2023-02-24T21:06:37,556 Created temporary directory: /tmp/pip-ephem-wheel-cache-2p2ia5pb
2023-02-24T21:06:37,559 Created temporary directory: /tmp/pip-build-tracker-vy4yrwzo
2023-02-24T21:06:37,560 Initialized build tracking at /tmp/pip-build-tracker-vy4yrwzo
2023-02-24T21:06:37,560 Created build tracker: /tmp/pip-build-tracker-vy4yrwzo
2023-02-24T21:06:37,560 Entered build tracker: /tmp/pip-build-tracker-vy4yrwzo
2023-02-24T21:06:37,561 Created temporary directory: /tmp/pip-wheel-_158jku7
2023-02-24T21:06:37,565 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-24T21:06:37,568 Created temporary directory: /tmp/pip-ephem-wheel-cache-10gib6i6
2023-02-24T21:06:37,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-24T21:06:37,600 2 location(s) to search for versions of glycopeptidepy:
2023-02-24T21:06:37,600 * https://pypi.org/simple/glycopeptidepy/
2023-02-24T21:06:37,600 * https://www.piwheels.org/simple/glycopeptidepy/
2023-02-24T21:06:37,601 Fetching project page and analyzing links: https://pypi.org/simple/glycopeptidepy/
2023-02-24T21:06:37,601 Getting page https://pypi.org/simple/glycopeptidepy/
2023-02-24T21:06:37,603 Found index url https://pypi.org/simple
2023-02-24T21:06:37,657 Fetched page https://pypi.org/simple/glycopeptidepy/ as application/vnd.pypi.simple.v1+json
2023-02-24T21:06:37,685   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c5/11/eb274d11f4af75f9ac7af58e6ebdc583aea6b01dded7b435087941f16dab/glycopeptidepy-0.0.8-py2.7-win-amd64.egg (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,686   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9e/b8/7b13b5d9a0514c91b0a75ec641e8ccf20fa82ce07baabeff879d3d77a123/glycopeptidepy-0.0.9-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,686   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c4/0b/96db41cababc1eba081cc4c724a9020ab1ef7c91334ac8690ee53540d0e0/glycopeptidepy-0.0.9-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,686   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/0b/d4/f34abe10292754143bf1ecafe6eed20805461c373618212cf1c4ae77ad61/glycopeptidepy-0.0.9-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,686   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/05/7a/a0aa008ddc1fb6fd7e3eca6732e6f5bbcedab39aad7005e1fe59b88aa14c/glycopeptidepy-0.0.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,686   Found link https://files.pythonhosted.org/packages/e1/2c/c4fb4ba198007046e66a5cc18ee1db01e46e453feb59a4149f8c590e550c/glycopeptidepy-0.0.9.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.9
2023-02-24T21:06:37,687   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/ec/53/842ed5b412b030004b831e6927250cdcb0bc1168dd3611ae00a134374b26/glycopeptidepy-0.0.10-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,687   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/98/f1/09c02877e80b6e451dd103c4738d3c26e7280029ceebc7a24ed1ec6b53fb/glycopeptidepy-0.0.10-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,687   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/95/7f/e8e0c6e49e826c913f1a9ab96e0712bf8ec5d43bdd8ec505764eb3ed158c/glycopeptidepy-0.0.10-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,687   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/30/e1/e33561730d84685829b63b88f22431268ec44f97977ea4bc82d4094bb53c/glycopeptidepy-0.0.10-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,688   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b2/ec/6bc59c55fa5b269abbe05a23ccbe62aafdc775faed7f029c9716c80efd32/glycopeptidepy-0.0.10-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,688   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b9/d1/5ff5cb8bed68162e4935cd6a0e08a1c6c6fd1d66c0b23b3f76c56a9f196c/glycopeptidepy-0.0.10-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,688   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/e1/26/f8ddb0b9733f46ca4bc5be43c414f92a42f75548b46a53f5d591775230f9/glycopeptidepy-0.0.10-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,688   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fe/df/c84ddc0792f910d6fb51653200c47c2c0640a4536bc3c6640f17d6f1eebe/glycopeptidepy-0.0.11-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,689   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9f/6f/2f39e13a3c1608105be10209c0d9531b6cb9ad1892940a34352d490dff4d/glycopeptidepy-0.0.11-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,689   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/89/9c/2cc74edae53140509a8f2a6f30e4d7f6ee1daab463e8671f50f49ce58b23/glycopeptidepy-0.0.11-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,689   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/d4/df/b4a6690634f65bf1da0aa278fabb6eb4ca53856d0dc1f288953345a4ff87/glycopeptidepy-0.0.11-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,689   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/dd/df/db6a0c4e47f942a7e739e6a9e7e9aa4c0934fccd8016677ceb4a1b044db5/glycopeptidepy-0.0.11-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,689   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/f4/9b/1d15adc403ef4f712ff1e74d56ad90b51e1bd95f64b5beffbe3037ba7876/glycopeptidepy-0.0.11-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,690   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fc/4d/d88cefab11cf4d38f888190dd9b2b8baa3317a0626592a0bc880017e772f/glycopeptidepy-0.0.11-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,690   Found link https://files.pythonhosted.org/packages/d7/f9/c7f7e7925947e0f2bd174d5bf7c3a93ab818d3803197c752b96a740c5bcc/glycopeptidepy-0.0.11.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.11
2023-02-24T21:06:37,690   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/45/49/ad5af8de14295e63934209845a78d584ba2a6b398a05e6b9daf9c3399984/glycopeptidepy-0.0.12-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,690   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/22/88/a6bba5af3ee627663e40f92665e5bc4081ba70af7da7747bfde059cc05ae/glycopeptidepy-0.0.12-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,691   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b3/30/8c292fd979f741b66941d2465ae660031fa5b9d9ad58ec231f7c06a9715e/glycopeptidepy-0.0.12-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,691   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a1/4f/b94e0b02ff32d2719a902060fd0c1065502ce924bcc9c8c252b15c55791b/glycopeptidepy-0.0.12-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,691   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/e5/6b/d2c15b41d7380dfe1549d0ee6ee7bbbd5cf34bbea7702b5349b871af6c60/glycopeptidepy-0.0.12-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,691   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/2c/af/134f748fd8db60ab32b2839b80bb367b921ec828eec5989ce30f557e0d49/glycopeptidepy-0.0.12-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,691   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c1/9d/1a5873cc1d80b8f082f286137634b76341037db7370caf2f2672901be2df/glycopeptidepy-0.0.12-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,692   Found link https://files.pythonhosted.org/packages/2c/39/dc349656bb780f702d0d7cead9a14420bf8896b9aaf47d266bff3d0d3b20/glycopeptidepy-0.0.12.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.12
2023-02-24T21:06:37,692   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/cb/3b/2188663ffb5404fb0d3f88a52c08b2260e6bcf35c25ca17a1b8f980c611d/glycopeptidepy-0.0.13-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,692   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/84/03/4b94b841e7920e618ec4eaebde248e63b7f03718d92b0f631d165876e3c9/glycopeptidepy-0.0.13-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,692   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4d/b7/81638aba7c13b0899d02efb7467c380499e5fc25ce4a2f0c76ef14e13f2f/glycopeptidepy-0.0.13-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,692   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4d/06/f58c0a8d13fb9a5a7ae5c3909296ae5b160549af8190eb5795b47c5c6e16/glycopeptidepy-0.0.13-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,693   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/b1/9c/cb0e3ab6e57a95633847956fb445852aaa35c35e39b5690699f8d958971f/glycopeptidepy-0.0.13-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,693   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/54/be/9bb68a1146ddc8041ec56ba8bd046a3a87bf1efe24019e7c33603c2045b4/glycopeptidepy-0.0.13-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,693   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/3b/ba/2235687d009b637ca4a07879476e61604bd4926ed81846089588d5c5e71b/glycopeptidepy-0.0.13-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,693   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/59/d8/4e07b4fd6da69338056734679d9f29b82e36421489437d3bfecf045beb64/glycopeptidepy-0.0.13-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,694   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/3f/59/0420f3f172f2377b6f0bc46cb95706e03a3ed5a38d35f27a47ca1ab38b0d/glycopeptidepy-0.0.14-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,694   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/15/ab/3b822a52a18d0187897787888fdc622c9de7cfd04ab81cf6120fece14b69/glycopeptidepy-0.0.14-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,694   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/52/5d/86f6bb97f4aecd3e731ff17f893f92b918781cd970b8b51617b2b85555ac/glycopeptidepy-0.0.14-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,694   