2023-02-25T08:15:40,884 Created temporary directory: /tmp/pip-ephem-wheel-cache-zg7ww3t4 2023-02-25T08:15:40,887 Created temporary directory: /tmp/pip-build-tracker-ck7y7jeu 2023-02-25T08:15:40,887 Initialized build tracking at /tmp/pip-build-tracker-ck7y7jeu 2023-02-25T08:15:40,887 Created build tracker: /tmp/pip-build-tracker-ck7y7jeu 2023-02-25T08:15:40,888 Entered build tracker: /tmp/pip-build-tracker-ck7y7jeu 2023-02-25T08:15:40,888 Created temporary directory: /tmp/pip-wheel-rj93e0xv 2023-02-25T08:15:40,893 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-25T08:15:40,895 Created temporary directory: /tmp/pip-ephem-wheel-cache-cmnmvifp 2023-02-25T08:15:40,924 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-25T08:15:40,928 2 location(s) to search for versions of pyobo: 2023-02-25T08:15:40,928 * https://pypi.org/simple/pyobo/ 2023-02-25T08:15:40,928 * https://www.piwheels.org/simple/pyobo/ 2023-02-25T08:15:40,928 Fetching project page and analyzing links: https://pypi.org/simple/pyobo/ 2023-02-25T08:15:40,928 Getting page https://pypi.org/simple/pyobo/ 2023-02-25T08:15:40,930 Found index url https://pypi.org/simple 2023-02-25T08:15:40,984 Fetched page https://pypi.org/simple/pyobo/ as application/vnd.pypi.simple.v1+json 2023-02-25T08:15:41,002 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/98/5e/ad7ea3dab1d88562b4ccf8873bfab9c49117343adbead05aff3d31ab6bc9/pyobo-0.0.1-py3-none-any.whl 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2023-02-25T08:15:41,015 Found link https://files.pythonhosted.org/packages/17/72/9da15b783fda89d16e6b4e1b3002b1edef6a65258e8fb639609c0d3dfb41/pyobo-0.2.4.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.4 2023-02-25T08:15:41,015 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/03/40/0132f29aa34cdc8d3d625017621979f0cc783ce9f80d8cb04370417c6eb3/pyobo-0.2.5-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-02-25T08:15:41,016 Found link https://files.pythonhosted.org/packages/52/97/2812dd52233d4de0eb8da355bfab57f4dcd281edaaac1ef7a5d5bd0af83d/pyobo-0.2.5.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.5 2023-02-25T08:15:41,016 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/c0/b4/e473bd4bc0fe07387b7bdcc649a88c8908e974a7fc41d4258ca53750331f/pyobo-0.2.6-py3-none-any.whl (from https://pypi.org/simple/pyobo/) 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https://www.piwheels.org/simple/pyobo/pyobo-0.0.1-py3-none-any.whl#sha256=fa8b0bd5daff8df2ad48a133514a2b5fee29f18f806465ef49f7cc12042c4e51 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-02-25T08:15:41,257 Skipping link: not a file: https://www.piwheels.org/simple/pyobo/ 2023-02-25T08:15:41,258 Skipping link: not a file: https://pypi.org/simple/pyobo/ 2023-02-25T08:15:41,283 Given no hashes to check 1 links for project 'pyobo': discarding no candidates 2023-02-25T08:15:41,300 Collecting pyobo==0.8.11 2023-02-25T08:15:41,302 Created temporary directory: /tmp/pip-unpack-r9cm086t 2023-02-25T08:15:41,514 Downloading pyobo-0.8.11.tar.gz (23.1 MB) 2023-02-25T08:15:48,513 Added pyobo==0.8.11 from https://files.pythonhosted.org/packages/8a/78/051d75855d052c71d01e9d7fdf1f9e86e2da254ffda9c399edc1d3540f9f/pyobo-0.8.11.tar.gz to build tracker '/tmp/pip-build-tracker-ck7y7jeu' 2023-02-25T08:15:48,517 Created temporary directory: /tmp/pip-build-env-ca7p8y5i 2023-02-25T08:15:48,528 Installing build dependencies: started 2023-02-25T08:15:48,529 Running command pip subprocess to install build dependencies 2023-02-25T08:15:49,744 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-02-25T08:15:50,313 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-25T08:15:50,340 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-25T08:15:52,388 Collecting setuptools 2023-02-25T08:15:52,563 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB) 2023-02-25T08:15:52,896 Collecting wheel 2023-02-25T08:15:52,914 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-02-25T08:15:54,708 Installing collected packages: wheel, setuptools 2023-02-25T08:15:54,865 Creating /tmp/pip-build-env-ca7p8y5i/overlay/bin 2023-02-25T08:15:54,868 changing mode of /tmp/pip-build-env-ca7p8y5i/overlay/bin/wheel to 755 2023-02-25T08:15:57,149 Successfully installed setuptools-67.4.0 wheel-0.38.4 2023-02-25T08:15:57,629 Installing build dependencies: finished with status 'done' 2023-02-25T08:15:57,635 Getting requirements to build wheel: started 2023-02-25T08:15:57,636 Running command Getting requirements to build wheel 2023-02-25T08:15:58,244 /tmp/pip-build-env-ca7p8y5i/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-25T08:15:58,245 warnings.warn(msg, warning_class) 2023-02-25T08:15:58,439 running egg_info 2023-02-25T08:15:58,444 writing src/pyobo.egg-info/PKG-INFO 2023-02-25T08:15:58,448 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-02-25T08:15:58,451 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-02-25T08:15:58,454 writing requirements to src/pyobo.egg-info/requires.txt 2023-02-25T08:15:58,456 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-02-25T08:15:58,493 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:15:58,512 reading manifest template 'MANIFEST.in' 2023-02-25T08:15:58,530 no previously-included directories found matching 'benchmarking' 2023-02-25T08:15:58,532 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-25T08:15:58,613 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-25T08:15:58,615 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-25T08:15:58,617 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-25T08:15:58,619 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-25T08:15:58,620 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-25T08:15:58,622 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-25T08:15:58,623 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-25T08:15:58,624 warning: no previously-included files found matching 'Dockerfile' 2023-02-25T08:15:58,626 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-25T08:15:58,627 adding license file 'LICENSE' 2023-02-25T08:15:58,644 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:15:58,708 Getting requirements to build wheel: finished with status 'done' 2023-02-25T08:15:58,718 Created temporary directory: /tmp/pip-modern-metadata-7k13cspy 2023-02-25T08:15:58,721 Preparing metadata (pyproject.toml): started 2023-02-25T08:15:58,722 Running command Preparing metadata (pyproject.toml) 2023-02-25T08:15:59,346 /tmp/pip-build-env-ca7p8y5i/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-25T08:15:59,347 warnings.warn(msg, warning_class) 2023-02-25T08:15:59,374 running dist_info 2023-02-25T08:15:59,398 creating /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info 2023-02-25T08:15:59,402 writing /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/PKG-INFO 2023-02-25T08:15:59,406 writing dependency_links to /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/dependency_links.txt 2023-02-25T08:15:59,409 writing entry points to /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/entry_points.txt 2023-02-25T08:15:59,411 writing requirements to /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/requires.txt 2023-02-25T08:15:59,412 writing