06:34,423 Collecting pyobo==0.8.10 2023-02-24T20:06:34,426 Created temporary directory: /tmp/pip-unpack-mn0h3kjz 2023-02-24T20:06:34,636 Downloading pyobo-0.8.10.tar.gz (233 kB) 2023-02-24T20:06:35,201 Added pyobo==0.8.10 from https://files.pythonhosted.org/packages/b0/70/d63c9abf8b46a7f0cae8271b0f6fb9fef20f63ef05096dade42c6ca06fdd/pyobo-0.8.10.tar.gz to build tracker '/tmp/pip-build-tracker-mrco8iqi' 2023-02-24T20:06:35,207 Created temporary directory: /tmp/pip-build-env-ziv12xvi 2023-02-24T20:06:35,221 Installing build dependencies: started 2023-02-24T20:06:35,223 Running command pip subprocess to install build dependencies 2023-02-24T20:06:36,438 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-02-24T20:06:37,013 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-24T20:06:37,039 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-24T20:06:38,696 Collecting setuptools 2023-02-24T20:06:38,813 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB) 2023-02-24T20:06:39,082 Collecting wheel 2023-02-24T20:06:39,100 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-02-24T20:06:40,881 Installing collected packages: wheel, setuptools 2023-02-24T20:06:41,032 Creating /tmp/pip-build-env-ziv12xvi/overlay/bin 2023-02-24T20:06:41,034 changing mode of /tmp/pip-build-env-ziv12xvi/overlay/bin/wheel to 755 2023-02-24T20:06:43,300 Successfully installed setuptools-67.4.0 wheel-0.38.4 2023-02-24T20:06:43,776 Installing build dependencies: finished with status 'done' 2023-02-24T20:06:43,783 Getting requirements to build wheel: started 2023-02-24T20:06:43,784 Running command Getting requirements to build wheel 2023-02-24T20:06:44,376 /tmp/pip-build-env-ziv12xvi/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-24T20:06:44,377 warnings.warn(msg, warning_class) 2023-02-24T20:06:44,541 running egg_info 2023-02-24T20:06:44,546 writing src/pyobo.egg-info/PKG-INFO 2023-02-24T20:06:44,549 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-02-24T20:06:44,552 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-02-24T20:06:44,554 writing requirements to src/pyobo.egg-info/requires.txt 2023-02-24T20:06:44,556 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-02-24T20:06:44,593 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:44,613 reading manifest template 'MANIFEST.in' 2023-02-24T20:06:44,630 no previously-included directories found matching 'benchmarking' 2023-02-24T20:06:44,631 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-24T20:06:44,711 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-24T20:06:44,713 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-24T20:06:44,714 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-24T20:06:44,716 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-24T20:06:44,718 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-24T20:06:44,719 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-24T20:06:44,720 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-24T20:06:44,721 warning: no previously-included files found matching 'Dockerfile' 2023-02-24T20:06:44,722 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-24T20:06:44,723 adding license file 'LICENSE' 2023-02-24T20:06:44,739 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:44,801 Getting requirements to build wheel: finished with status 'done' 2023-02-24T20:06:44,811 Created temporary directory: /tmp/pip-modern-metadata-fxa95f3z 2023-02-24T20:06:44,814 Preparing metadata (pyproject.toml): started 2023-02-24T20:06:44,815 Running command Preparing metadata (pyproject.toml) 2023-02-24T20:06:45,397 /tmp/pip-build-env-ziv12xvi/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-24T20:06:45,398 warnings.warn(msg, warning_class) 2023-02-24T20:06:45,426 running dist_info 2023-02-24T20:06:45,448 creating /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info 2023-02-24T20:06:45,452 writing /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/PKG-INFO 2023-02-24T20:06:45,456 writing dependency_links to /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/dependency_links.txt 2023-02-24T20:06:45,459 writing entry points to /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/entry_points.txt 2023-02-24T20:06:45,460 writing requirements to /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/requires.txt 2023-02-24T20:06:45,462 writing top-level names to /tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/top_level.txt 2023-02-24T20:06:45,463 writing manifest file '/tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:45,497 reading manifest file '/tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:45,500 reading manifest template 'MANIFEST.in' 2023-02-24T20:06:45,515 no previously-included directories found matching 'benchmarking' 2023-02-24T20:06:45,516 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-24T20:06:45,517 no previously-included directories found matching 'docs/source/api' 2023-02-24T20:06:45,594 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-24T20:06:45,595 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-24T20:06:45,596 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-24T20:06:45,598 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-24T20:06:45,599 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-24T20:06:45,600 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-24T20:06:45,601 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-24T20:06:45,601 warning: no previously-included files found matching 'Dockerfile' 2023-02-24T20:06:45,602 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-24T20:06:45,604 adding license file 'LICENSE' 2023-02-24T20:06:45,617 writing manifest file '/tmp/pip-modern-metadata-fxa95f3z/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:45,624 creating '/tmp/pip-modern-metadata-fxa95f3z/pyobo-0.8.10.dist-info' 2023-02-24T20:06:45,882 Preparing metadata (pyproject.toml): finished with status 'done' 2023-02-24T20:06:45,890 Source in /tmp/pip-wheel-bkn8aq4q/pyobo_6cd15a3ad57b4d2d8aafebf375e4e587 has version 0.8.10, which satisfies requirement pyobo==0.8.10 from https://files.pythonhosted.org/packages/b0/70/d63c9abf8b46a7f0cae8271b0f6fb9fef20f63ef05096dade42c6ca06fdd/pyobo-0.8.10.tar.gz 2023-02-24T20:06:45,891 Removed pyobo==0.8.10 from https://files.pythonhosted.org/packages/b0/70/d63c9abf8b46a7f0cae8271b0f6fb9fef20f63ef05096dade42c6ca06fdd/pyobo-0.8.10.tar.gz from build tracker '/tmp/pip-build-tracker-mrco8iqi' 2023-02-24T20:06:45,899 Created temporary directory: /tmp/pip-unpack-tuz10_sm 2023-02-24T20:06:45,900 Building wheels for collected packages: pyobo 2023-02-24T20:06:45,905 Created temporary directory: /tmp/pip-wheel-5vjqtunf 2023-02-24T20:06:45,905 Destination directory: /tmp/pip-wheel-5vjqtunf 2023-02-24T20:06:45,908 