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/d6/02/2bc7b83b513bf0068c0aefa77736713990892045c404e91cf22bc64f47ef/glycopeptidepy-0.0.14-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,694   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/fc/61/3f94619c9d735e5301a2382f367e4687e681de1bb08d9a4e4db0a34fb790/glycopeptidepy-0.0.14-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,695   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/2d/7f/a01c05b32818abea951f0fed1ea1f47cb2b916fc38be8a9079044a070aab/glycopeptidepy-0.0.14-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,695   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/93/7c/ef42f13b8f485a0920c61c8e5c16b78251eac30a97d3a8bd415c0dc83097/glycopeptidepy-0.0.14-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,695   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/98/72/04c775104bb27eb168ff8bc2fa51b5b9719791df67f44b5be6e55c907717/glycopeptidepy-0.0.14-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,696   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9a/45/4d5981031ebe59829dc0378c0b2a75cb6a0dbe1a11305e361f3df9b8a69f/glycopeptidepy-0.0.15-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,696   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/bc/c4/4926f1ad1af46ebb08098cb25d7b22fa4ead4dd6e855bf02fac3ed8799be/glycopeptidepy-0.0.15-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,710   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/85/a0/892f4835af3e7e4e01c41ca71aa6e68b77119774098e905ac2f64fd32bcc/glycopeptidepy-0.0.22-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,710   Found link https://files.pythonhosted.org/packages/44/2e/d0285cf3423f12619dcf8aafe32280a08b2ff1ce9debe15a5a27b030e2d4/glycopeptidepy-0.0.22.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.22
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2023-02-24T21:06:37,711   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/79/34/196cdde05c51e178dd30584db51bbd009d1e10ea9e21c4f3a7b5dc9f42fe/glycopeptidepy-0.0.23-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,711   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/5c/13/4f5b37c9025121d267d75ca7be07f783ae4baf2dd3f2c6d2c940ede4d79c/glycopeptidepy-0.0.23-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,712   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4f/12/d6a44435afcb78c3299d3134b32a6c3610b440e3fa6069824136cf44fa1f/glycopeptidepy-0.0.23-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,712   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/32/9e/ed1e9c0fde06668122dd2d63ef8d0f90651439dadd526d0f15c986eedaed/glycopeptidepy-0.0.23-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,712   Found link https://files.pythonhosted.org/packages/33/21/3f1e97b40d2c1cdbdfbe013202fde94876f7159e26f83de603c800beb97d/glycopeptidepy-0.0.23.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.23
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2023-02-24T21:06:37,713   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/c6/a4/db29affbe1118a1f7f863343de1b3b6a7ebac9b4152cd165ad93ae0069ef/glycopeptidepy-0.0.24-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,713   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/7f/55/945d34f68a72780e5d5c6fca916f70865df688f0ddb3002b580065a491e9/glycopeptidepy-0.0.24-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,714   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a1/6e/ce9857256412badaabda449e6932942b883b434c136ea0329a1442ec316c/glycopeptidepy-0.0.24-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,714   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/50/13/4baa1621adb411ffca69c739e45e1902688ce841a80fdf0862c5cf33f1ee/glycopeptidepy-0.0.24-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,714   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/da/5e/a44874144a1e7cc75444b8ac9bcafe9ab5f5ef81815dd333a04c158433e9/glycopeptidepy-0.0.24-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,714   Found link https://files.pythonhosted.org/packages/84/ad/684ca86acc70eb60aebf852dffece7e8b27128b1a2df2b1814a19f1ac95b/glycopeptidepy-0.0.24.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.24
2023-02-24T21:06:37,715   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/a1/ad/2300bf54a040307ba7fd46b64087073d347e9659b1beabd8ef68472ba335/glycopeptidepy-0.0.25-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,715   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/df/e3/ff3f36bf531536d610af586eed9abeaaa721391b20d7af9581c497feb45b/glycopeptidepy-0.0.25-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,715   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/58/3a/a6430a85c669e0bd53276fb4610fe1a3bdab463ec5900cabde21bccc11b6/glycopeptidepy-0.0.25-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,715   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/9d/71/458df43e058712cdca6a4aefb35747ff0758a2f79a43d3e4e78f558268d2/glycopeptidepy-0.0.25-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,715   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/1d/b8/e19c4a00ba616977a5b803ab85959aebe41553996cda0dc3214e46b2b4cd/glycopeptidepy-0.0.25-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,716   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/84/0c/454ce1fbcb0160da2b1d51019470a48140300572480213192615a12cd1fb/glycopeptidepy-0.0.25-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,716   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/4f/96/922799d763ee95b48e2869c1b3bedb392a3dc912175513ef037c82dcfc39/glycopeptidepy-0.0.25-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,716   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/77/e3/8b67ba1a6aefe827423e7dddcbbcdcf853b018432f35ffbccca582141866/glycopeptidepy-0.0.25-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,716   Skipping link: No binaries permitted for glycopeptidepy: https://files.pythonhosted.org/packages/34/e0/369372e1bcd4bc7234b29e7e30c7cf5bc09f2ed41560d3ef6cbe4fcb8f67/glycopeptidepy-0.0.25-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,716   Found link https://files.pythonhosted.org/packages/69/68/e57bf05db279997551045e493a4a5ddcba61a01c95afe46732815035cb86/glycopeptidepy-0.0.25.tar.gz (from https://pypi.org/simple/glycopeptidepy/), version: 0.0.25
2023-02-24T21:06:37,717 Fetching project page and analyzing links: https://www.piwheels.org/simple/glycopeptidepy/
2023-02-24T21:06:37,717 Getting page https://www.piwheels.org/simple/glycopeptidepy/
2023-02-24T21:06:37,718 Found index url https://www.piwheels.org/simple
2023-02-24T21:06:37,874 Fetched page https://www.piwheels.org/simple/glycopeptidepy/ as text/html
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2023-02-24T21:06:37,897   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.25-cp37-cp37m-linux_armv6l.whl#sha256=e0f1dc6fc6901524ccdc9298776a20b5a69634897138581e46c12b0ca9096278 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,897   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp39-cp39-linux_armv7l.whl#sha256=2cfb05670bd69b51772cadb47b9669034ac0a934ed1b4565a4d92246147154f9 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,897   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp39-cp39-linux_armv6l.whl#sha256=2cfb05670bd69b51772cadb47b9669034ac0a934ed1b4565a4d92246147154f9 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,897   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp37-cp37m-linux_armv7l.whl#sha256=d10d858431fa4364f90a2b9df118d9444e5e6aa98cda4334c1f7ea4be429e8e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,897   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.24-cp37-cp37m-linux_armv6l.whl#sha256=d10d858431fa4364f90a2b9df118d9444e5e6aa98cda4334c1f7ea4be429e8e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,898   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp39-cp39-linux_armv7l.whl#sha256=67e0afedfc7209235ed5db24eb6fdf9258c11aed45cdeffe86d7a45025dbc2e6 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,898   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.23-cp37-cp37m-linux_armv6l.whl#sha256=661bb6490daa95f5b30d4a4e6e50b44b656b3cff3d13290eed019e1c830c682e (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,898   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.22-cp39-cp39-linux_armv7l.whl#sha256=565917cd38ef20d058dda0b44d75e2f83b948f70478703b24f1c1685befc51d9 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,904   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.16-cp39-cp39-linux_armv7l.whl#sha256=6874a32b28b0de3754e7f1543b1a51cd3ea261fceb3cec8a8085ea8b75ebd35c (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.15-cp35-cp35m-linux_armv6l.whl#sha256=dc6ef47fb777209448555d16d0379766fbe9904e37ed4e037dfed0f8b5c9874b (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,906   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.14-cp39-cp39-linux_armv7l.whl#sha256=673f25f64d565aea8a7d1358246f05a6d2f5c4344d4fa7df09a583cb8de2a5c7 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,907   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.13-cp39-cp39-linux_armv7l.whl#sha256=82a14e27b987899e3c2b3b9a1067477a1061634fa7a015d58e27eff8a19e6315 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.13-cp37-cp37m-linux_armv6l.whl#sha256=a8b33a444a9eed9e6736f5f912eef34a13d4b67b44a660166b8bfad7a4d76a36 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.13-cp35-cp35m-linux_armv7l.whl#sha256=0fdae69c935e00fe0d6db429553cd811cbf441199626115a279eed4c8dbd7e35 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp39-cp39-linux_armv7l.whl#sha256=58c5d004a4f72fdc6688396f208f795daadfa79643c9220a93621cfb82df3b06 