top-level names to /tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/top_level.txt 2023-02-25T08:15:59,413 writing manifest file '/tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:15:59,447 reading manifest file '/tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:15:59,449 reading manifest template 'MANIFEST.in' 2023-02-25T08:15:59,465 no previously-included directories found matching 'benchmarking' 2023-02-25T08:15:59,466 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-25T08:15:59,466 no previously-included directories found matching 'docs/source/api' 2023-02-25T08:15:59,542 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-25T08:15:59,543 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-25T08:15:59,544 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-25T08:15:59,546 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-25T08:15:59,547 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-25T08:15:59,548 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-25T08:15:59,549 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-25T08:15:59,550 warning: no previously-included files found matching 'Dockerfile' 2023-02-25T08:15:59,550 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-25T08:15:59,552 adding license file 'LICENSE' 2023-02-25T08:15:59,565 writing manifest file '/tmp/pip-modern-metadata-7k13cspy/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:15:59,567 creating '/tmp/pip-modern-metadata-7k13cspy/pyobo-0.8.11.dist-info' 2023-02-25T08:15:59,832 Preparing metadata (pyproject.toml): finished with status 'done' 2023-02-25T08:15:59,841 Source in /tmp/pip-wheel-rj93e0xv/pyobo_21c08ce8e75e41cd9f5d38606ec58427 has version 0.8.11, which satisfies requirement pyobo==0.8.11 from https://files.pythonhosted.org/packages/8a/78/051d75855d052c71d01e9d7fdf1f9e86e2da254ffda9c399edc1d3540f9f/pyobo-0.8.11.tar.gz 2023-02-25T08:15:59,842 Removed pyobo==0.8.11 from https://files.pythonhosted.org/packages/8a/78/051d75855d052c71d01e9d7fdf1f9e86e2da254ffda9c399edc1d3540f9f/pyobo-0.8.11.tar.gz from build tracker '/tmp/pip-build-tracker-ck7y7jeu' 2023-02-25T08:15:59,850 Created temporary directory: /tmp/pip-unpack-dznk61xo 2023-02-25T08:15:59,851 Building wheels for collected packages: pyobo 2023-02-25T08:15:59,856 Created temporary directory: /tmp/pip-wheel-03z_qznb 2023-02-25T08:15:59,856 Destination directory: /tmp/pip-wheel-03z_qznb 2023-02-25T08:15:59,858 Building wheel for pyobo (pyproject.toml): started 2023-02-25T08:15:59,859 Running command Building wheel for pyobo (pyproject.toml) 2023-02-25T08:16:00,449 /tmp/pip-build-env-ca7p8y5i/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2023-02-25T08:16:00,449 warnings.warn(msg, warning_class) 2023-02-25T08:16:00,593 running bdist_wheel 2023-02-25T08:16:00,627 running build 2023-02-25T08:16:00,627 running build_py 2023-02-25T08:16:00,635 creating build 2023-02-25T08:16:00,636 creating build/lib 2023-02-25T08:16:00,636 creating build/lib/pyobo 2023-02-25T08:16:00,638 copying src/pyobo/mocks.py -> build/lib/pyobo 2023-02-25T08:16:00,640 copying src/pyobo/normalizer.py -> build/lib/pyobo 2023-02-25T08:16:00,642 copying src/pyobo/resource_utils.py -> build/lib/pyobo 2023-02-25T08:16:00,644 copying src/pyobo/version.py -> build/lib/pyobo 2023-02-25T08:16:00,646 copying src/pyobo/reader.py -> build/lib/pyobo 2023-02-25T08:16:00,649 copying src/pyobo/gilda_utils.py -> build/lib/pyobo 2023-02-25T08:16:00,651 copying src/pyobo/identifier_utils.py -> build/lib/pyobo 2023-02-25T08:16:00,653 copying src/pyobo/getters.py -> build/lib/pyobo 2023-02-25T08:16:00,656 copying src/pyobo/aws.py -> build/lib/pyobo 2023-02-25T08:16:00,658 copying src/pyobo/__init__.py -> build/lib/pyobo 2023-02-25T08:16:00,660 copying src/pyobo/plugins.py -> build/lib/pyobo 2023-02-25T08:16:00,662 copying src/pyobo/__main__.py -> build/lib/pyobo 2023-02-25T08:16:00,663 copying src/pyobo/constants.py -> build/lib/pyobo 2023-02-25T08:16:00,666 creating build/lib/pyobo/xrefdb 2023-02-25T08:16:00,667 copying src/pyobo/xrefdb/bengo.py -> build/lib/pyobo/xrefdb 2023-02-25T08:16:00,669 copying src/pyobo/xrefdb/xrefs_pipeline.py -> build/lib/pyobo/xrefdb 2023-02-25T08:16:00,671 copying src/pyobo/xrefdb/canonicalizer.py -> build/lib/pyobo/xrefdb 2023-02-25T08:16:00,673 copying src/pyobo/xrefdb/__init__.py -> build/lib/pyobo/xrefdb 2023-02-25T08:16:00,675 copying src/pyobo/xrefdb/priority.py -> build/lib/pyobo/xrefdb 2023-02-25T08:16:00,677 creating build/lib/pyobo/resources 2023-02-25T08:16:00,678 copying src/pyobo/resources/ro.py -> build/lib/pyobo/resources 2023-02-25T08:16:00,680 copying src/pyobo/resources/ncbitaxon.py -> build/lib/pyobo/resources 2023-02-25T08:16:00,682 copying src/pyobo/resources/__init__.py -> build/lib/pyobo/resources 2023-02-25T08:16:00,684 creating build/lib/pyobo/api 2023-02-25T08:16:00,685 copying src/pyobo/api/names.py -> build/lib/pyobo/api 2023-02-25T08:16:00,688 copying src/pyobo/api/utils.py -> build/lib/pyobo/api 2023-02-25T08:16:00,689 copying src/pyobo/api/species.py -> build/lib/pyobo/api 2023-02-25T08:16:00,691 copying src/pyobo/api/typedefs.py -> build/lib/pyobo/api 2023-02-25T08:16:00,693 copying src/pyobo/api/hierarchy.py -> build/lib/pyobo/api 2023-02-25T08:16:00,696 copying src/pyobo/api/relations.py -> build/lib/pyobo/api 2023-02-25T08:16:00,698 copying src/pyobo/api/__init__.py -> build/lib/pyobo/api 2023-02-25T08:16:00,700 copying src/pyobo/api/xrefs.py -> build/lib/pyobo/api 2023-02-25T08:16:00,701 copying src/pyobo/api/properties.py -> build/lib/pyobo/api 2023-02-25T08:16:00,704 copying src/pyobo/api/metadata.py -> build/lib/pyobo/api 2023-02-25T08:16:00,706 copying src/pyobo/api/alts.py -> build/lib/pyobo/api 2023-02-25T08:16:00,708 creating build/lib/pyobo/struct 2023-02-25T08:16:00,709 copying src/pyobo/struct/struct.py -> build/lib/pyobo/struct 2023-02-25T08:16:00,713 copying src/pyobo/struct/utils.py -> build/lib/pyobo/struct 2023-02-25T08:16:00,715 copying src/pyobo/struct/reference.py -> build/lib/pyobo/struct 2023-02-25T08:16:00,717 copying src/pyobo/struct/__init__.py -> build/lib/pyobo/struct 2023-02-25T08:16:00,719 copying src/pyobo/struct/typedef.py -> build/lib/pyobo/struct 2023-02-25T08:16:00,722 creating build/lib/pyobo/cli 2023-02-25T08:16:00,723 copying src/pyobo/cli/utils.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,725 copying src/pyobo/cli/database.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,727 copying src/pyobo/cli/lookup.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,729 copying src/pyobo/cli/aws.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,731 copying src/pyobo/cli/__init__.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,733 copying src/pyobo/cli/cli.py -> build/lib/pyobo/cli 2023-02-25T08:16:00,735 creating build/lib/pyobo/apps 2023-02-25T08:16:00,736 copying src/pyobo/apps/__init__.py -> build/lib/pyobo/apps 2023-02-25T08:16:00,738 copying src/pyobo/apps/cli.py -> build/lib/pyobo/apps 2023-02-25T08:16:00,740 creating build/lib/pyobo/utils 2023-02-25T08:16:00,741 copying src/pyobo/utils/iter.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,743 copying src/pyobo/utils/misc.