Building wheel for pyobo (pyproject.toml): started 2023-02-24T20:06:45,909 Running command Building wheel for pyobo (pyproject.toml) 2023-02-24T20:06:46,479 /tmp/pip-build-env-ziv12xvi/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-24T20:06:46,480 warnings.warn(msg, warning_class) 2023-02-24T20:06:46,625 running bdist_wheel 2023-02-24T20:06:46,659 running build 2023-02-24T20:06:46,659 running build_py 2023-02-24T20:06:46,668 creating build 2023-02-24T20:06:46,668 creating build/lib 2023-02-24T20:06:46,669 creating build/lib/pyobo 2023-02-24T20:06:46,670 copying src/pyobo/getters.py -> build/lib/pyobo 2023-02-24T20:06:46,673 copying src/pyobo/plugins.py -> build/lib/pyobo 2023-02-24T20:06:46,675 copying src/pyobo/mocks.py -> build/lib/pyobo 2023-02-24T20:06:46,677 copying src/pyobo/resource_utils.py -> build/lib/pyobo 2023-02-24T20:06:46,679 copying src/pyobo/gilda_utils.py -> build/lib/pyobo 2023-02-24T20:06:46,682 copying src/pyobo/reader.py -> build/lib/pyobo 2023-02-24T20:06:46,684 copying src/pyobo/identifier_utils.py -> build/lib/pyobo 2023-02-24T20:06:46,686 copying src/pyobo/__init__.py -> build/lib/pyobo 2023-02-24T20:06:46,688 copying src/pyobo/aws.py -> build/lib/pyobo 2023-02-24T20:06:46,690 copying src/pyobo/constants.py -> build/lib/pyobo 2023-02-24T20:06:46,692 copying src/pyobo/__main__.py -> build/lib/pyobo 2023-02-24T20:06:46,694 copying src/pyobo/normalizer.py -> build/lib/pyobo 2023-02-24T20:06:46,696 copying src/pyobo/version.py -> build/lib/pyobo 2023-02-24T20:06:46,701 creating build/lib/pyobo/sources 2023-02-24T20:06:46,702 copying src/pyobo/sources/icd_utils.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,704 copying src/pyobo/sources/pathbank.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,706 copying src/pyobo/sources/npass.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,708 copying src/pyobo/sources/go.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,709 copying src/pyobo/sources/biogrid.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,711 copying src/pyobo/sources/slm.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,713 copying src/pyobo/sources/agrovoc.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,715 copying src/pyobo/sources/msigdb.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,717 copying src/pyobo/sources/mgi.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,720 copying src/pyobo/sources/mirbase_mature.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,721 copying src/pyobo/sources/gmt_utils.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,723 copying src/pyobo/sources/pfam_clan.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,725 copying src/pyobo/sources/rgd.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,727 copying src/pyobo/sources/pfam.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,729 copying src/pyobo/sources/interpro.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,732 copying src/pyobo/sources/ncbigene.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,734 copying src/pyobo/sources/pombase.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,736 copying src/pyobo/sources/drugbank.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,738 copying src/pyobo/sources/famplex.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,740 copying src/pyobo/sources/pid.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,743 copying src/pyobo/sources/gwascentral_phenotype.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,745 copying src/pyobo/sources/gwascentral_study.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,747 copying src/pyobo/sources/hgncgenefamily.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,748 copying src/pyobo/sources/chebi.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,750 copying src/pyobo/sources/complexportal.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,752 copying src/pyobo/sources/dictybase_gene.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,754 copying src/pyobo/sources/chembl.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,756 copying src/pyobo/sources/__init__.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,758 copying src/pyobo/sources/ccle.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,760 copying src/pyobo/sources/antibodyregistry.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,762 copying src/pyobo/sources/rhea.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,764 copying src/pyobo/sources/mirbase_family.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,766 copying src/pyobo/sources/mirbase_constants.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,768 copying src/pyobo/sources/hgnc.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,770 copying src/pyobo/sources/zfin.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,772 copying src/pyobo/sources/cgnc.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,774 copying src/pyobo/sources/itis.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,776 copying src/pyobo/sources/mesh.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,778 copying src/pyobo/sources/drugbank_salt.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,780 copying src/pyobo/sources/mirbase.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,782 copying src/pyobo/sources/icd10.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,784 copying src/pyobo/sources/wikipathways.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,786 copying src/pyobo/sources/sgd.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,788 copying src/pyobo/sources/depmap.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,790 copying src/pyobo/sources/conso.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,792 copying src/pyobo/sources/utils.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,793 copying src/pyobo/sources/reactome.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,796 copying src/pyobo/sources/icd11.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,798 copying src/pyobo/sources/flybase.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,800 copying src/pyobo/sources/pubchem.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,802 copying src/pyobo/sources/expasy.