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,908   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp39-cp39-linux_armv6l.whl#sha256=58c5d004a4f72fdc6688396f208f795daadfa79643c9220a93621cfb82df3b06 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp37-cp37m-linux_armv7l.whl#sha256=f44e753f425a28833c6ae79b41401e2c5fac36302aea0c2a376e7c2447ca7993 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp37-cp37m-linux_armv6l.whl#sha256=f44e753f425a28833c6ae79b41401e2c5fac36302aea0c2a376e7c2447ca7993 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp35-cp35m-linux_armv7l.whl#sha256=528efb8cef6c4e77bbea7b6d3558caa9e290c266ad3b1c36a90fdee4108b69a8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.12-cp35-cp35m-linux_armv6l.whl#sha256=528efb8cef6c4e77bbea7b6d3558caa9e290c266ad3b1c36a90fdee4108b69a8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,909   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.11-cp39-cp39-linux_armv7l.whl#sha256=a555b804f33290b7294d8f46ae18345ce11e666ce1a8a12613892a61f05928a5 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,910   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.11-cp37-cp37m-linux_armv7l.whl#sha256=cbc59c2f6cbed8fcae4021d81371dbf656d5bf0727116b76996d517b4cc92773 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,910   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.11-cp37-cp37m-linux_armv6l.whl#sha256=cbc59c2f6cbed8fcae4021d81371dbf656d5bf0727116b76996d517b4cc92773 (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,910   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.10-cp39-cp39-linux_armv7l.whl#sha256=c021e99b73c9666b181c9dd63ac9d39f19ef71c9697048d57ccb8286137282ff (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,911   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.10-cp39-cp39-linux_armv6l.whl#sha256=c021e99b73c9666b181c9dd63ac9d39f19ef71c9697048d57ccb8286137282ff (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,911   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.10-cp35-cp35m-linux_armv7l.whl#sha256=4945c8721ffb13f91738a4a21977110625ea7035f4dceecfc12ff163494351bd (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,912   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp39-cp39-linux_armv7l.whl#sha256=0fe3f95737f2249e76bb8a5232177acd2755d76b4e90ee0cd51e81318a5248be (from https://www.piwheels.org/simple/glycopeptidepy/)
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2023-02-24T21:06:37,912   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp37-cp37m-linux_armv7l.whl#sha256=6ae840262993fd30d3cc9886ab9c084101c73d2fe5ff93f6790e38e23c8c45e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,912   Skipping link: No binaries permitted for glycopeptidepy: https://www.piwheels.org/simple/glycopeptidepy/glycopeptidepy-0.0.9-cp37-cp37m-linux_armv6l.whl#sha256=6ae840262993fd30d3cc9886ab9c084101c73d2fe5ff93f6790e38e23c8c45e8 (from https://www.piwheels.org/simple/glycopeptidepy/)
2023-02-24T21:06:37,912 Skipping link: not a file: https://www.piwheels.org/simple/glycopeptidepy/
2023-02-24T21:06:37,913 Skipping link: not a file: https://pypi.org/simple/glycopeptidepy/
2023-02-24T21:06:37,933 Given no hashes to check 1 links for project 'glycopeptidepy': discarding no candidates
2023-02-24T21:06:37,950 Collecting glycopeptidepy==0.0.25
2023-02-24T21:06:37,952   Created temporary directory: /tmp/pip-unpack-sfnhau_w
2023-02-24T21:06:38,018   Downloading glycopeptidepy-0.0.25.tar.gz (1.4 MB)
2023-02-24T21:06:38,904   Added glycopeptidepy==0.0.25 from https://files.pythonhosted.org/packages/69/68/e57bf05db279997551045e493a4a5ddcba61a01c95afe46732815035cb86/glycopeptidepy-0.0.25.tar.gz to build tracker '/tmp/pip-build-tracker-vy4yrwzo'
2023-02-24T21:06:38,909   Created temporary directory: /tmp/pip-build-env-x915i3ol
2023-02-24T21:06:38,920   Installing build dependencies: started
2023-02-24T21:06:38,921   Running command pip subprocess to install build dependencies
2023-02-24T21:06:40,121   Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-02-24T21:06:40,696   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-24T21:06:40,723   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-24T21:06:42,417   Collecting setuptools
2023-02-24T21:06:42,518     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB)
2023-02-24T21:06:42,781   Collecting wheel
2023-02-24T21:06:42,802     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-02-24T21:06:44,166   Collecting Cython
2023-02-24T21:06:44,687     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-02-24T21:06:45,084   Collecting glypy
2023-02-24T21:06:45,136     Downloading https://www.piwheels.org/simple/glypy/glypy-1.0.7-cp39-cp39-linux_armv7l.whl (1.5 MB)
2023-02-24T21:06:45,304        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.5/1.5 MB 9.4 MB/s eta 0:00:00
2023-02-24T21:06:45,492   Collecting hjson
2023-02-24T21:06:45,563     Downloading https://www.piwheels.org/simple/hjson/hjson-3.1.0-py3-none-any.whl (54 kB)
2023-02-24T21:06:45,594        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 54.0/54.0 kB 2.0 MB/s eta 0:00:00
2023-02-24T21:06:45,733   Collecting six
2023-02-24T21:06:45,751     Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB)
2023-02-24T21:06:47,623   Installing collected packages: hjson, wheel, six, setuptools, Cython, glypy
2023-02-24T21:06:47,874     Creating /tmp/pip-build-env-x915i3ol/overlay/bin
2023-02-24T21:06:47,877     changing mode of /tmp/pip-build-env-x915i3ol/overlay/bin/hjson to 755
2023-02-24T21:06:48,025     changing mode of /tmp/pip-build-env-x915i3ol/overlay/bin/wheel to 755
2023-02-24T21:06:53,142     changing mode of /tmp/pip-build-env-x915i3ol/overlay/bin/cygdb to 755
2023-02-24T21:06:53,145     changing mode of /tmp/pip-build-env-x915i3ol/overlay/bin/cython to 755
2023-02-24T21:06:53,148     changing mode of /tmp/pip-build-env-x915i3ol/overlay/bin/cythonize to 755
2023-02-24T21:06:54,534   Successfully installed Cython-0.29.33 glypy-1.0.7 hjson-3.1.0 setuptools-67.4.0 six-1.16.0 wheel-0.38.4
2023-02-24T21:06:55,096   Installing build dependencies: finished with status 'done'
2023-02-24T21:06:55,109   Getting requirements to build wheel: started
2023-02-24T21:06:55,110   Running command Getting requirements to build wheel
2023-02-24T21:06:57,395   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/base.pxd
2023-02-24T21:06:57,396     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:06:58,539   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/fragment.pxd
2023-02-24T21:06:58,539     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:01,027   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd
2023-02-24T21:07:01,028     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:02,222   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd
2023-02-24T21:07:02,222     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:04,779   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd
2023-02-24T21:07:04,779     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:09,417   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/glycan.pxd
2023-02-24T21:07:09,417     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:10,743   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/modification/rule.pxd
2023-02-24T21:07:10,744     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:11,310   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/sequence_methods.pxd
2023-02-24T21:07:11,311     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:13,161   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/algorithm.pyx
2023-02-24T21:07:13,161     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:13,850   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/collectiontools.pxd
2023-02-24T21:07:13,850     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:15,025   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/count_table.pxd
2023-02-24T21:07:15,025     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:17,004   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/parser.pxd
2023-02-24T21:07:17,004     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:18,214   warning: src/glycopeptidepy/_c/parser.pyx:224:23: Unreachable code
2023-02-24T21:07:18,460   /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7/src/glycopeptidepy/_c/structure/modification/source.pxd
2023-02-24T21:07:18,461     tree = Parsing.p_module(s, pxd, full_module_name)
2023-02-24T21:07:18,930   Compiling src/glycopeptidepy/_c/collectiontools.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-24T21:07:18,930   Compiling src/glycopeptidepy/_c/count_table.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/parser.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/base.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/fragment.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/glycan.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/sequence_methods.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/modification/rule.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/utils/cenum.pxd.
2023-02-24T21:07:18,931   Compiling src/glycopeptidepy/_c/structure/modification/source.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-24T21:07:18,932   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,932   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,932   Compiling src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/glypy/composition/ccomposition.pxd.