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,745 copying src/pyobo/utils/cache.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,747 copying src/pyobo/utils/__init__.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,749 copying src/pyobo/utils/path.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,751 copying src/pyobo/utils/ndex_utils.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,752 copying src/pyobo/utils/io.py -> build/lib/pyobo/utils 2023-02-25T08:16:00,757 creating build/lib/pyobo/sources 2023-02-25T08:16:00,758 copying src/pyobo/sources/flybase.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,760 copying src/pyobo/sources/agrovoc.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,762 copying src/pyobo/sources/biogrid.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,764 copying src/pyobo/sources/pubchem.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,766 copying src/pyobo/sources/famplex.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,768 copying src/pyobo/sources/mirbase_mature.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,770 copying src/pyobo/sources/cgnc.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,772 copying src/pyobo/sources/depmap.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,773 copying src/pyobo/sources/rgd.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,776 copying src/pyobo/sources/wikipathways.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,778 copying src/pyobo/sources/msigdb.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,780 copying src/pyobo/sources/antibodyregistry.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,782 copying src/pyobo/sources/gwascentral_phenotype.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,784 copying src/pyobo/sources/utils.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,786 copying src/pyobo/sources/hgnc.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,788 copying src/pyobo/sources/pfam_clan.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,789 copying src/pyobo/sources/zfin.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,792 copying src/pyobo/sources/interpro.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,794 copying src/pyobo/sources/pid.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,796 copying src/pyobo/sources/ncbigene.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,798 copying src/pyobo/sources/go.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,800 copying src/pyobo/sources/complexportal.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,802 copying src/pyobo/sources/mgi.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,804 copying src/pyobo/sources/sgd.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,806 copying src/pyobo/sources/pfam.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,808 copying src/pyobo/sources/drugbank_salt.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,810 copying src/pyobo/sources/icd10.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,812 copying src/pyobo/sources/gmt_utils.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,813 copying src/pyobo/sources/conso.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,816 copying src/pyobo/sources/slm.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,817 copying src/pyobo/sources/mirbase_family.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,819 copying src/pyobo/sources/__init__.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,821 copying src/pyobo/sources/itis.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,823 copying src/pyobo/sources/pathbank.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,825 copying src/pyobo/sources/npass.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,827 copying src/pyobo/sources/mirbase.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,829 copying src/pyobo/sources/chebi.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,831 copying src/pyobo/sources/expasy.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,833 copying src/pyobo/sources/chembl.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,835 copying src/pyobo/sources/icd_utils.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,837 copying src/pyobo/sources/reactome.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,839 copying src/pyobo/sources/pombase.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,841 copying src/pyobo/sources/hgncgenefamily.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,843 copying src/pyobo/sources/mesh.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,845 copying src/pyobo/sources/dictybase_gene.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,847 copying src/pyobo/sources/gwascentral_study.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,849 copying src/pyobo/sources/drugbank.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,851 copying src/pyobo/sources/drugcentral.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,853 copying src/pyobo/sources/mirbase_constants.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,855 copying src/pyobo/sources/rhea.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,857 copying src/pyobo/sources/icd11.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,859 copying src/pyobo/sources/ccle.py -> build/lib/pyobo/sources 2023-02-25T08:16:00,862 creating build/lib/pyobo/registries 2023-02-25T08:16:00,863 copying src/pyobo/registries/metaregistry.py -> build/lib/pyobo/registries 2023-02-25T08:16:00,866 copying src/pyobo/registries/__init__.py -> build/lib/pyobo/registries 2023-02-25T08:16:00,868 creating build/lib/pyobo/ssg 2023-02-25T08:16:00,869 copying src/pyobo/ssg/__init__.py -> build/lib/pyobo/ssg 2023-02-25T08:16:00,873 creating build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,873 copying src/pyobo/xrefdb/sources/pubchem.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,876 copying src/pyobo/xrefdb/sources/famplex.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,877 copying src/pyobo/xrefdb/sources/gilda.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,879 copying src/pyobo/xrefdb/sources/cbms2019.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,881 copying src/pyobo/xrefdb/sources/ncit.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,883 copying src/pyobo/xrefdb/sources/wikidata.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,885 copying src/pyobo/xrefdb/sources/intact.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,887 copying src/pyobo/xrefdb/sources/__init__.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,889 copying src/pyobo/xrefdb/sources/biomappings.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,891 copying src/pyobo/xrefdb/sources/chembl.