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,804 copying src/pyobo/sources/drugcentral.py -> build/lib/pyobo/sources 2023-02-24T20:06:46,807 creating build/lib/pyobo/registries 2023-02-24T20:06:46,808 copying src/pyobo/registries/metaregistry.py -> build/lib/pyobo/registries 2023-02-24T20:06:46,810 copying src/pyobo/registries/__init__.py -> build/lib/pyobo/registries 2023-02-24T20:06:46,813 creating build/lib/pyobo/resources 2023-02-24T20:06:46,814 copying src/pyobo/resources/__init__.py -> build/lib/pyobo/resources 2023-02-24T20:06:46,816 copying src/pyobo/resources/ro.py -> build/lib/pyobo/resources 2023-02-24T20:06:46,818 creating build/lib/pyobo/apps 2023-02-24T20:06:46,819 copying src/pyobo/apps/__init__.py -> build/lib/pyobo/apps 2023-02-24T20:06:46,821 copying src/pyobo/apps/cli.py -> build/lib/pyobo/apps 2023-02-24T20:06:46,824 creating build/lib/pyobo/api 2023-02-24T20:06:46,825 copying src/pyobo/api/metadata.py -> build/lib/pyobo/api 2023-02-24T20:06:46,827 copying src/pyobo/api/alts.py -> build/lib/pyobo/api 2023-02-24T20:06:46,829 copying src/pyobo/api/hierarchy.py -> build/lib/pyobo/api 2023-02-24T20:06:46,831 copying src/pyobo/api/properties.py -> build/lib/pyobo/api 2023-02-24T20:06:46,834 copying src/pyobo/api/__init__.py -> build/lib/pyobo/api 2023-02-24T20:06:46,836 copying src/pyobo/api/names.py -> build/lib/pyobo/api 2023-02-24T20:06:46,838 copying src/pyobo/api/species.py -> build/lib/pyobo/api 2023-02-24T20:06:46,840 copying src/pyobo/api/xrefs.py -> build/lib/pyobo/api 2023-02-24T20:06:46,842 copying src/pyobo/api/relations.py -> build/lib/pyobo/api 2023-02-24T20:06:46,844 copying src/pyobo/api/typedefs.py -> build/lib/pyobo/api 2023-02-24T20:06:46,846 copying src/pyobo/api/utils.py -> build/lib/pyobo/api 2023-02-24T20:06:46,849 creating build/lib/pyobo/utils 2023-02-24T20:06:46,849 copying src/pyobo/utils/io.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,852 copying src/pyobo/utils/cache.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,854 copying src/pyobo/utils/path.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,856 copying src/pyobo/utils/misc.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,858 copying src/pyobo/utils/__init__.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,860 copying src/pyobo/utils/iter.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,862 copying src/pyobo/utils/ndex_utils.py -> build/lib/pyobo/utils 2023-02-24T20:06:46,864 creating build/lib/pyobo/ssg 2023-02-24T20:06:46,865 copying src/pyobo/ssg/__init__.py -> build/lib/pyobo/ssg 2023-02-24T20:06:46,868 creating build/lib/pyobo/xrefdb 2023-02-24T20:06:46,869 copying src/pyobo/xrefdb/priority.py -> build/lib/pyobo/xrefdb 2023-02-24T20:06:46,871 copying src/pyobo/xrefdb/bengo.py -> build/lib/pyobo/xrefdb 2023-02-24T20:06:46,873 copying src/pyobo/xrefdb/__init__.py -> build/lib/pyobo/xrefdb 2023-02-24T20:06:46,875 copying src/pyobo/xrefdb/canonicalizer.py -> build/lib/pyobo/xrefdb 2023-02-24T20:06:46,877 copying src/pyobo/xrefdb/xrefs_pipeline.py -> build/lib/pyobo/xrefdb 2023-02-24T20:06:46,880 creating build/lib/pyobo/cli 2023-02-24T20:06:46,881 copying src/pyobo/cli/lookup.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,884 copying src/pyobo/cli/__init__.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,885 copying src/pyobo/cli/database.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,888 copying src/pyobo/cli/aws.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,890 copying src/pyobo/cli/cli.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,892 copying src/pyobo/cli/utils.py -> build/lib/pyobo/cli 2023-02-24T20:06:46,894 creating build/lib/pyobo/struct 2023-02-24T20:06:46,895 copying src/pyobo/struct/struct.py -> build/lib/pyobo/struct 2023-02-24T20:06:46,899 copying src/pyobo/struct/typedef.py -> build/lib/pyobo/struct 2023-02-24T20:06:46,901 copying src/pyobo/struct/reference.py -> build/lib/pyobo/struct 2023-02-24T20:06:46,903 copying src/pyobo/struct/__init__.py -> build/lib/pyobo/struct 2023-02-24T20:06:46,905 copying src/pyobo/struct/utils.py -> build/lib/pyobo/struct 2023-02-24T20:06:46,908 creating build/lib/pyobo/sources/umls 2023-02-24T20:06:46,908 copying src/pyobo/sources/umls/umls.py -> build/lib/pyobo/sources/umls 2023-02-24T20:06:46,911 copying src/pyobo/sources/umls/__init__.py -> build/lib/pyobo/sources/umls 2023-02-24T20:06:46,912 copying src/pyobo/sources/umls/__main__.py -> build/lib/pyobo/sources/umls 2023-02-24T20:06:46,915 creating build/lib/pyobo/sources/uniprot 2023-02-24T20:06:46,916 copying src/pyobo/sources/uniprot/uniprot_ptm.py -> build/lib/pyobo/sources/uniprot 2023-02-24T20:06:46,918 copying src/pyobo/sources/uniprot/__init__.py -> build/lib/pyobo/sources/uniprot 2023-02-24T20:06:46,920 copying src/pyobo/sources/uniprot/uniprot.py -> build/lib/pyobo/sources/uniprot 2023-02-24T20:06:46,922 creating build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,923 copying src/pyobo/sources/selventa/sdis.py -> build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,925 copying src/pyobo/sources/selventa/scomp.py -> build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,927 copying src/pyobo/sources/selventa/schem.py -> build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,929 copying src/pyobo/sources/selventa/__init__.py -> build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,931 copying src/pyobo/sources/selventa/sfam.py -> build/lib/pyobo/sources/selventa 2023-02-24T20:06:46,933 creating build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,934 copying src/pyobo/sources/kegg/api.py -> build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,936 copying src/pyobo/sources/kegg/genes.py -> build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,938 copying src/pyobo/sources/kegg/__init__.py -> build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,940 copying src/pyobo/sources/kegg/genome.py -> build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,942 copying src/pyobo/sources/kegg/pathway.py -> build/lib/pyobo/sources/kegg 2023-02-24T20:06:46,945 creating build/lib/pyobo/apps/mapper 2023-02-24T20:06:46,946 copying src/pyobo/apps/mapper/__init__.py -> build/lib/pyobo/apps/mapper 2023-02-24T20:06:46,948 copying src/pyobo/apps/mapper/cli.py -> build/lib/pyobo/apps/mapper 2023-02-24T20:06:46,950 copying src/pyobo/apps/mapper/mapper.py -> build/lib/pyobo/apps/mapper 2023-02-24T20:06:46,952 copying src/pyobo/apps/mapper/__main__.py -> build/lib/pyobo/apps/mapper 2023-02-24T20:06:46,954 creating build/lib/pyobo/apps/gilda 2023-02-24T20:06:46,955 copying src/pyobo/apps/gilda/__init__.py -> build/lib/pyobo/apps/gilda 2023-02-24T20:06:46,957 copying src/pyobo/apps/gilda/cli.py -> build/lib/pyobo/apps/gilda 2023-02-24T20:06:46,959 copying src/pyobo/apps/gilda/app.py -> build/lib/pyobo/apps/gilda 2023-02-24T20:06:46,961 copying src/pyobo/apps/gilda/__main__.py -> build/lib/pyobo/apps/gilda 2023-02-24T20:06:46,964 creating build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,965 copying src/pyobo/xrefdb/sources/compath.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,967 copying src/pyobo/xrefdb/sources/biomappings.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,969 copying src/pyobo/xrefdb/sources/famplex.