2023-02-24T21:07:18,932   Compiling src/glycopeptidepy/_c/algorithm.pyx because it depends on /tmp/pip-build-env-x915i3ol/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-02-24T21:07:18,932   [ 1/13] Cythonizing src/glycopeptidepy/_c/structure/base.pyx
2023-02-24T21:07:18,932   [ 2/13] Cythonizing src/glycopeptidepy/_c/structure/fragment.pyx
2023-02-24T21:07:18,932   [ 3/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx
2023-02-24T21:07:18,933   [ 4/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx
2023-02-24T21:07:18,933   [ 5/13] Cythonizing src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx
2023-02-24T21:07:18,933   [ 6/13] Cythonizing src/glycopeptidepy/_c/structure/glycan.pyx
2023-02-24T21:07:18,933   [ 7/13] Cythonizing src/glycopeptidepy/_c/structure/modification/rule.pyx
2023-02-24T21:07:18,933   [ 8/13] Cythonizing src/glycopeptidepy/_c/structure/sequence_methods.pyx
2023-02-24T21:07:18,933   [ 9/13] Cythonizing src/glycopeptidepy/_c/algorithm.pyx
2023-02-24T21:07:18,933   [10/13] Cythonizing src/glycopeptidepy/_c/collectiontools.pyx
2023-02-24T21:07:18,934   [11/13] Cythonizing src/glycopeptidepy/_c/count_table.pyx
2023-02-24T21:07:18,934   [12/13] Cythonizing src/glycopeptidepy/_c/parser.pyx
2023-02-24T21:07:18,934   [13/13] Cythonizing src/glycopeptidepy/_c/structure/modification/source.pyx
2023-02-24T21:07:19,018   running egg_info
2023-02-24T21:07:19,024   writing src/glycopeptidepy.egg-info/PKG-INFO
2023-02-24T21:07:19,027   writing dependency_links to src/glycopeptidepy.egg-info/dependency_links.txt
2023-02-24T21:07:19,030   writing requirements to src/glycopeptidepy.egg-info/requires.txt
2023-02-24T21:07:19,031   writing top-level names to src/glycopeptidepy.egg-info/top_level.txt
2023-02-24T21:07:19,078   reading manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:19,084   reading manifest template 'MANIFEST.in'
2023-02-24T21:07:19,281   writing manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:19,777   Getting requirements to build wheel: finished with status 'done'
2023-02-24T21:07:19,792   Created temporary directory: /tmp/pip-modern-metadata-par0ox_k
2023-02-24T21:07:19,795   Preparing metadata (pyproject.toml): started
2023-02-24T21:07:19,796   Running command Preparing metadata (pyproject.toml)
2023-02-24T21:07:21,328   running dist_info
2023-02-24T21:07:21,353   creating /tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info
2023-02-24T21:07:21,359   writing /tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/PKG-INFO
2023-02-24T21:07:21,361   writing dependency_links to /tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/dependency_links.txt
2023-02-24T21:07:21,364   writing requirements to /tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/requires.txt
2023-02-24T21:07:21,365   writing top-level names to /tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/top_level.txt
2023-02-24T21:07:21,367   writing manifest file '/tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:21,400   reading manifest file '/tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:21,402   reading manifest template 'MANIFEST.in'
2023-02-24T21:07:21,606   writing manifest file '/tmp/pip-modern-metadata-par0ox_k/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:21,607   creating '/tmp/pip-modern-metadata-par0ox_k/glycopeptidepy-0.0.25.dist-info'
2023-02-24T21:07:21,913   Preparing metadata (pyproject.toml): finished with status 'done'
2023-02-24T21:07:21,920   Source in /tmp/pip-wheel-_158jku7/glycopeptidepy_3eb1078f85be48e8ad82dd564ee828a7 has version 0.0.25, which satisfies requirement glycopeptidepy==0.0.25 from https://files.pythonhosted.org/packages/69/68/e57bf05db279997551045e493a4a5ddcba61a01c95afe46732815035cb86/glycopeptidepy-0.0.25.tar.gz
2023-02-24T21:07:21,921   Removed glycopeptidepy==0.0.25 from https://files.pythonhosted.org/packages/69/68/e57bf05db279997551045e493a4a5ddcba61a01c95afe46732815035cb86/glycopeptidepy-0.0.25.tar.gz from build tracker '/tmp/pip-build-tracker-vy4yrwzo'
2023-02-24T21:07:21,926 Created temporary directory: /tmp/pip-unpack-s_mp8hir
2023-02-24T21:07:21,926 Building wheels for collected packages: glycopeptidepy
2023-02-24T21:07:21,931   Created temporary directory: /tmp/pip-wheel-btw9fezs
2023-02-24T21:07:21,931   Destination directory: /tmp/pip-wheel-btw9fezs
2023-02-24T21:07:21,934   Building wheel for glycopeptidepy (pyproject.toml): started
2023-02-24T21:07:21,935   Running command Building wheel for glycopeptidepy (pyproject.toml)
2023-02-24T21:07:23,536   running bdist_wheel
2023-02-24T21:07:23,555   running build
2023-02-24T21:07:23,555   running build_py
2023-02-24T21:07:23,565   creating build
2023-02-24T21:07:23,565   creating build/lib.linux-armv7l-cpython-39
2023-02-24T21:07:23,566   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-24T21:07:23,568   copying src/glycopeptidepy/algorithm.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-24T21:07:23,571   copying src/glycopeptidepy/version.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-24T21:07:23,573   copying src/glycopeptidepy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-24T21:07:23,574   copying src/glycopeptidepy/enzyme.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy
2023-02-24T21:07:23,578   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:23,578   copying src/glycopeptidepy/_c/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:23,580   copying src/glycopeptidepy/_c/cythonize.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:23,583   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,584   copying src/glycopeptidepy/structure/terminal_group.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,586   copying src/glycopeptidepy/structure/fragment.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,589   copying src/glycopeptidepy/structure/sequence_composition.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,592   copying src/glycopeptidepy/structure/parser.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,594   copying src/glycopeptidepy/structure/glycan.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,597   copying src/glycopeptidepy/structure/residue.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,600   copying src/glycopeptidepy/structure/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,602   copying src/glycopeptidepy/structure/composition.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,604   copying src/glycopeptidepy/structure/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,606   copying src/glycopeptidepy/structure/constants.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure
2023-02-24T21:07:23,608   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,609   copying src/glycopeptidepy/utils/intervals.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,612   copying src/glycopeptidepy/utils/iterators.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,614   copying src/glycopeptidepy/utils/sequence_tree.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,616   copying src/glycopeptidepy/utils/collectiontools.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,618   copying src/glycopeptidepy/utils/memoize.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,620   copying src/glycopeptidepy/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils
2023-02-24T21:07:23,623   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,624   copying src/glycopeptidepy/io/uniprot.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,628   copying src/glycopeptidepy/io/utils.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,630   copying src/glycopeptidepy/io/mzid.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,632   copying src/glycopeptidepy/io/annotation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,635   copying src/glycopeptidepy/io/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,636   copying src/glycopeptidepy/io/fasta.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,639   copying src/glycopeptidepy/io/nextprot.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io
2023-02-24T21:07:23,642   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-24T21:07:23,643   copying src/glycopeptidepy/test/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-24T21:07:23,644   copying src/glycopeptidepy/test/sequence_test_suite.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/test
2023-02-24T21:07:23,647   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:23,648   copying src/glycopeptidepy/_c/structure/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:23,651   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:23,652   copying src/glycopeptidepy/_c/structure/modification/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:23,654   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:23,655   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:23,657   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,658   copying src/glycopeptidepy/structure/modification/rule.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,662   copying src/glycopeptidepy/structure/modification/glycosylation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,664   copying src/glycopeptidepy/structure/modification/target.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,667   copying src/glycopeptidepy/structure/modification/descriptors.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,669   copying src/glycopeptidepy/structure/modification/utils.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,671   copying src/glycopeptidepy/structure/modification/source.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,673   copying src/glycopeptidepy/structure/modification/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,675   copying src/glycopeptidepy/structure/modification/modification.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification
2023-02-24T21:07:23,679   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:07:23,679   copying src/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:07:23,683   copying src/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:07:23,685   copying src/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:07:23,688   copying src/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:07:23,691   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,692   copying src/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,694   copying src/glycopeptidepy/structure/sequence/implementation.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,697   copying src/glycopeptidepy/structure/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,699   copying src/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,701   copying src/glycopeptidepy/structure/sequence/base.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence
2023-02-24T21:07:23,705   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:23,706   copying src/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:23,708   copying src/glycopeptidepy/structure/modification/data/unimod.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:23,711   copying src/glycopeptidepy/structure/modification/data/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:23,713   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-24T21:07:23,714   copying src/glycopeptidepy/io/cv/uniprot_ptm.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-24T21:07:23,717   copying src/glycopeptidepy/io/cv/term.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-24T21:07:23,719   copying src/glycopeptidepy/io/cv/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-24T21:07:23,721   copying src/glycopeptidepy/io/cv/peff.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv