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,893 copying src/pyobo/xrefdb/sources/compath.py -> build/lib/pyobo/xrefdb/sources 2023-02-25T08:16:00,896 creating build/lib/pyobo/apps/mapper 2023-02-25T08:16:00,897 copying src/pyobo/apps/mapper/mapper.py -> build/lib/pyobo/apps/mapper 2023-02-25T08:16:00,899 copying src/pyobo/apps/mapper/__init__.py -> build/lib/pyobo/apps/mapper 2023-02-25T08:16:00,901 copying src/pyobo/apps/mapper/__main__.py -> build/lib/pyobo/apps/mapper 2023-02-25T08:16:00,903 copying src/pyobo/apps/mapper/cli.py -> build/lib/pyobo/apps/mapper 2023-02-25T08:16:00,905 creating build/lib/pyobo/apps/gilda 2023-02-25T08:16:00,906 copying src/pyobo/apps/gilda/app.py -> build/lib/pyobo/apps/gilda 2023-02-25T08:16:00,908 copying src/pyobo/apps/gilda/__init__.py -> build/lib/pyobo/apps/gilda 2023-02-25T08:16:00,910 copying src/pyobo/apps/gilda/__main__.py -> build/lib/pyobo/apps/gilda 2023-02-25T08:16:00,912 copying src/pyobo/apps/gilda/cli.py -> build/lib/pyobo/apps/gilda 2023-02-25T08:16:00,914 creating build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,915 copying src/pyobo/sources/selventa/schem.py -> build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,918 copying src/pyobo/sources/selventa/sdis.py -> build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,919 copying src/pyobo/sources/selventa/__init__.py -> build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,921 copying src/pyobo/sources/selventa/scomp.py -> build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,923 copying src/pyobo/sources/selventa/sfam.py -> build/lib/pyobo/sources/selventa 2023-02-25T08:16:00,926 creating build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,927 copying src/pyobo/sources/kegg/api.py -> build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,929 copying src/pyobo/sources/kegg/__init__.py -> build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,931 copying src/pyobo/sources/kegg/genes.py -> build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,933 copying src/pyobo/sources/kegg/genome.py -> build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,935 copying src/pyobo/sources/kegg/pathway.py -> build/lib/pyobo/sources/kegg 2023-02-25T08:16:00,938 creating build/lib/pyobo/sources/uniprot 2023-02-25T08:16:00,939 copying src/pyobo/sources/uniprot/uniprot_ptm.py -> build/lib/pyobo/sources/uniprot 2023-02-25T08:16:00,942 copying src/pyobo/sources/uniprot/uniprot.py -> build/lib/pyobo/sources/uniprot 2023-02-25T08:16:00,944 copying src/pyobo/sources/uniprot/__init__.py -> build/lib/pyobo/sources/uniprot 2023-02-25T08:16:00,946 creating build/lib/pyobo/sources/umls 2023-02-25T08:16:00,947 copying src/pyobo/sources/umls/umls.py -> build/lib/pyobo/sources/umls 2023-02-25T08:16:00,949 copying src/pyobo/sources/umls/__init__.py -> build/lib/pyobo/sources/umls 2023-02-25T08:16:00,951 copying src/pyobo/sources/umls/__main__.py -> build/lib/pyobo/sources/umls 2023-02-25T08:16:00,953 running egg_info 2023-02-25T08:16:00,976 writing src/pyobo.egg-info/PKG-INFO 2023-02-25T08:16:00,978 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-02-25T08:16:00,980 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-02-25T08:16:00,982 writing requirements to src/pyobo.egg-info/requires.txt 2023-02-25T08:16:00,983 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-02-25T08:16:01,006 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:16:01,014 reading manifest template 'MANIFEST.in' 2023-02-25T08:16:01,030 no previously-included directories found matching 'benchmarking' 2023-02-25T08:16:01,031 no previously-included directories found matching 'tests/.pytest_cache' 2023-02-25T08:16:01,113 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-02-25T08:16:01,115 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-02-25T08:16:01,116 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-02-25T08:16:01,118 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-02-25T08:16:01,119 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-02-25T08:16:01,121 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-02-25T08:16:01,122 warning: no previously-included files found matching '.bumpversion.cfg' 2023-02-25T08:16:01,122 warning: no previously-included files found matching 'Dockerfile' 2023-02-25T08:16:01,123 warning: no previously-included files found matching 'docker-compose.yml' 2023-02-25T08:16:01,125 adding license file 'LICENSE' 2023-02-25T08:16:01,140 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-02-25T08:16:01,147 /tmp/pip-build-env-ca7p8y5i/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyobo.apps.gilda.templates' as data is deprecated, please list it in `packages`. 2023-02-25T08:16:01,147 !! 2023-02-25T08:16:01,147 ############################ 2023-02-25T08:16:01,147 # Package would be ignored # 2023-02-25T08:16:01,147 ############################ 2023-02-25T08:16:01,147 Python recognizes 'pyobo.apps.gilda.templates' as an importable package, 2023-02-25T08:16:01,148 but it is not listed in the `packages` configuration of setuptools. 2023-02-25T08:16:01,148 'pyobo.apps.gilda.templates' has been automatically added to the distribution only 2023-02-25T08:16:01,148 because it may contain data files, but this behavior is likely to change 2023-02-25T08:16:01,148 in future versions of setuptools (and therefore is considered deprecated). 2023-02-25T08:16:01,148 Please make sure that 'pyobo.apps.gilda.templates' is included as a package by using 2023-02-25T08:16:01,148 the `packages` configuration field or the proper discovery methods 2023-02-25T08:16:01,148 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-25T08:16:01,149 instead of `find_packages(...)`/`find:`). 2023-02-25T08:16:01,149 You can read more about "package discovery" and "data files" on setuptools 2023-02-25T08:16:01,149 documentation page. 2023-02-25T08:16:01,149 !! 2023-02-25T08:16:01,150 check.warn(importable) 2023-02-25T08:16:01,150 /tmp/pip-build-env-ca7p8y5i/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyobo.apps.mapper.templates' as data is deprecated, please list it in `packages`. 2023-02-25T08:16:01,150 !! 2023-02-25T08:16:01,150 ############################ 2023-02-25T08:16:01,150 # Package would be ignored # 2023-02-25T08:16:01,150 ############################ 2023-02-25T08:16:01,150 Python recognizes 'pyobo.apps.mapper.templates' as an importable package, 2023-02-25T08:16:01,151 but it is not listed in the `packages` configuration of setuptools. 2023-02-25T08:16:01,151 'pyobo.apps.mapper.templates' has been automatically added to the distribution only 2023-02-25T08:16:01,151 because it may contain data files, but this behavior is likely to change 2023-02-25T08:16:01,151 in future versions of setuptools (and therefore is considered deprecated). 2023-02-25T08:16:01,151 Please make sure that 'pyobo.apps.mapper.templates' is included as a package by using 2023-02-25T08:16:01,151 the `packages` configuration field or the proper discovery methods 2023-02-25T08:16:01,151 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-02-25T08:16:01,152 instead of `find_packages(...)`/`find:`). 2023-02-25T08:16:01,152 You can read more about "package discovery" and "data files" on setuptools 2023-02-25T08:16:01,152 documentation page. 2023-02-25T08:16:01,152 !! 