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,970 copying src/pyobo/xrefdb/sources/intact.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,972 copying src/pyobo/xrefdb/sources/chembl.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,974 copying src/pyobo/xrefdb/sources/__init__.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,976 copying src/pyobo/xrefdb/sources/ncit.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,978 copying src/pyobo/xrefdb/sources/cbms2019.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,980 copying src/pyobo/xrefdb/sources/gilda.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,982 copying src/pyobo/xrefdb/sources/pubchem.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,984 copying src/pyobo/xrefdb/sources/wikidata.py -> build/lib/pyobo/xrefdb/sources 2023-02-24T20:06:46,986 running egg_info 2023-02-24T20:06:47,008 writing src/pyobo.egg-info/PKG-INFO 2023-02-24T20:06:47,010 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-02-24T20:06:47,013 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-02-24T20:06:47,014 writing requirements to src/pyobo.egg-info/requires.txt 2023-02-24T20:06:47,015 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-02-24T20:06:47,037 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:47,045 reading manifest template 'MANIFEST.in' 2023-02-24T20:06:47,060 no previously-included directories found matching 'benchmarking' 2023-02-24T20:06:47,062 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-24T20:06:47,133 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-24T20:06:47,134 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-24T20:06:47,136 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-24T20:06:47,138 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-24T20:06:47,139 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-24T20:06:47,140 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-24T20:06:47,141 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-24T20:06:47,142 warning: no previously-included files found matching 'Dockerfile' 2023-02-24T20:06:47,143 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-24T20:06:47,145 adding license file 'LICENSE' 2023-02-24T20:06:47,160 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-24T20:06:47,166 /tmp/pip-build-env-ziv12xvi/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyobo.apps.gilda.templates' as data is deprecated, please list it in `packages`. 2023-02-24T20:06:47,166 !! 2023-02-24T20:06:47,167 ############################ 2023-02-24T20:06:47,167 # Package would be ignored # 2023-02-24T20:06:47,167 ############################ 2023-02-24T20:06:47,167 Python recognizes 'pyobo.apps.gilda.templates' as an importable package, 2023-02-24T20:06:47,167 but it is not listed in the `packages` configuration of setuptools. 2023-02-24T20:06:47,167 'pyobo.apps.gilda.templates' has been automatically added to the distribution only 2023-02-24T20:06:47,167 because it may contain data files, but this behavior is likely to change 2023-02-24T20:06:47,168 in future versions of setuptools (and therefore is considered deprecated). 2023-02-24T20:06:47,168 Please make sure that 'pyobo.apps.gilda.templates' is included as a package by using 2023-02-24T20:06:47,168 the `packages` configuration field or the proper discovery methods 2023-02-24T20:06:47,168 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-24T20:06:47,168 instead of `find_packages(...)`/`find:`). 2023-02-24T20:06:47,168 You can read more about "package discovery" and "data files" on setuptools 2023-02-24T20:06:47,169 documentation page. 2023-02-24T20:06:47,169 !! 2023-02-24T20:06:47,169 check.warn(importable) 2023-02-24T20:06:47,169 /tmp/pip-build-env-ziv12xvi/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyobo.apps.mapper.templates' as data is deprecated, please list it in `packages`. 2023-02-24T20:06:47,169 !! 2023-02-24T20:06:47,170 ############################ 2023-02-24T20:06:47,170 # Package would be ignored # 2023-02-24T20:06:47,170 ############################ 2023-02-24T20:06:47,170 Python recognizes 'pyobo.apps.mapper.templates' as an importable package, 2023-02-24T20:06:47,170 but it is not listed in the `packages` configuration of setuptools. 2023-02-24T20:06:47,170 'pyobo.apps.mapper.templates' has been automatically added to the distribution only 2023-02-24T20:06:47,171 because it may contain data files, but this behavior is likely to change 2023-02-24T20:06:47,171 in future versions of setuptools (and therefore is considered deprecated). 2023-02-24T20:06:47,171 Please make sure that 'pyobo.apps.mapper.templates' is included as a package by using 2023-02-24T20:06:47,171 the `packages` configuration field or the proper discovery methods 2023-02-24T20:06:47,171 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-24T20:06:47,171 instead of `find_packages(...)`/`find:`). 2023-02-24T20:06:47,171 You can read more about "package discovery" and "data files" on setuptools 2023-02-24T20:06:47,172 documentation page. 2023-02-24T20:06:47,172 !! 2023-02-24T20:06:47,172 check.warn(importable) 2023-02-24T20:06:47,172 copying src/pyobo/registries/metaregistry.json -> build/lib/pyobo/registries 2023-02-24T20:06:47,175 copying src/pyobo/resources/ro.tsv -> build/lib/pyobo/resources 2023-02-24T20:06:47,178 copying src/pyobo/ssg/base.html -> build/lib/pyobo/ssg 2023-02-24T20:06:47,180 copying src/pyobo/ssg/index.html -> build/lib/pyobo/ssg 2023-02-24T20:06:47,182 copying src/pyobo/ssg/term.html -> build/lib/pyobo/ssg 2023-02-24T20:06:47,184 copying src/pyobo/ssg/typedef.html -> build/lib/pyobo/ssg 2023-02-24T20:06:47,186 copying src/pyobo/sources/umls/synonym_types.tsv -> build/lib/pyobo/sources/umls 2023-02-24T20:06:47,190 creating build/lib/pyobo/apps/mapper/templates 2023-02-24T20:06:47,191 copying src/pyobo/apps/mapper/templates/base.html -> build/lib/pyobo/apps/mapper/templates 2023-02-24T20:06:47,193 copying src/pyobo/apps/mapper/templates/mapper_home.html -> build/lib/pyobo/apps/mapper/templates 2023-02-24T20:06:47,196 creating build/lib/pyobo/apps/gilda/templates 2023-02-24T20:06:47,196 copying src/pyobo/apps/gilda/templates/base.html -> build/lib/pyobo/apps/gilda/templates 2023-02-24T20:06:47,199 copying src/pyobo/apps/gilda/templates/home.html -> build/lib/pyobo/apps/gilda/templates 2023-02-24T20:06:47,201 copying src/pyobo/apps/gilda/templates/matches.html -> build/lib/pyobo/apps/gilda/templates 2023-02-24T20:06:47,230 installing to build/bdist.linux-armv7l/wheel 2023-02-24T20:06:47,230 running install 2023-02-24T20:06:47,254 running install_lib 2023-02-24T20:06:47,262 creating build/bdist.linux-armv7l 2023-02-24T20:06:47,262 creating build/bdist.linux-armv7l/wheel 2023-02-24T20:06:47,264 creating build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,265 copying build/lib/pyobo/getters.