2023-02-24T21:07:23,724   creating build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/data
2023-02-24T21:07:23,725   copying src/glycopeptidepy/io/cv/data/__init__.py -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/data
2023-02-24T21:07:23,727   running egg_info
2023-02-24T21:07:23,749   writing src/glycopeptidepy.egg-info/PKG-INFO
2023-02-24T21:07:23,750   writing dependency_links to src/glycopeptidepy.egg-info/dependency_links.txt
2023-02-24T21:07:23,752   writing requirements to src/glycopeptidepy.egg-info/requires.txt
2023-02-24T21:07:23,753   writing top-level names to src/glycopeptidepy.egg-info/top_level.txt
2023-02-24T21:07:23,773   reading manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:23,778   reading manifest template 'MANIFEST.in'
2023-02-24T21:07:23,988   writing manifest file 'src/glycopeptidepy.egg-info/SOURCES.txt'
2023-02-24T21:07:23,998   copying src/glycopeptidepy/_c/algorithm.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,011   copying src/glycopeptidepy/_c/algorithm.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,014   copying src/glycopeptidepy/_c/collectiontools.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,022   copying src/glycopeptidepy/_c/collectiontools.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,024   copying src/glycopeptidepy/_c/collectiontools.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,027   copying src/glycopeptidepy/_c/compat.h -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,029   copying src/glycopeptidepy/_c/compat.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,031   copying src/glycopeptidepy/_c/count_table.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,047   copying src/glycopeptidepy/_c/count_table.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,049   copying src/glycopeptidepy/_c/count_table.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,053   copying src/glycopeptidepy/_c/parser.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,064   copying src/glycopeptidepy/_c/parser.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,066   copying src/glycopeptidepy/_c/parser.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c
2023-02-24T21:07:24,068   copying src/glycopeptidepy/_c/structure/base.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,088   copying src/glycopeptidepy/_c/structure/base.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,090   copying src/glycopeptidepy/_c/structure/base.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,092   copying src/glycopeptidepy/_c/structure/constants.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,101   copying src/glycopeptidepy/_c/structure/constants.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,103   copying src/glycopeptidepy/_c/structure/constants.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,105   copying src/glycopeptidepy/_c/structure/fragment.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,135   copying src/glycopeptidepy/_c/structure/fragment.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,138   copying src/glycopeptidepy/_c/structure/fragment.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,141   copying src/glycopeptidepy/_c/structure/glycan.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,161   copying src/glycopeptidepy/_c/structure/glycan.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,163   copying src/glycopeptidepy/_c/structure/glycan.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,165   copying src/glycopeptidepy/_c/structure/sequence_methods.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,190   copying src/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,192   copying src/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure
2023-02-24T21:07:24,195   copying src/glycopeptidepy/_c/structure/modification/modification.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,205   copying src/glycopeptidepy/_c/structure/modification/modification.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,207   copying src/glycopeptidepy/_c/structure/modification/modification.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,210   copying src/glycopeptidepy/_c/structure/modification/rule.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,230   copying src/glycopeptidepy/_c/structure/modification/rule.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,232   copying src/glycopeptidepy/_c/structure/modification/rule.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,235   copying src/glycopeptidepy/_c/structure/modification/source.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,248   copying src/glycopeptidepy/_c/structure/modification/source.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,251   copying src/glycopeptidepy/_c/structure/modification/source.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,253   copying src/glycopeptidepy/_c/structure/modification/target.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification
2023-02-24T21:07:24,256   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,266   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,268   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,270   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,300   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,303   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,306   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,345   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,347   copying src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:07:24,350   copying src/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:24,353   copying src/glycopeptidepy/structure/modification/data/unimod.json -> build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data
2023-02-24T21:07:24,401   running build_ext
2023-02-24T21:07:24,406   building 'glycopeptidepy._c.collectiontools' extension
2023-02-24T21:07:24,407   creating build/temp.linux-armv7l-cpython-39
2023-02-24T21:07:24,407   creating build/temp.linux-armv7l-cpython-39/src
2023-02-24T21:07:24,408   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy
2023-02-24T21:07:24,409   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c
2023-02-24T21:07:24,410   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/collectiontools.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/collectiontools.o
2023-02-24T21:07:28,361   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/collectiontools.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:07:28,485   building 'glycopeptidepy._c.count_table' extension
2023-02-24T21:07:28,486   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/count_table.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/count_table.o
2023-02-24T21:07:29,392   src/glycopeptidepy/_c/count_table.c:2444:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_initialize_count_table_bin_freelist’ defined but not used [-Wunused-function]
2023-02-24T21:07:29,392    2444 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_initialize_count_table_bin_freelist(size_t __pyx_v_n, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_inst) {
2023-02-24T21:07:29,392         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-24T21:07:29,393   src/glycopeptidepy/_c/count_table.c:2186:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_get’ defined but not used [-Wunused-function]
2023-02-24T21:07:29,393    2186 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_get(struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_freelist, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin *__pyx_v_bin) {
2023-02-24T21:07:29,393         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-24T21:07:29,394   src/glycopeptidepy/_c/count_table.c:1956:12: warning: ‘__pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_put’ defined but not used [-Wunused-function]
2023-02-24T21:07:29,395    1956 | static int __pyx_f_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist_put(struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin_freelist *__pyx_v_freelist, struct __pyx_t_14glycopeptidepy_2_c_11count_table_count_table_bin *__pyx_v_bin) {
2023-02-24T21:07:29,395         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-02-24T21:07:37,084   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/count_table.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:07:37,222   building 'glycopeptidepy._c.parser' extension
2023-02-24T21:07:37,223   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/parser.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/parser.o
2023-02-24T21:07:37,544   In file included from src/glycopeptidepy/_c/parser.c:763:
2023-02-24T21:07:37,545   src/glycopeptidepy/_c/compat.h:38: warning: "PyInt_Check" redefined
2023-02-24T21:07:37,545      38 | #define PyInt_Check PyLong_Check
2023-02-24T21:07:37,545         |
2023-02-24T21:07:37,547   src/glycopeptidepy/_c/parser.c:670: note: this is the location of the previous definition
2023-02-24T21:07:37,547     670 |   #define PyInt_Check(op)              PyLong_Check(op)
2023-02-24T21:07:37,547         |
2023-02-24T21:07:37,547   In file included from src/glycopeptidepy/_c/parser.c:763:
2023-02-24T21:07:37,548   src/glycopeptidepy/_c/compat.h:39: warning: "PyInt_CheckExact" redefined
2023-02-24T21:07:37,548      39 | #define PyInt_CheckExact PyLong_CheckExact
2023-02-24T21:07:37,548         |
2023-02-24T21:07:37,548   src/glycopeptidepy/_c/parser.c:671: note: this is the location of the previous definition
2023-02-24T21:07:37,548     671 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
2023-02-24T21:07:37,548         |
2023-02-24T21:07:37,559   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_f_14glycopeptidepy_2_c_6parser__cstring_sequence_tokenizer’:
2023-02-24T21:07:37,560   src/glycopeptidepy/_c/parser.c:2004:21: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:37,560    2004 |   __pyx_v_csequence = PyStr_AsString(__pyx_v_sequence);
2023-02-24T21:07:37,560         |                     ^
2023-02-24T21:07:37,589   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_fuse_1__pyx_f_14glycopeptidepy_2_c_6parser__sequence_tokenizer’:
2023-02-24T21:07:37,591   src/glycopeptidepy/_c/parser.c:4494:66: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-24T21:07:37,592    4494 |             if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 295, __pyx_L1_error)
2023-02-24T21:07:37,592         |                                                                  ^~
2023-02-24T21:07:37,599   src/glycopeptidepy/_c/parser.c:4921:66: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-24T21:07:37,599    4921 |             if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 328, __pyx_L1_error)
2023-02-24T21:07:37,599         |                                                                  ^~
2023-02-24T21:07:37,603   src/glycopeptidepy/_c/parser.c:5127:64: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-24T21:07:37,604    5127 |           if (!(likely(PyList_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "list", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 344, __pyx_L1_error)
2023-02-24T21:07:37,604         |                                                                ^~
2023-02-24T21:07:37,615   src/glycopeptidepy/_c/parser.c: In function ‘__pyx_f_14glycopeptidepy_2_c_6parser_parse_simple’:
2023-02-24T21:07:37,618   src/glycopeptidepy/_c/parser.c:5990:23: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:37,618    5990 |     __pyx_v_csequence = PyStr_AsString(__pyx_v_sequence);
2023-02-24T21:07:37,618         |                       ^