2023-02-25T08:16:01,153 check.warn(importable) 2023-02-25T08:16:01,153 copying src/pyobo/resources/ncbitaxon.tsv.gz -> build/lib/pyobo/resources 2023-02-25T08:16:01,598 copying src/pyobo/resources/ro.tsv -> build/lib/pyobo/resources 2023-02-25T08:16:01,601 copying src/pyobo/registries/metaregistry.json -> build/lib/pyobo/registries 2023-02-25T08:16:01,605 copying src/pyobo/ssg/base.html -> build/lib/pyobo/ssg 2023-02-25T08:16:01,607 copying src/pyobo/ssg/index.html -> build/lib/pyobo/ssg 2023-02-25T08:16:01,610 copying src/pyobo/ssg/term.html -> build/lib/pyobo/ssg 2023-02-25T08:16:01,612 copying src/pyobo/ssg/typedef.html -> build/lib/pyobo/ssg 2023-02-25T08:16:01,614 creating build/lib/pyobo/apps/mapper/templates 2023-02-25T08:16:01,617 copying src/pyobo/apps/mapper/templates/base.html -> build/lib/pyobo/apps/mapper/templates 2023-02-25T08:16:01,619 copying src/pyobo/apps/mapper/templates/mapper_home.html -> build/lib/pyobo/apps/mapper/templates 2023-02-25T08:16:01,622 creating build/lib/pyobo/apps/gilda/templates 2023-02-25T08:16:01,623 copying src/pyobo/apps/gilda/templates/base.html -> build/lib/pyobo/apps/gilda/templates 2023-02-25T08:16:01,626 copying src/pyobo/apps/gilda/templates/home.html -> build/lib/pyobo/apps/gilda/templates 2023-02-25T08:16:01,628 copying src/pyobo/apps/gilda/templates/matches.html -> build/lib/pyobo/apps/gilda/templates 2023-02-25T08:16:01,631 copying src/pyobo/sources/umls/synonym_types.tsv -> build/lib/pyobo/sources/umls 2023-02-25T08:16:01,662 installing to build/bdist.linux-armv7l/wheel 2023-02-25T08:16:01,663 running install 2023-02-25T08:16:01,689 running install_lib 2023-02-25T08:16:01,696 creating build/bdist.linux-armv7l 2023-02-25T08:16:01,698 creating build/bdist.linux-armv7l/wheel 2023-02-25T08:16:01,700 creating build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:01,702 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,703 copying build/lib/pyobo/xrefdb/bengo.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,705 copying build/lib/pyobo/xrefdb/xrefs_pipeline.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,708 copying build/lib/pyobo/xrefdb/canonicalizer.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,711 copying build/lib/pyobo/xrefdb/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,760 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,761 copying build/lib/pyobo/xrefdb/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,764 copying build/lib/pyobo/xrefdb/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,766 copying build/lib/pyobo/xrefdb/sources/gilda.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,768 copying build/lib/pyobo/xrefdb/sources/cbms2019.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,770 copying build/lib/pyobo/xrefdb/sources/ncit.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,773 copying build/lib/pyobo/xrefdb/sources/wikidata.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,775 copying build/lib/pyobo/xrefdb/sources/intact.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,777 copying build/lib/pyobo/xrefdb/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,779 copying build/lib/pyobo/xrefdb/sources/biomappings.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,781 copying build/lib/pyobo/xrefdb/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,783 copying build/lib/pyobo/xrefdb/sources/compath.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-02-25T08:16:01,786 copying build/lib/pyobo/xrefdb/priority.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-02-25T08:16:01,788 copying build/lib/pyobo/mocks.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:01,790 copying build/lib/pyobo/normalizer.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:01,793 copying build/lib/pyobo/resource_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:01,796 creating build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:01,797 copying build/lib/pyobo/resources/ro.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:01,799 copying build/lib/pyobo/resources/ncbitaxon.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:01,802 copying build/lib/pyobo/resources/ncbitaxon.tsv.gz -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:02,196 copying build/lib/pyobo/resources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:02,198 copying build/lib/pyobo/resources/ro.tsv -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-02-25T08:16:02,201 copying build/lib/pyobo/version.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,204 creating build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,205 copying build/lib/pyobo/api/names.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,207 copying build/lib/pyobo/api/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,209 copying build/lib/pyobo/api/species.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,211 copying build/lib/pyobo/api/typedefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,213 copying build/lib/pyobo/api/hierarchy.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,216 copying build/lib/pyobo/api/relations.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,218 copying build/lib/pyobo/api/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,220 copying build/lib/pyobo/api/xrefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,222 copying build/lib/pyobo/api/properties.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,224 copying build/lib/pyobo/api/metadata.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,226 copying build/lib/pyobo/api/alts.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-02-25T08:16:02,228 copying build/lib/pyobo/reader.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,231 creating build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,232 copying build/lib/pyobo/struct/struct.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,236 copying build/lib/pyobo/struct/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,238 copying build/lib/pyobo/struct/reference.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,240 copying build/lib/pyobo/struct/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,242 copying build/lib/pyobo/struct/typedef.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-02-25T08:16:02,245 copying build/lib/pyobo/gilda_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,247 copying build/lib/pyobo/identifier_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,249 creating build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,251 copying build/lib/pyobo/cli/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,253 copying build/lib/pyobo/cli/database.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,256 copying build/lib/pyobo/cli/lookup.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,259 copying build/lib/pyobo/cli/aws.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,261 copying build/lib/pyobo/cli/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,263 copying build/lib/pyobo/cli/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-02-25T08:16:02,266 copying build/lib/pyobo/getters.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,269 copying build/lib/pyobo/aws.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,271 creating build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-25T08:16:02,273 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-25T08:16:02,274 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-25T08:16:02,276 copying build/lib/pyobo/apps/mapper/templates/mapper_home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-25T08:16:02,278 copying build/lib/pyobo/apps/mapper/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-02-25T08:16:02,280 copying build/lib/pyobo/apps/mapper/mapper.