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,269 creating build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,270 copying build/lib/pyobo/sources/icd_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,272 copying build/lib/pyobo/sources/pathbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,274 copying build/lib/pyobo/sources/npass.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,276 copying build/lib/pyobo/sources/go.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,278 copying build/lib/pyobo/sources/biogrid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,280 copying build/lib/pyobo/sources/slm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,282 copying build/lib/pyobo/sources/agrovoc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,284 copying build/lib/pyobo/sources/msigdb.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,286 copying build/lib/pyobo/sources/mgi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,289 copying build/lib/pyobo/sources/mirbase_mature.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,291 copying build/lib/pyobo/sources/gmt_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,292 copying build/lib/pyobo/sources/pfam_clan.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,294 copying build/lib/pyobo/sources/rgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,296 copying build/lib/pyobo/sources/pfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,298 copying build/lib/pyobo/sources/interpro.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,301 creating build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-24T20:06:47,302 copying build/lib/pyobo/sources/umls/umls.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-24T20:06:47,304 copying build/lib/pyobo/sources/umls/synonym_types.tsv -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-24T20:06:47,306 copying build/lib/pyobo/sources/umls/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-24T20:06:47,308 copying build/lib/pyobo/sources/umls/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-24T20:06:47,310 copying build/lib/pyobo/sources/ncbigene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,313 copying build/lib/pyobo/sources/pombase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,314 copying build/lib/pyobo/sources/drugbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,317 copying build/lib/pyobo/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,319 copying build/lib/pyobo/sources/pid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,322 copying build/lib/pyobo/sources/gwascentral_phenotype.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,323 copying build/lib/pyobo/sources/gwascentral_study.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,325 copying build/lib/pyobo/sources/hgncgenefamily.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,327 copying build/lib/pyobo/sources/chebi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,329 copying build/lib/pyobo/sources/complexportal.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,331 copying build/lib/pyobo/sources/dictybase_gene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,333 copying build/lib/pyobo/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,335 copying build/lib/pyobo/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,338 creating build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-24T20:06:47,338 copying build/lib/pyobo/sources/uniprot/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-24T20:06:47,340 copying build/lib/pyobo/sources/uniprot/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-24T20:06:47,342 copying build/lib/pyobo/sources/uniprot/uniprot.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-24T20:06:47,344 copying build/lib/pyobo/sources/ccle.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,346 creating build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,347 copying build/lib/pyobo/sources/selventa/sdis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,349 copying build/lib/pyobo/sources/selventa/scomp.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,351 copying build/lib/pyobo/sources/selventa/schem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,353 copying build/lib/pyobo/sources/selventa/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,355 copying build/lib/pyobo/sources/selventa/sfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-24T20:06:47,357 copying build/lib/pyobo/sources/antibodyregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,359 copying build/lib/pyobo/sources/rhea.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,361 copying build/lib/pyobo/sources/mirbase_family.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,362 copying build/lib/pyobo/sources/mirbase_constants.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,365 creating build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,366 copying build/lib/pyobo/sources/kegg/api.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,368 copying build/lib/pyobo/sources/kegg/genes.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,370 copying build/lib/pyobo/sources/kegg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,372 copying build/lib/pyobo/sources/kegg/genome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,374 copying build/lib/pyobo/sources/kegg/pathway.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-24T20:06:47,376 copying build/lib/pyobo/sources/hgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,379 copying build/lib/pyobo/sources/zfin.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,382 copying build/lib/pyobo/sources/cgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,384 copying build/lib/pyobo/sources/itis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,385 copying build/lib/pyobo/sources/mesh.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,388 copying build/lib/pyobo/sources/drugbank_salt.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,390 copying build/lib/pyobo/sources/mirbase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,393 copying build/lib/pyobo/sources/icd10.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,395 copying build/lib/pyobo/sources/wikipathways.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,397 copying build/lib/pyobo/sources/sgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,399 copying build/lib/pyobo/sources/depmap.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,401 copying build/lib/pyobo/sources/conso.