2023-02-24T21:07:43,044   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/parser.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:07:43,164   building 'glycopeptidepy._c.structure.base' extension
2023-02-24T21:07:43,165   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure
2023-02-24T21:07:43,166   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/base.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/base.o
2023-02-24T21:07:55,332   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/base.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:07:55,486   building 'glycopeptidepy._c.structure.fragment' extension
2023-02-24T21:07:55,487   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragment.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragment.o
2023-02-24T21:07:55,806   In file included from src/glycopeptidepy/_c/structure/fragment.c:764:
2023-02-24T21:07:55,807   src/glycopeptidepy/_c/compat.h:38: warning: "PyInt_Check" redefined
2023-02-24T21:07:55,807      38 | #define PyInt_Check PyLong_Check
2023-02-24T21:07:55,807         |
2023-02-24T21:07:55,813   src/glycopeptidepy/_c/structure/fragment.c:670: note: this is the location of the previous definition
2023-02-24T21:07:55,813     670 |   #define PyInt_Check(op)              PyLong_Check(op)
2023-02-24T21:07:55,813         |
2023-02-24T21:07:55,814   In file included from src/glycopeptidepy/_c/structure/fragment.c:764:
2023-02-24T21:07:55,814   src/glycopeptidepy/_c/compat.h:39: warning: "PyInt_CheckExact" redefined
2023-02-24T21:07:55,814      39 | #define PyInt_CheckExact PyLong_CheckExact
2023-02-24T21:07:55,814         |
2023-02-24T21:07:55,814   src/glycopeptidepy/_c/structure/fragment.c:671: note: this is the location of the previous definition
2023-02-24T21:07:55,814     671 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
2023-02-24T21:07:55,814         |
2023-02-24T21:07:55,838   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_init_str_ints’:
2023-02-24T21:07:55,840   src/glycopeptidepy/_c/structure/fragment.c:3243:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,840    3243 |     __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
2023-02-24T21:07:55,840         |                   ^
2023-02-24T21:07:55,842   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_get_str_int’:
2023-02-24T21:07:55,843   src/glycopeptidepy/_c/structure/fragment.c:3472:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,843    3472 |   __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
2023-02-24T21:07:55,844         |                 ^
2023-02-24T21:07:55,948   src/glycopeptidepy/_c/structure/fragment.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_8fragment_15PeptideFragment_get_fragment_name’:
2023-02-24T21:07:55,954   src/glycopeptidepy/_c/structure/fragment.c:10375:22: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,954   10375 |   __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-24T21:07:55,954         |                      ^
2023-02-24T21:07:55,963   src/glycopeptidepy/_c/structure/fragment.c:10690:28: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,963   10690 |         __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-24T21:07:55,963         |                            ^
2023-02-24T21:07:55,969   src/glycopeptidepy/_c/structure/fragment.c:10864:28: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,970   10864 |         __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-24T21:07:55,970         |                            ^
2023-02-24T21:07:55,976   src/glycopeptidepy/_c/structure/fragment.c:11043:24: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
2023-02-24T21:07:55,976   11043 |     __pyx_v_tmp_buffer = PyStr_AsUTF8AndSize(((PyObject*)__pyx_t_2), (&__pyx_v_size_ref));
2023-02-24T21:07:55,976         |                        ^
2023-02-24T21:08:15,768   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragment.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:15,951   building 'glycopeptidepy._c.structure.constants' extension
2023-02-24T21:08:15,952   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/constants.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/constants.o
2023-02-24T21:08:19,078   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/constants.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:19,195   building 'glycopeptidepy._c.structure.glycan' extension
2023-02-24T21:08:19,195   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/glycan.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/glycan.o
2023-02-24T21:08:19,535   src/glycopeptidepy/_c/structure/glycan.c: In function ‘__pyx_fuse_0__pyx_f_14glycopeptidepy_2_c_9structure_6glycan_22GlycanCompositionProxy__create’:
2023-02-24T21:08:19,537   src/glycopeptidepy/_c/structure/glycan.c:2608:58: warning: self-comparison always evaluates to true [-Wtautological-compare]
2023-02-24T21:08:19,537    2608 |   if (!(likely(PyString_CheckExact(Py_None))||((Py_None) == Py_None)||((void)PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "str", Py_TYPE(Py_None)->tp_name), 0))) __PYX_ERR(0, 28, __pyx_L1_error)
2023-02-24T21:08:19,537         |                                                          ^~
2023-02-24T21:08:31,350   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/glycan.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:31,507   building 'glycopeptidepy._c.structure.sequence_methods' extension
2023-02-24T21:08:31,508   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/sequence_methods.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/sequence_methods.o
2023-02-24T21:08:32,006   src/glycopeptidepy/_c/structure/sequence_methods.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_16sequence_methods_add_modification’:
2023-02-24T21:08:32,012   src/glycopeptidepy/_c/structure/sequence_methods.c:11799:37: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-02-24T21:08:32,012   11799 |     __pyx_t_2 = ((__pyx_v_position_ >= ((struct __pyx_vtabstruct_14glycopeptidepy_2_c_9structure_16sequence_methods__PeptideSequenceCore *)__pyx_v_self->__pyx_base.__pyx_vtab)->get_size(__pyx_v_self)) != 0);
2023-02-24T21:08:32,013         |                                     ^~
2023-02-24T21:08:43,909   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/sequence_methods.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:44,064   building 'glycopeptidepy._c.structure.modification.rule' extension
2023-02-24T21:08:44,065   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification
2023-02-24T21:08:44,066   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/rule.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/rule.o
2023-02-24T21:08:51,808   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/rule.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:51,942   building 'glycopeptidepy._c.structure.modification.modification' extension
2023-02-24T21:08:51,943   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/modification.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/modification.o
2023-02-24T21:08:55,969   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/modification.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:08:56,099   building 'glycopeptidepy._c.structure.modification.source' extension
2023-02-24T21:08:56,100   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/modification/source.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/source.o
2023-02-24T21:09:00,356   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/modification/source.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:09:00,479   building 'glycopeptidepy._c.structure.fragmentation_strategy.base' extension
2023-02-24T21:09:00,480   creating build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:09:00,481   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.o
2023-02-24T21:09:04,565   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/base.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:09:04,686   building 'glycopeptidepy._c.structure.fragmentation_strategy.peptide' extension
2023-02-24T21:09:04,686   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.o
2023-02-24T21:09:32,461   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:09:32,682   building 'glycopeptidepy._c.structure.fragmentation_strategy.glycan' extension
2023-02-24T21:09:32,682   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.o
2023-02-24T21:09:33,142   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_fucosylate_extended’:
2023-02-24T21:09:33,148   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:9538:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare]
2023-02-24T21:09:33,148    9538 |   for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-02-24T21:09:33,148         |                                   ^
2023-02-24T21:09:33,153   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:9554:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare]
2023-02-24T21:09:33,154    9554 |   for (__pyx_t_10 = 1; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-02-24T21:09:33,154         |                                   ^
2023-02-24T21:09:33,237   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_n_glycan_stub_fragments’:
2023-02-24T21:09:33,244   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:13646:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-24T21:09:33,245   13646 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-24T21:09:33,245         |                                 ^
2023-02-24T21:09:33,257   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_o_glycan_stub_fragments’:
2023-02-24T21:09:33,265   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:14270:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2023-02-24T21:09:33,265   14270 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_13; __pyx_t_7+=1) {
2023-02-24T21:09:33,265         |                                 ^
2023-02-24T21:09:33,277   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:14028:7: warning: variable ‘__pyx_t_15’ set but not used [-Wunused-but-set-variable]
2023-02-24T21:09:33,278   14028 |   int __pyx_t_15;
2023-02-24T21:09:33,278         |       ^~~~~~~~~~
2023-02-24T21:09:33,309   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_gag_linker_stub_fragments’:
2023-02-24T21:09:33,318   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:16077:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2023-02-24T21:09:33,318   16077 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_13; __pyx_t_7+=1) {
2023-02-24T21:09:33,318         |                                 ^
2023-02-24T21:09:33,332   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:15835:7: warning: variable ‘__pyx_t_15’ set but not used [-Wunused-but-set-variable]
2023-02-24T21:09:33,332   15835 |   int __pyx_t_15;
2023-02-24T21:09:33,332         |       ^~~~~~~~~~
2023-02-24T21:09:33,358   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c: In function ‘__pyx_f_14glycopeptidepy_2_c_9structure_22fragmentation_strategy_6glycan_24StubGlycopeptideStrategy_mixed_stub_fragments’:
2023-02-24T21:09:33,368   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17329:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-24T21:09:33,368   17329 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-24T21:09:33,369         |                                 ^
2023-02-24T21:09:33,379   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17387:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-24T21:09:33,379   17387 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-24T21:09:33,379         |                                 ^