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-25T08:16:02,282 copying build/lib/pyobo/apps/mapper/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-25T08:16:02,284 copying build/lib/pyobo/apps/mapper/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-25T08:16:02,286 copying build/lib/pyobo/apps/mapper/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-02-25T08:16:02,288 copying build/lib/pyobo/apps/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-25T08:16:02,290 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-25T08:16:02,291 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-25T08:16:02,292 copying build/lib/pyobo/apps/gilda/templates/home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-25T08:16:02,294 copying build/lib/pyobo/apps/gilda/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-25T08:16:02,296 copying build/lib/pyobo/apps/gilda/templates/matches.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-02-25T08:16:02,298 copying build/lib/pyobo/apps/gilda/app.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-25T08:16:02,300 copying build/lib/pyobo/apps/gilda/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-25T08:16:02,302 copying build/lib/pyobo/apps/gilda/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-25T08:16:02,304 copying build/lib/pyobo/apps/gilda/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-02-25T08:16:02,306 copying build/lib/pyobo/apps/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-02-25T08:16:02,308 copying build/lib/pyobo/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,310 copying build/lib/pyobo/plugins.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,312 creating build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,313 copying build/lib/pyobo/utils/iter.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,315 copying build/lib/pyobo/utils/misc.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,318 copying build/lib/pyobo/utils/cache.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,319 copying build/lib/pyobo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,322 copying build/lib/pyobo/utils/path.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,323 copying build/lib/pyobo/utils/ndex_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,325 copying build/lib/pyobo/utils/io.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-02-25T08:16:02,328 copying build/lib/pyobo/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,331 creating build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,332 copying build/lib/pyobo/sources/flybase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,334 copying build/lib/pyobo/sources/agrovoc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,337 copying build/lib/pyobo/sources/biogrid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,339 copying build/lib/pyobo/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,341 copying build/lib/pyobo/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,343 copying build/lib/pyobo/sources/mirbase_mature.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,345 copying build/lib/pyobo/sources/cgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,347 copying build/lib/pyobo/sources/depmap.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,349 copying build/lib/pyobo/sources/rgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,352 copying build/lib/pyobo/sources/wikipathways.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,354 copying build/lib/pyobo/sources/msigdb.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,356 copying build/lib/pyobo/sources/antibodyregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,358 copying build/lib/pyobo/sources/gwascentral_phenotype.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,360 copying build/lib/pyobo/sources/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,362 copying build/lib/pyobo/sources/hgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,365 copying build/lib/pyobo/sources/pfam_clan.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,367 copying build/lib/pyobo/sources/zfin.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,369 copying build/lib/pyobo/sources/interpro.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,372 copying build/lib/pyobo/sources/pid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,374 copying build/lib/pyobo/sources/ncbigene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,377 copying build/lib/pyobo/sources/go.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,379 copying build/lib/pyobo/sources/complexportal.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,381 copying build/lib/pyobo/sources/mgi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,383 copying build/lib/pyobo/sources/sgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,386 creating build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,387 copying build/lib/pyobo/sources/selventa/schem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,389 copying build/lib/pyobo/sources/selventa/sdis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,391 copying build/lib/pyobo/sources/selventa/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,393 copying build/lib/pyobo/sources/selventa/scomp.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,395 copying build/lib/pyobo/sources/selventa/sfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-02-25T08:16:02,397 copying build/lib/pyobo/sources/pfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,400 creating build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,401 copying build/lib/pyobo/sources/kegg/api.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,403 copying build/lib/pyobo/sources/kegg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,405 copying build/lib/pyobo/sources/kegg/genes.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,407 copying build/lib/pyobo/sources/kegg/genome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,409 copying build/lib/pyobo/sources/kegg/pathway.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-02-25T08:16:02,412 creating build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-25T08:16:02,413 copying build/lib/pyobo/sources/uniprot/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-25T08:16:02,415 copying build/lib/pyobo/sources/uniprot/uniprot.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-25T08:16:02,417 copying build/lib/pyobo/sources/uniprot/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-02-25T08:16:02,419 copying build/lib/pyobo/sources/drugbank_salt.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,421 copying build/lib/pyobo/sources/icd10.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,423 copying build/lib/pyobo/sources/gmt_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,425 copying build/lib/pyobo/sources/conso.