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,403 copying build/lib/pyobo/sources/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,405 copying build/lib/pyobo/sources/reactome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,407 copying build/lib/pyobo/sources/icd11.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,409 copying build/lib/pyobo/sources/flybase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,412 copying build/lib/pyobo/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,414 copying build/lib/pyobo/sources/expasy.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,416 copying build/lib/pyobo/sources/drugcentral.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-24T20:06:47,418 copying build/lib/pyobo/plugins.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,421 creating build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-24T20:06:47,422 copying build/lib/pyobo/registries/metaregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-24T20:06:47,424 copying build/lib/pyobo/registries/metaregistry.json -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-24T20:06:47,427 copying build/lib/pyobo/registries/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-24T20:06:47,429 creating build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-24T20:06:47,430 copying build/lib/pyobo/resources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-24T20:06:47,432 copying build/lib/pyobo/resources/ro.tsv -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-24T20:06:47,435 copying build/lib/pyobo/resources/ro.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-24T20:06:47,437 copying build/lib/pyobo/mocks.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,439 copying build/lib/pyobo/resource_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,441 copying build/lib/pyobo/gilda_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,444 copying build/lib/pyobo/reader.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,447 creating build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-24T20:06:47,449 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-24T20:06:47,450 copying build/lib/pyobo/apps/mapper/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-24T20:06:47,452 copying build/lib/pyobo/apps/mapper/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-24T20:06:47,454 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-24T20:06:47,455 copying build/lib/pyobo/apps/mapper/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-24T20:06:47,458 copying build/lib/pyobo/apps/mapper/templates/mapper_home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-24T20:06:47,460 copying build/lib/pyobo/apps/mapper/mapper.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-24T20:06:47,462 copying build/lib/pyobo/apps/mapper/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-24T20:06:47,464 copying build/lib/pyobo/apps/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-24T20:06:47,467 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-24T20:06:47,468 copying build/lib/pyobo/apps/gilda/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-24T20:06:47,470 copying build/lib/pyobo/apps/gilda/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-24T20:06:47,473 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-24T20:06:47,474 copying build/lib/pyobo/apps/gilda/templates/matches.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-24T20:06:47,476 copying build/lib/pyobo/apps/gilda/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-24T20:06:47,478 copying build/lib/pyobo/apps/gilda/templates/home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-24T20:06:47,481 copying build/lib/pyobo/apps/gilda/app.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-24T20:06:47,483 copying build/lib/pyobo/apps/gilda/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-24T20:06:47,485 copying build/lib/pyobo/apps/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-24T20:06:47,487 copying build/lib/pyobo/identifier_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,490 creating build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,491 copying build/lib/pyobo/api/metadata.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,493 copying build/lib/pyobo/api/alts.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,495 copying build/lib/pyobo/api/hierarchy.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,498 copying build/lib/pyobo/api/properties.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,501 copying build/lib/pyobo/api/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,503 copying build/lib/pyobo/api/names.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,505 copying build/lib/pyobo/api/species.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,508 copying build/lib/pyobo/api/xrefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,510 copying build/lib/pyobo/api/relations.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,512 copying build/lib/pyobo/api/typedefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,514 copying build/lib/pyobo/api/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-24T20:06:47,516 copying build/lib/pyobo/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,518 copying build/lib/pyobo/aws.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,521 copying build/lib/pyobo/constants.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,524 creating build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,525 copying build/lib/pyobo/utils/io.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,528 copying build/lib/pyobo/utils/cache.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,530 copying build/lib/pyobo/utils/path.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,532 copying build/lib/pyobo/utils/misc.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,534 copying build/lib/pyobo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,536 copying build/lib/pyobo/utils/iter.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,538 copying build/lib/pyobo/utils/ndex_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-24T20:06:47,541 creating build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,542 copying build/lib/pyobo/ssg/term.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,544 copying build/lib/pyobo/ssg/base.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,546 copying build/lib/pyobo/ssg/typedef.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,548 copying build/lib/pyobo/ssg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,551 copying build/lib/pyobo/ssg/index.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-24T20:06:47,553 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,554 copying build/lib/pyobo/xrefdb/priority.