2023-02-24T21:09:33,390   src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c:17445:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-02-24T21:09:33,390   17445 |   for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-02-24T21:09:33,390         |                                 ^
2023-02-24T21:09:53,044   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:09:53,230   building 'glycopeptidepy._c.algorithm' extension
2023-02-24T21:09:53,231   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/glycopeptidepy/_c -I/usr/include/python3.9 -c src/glycopeptidepy/_c/algorithm.c -o build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/algorithm.o
2023-02-24T21:10:01,655   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/glycopeptidepy/_c/algorithm.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so
2023-02-24T21:10:01,823   installing to build/bdist.linux-armv7l/wheel
2023-02-24T21:10:01,823   running install
2023-02-24T21:10:01,850   running install_lib
2023-02-24T21:10:01,859   creating build/bdist.linux-armv7l
2023-02-24T21:10:01,859   creating build/bdist.linux-armv7l/wheel
2023-02-24T21:10:01,861   creating build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-24T21:10:01,863   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,864   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,889   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,898   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,901   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,903   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,907   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,909   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,920   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,928   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:01,943   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:01,944   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:01,947   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,948   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,950   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/target.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,952   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,961   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,963   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,973   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,974   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,976   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/source.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:01,986   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,000   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,008   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,009   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,011   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,014   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/modification/rule.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification
2023-02-24T21:10:02,028   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,030   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,031   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,034   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,036   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,039   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,050   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,053   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,083   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,086   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,088   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,090   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,098   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,129   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,168   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy
2023-02-24T21:10:02,204   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,206   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,208   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,210   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,230   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,239   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,258   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,291   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,293   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,295   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,298   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,321   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/fragment.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,375   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,377   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,398   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,417   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,418   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,420   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/sequence_methods.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,440   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/structure/constants.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure
2023-02-24T21:10:02,447   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/parser.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,449   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/count_table.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,466   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/compat.h -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,468   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,469   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,472   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/cythonize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,474   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,476   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/compat.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,478   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,497   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c
2023-02-24T21:10:02,508   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/algorithm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-24T21:10:02,511   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/version.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-24T21:10:02,513   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,514   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/terminal_group.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,517   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,518   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/rule.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,522   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/glycosylation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,525   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/target.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,528   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/descriptors.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,530   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,532   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/source.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,535   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,538   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,538   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,540   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,544   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,545   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,547   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/data/unimod.json -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data
2023-02-24T21:10:02,587   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/modification/modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification
2023-02-24T21:10:02,590   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:10:02,591   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:10:02,594   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:10:02,596   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:10:02,600   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy
2023-02-24T21:10:02,602   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,604   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,607   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/parser.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,609   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,612   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,615   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,616   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,618   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,620   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/constants.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure
2023-02-24T21:10:02,623   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,624   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,627   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/implementation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,629   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,631   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,634   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/structure/sequence/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence
2023-02-24T21:10:02,637   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-24T21:10:02,639   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,640   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,643   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/iterators.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,645   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/sequence_tree.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,648   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/collectiontools.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,650   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/memoize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,652   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils
2023-02-24T21:10:02,654   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,656   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-24T21:10:02,657   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-24T21:10:02,659   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/term.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-24T21:10:02,662   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-24T21:10:02,664   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv/data
2023-02-24T21:10:02,665   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/data/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv/data
2023-02-24T21:10:02,667   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/cv/peff.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv
2023-02-24T21:10:02,669   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,672   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,675   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/mzid.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,677   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/annotation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,680   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,681   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,684   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/io/nextprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io