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,427 copying build/lib/pyobo/sources/slm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,429 copying build/lib/pyobo/sources/mirbase_family.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,431 copying build/lib/pyobo/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,433 copying build/lib/pyobo/sources/itis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,435 copying build/lib/pyobo/sources/pathbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,437 copying build/lib/pyobo/sources/npass.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,439 copying build/lib/pyobo/sources/mirbase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,442 copying build/lib/pyobo/sources/chebi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,444 copying build/lib/pyobo/sources/expasy.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,446 copying build/lib/pyobo/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,448 copying build/lib/pyobo/sources/icd_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,450 copying build/lib/pyobo/sources/reactome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,452 copying build/lib/pyobo/sources/pombase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,454 copying build/lib/pyobo/sources/hgncgenefamily.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,456 copying build/lib/pyobo/sources/mesh.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,459 copying build/lib/pyobo/sources/dictybase_gene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,461 copying build/lib/pyobo/sources/gwascentral_study.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,463 copying build/lib/pyobo/sources/drugbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,466 creating build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-25T08:16:02,467 copying build/lib/pyobo/sources/umls/umls.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-25T08:16:02,469 copying build/lib/pyobo/sources/umls/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-25T08:16:02,471 copying build/lib/pyobo/sources/umls/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-25T08:16:02,473 copying build/lib/pyobo/sources/umls/synonym_types.tsv -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-02-25T08:16:02,475 copying build/lib/pyobo/sources/drugcentral.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,477 copying build/lib/pyobo/sources/mirbase_constants.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,479 copying build/lib/pyobo/sources/rhea.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,481 copying build/lib/pyobo/sources/icd11.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,484 copying build/lib/pyobo/sources/ccle.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-02-25T08:16:02,487 creating build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-25T08:16:02,488 copying build/lib/pyobo/registries/metaregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-25T08:16:02,491 copying build/lib/pyobo/registries/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-25T08:16:02,493 copying build/lib/pyobo/registries/metaregistry.json -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-02-25T08:16:02,495 copying build/lib/pyobo/constants.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-02-25T08:16:02,498 creating build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,499 copying build/lib/pyobo/ssg/term.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,501 copying build/lib/pyobo/ssg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,503 copying build/lib/pyobo/ssg/base.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,505 copying build/lib/pyobo/ssg/index.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,507 copying build/lib/pyobo/ssg/typedef.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-02-25T08:16:02,509 running install_egg_info 2023-02-25T08:16:02,521 Copying src/pyobo.egg-info to build/bdist.linux-armv7l/wheel/pyobo-0.8.11-py3.9.egg-info 2023-02-25T08:16:02,536 running install_scripts 2023-02-25T08:16:02,566 creating build/bdist.linux-armv7l/wheel/pyobo-0.8.11.dist-info/WHEEL 2023-02-25T08:16:02,569 creating '/tmp/pip-wheel-03z_qznb/.tmp-87lxqotk/pyobo-0.8.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-25T08:16:02,571 adding 'pyobo/__init__.py' 2023-02-25T08:16:02,573 adding 'pyobo/__main__.py' 2023-02-25T08:16:02,574 adding 'pyobo/aws.py' 2023-02-25T08:16:02,576 adding 'pyobo/constants.py' 2023-02-25T08:16:02,579 adding 'pyobo/getters.py' 2023-02-25T08:16:02,581 adding 'pyobo/gilda_utils.py' 2023-02-25T08:16:02,582 adding 'pyobo/identifier_utils.py' 2023-02-25T08:16:02,583 adding 'pyobo/mocks.py' 2023-02-25T08:16:02,585 adding 'pyobo/normalizer.py' 2023-02-25T08:16:02,587 adding 'pyobo/plugins.py' 2023-02-25T08:16:02,589 adding 'pyobo/reader.py' 2023-02-25T08:16:02,591 adding 'pyobo/resource_utils.py' 2023-02-25T08:16:02,592 adding 'pyobo/version.py' 2023-02-25T08:16:02,594 adding 'pyobo/api/__init__.py' 2023-02-25T08:16:02,596 adding 'pyobo/api/alts.py' 2023-02-25T08:16:02,597 adding 'pyobo/api/hierarchy.py' 2023-02-25T08:16:02,599 adding 'pyobo/api/metadata.py' 2023-02-25T08:16:02,600 adding 'pyobo/api/names.py' 2023-02-25T08:16:02,602 adding 'pyobo/api/properties.py' 2023-02-25T08:16:02,603 adding 'pyobo/api/relations.py' 2023-02-25T08:16:02,605 adding 'pyobo/api/species.py' 2023-02-25T08:16:02,606 adding 'pyobo/api/typedefs.py' 2023-02-25T08:16:02,607 adding 'pyobo/api/utils.py' 2023-02-25T08:16:02,609 adding 'pyobo/api/xrefs.py' 2023-02-25T08:16:02,610 adding 'pyobo/apps/__init__.py' 2023-02-25T08:16:02,612 adding 'pyobo/apps/cli.py' 2023-02-25T08:16:02,613 adding 'pyobo/apps/gilda/__init__.py' 2023-02-25T08:16:02,615 adding 'pyobo/apps/gilda/__main__.py' 2023-02-25T08:16:02,616 adding 'pyobo/apps/gilda/app.py' 2023-02-25T08:16:02,617 adding 'pyobo/apps/gilda/cli.py' 2023-02-25T08:16:02,619 adding 'pyobo/apps/gilda/templates/base.html' 2023-02-25T08:16:02,620 adding 'pyobo/apps/gilda/templates/home.html' 2023-02-25T08:16:02,622 adding 'pyobo/apps/gilda/templates/matches.html' 2023-02-25T08:16:02,623 adding 'pyobo/apps/mapper/__init__.py' 2023-02-25T08:16:02,625 adding 'pyobo/apps/mapper/__main__.py' 2023-02-25T08:16:02,626 adding 'pyobo/apps/mapper/cli.py' 2023-02-25T08:16:02,627 adding 'pyobo/apps/mapper/mapper.py' 2023-02-25T08:16:02,629 adding 'pyobo/apps/mapper/templates/base.html' 2023-02-25T08:16:02,631 adding 'pyobo/apps/mapper/templates/mapper_home.html' 2023-02-25T08:16:02,632 adding 'pyobo/cli/__init__.py' 2023-02-25T08:16:02,634 adding 'pyobo/cli/aws.py' 2023-02-25T08:16:02,635 adding 'pyobo/cli/cli.py' 2023-02-25T08:16:02,637 adding 'pyobo/cli/database.py' 2023-02-25T08:16:02,639 adding 'pyobo/cli/lookup.py' 2023-02-25T08:16:02,640 adding 'pyobo/cli/utils.py' 2023-02-25T08:16:02,642 adding 'pyobo/registries/__init__.py' 2023-02-25T08:16:02,644 adding 'pyobo/registries/metaregistry.json' 2023-02-25T08:16:02,646 adding 'pyobo/registries/metaregistry.py' 2023-02-25T08:16:02,648 adding 'pyobo/resources/__init__.py' 2023-02-25T08:16:02,649 adding 'pyobo/resources/ncbitaxon.py' 2023-02-25T08:16:05,326 adding 'pyobo/resources/ncbitaxon.tsv.gz' 2023-02-25T08:16:05,469 