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,557 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,558 copying build/lib/pyobo/xrefdb/sources/compath.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,560 copying build/lib/pyobo/xrefdb/sources/biomappings.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,562 copying build/lib/pyobo/xrefdb/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,564 copying build/lib/pyobo/xrefdb/sources/intact.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,566 copying build/lib/pyobo/xrefdb/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,568 copying build/lib/pyobo/xrefdb/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,570 copying build/lib/pyobo/xrefdb/sources/ncit.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,572 copying build/lib/pyobo/xrefdb/sources/cbms2019.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,574 copying build/lib/pyobo/xrefdb/sources/gilda.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,576 copying build/lib/pyobo/xrefdb/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,578 copying build/lib/pyobo/xrefdb/sources/wikidata.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-24T20:06:47,579 copying build/lib/pyobo/xrefdb/bengo.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,581 copying build/lib/pyobo/xrefdb/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,583 copying build/lib/pyobo/xrefdb/canonicalizer.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,586 copying build/lib/pyobo/xrefdb/xrefs_pipeline.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-24T20:06:47,589 creating build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,590 copying build/lib/pyobo/cli/lookup.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,592 copying build/lib/pyobo/cli/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,594 copying build/lib/pyobo/cli/database.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,597 copying build/lib/pyobo/cli/aws.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,599 copying build/lib/pyobo/cli/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,600 copying build/lib/pyobo/cli/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-24T20:06:47,602 copying build/lib/pyobo/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,605 creating build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,606 copying build/lib/pyobo/struct/struct.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,609 copying build/lib/pyobo/struct/typedef.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,611 copying build/lib/pyobo/struct/reference.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,614 copying build/lib/pyobo/struct/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,616 copying build/lib/pyobo/struct/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-24T20:06:47,618 copying build/lib/pyobo/normalizer.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,620 copying build/lib/pyobo/version.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-24T20:06:47,622 running install_egg_info 2023-02-24T20:06:47,633 Copying src/pyobo.egg-info to build/bdist.linux-armv7l/wheel/pyobo-0.8.10-py3.9.egg-info 2023-02-24T20:06:47,649 running install_scripts 2023-02-24T20:06:47,679 creating build/bdist.linux-armv7l/wheel/pyobo-0.8.10.dist-info/WHEEL 2023-02-24T20:06:47,682 creating '/tmp/pip-wheel-5vjqtunf/.tmp-lwyfh4km/pyobo-0.8.10-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-24T20:06:47,685 adding 'pyobo/__init__.py' 2023-02-24T20:06:47,687 adding 'pyobo/__main__.py' 2023-02-24T20:06:47,689 adding 'pyobo/aws.py' 2023-02-24T20:06:47,691 adding 'pyobo/constants.py' 2023-02-24T20:06:47,695 adding 'pyobo/getters.py' 2023-02-24T20:06:47,697 adding 'pyobo/gilda_utils.py' 2023-02-24T20:06:47,699 adding 'pyobo/identifier_utils.py' 2023-02-24T20:06:47,701 adding 'pyobo/mocks.py' 2023-02-24T20:06:47,703 adding 'pyobo/normalizer.py' 2023-02-24T20:06:47,705 adding 'pyobo/plugins.py' 2023-02-24T20:06:47,708 adding 'pyobo/reader.py' 2023-02-24T20:06:47,710 adding 'pyobo/resource_utils.py' 2023-02-24T20:06:47,712 adding 'pyobo/version.py' 2023-02-24T20:06:47,714 adding 'pyobo/api/__init__.py' 2023-02-24T20:06:47,716 adding 'pyobo/api/alts.py' 2023-02-24T20:06:47,718 adding 'pyobo/api/hierarchy.py' 2023-02-24T20:06:47,720 adding 'pyobo/api/metadata.py' 2023-02-24T20:06:47,721 adding 'pyobo/api/names.py' 2023-02-24T20:06:47,723 adding 'pyobo/api/properties.py' 2023-02-24T20:06:47,725 adding 'pyobo/api/relations.py' 2023-02-24T20:06:47,728 adding 'pyobo/api/species.py' 2023-02-24T20:06:47,729 adding 'pyobo/api/typedefs.py' 2023-02-24T20:06:47,731 adding 'pyobo/api/utils.py' 2023-02-24T20:06:47,733 adding 'pyobo/api/xrefs.py' 2023-02-24T20:06:47,736 adding 'pyobo/apps/__init__.py' 2023-02-24T20:06:47,738 adding 'pyobo/apps/cli.py' 2023-02-24T20:06:47,740 adding 'pyobo/apps/gilda/__init__.py' 2023-02-24T20:06:47,742 adding 'pyobo/apps/gilda/__main__.py' 2023-02-24T20:06:47,743 adding 'pyobo/apps/gilda/app.py' 2023-02-24T20:06:47,745 adding 'pyobo/apps/gilda/cli.py' 2023-02-24T20:06:47,747 adding 'pyobo/apps/gilda/templates/base.html' 2023-02-24T20:06:47,749 adding 'pyobo/apps/gilda/templates/home.html' 2023-02-24T20:06:47,750 adding 'pyobo/apps/gilda/templates/matches.html' 2023-02-24T20:06:47,752 adding 'pyobo/apps/mapper/__init__.py' 2023-02-24T20:06:47,754 adding 'pyobo/apps/mapper/__main__.py' 2023-02-24T20:06:47,755 adding 'pyobo/apps/mapper/cli.py' 2023-02-24T20:06:47,758 adding 'pyobo/apps/mapper/mapper.py' 2023-02-24T20:06:47,760 adding 'pyobo/apps/mapper/templates/base.html' 2023-02-24T20:06:47,761 adding 'pyobo/apps/mapper/templates/mapper_home.html' 2023-02-24T20:06:47,764 adding 'pyobo/cli/__init__.py' 2023-02-24T20:06:47,765 adding 'pyobo/cli/aws.py' 2023-02-24T20:06:47,767 adding 'pyobo/cli/cli.py' 2023-02-24T20:06:47,769 adding 'pyobo/cli/database.py' 2023-02-24T20:06:47,772 adding 'pyobo/cli/lookup.py' 2023-02-24T20:06:47,773 adding 'pyobo/cli/utils.py' 2023-02-24T20:06:47,776 adding 'pyobo/registries/__init__.py' 2023-02-24T20:06:47,779 adding 'pyobo/registries/metaregistry.json' 2023-02-24T20:06:47,782 adding 'pyobo/registries/metaregistry.py' 2023-02-24T20:06:47,784 adding 'pyobo/resources/__init__.py' 2023-02-24T20:06:47,786 adding 'pyobo/resources/ro.py' 2023-02-24T20:06:47,790 adding 'pyobo/resources/ro.tsv' 2023-02-24T20:06:47,793 adding 'pyobo/sources/__init__.py' 2023-02-24T20:06:47,795 adding 'pyobo/sources/agrovoc.py' 2023-02-24T20:06:47,797 adding 'pyobo/sources/antibodyregistry.py' 2023-02-24T20:06:47,798 adding 'pyobo/sources/biogrid.py' 2023-02-24T20:06:47,800 adding 'pyobo/sources/ccle.py' 2023-02-24T20:06:47,802 adding 'pyobo/sources/cgnc.py' 