2023-02-24T21:10:02,686   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy
2023-02-24T21:10:02,690   creating build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-24T21:10:02,690   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/test/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-24T21:10:02,692   copying build/lib.linux-armv7l-cpython-39/glycopeptidepy/test/sequence_test_suite.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test
2023-02-24T21:10:02,695   running install_egg_info
2023-02-24T21:10:02,708   Copying src/glycopeptidepy.egg-info to build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.25-py3.9.egg-info
2023-02-24T21:10:02,723   running install_scripts
2023-02-24T21:10:02,772   creating build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.25.dist-info/WHEEL
2023-02-24T21:10:02,776   creating '/tmp/pip-wheel-btw9fezs/.tmp-c41jvyy_/glycopeptidepy-0.0.25-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-02-24T21:10:02,778   adding 'glycopeptidepy/__init__.py'
2023-02-24T21:10:02,781   adding 'glycopeptidepy/algorithm.py'
2023-02-24T21:10:02,783   adding 'glycopeptidepy/enzyme.py'
2023-02-24T21:10:02,785   adding 'glycopeptidepy/version.py'
2023-02-24T21:10:02,787   adding 'glycopeptidepy/_c/__init__.py'
2023-02-24T21:10:02,827   adding 'glycopeptidepy/_c/algorithm.c'
2023-02-24T21:10:02,960   adding 'glycopeptidepy/_c/algorithm.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:02,965   adding 'glycopeptidepy/_c/algorithm.pyx'
2023-02-24T21:10:02,991   adding 'glycopeptidepy/_c/collectiontools.c'
2023-02-24T21:10:03,050   adding 'glycopeptidepy/_c/collectiontools.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:03,054   adding 'glycopeptidepy/_c/collectiontools.pxd'
2023-02-24T21:10:03,055   adding 'glycopeptidepy/_c/collectiontools.pyx'
2023-02-24T21:10:03,057   adding 'glycopeptidepy/_c/compat.h'
2023-02-24T21:10:03,058   adding 'glycopeptidepy/_c/compat.pxd'
2023-02-24T21:10:03,107   adding 'glycopeptidepy/_c/count_table.c'
2023-02-24T21:10:03,238   adding 'glycopeptidepy/_c/count_table.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:03,243   adding 'glycopeptidepy/_c/count_table.pxd'
2023-02-24T21:10:03,247   adding 'glycopeptidepy/_c/count_table.pyx'
2023-02-24T21:10:03,248   adding 'glycopeptidepy/_c/cythonize.py'
2023-02-24T21:10:03,279   adding 'glycopeptidepy/_c/parser.c'
2023-02-24T21:10:03,351   adding 'glycopeptidepy/_c/parser.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:03,355   adding 'glycopeptidepy/_c/parser.pxd'
2023-02-24T21:10:03,357   adding 'glycopeptidepy/_c/parser.pyx'
2023-02-24T21:10:03,359   adding 'glycopeptidepy/_c/structure/__init__.py'
2023-02-24T21:10:03,416   adding 'glycopeptidepy/_c/structure/base.c'
2023-02-24T21:10:03,603   adding 'glycopeptidepy/_c/structure/base.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:03,610   adding 'glycopeptidepy/_c/structure/base.pxd'
2023-02-24T21:10:03,612   adding 'glycopeptidepy/_c/structure/base.pyx'
2023-02-24T21:10:03,632   adding 'glycopeptidepy/_c/structure/constants.c'
2023-02-24T21:10:03,679   adding 'glycopeptidepy/_c/structure/constants.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:03,681   adding 'glycopeptidepy/_c/structure/constants.pxd'
2023-02-24T21:10:03,683   adding 'glycopeptidepy/_c/structure/constants.pyx'
2023-02-24T21:10:03,772   adding 'glycopeptidepy/_c/structure/fragment.c'
2023-02-24T21:10:04,067   adding 'glycopeptidepy/_c/structure/fragment.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:04,078   adding 'glycopeptidepy/_c/structure/fragment.pxd'
2023-02-24T21:10:04,081   adding 'glycopeptidepy/_c/structure/fragment.pyx'
2023-02-24T21:10:04,136   adding 'glycopeptidepy/_c/structure/glycan.c'
2023-02-24T21:10:04,322   adding 'glycopeptidepy/_c/structure/glycan.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:04,329   adding 'glycopeptidepy/_c/structure/glycan.pxd'
2023-02-24T21:10:04,331   adding 'glycopeptidepy/_c/structure/glycan.pyx'
2023-02-24T21:10:04,389   adding 'glycopeptidepy/_c/structure/sequence_methods.c'
2023-02-24T21:10:04,572   adding 'glycopeptidepy/_c/structure/sequence_methods.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:04,579   adding 'glycopeptidepy/_c/structure/sequence_methods.pxd'
2023-02-24T21:10:04,582   adding 'glycopeptidepy/_c/structure/sequence_methods.pyx'
2023-02-24T21:10:04,584   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py'
2023-02-24T21:10:04,611   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.c'
2023-02-24T21:10:04,674   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:04,677   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd'
2023-02-24T21:10:04,679   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx'
2023-02-24T21:10:04,765   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c'
2023-02-24T21:10:05,042   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:05,053   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd'
2023-02-24T21:10:05,057   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx'
2023-02-24T21:10:05,184   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c'
2023-02-24T21:10:05,560   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:05,573   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd'
2023-02-24T21:10:05,576   adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx'
2023-02-24T21:10:05,579   adding 'glycopeptidepy/_c/structure/modification/__init__.py'
2023-02-24T21:10:05,604   adding 'glycopeptidepy/_c/structure/modification/modification.c'
2023-02-24T21:10:05,668   adding 'glycopeptidepy/_c/structure/modification/modification.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:05,671   adding 'glycopeptidepy/_c/structure/modification/modification.pxd'
2023-02-24T21:10:05,672   adding 'glycopeptidepy/_c/structure/modification/modification.pyx'
2023-02-24T21:10:05,712   adding 'glycopeptidepy/_c/structure/modification/rule.c'
2023-02-24T21:10:05,832   adding 'glycopeptidepy/_c/structure/modification/rule.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:05,837   adding 'glycopeptidepy/_c/structure/modification/rule.pxd'
2023-02-24T21:10:05,839   adding 'glycopeptidepy/_c/structure/modification/rule.pyx'
2023-02-24T21:10:05,864   adding 'glycopeptidepy/_c/structure/modification/source.c'
2023-02-24T21:10:05,930   adding 'glycopeptidepy/_c/structure/modification/source.cpython-39-arm-linux-gnueabihf.so'
2023-02-24T21:10:05,934   adding 'glycopeptidepy/_c/structure/modification/source.pxd'
2023-02-24T21:10:05,935   adding 'glycopeptidepy/_c/structure/modification/source.pyx'
2023-02-24T21:10:05,936   adding 'glycopeptidepy/_c/structure/modification/target.pyx'
2023-02-24T21:10:05,938   adding 'glycopeptidepy/io/__init__.py'
2023-02-24T21:10:05,940   adding 'glycopeptidepy/io/annotation.py'
2023-02-24T21:10:05,945   adding 'glycopeptidepy/io/fasta.py'
2023-02-24T21:10:05,946   adding 'glycopeptidepy/io/mzid.py'
2023-02-24T21:10:05,948   adding 'glycopeptidepy/io/nextprot.py'
2023-02-24T21:10:05,951   adding 'glycopeptidepy/io/uniprot.py'
2023-02-24T21:10:05,952   adding 'glycopeptidepy/io/utils.py'
2023-02-24T21:10:05,954   adding 'glycopeptidepy/io/cv/__init__.py'
2023-02-24T21:10:05,956   adding 'glycopeptidepy/io/cv/peff.py'
2023-02-24T21:10:05,957   adding 'glycopeptidepy/io/cv/term.py'
2023-02-24T21:10:05,959   adding 'glycopeptidepy/io/cv/uniprot_ptm.py'
2023-02-24T21:10:05,961   adding 'glycopeptidepy/io/cv/data/__init__.py'
2023-02-24T21:10:05,963   adding 'glycopeptidepy/structure/__init__.py'
2023-02-24T21:10:05,964   adding 'glycopeptidepy/structure/base.py'
2023-02-24T21:10:05,965   adding 'glycopeptidepy/structure/composition.py'
2023-02-24T21:10:05,967   adding 'glycopeptidepy/structure/constants.py'
2023-02-24T21:10:05,969   adding 'glycopeptidepy/structure/fragment.py'
2023-02-24T21:10:05,972   adding 'glycopeptidepy/structure/glycan.py'
2023-02-24T21:10:05,974   adding 'glycopeptidepy/structure/parser.py'
2023-02-24T21:10:05,976   adding 'glycopeptidepy/structure/residue.py'
2023-02-24T21:10:05,978   adding 'glycopeptidepy/structure/sequence_composition.py'
2023-02-24T21:10:05,979   adding 'glycopeptidepy/structure/terminal_group.py'
2023-02-24T21:10:05,981   adding 'glycopeptidepy/structure/fragmentation_strategy/__init__.py'
2023-02-24T21:10:05,982   adding 'glycopeptidepy/structure/fragmentation_strategy/base.py'
2023-02-24T21:10:05,987   adding 'glycopeptidepy/structure/fragmentation_strategy/glycan.py'
2023-02-24T21:10:05,990   adding 'glycopeptidepy/structure/fragmentation_strategy/peptide.py'
2023-02-24T21:10:05,992   adding 'glycopeptidepy/structure/modification/__init__.py'
2023-02-24T21:10:05,994   adding 'glycopeptidepy/structure/modification/descriptors.py'
2023-02-24T21:10:05,996   adding 'glycopeptidepy/structure/modification/glycosylation.py'
2023-02-24T21:10:05,998   adding 'glycopeptidepy/structure/modification/modification.py'
2023-02-24T21:10:06,001   adding 'glycopeptidepy/structure/modification/rule.py'
2023-02-24T21:10:06,004   adding 'glycopeptidepy/structure/modification/source.py'
2023-02-24T21:10:06,006   adding 'glycopeptidepy/structure/modification/target.py'
2023-02-24T21:10:06,007   adding 'glycopeptidepy/structure/modification/utils.py'
2023-02-24T21:10:06,009   adding 'glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv'
2023-02-24T21:10:06,010   adding 'glycopeptidepy/structure/modification/data/__init__.py'
2023-02-24T21:10:06,011   adding 'glycopeptidepy/structure/modification/data/patch_unimod.py'
2023-02-24T21:10:06,079   adding 'glycopeptidepy/structure/modification/data/unimod.json'
2023-02-24T21:10:06,093   adding 'glycopeptidepy/structure/modification/data/unimod.py'
2023-02-24T21:10:06,095   adding 'glycopeptidepy/structure/sequence/__init__.py'
2023-02-24T21:10:06,097   adding 'glycopeptidepy/structure/sequence/base.py'
2023-02-24T21:10:06,099   adding 'glycopeptidepy/structure/sequence/glycosylated_sequence.py'
2023-02-24T21:10:06,101   adding 'glycopeptidepy/structure/sequence/implementation.py'
2023-02-24T21:10:06,103   adding 'glycopeptidepy/structure/sequence/mutable_sequence.py'
2023-02-24T21:10:06,105   adding 'glycopeptidepy/test/__init__.py'
2023-02-24T21:10:06,107   adding 'glycopeptidepy/test/sequence_test_suite.py'
2023-02-24T21:10:06,109   adding 'glycopeptidepy/utils/__init__.py'
2023-02-24T21:10:06,110   adding 'glycopeptidepy/utils/collectiontools.py'
2023-02-24T21:10:06,112   adding 'glycopeptidepy/utils/intervals.py'
2023-02-24T21:10:06,114   adding 'glycopeptidepy/utils/iterators.py'
2023-02-24T21:10:06,115   adding 'glycopeptidepy/utils/memoize.py'
2023-02-24T21:10:06,117   adding 'glycopeptidepy/utils/sequence_tree.py'
2023-02-24T21:10:06,119   adding 'glycopeptidepy-0.0.25.dist-info/METADATA'
2023-02-24T21:10:06,120   adding 'glycopeptidepy-0.0.25.dist-info/WHEEL'
2023-02-24T21:10:06,121   adding 'glycopeptidepy-0.0.25.dist-info/top_level.txt'
2023-02-24T21:10:06,123   adding 'glycopeptidepy-0.0.25.dist-info/RECORD'
2023-02-24T21:10:06,203   removing build/bdist.linux-armv7l/wheel
2023-02-24T21:10:06,412   Building wheel for glycopeptidepy (pyproject.toml): finished with status 'done'
2023-02-24T21:10:06,550   Created wheel for glycopeptidepy: filename=glycopeptidepy-0.0.25-cp39-cp39-linux_armv7l.whl size=5398006 sha256=3eb3e969ff28c29c606ff2bbd609b7d4e22356c85c2f8c9bc485e10e0da45874
2023-02-24T21:10:06,551   Stored in directory: /tmp/pip-ephem-wheel-cache-10gib6i6/wheels/74/36/23/245176dbf7585697f708b223cf6925b1c0a2d836960bc70a48
2023-02-24T21:10:06,569 Successfully built glycopeptidepy
2023-02-24T21:10:06,717 Removed build tracker: '/tmp/pip-build-tracker-vy4yrwzo'