adding 'pyobo/resources/ro.py' 2023-02-25T08:16:05,472 adding 'pyobo/resources/ro.tsv' 2023-02-25T08:16:05,476 adding 'pyobo/sources/__init__.py' 2023-02-25T08:16:05,477 adding 'pyobo/sources/agrovoc.py' 2023-02-25T08:16:05,478 adding 'pyobo/sources/antibodyregistry.py' 2023-02-25T08:16:05,480 adding 'pyobo/sources/biogrid.py' 2023-02-25T08:16:05,481 adding 'pyobo/sources/ccle.py' 2023-02-25T08:16:05,483 adding 'pyobo/sources/cgnc.py' 2023-02-25T08:16:05,484 adding 'pyobo/sources/chebi.py' 2023-02-25T08:16:05,485 adding 'pyobo/sources/chembl.py' 2023-02-25T08:16:05,487 adding 'pyobo/sources/complexportal.py' 2023-02-25T08:16:05,488 adding 'pyobo/sources/conso.py' 2023-02-25T08:16:05,490 adding 'pyobo/sources/depmap.py' 2023-02-25T08:16:05,491 adding 'pyobo/sources/dictybase_gene.py' 2023-02-25T08:16:05,493 adding 'pyobo/sources/drugbank.py' 2023-02-25T08:16:05,494 adding 'pyobo/sources/drugbank_salt.py' 2023-02-25T08:16:05,496 adding 'pyobo/sources/drugcentral.py' 2023-02-25T08:16:05,498 adding 'pyobo/sources/expasy.py' 2023-02-25T08:16:05,499 adding 'pyobo/sources/famplex.py' 2023-02-25T08:16:05,501 adding 'pyobo/sources/flybase.py' 2023-02-25T08:16:05,502 adding 'pyobo/sources/gmt_utils.py' 2023-02-25T08:16:05,504 adding 'pyobo/sources/go.py' 2023-02-25T08:16:05,505 adding 'pyobo/sources/gwascentral_phenotype.py' 2023-02-25T08:16:05,506 adding 'pyobo/sources/gwascentral_study.py' 2023-02-25T08:16:05,508 adding 'pyobo/sources/hgnc.py' 2023-02-25T08:16:05,510 adding 'pyobo/sources/hgncgenefamily.py' 2023-02-25T08:16:05,511 adding 'pyobo/sources/icd10.py' 2023-02-25T08:16:05,513 adding 'pyobo/sources/icd11.py' 2023-02-25T08:16:05,514 adding 'pyobo/sources/icd_utils.py' 2023-02-25T08:16:05,516 adding 'pyobo/sources/interpro.py' 2023-02-25T08:16:05,517 adding 'pyobo/sources/itis.py' 2023-02-25T08:16:05,519 adding 'pyobo/sources/mesh.py' 2023-02-25T08:16:05,521 adding 'pyobo/sources/mgi.py' 2023-02-25T08:16:05,522 adding 'pyobo/sources/mirbase.py' 2023-02-25T08:16:05,524 adding 'pyobo/sources/mirbase_constants.py' 2023-02-25T08:16:05,525 adding 'pyobo/sources/mirbase_family.py' 2023-02-25T08:16:05,526 adding 'pyobo/sources/mirbase_mature.py' 2023-02-25T08:16:05,528 adding 'pyobo/sources/msigdb.py' 2023-02-25T08:16:05,529 adding 'pyobo/sources/ncbigene.py' 2023-02-25T08:16:05,531 adding 'pyobo/sources/npass.py' 2023-02-25T08:16:05,533 adding 'pyobo/sources/pathbank.py' 2023-02-25T08:16:05,534 adding 'pyobo/sources/pfam.py' 2023-02-25T08:16:05,535 adding 'pyobo/sources/pfam_clan.py' 2023-02-25T08:16:05,537 adding 'pyobo/sources/pid.py' 2023-02-25T08:16:05,538 adding 'pyobo/sources/pombase.py' 2023-02-25T08:16:05,540 adding 'pyobo/sources/pubchem.py' 2023-02-25T08:16:05,541 adding 'pyobo/sources/reactome.py' 2023-02-25T08:16:05,543 adding 'pyobo/sources/rgd.py' 2023-02-25T08:16:05,545 adding 'pyobo/sources/rhea.py' 2023-02-25T08:16:05,546 adding 'pyobo/sources/sgd.py' 2023-02-25T08:16:05,548 adding 'pyobo/sources/slm.py' 2023-02-25T08:16:05,549 adding 'pyobo/sources/utils.py' 2023-02-25T08:16:05,551 adding 'pyobo/sources/wikipathways.py' 2023-02-25T08:16:05,552 adding 'pyobo/sources/zfin.py' 2023-02-25T08:16:05,554 adding 'pyobo/sources/kegg/__init__.py' 2023-02-25T08:16:05,556 adding 'pyobo/sources/kegg/api.py' 2023-02-25T08:16:05,557 adding 'pyobo/sources/kegg/genes.py' 2023-02-25T08:16:05,559 adding 'pyobo/sources/kegg/genome.py' 2023-02-25T08:16:05,561 adding 'pyobo/sources/kegg/pathway.py' 2023-02-25T08:16:05,563 adding 'pyobo/sources/selventa/__init__.py' 2023-02-25T08:16:05,564 adding 'pyobo/sources/selventa/schem.py' 2023-02-25T08:16:05,566 adding 'pyobo/sources/selventa/scomp.py' 2023-02-25T08:16:05,567 adding 'pyobo/sources/selventa/sdis.py' 2023-02-25T08:16:05,568 adding 'pyobo/sources/selventa/sfam.py' 2023-02-25T08:16:05,570 adding 'pyobo/sources/umls/__init__.py' 2023-02-25T08:16:05,571 adding 'pyobo/sources/umls/__main__.py' 2023-02-25T08:16:05,573 adding 'pyobo/sources/umls/synonym_types.tsv' 2023-02-25T08:16:05,575 adding 'pyobo/sources/umls/umls.py' 2023-02-25T08:16:05,577 adding 'pyobo/sources/uniprot/__init__.py' 2023-02-25T08:16:05,578 adding 'pyobo/sources/uniprot/uniprot.py' 2023-02-25T08:16:05,580 adding 'pyobo/sources/uniprot/uniprot_ptm.py' 2023-02-25T08:16:05,582 adding 'pyobo/ssg/__init__.py' 2023-02-25T08:16:05,584 adding 'pyobo/ssg/base.html' 2023-02-25T08:16:05,586 adding 'pyobo/ssg/index.html' 2023-02-25T08:16:05,587 adding 'pyobo/ssg/term.html' 2023-02-25T08:16:05,588 adding 'pyobo/ssg/typedef.html' 2023-02-25T08:16:05,590 adding 'pyobo/struct/__init__.py' 2023-02-25T08:16:05,592 adding 'pyobo/struct/reference.py' 2023-02-25T08:16:05,597 adding 'pyobo/struct/struct.py' 2023-02-25T08:16:05,600 adding 'pyobo/struct/typedef.py' 2023-02-25T08:16:05,601 adding 'pyobo/struct/utils.py' 2023-02-25T08:16:05,603 adding 'pyobo/utils/__init__.py' 2023-02-25T08:16:05,604 adding 'pyobo/utils/cache.py' 2023-02-25T08:16:05,606 adding 'pyobo/utils/io.py' 2023-02-25T08:16:05,607 adding 'pyobo/utils/iter.py' 2023-02-25T08:16:05,609 adding 'pyobo/utils/misc.py' 2023-02-25T08:16:05,610 adding 'pyobo/utils/ndex_utils.py' 2023-02-25T08:16:05,612 adding 'pyobo/utils/path.py' 2023-02-25T08:16:05,614 adding 'pyobo/xrefdb/__init__.py' 2023-02-25T08:16:05,615 adding 'pyobo/xrefdb/bengo.py' 2023-02-25T08:16:05,617 adding 'pyobo/xrefdb/canonicalizer.py' 2023-02-25T08:16:05,618 adding 'pyobo/xrefdb/priority.py' 2023-02-25T08:16:05,620 adding 'pyobo/xrefdb/xrefs_pipeline.py' 2023-02-25T08:16:05,622 adding 'pyobo/xrefdb/sources/__init__.py' 2023-02-25T08:16:05,623 adding 'pyobo/xrefdb/sources/biomappings.py' 2023-02-25T08:16:05,625 adding 'pyobo/xrefdb/sources/cbms2019.py' 2023-02-25T08:16:05,626 adding 'pyobo/xrefdb/sources/chembl.py' 2023-02-25T08:16:05,628 adding 'pyobo/xrefdb/sources/compath.py' 2023-02-25T08:16:05,629 adding 'pyobo/xrefdb/sources/famplex.py' 2023-02-25T08:16:05,631 adding 'pyobo/xrefdb/sources/gilda.py' 2023-02-25T08:16:05,632 adding 'pyobo/xrefdb/sources/intact.py' 2023-02-25T08:16:05,634 adding 'pyobo/xrefdb/sources/ncit.py' 2023-02-25T08:16:05,635 adding 'pyobo/xrefdb/sources/pubchem.py' 2023-02-25T08:16:05,636 adding 'pyobo/xrefdb/sources/wikidata.py' 2023-02-25T08:16:05,639 adding 'pyobo-0.8.11.dist-info/LICENSE' 2023-02-25T08:16:05,641 adding 'pyobo-0.8.11.dist-info/METADATA' 2023-02-25T08:16:05,643 adding 'pyobo-0.8.11.dist-info/WHEEL' 2023-02-25T08:16:05,644 adding 'pyobo-0.8.11.dist-info/entry_points.txt' 2023-02-25T08:16:05,645 adding 'pyobo-0.8.11.dist-info/top_level.txt' 2023-02-25T08:16:05,648 adding 'pyobo-0.8.11.dist-info/RECORD' 2023-02-25T08:16:05,976 removing build/bdist.linux-armv7l/wheel 2023-02-25T08:16:06,119 Building wheel for pyobo (pyproject.toml): finished with status 'done' 2023-02-25T08:16:06,577 Created wheel for pyobo: filename=pyobo-0.8.11-py3-none-any.whl size=23086280 sha256=dc1bfe127949bdb5cdf008a4093fc3034a6bfb906a1cebaadad4b2ff7ead3165 2023-02-25T08:16:06,578 Stored in directory: /tmp/pip-ephem-wheel-cache-cmnmvifp/wheels/45/d9/0c/28c570b5a7fdd12dd593908801ec510eab69ca64410c1122e2 2023-02-25T08:16:06,609 Successfully built pyobo 2023-02-25T08:16:07,224 Removed build tracker: '/tmp/pip-build-tracker-ck7y7jeu'