2023-02-24T20:06:47,803 adding 'pyobo/sources/chebi.py' 2023-02-24T20:06:47,805 adding 'pyobo/sources/chembl.py' 2023-02-24T20:06:47,807 adding 'pyobo/sources/complexportal.py' 2023-02-24T20:06:47,809 adding 'pyobo/sources/conso.py' 2023-02-24T20:06:47,811 adding 'pyobo/sources/depmap.py' 2023-02-24T20:06:47,813 adding 'pyobo/sources/dictybase_gene.py' 2023-02-24T20:06:47,815 adding 'pyobo/sources/drugbank.py' 2023-02-24T20:06:47,817 adding 'pyobo/sources/drugbank_salt.py' 2023-02-24T20:06:47,819 adding 'pyobo/sources/drugcentral.py' 2023-02-24T20:06:47,821 adding 'pyobo/sources/expasy.py' 2023-02-24T20:06:47,823 adding 'pyobo/sources/famplex.py' 2023-02-24T20:06:47,825 adding 'pyobo/sources/flybase.py' 2023-02-24T20:06:47,827 adding 'pyobo/sources/gmt_utils.py' 2023-02-24T20:06:47,828 adding 'pyobo/sources/go.py' 2023-02-24T20:06:47,830 adding 'pyobo/sources/gwascentral_phenotype.py' 2023-02-24T20:06:47,832 adding 'pyobo/sources/gwascentral_study.py' 2023-02-24T20:06:47,835 adding 'pyobo/sources/hgnc.py' 2023-02-24T20:06:47,837 adding 'pyobo/sources/hgncgenefamily.py' 2023-02-24T20:06:47,839 adding 'pyobo/sources/icd10.py' 2023-02-24T20:06:47,841 adding 'pyobo/sources/icd11.py' 2023-02-24T20:06:47,842 adding 'pyobo/sources/icd_utils.py' 2023-02-24T20:06:47,844 adding 'pyobo/sources/interpro.py' 2023-02-24T20:06:47,846 adding 'pyobo/sources/itis.py' 2023-02-24T20:06:47,848 adding 'pyobo/sources/mesh.py' 2023-02-24T20:06:47,850 adding 'pyobo/sources/mgi.py' 2023-02-24T20:06:47,852 adding 'pyobo/sources/mirbase.py' 2023-02-24T20:06:47,854 adding 'pyobo/sources/mirbase_constants.py' 2023-02-24T20:06:47,855 adding 'pyobo/sources/mirbase_family.py' 2023-02-24T20:06:47,857 adding 'pyobo/sources/mirbase_mature.py' 2023-02-24T20:06:47,859 adding 'pyobo/sources/msigdb.py' 2023-02-24T20:06:47,861 adding 'pyobo/sources/ncbigene.py' 2023-02-24T20:06:47,863 adding 'pyobo/sources/npass.py' 2023-02-24T20:06:47,865 adding 'pyobo/sources/pathbank.py' 2023-02-24T20:06:47,866 adding 'pyobo/sources/pfam.py' 2023-02-24T20:06:47,868 adding 'pyobo/sources/pfam_clan.py' 2023-02-24T20:06:47,870 adding 'pyobo/sources/pid.py' 2023-02-24T20:06:47,872 adding 'pyobo/sources/pombase.py' 2023-02-24T20:06:47,874 adding 'pyobo/sources/pubchem.py' 2023-02-24T20:06:47,875 adding 'pyobo/sources/reactome.py' 2023-02-24T20:06:47,878 adding 'pyobo/sources/rgd.py' 2023-02-24T20:06:47,880 adding 'pyobo/sources/rhea.py' 2023-02-24T20:06:47,881 adding 'pyobo/sources/sgd.py' 2023-02-24T20:06:47,883 adding 'pyobo/sources/slm.py' 2023-02-24T20:06:47,885 adding 'pyobo/sources/utils.py' 2023-02-24T20:06:47,886 adding 'pyobo/sources/wikipathways.py' 2023-02-24T20:06:47,888 adding 'pyobo/sources/zfin.py' 2023-02-24T20:06:47,891 adding 'pyobo/sources/kegg/__init__.py' 2023-02-24T20:06:47,892 adding 'pyobo/sources/kegg/api.py' 2023-02-24T20:06:47,894 adding 'pyobo/sources/kegg/genes.py' 2023-02-24T20:06:47,896 adding 'pyobo/sources/kegg/genome.py' 2023-02-24T20:06:47,898 adding 'pyobo/sources/kegg/pathway.py' 2023-02-24T20:06:47,900 adding 'pyobo/sources/selventa/__init__.py' 2023-02-24T20:06:47,902 adding 'pyobo/sources/selventa/schem.py' 2023-02-24T20:06:47,904 adding 'pyobo/sources/selventa/scomp.py' 2023-02-24T20:06:47,905 adding 'pyobo/sources/selventa/sdis.py' 2023-02-24T20:06:47,907 adding 'pyobo/sources/selventa/sfam.py' 2023-02-24T20:06:47,909 adding 'pyobo/sources/umls/__init__.py' 2023-02-24T20:06:47,911 adding 'pyobo/sources/umls/__main__.py' 2023-02-24T20:06:47,913 adding 'pyobo/sources/umls/synonym_types.tsv' 2023-02-24T20:06:47,915 adding 'pyobo/sources/umls/umls.py' 2023-02-24T20:06:47,917 adding 'pyobo/sources/uniprot/__init__.py' 2023-02-24T20:06:47,919 adding 'pyobo/sources/uniprot/uniprot.py' 2023-02-24T20:06:47,921 adding 'pyobo/sources/uniprot/uniprot_ptm.py' 2023-02-24T20:06:47,924 adding 'pyobo/ssg/__init__.py' 2023-02-24T20:06:47,925 adding 'pyobo/ssg/base.html' 2023-02-24T20:06:47,927 adding 'pyobo/ssg/index.html' 2023-02-24T20:06:47,929 adding 'pyobo/ssg/term.html' 2023-02-24T20:06:47,931 adding 'pyobo/ssg/typedef.html' 2023-02-24T20:06:47,933 adding 'pyobo/struct/__init__.py' 2023-02-24T20:06:47,935 adding 'pyobo/struct/reference.py' 2023-02-24T20:06:47,941 adding 'pyobo/struct/struct.py' 2023-02-24T20:06:47,944 adding 'pyobo/struct/typedef.py' 2023-02-24T20:06:47,945 adding 'pyobo/struct/utils.py' 2023-02-24T20:06:47,948 adding 'pyobo/utils/__init__.py' 2023-02-24T20:06:47,949 adding 'pyobo/utils/cache.py' 2023-02-24T20:06:47,951 adding 'pyobo/utils/io.py' 2023-02-24T20:06:47,953 adding 'pyobo/utils/iter.py' 2023-02-24T20:06:47,955 adding 'pyobo/utils/misc.py' 2023-02-24T20:06:47,956 adding 'pyobo/utils/ndex_utils.py' 2023-02-24T20:06:47,958 adding 'pyobo/utils/path.py' 2023-02-24T20:06:47,960 adding 'pyobo/xrefdb/__init__.py' 2023-02-24T20:06:47,962 adding 'pyobo/xrefdb/bengo.py' 2023-02-24T20:06:47,964 adding 'pyobo/xrefdb/canonicalizer.py' 2023-02-24T20:06:47,966 adding 'pyobo/xrefdb/priority.py' 2023-02-24T20:06:47,968 adding 'pyobo/xrefdb/xrefs_pipeline.py' 2023-02-24T20:06:47,970 adding 'pyobo/xrefdb/sources/__init__.py' 2023-02-24T20:06:47,972 adding 'pyobo/xrefdb/sources/biomappings.py' 2023-02-24T20:06:47,974 adding 'pyobo/xrefdb/sources/cbms2019.py' 2023-02-24T20:06:47,976 adding 'pyobo/xrefdb/sources/chembl.py' 2023-02-24T20:06:47,977 adding 'pyobo/xrefdb/sources/compath.py' 2023-02-24T20:06:47,979 adding 'pyobo/xrefdb/sources/famplex.py' 2023-02-24T20:06:47,981 adding 'pyobo/xrefdb/sources/gilda.py' 2023-02-24T20:06:47,982 adding 'pyobo/xrefdb/sources/intact.py' 2023-02-24T20:06:47,984 adding 'pyobo/xrefdb/sources/ncit.py' 2023-02-24T20:06:47,986 adding 'pyobo/xrefdb/sources/pubchem.py' 2023-02-24T20:06:47,988 adding 'pyobo/xrefdb/sources/wikidata.py' 2023-02-24T20:06:47,990 adding 'pyobo-0.8.10.dist-info/LICENSE' 2023-02-24T20:06:47,994 adding 'pyobo-0.8.10.dist-info/METADATA' 2023-02-24T20:06:47,995 adding 'pyobo-0.8.10.dist-info/WHEEL' 2023-02-24T20:06:47,996 adding 'pyobo-0.8.10.dist-info/entry_points.txt' 2023-02-24T20:06:47,998 adding 'pyobo-0.8.10.dist-info/top_level.txt' 2023-02-24T20:06:48,001 adding 'pyobo-0.8.10.dist-info/RECORD' 2023-02-24T20:06:48,007 removing build/bdist.linux-armv7l/wheel 2023-02-24T20:06:48,137 Building wheel for pyobo (pyproject.toml): finished with status 'done' 2023-02-24T20:06:48,147 Created wheel for pyobo: filename=pyobo-0.8.10-py3-none-any.whl size=218280 sha256=391bb6cd610ea17d8c4d1caf80e845623ce33f3933f6d328522e044ebe7c8a75 2023-02-24T20:06:48,148 Stored in directory: /tmp/pip-ephem-wheel-cache-i2ro7eoa/wheels/15/1a/fd/f01ac7a313d65301d3da99a777f00fe560e697cd7ed7316efe 2023-02-24T20:06:48,168 Successfully built pyobo 2023-02-24T20:06:48,179 Removed build tracker: '/tmp/pip-build-tracker-mrco8iqi'