2023-02-27T16:31:27,469 Created temporary directory: /tmp/pip-ephem-wheel-cache-psojr_80 2023-02-27T16:31:27,475 Created temporary directory: /tmp/pip-build-tracker-xcohim42 2023-02-27T16:31:27,475 Initialized build tracking at /tmp/pip-build-tracker-xcohim42 2023-02-27T16:31:27,476 Created build tracker: /tmp/pip-build-tracker-xcohim42 2023-02-27T16:31:27,476 Entered build tracker: /tmp/pip-build-tracker-xcohim42 2023-02-27T16:31:27,477 Created temporary directory: /tmp/pip-wheel-hdse4ysm 2023-02-27T16:31:27,488 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-27T16:31:27,493 Created temporary directory: /tmp/pip-ephem-wheel-cache-zxhrqg64 2023-02-27T16:31:27,547 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-27T16:31:27,554 2 location(s) to search for versions of carrot-cdm: 2023-02-27T16:31:27,554 * https://pypi.org/simple/carrot-cdm/ 2023-02-27T16:31:27,554 * https://www.piwheels.org/simple/carrot-cdm/ 2023-02-27T16:31:27,555 Fetching project page and analyzing links: https://pypi.org/simple/carrot-cdm/ 2023-02-27T16:31:27,557 Getting page https://pypi.org/simple/carrot-cdm/ 2023-02-27T16:31:27,561 Found index url https://pypi.org/simple 2023-02-27T16:31:27,745 Fetched page https://pypi.org/simple/carrot-cdm/ as application/vnd.pypi.simple.v1+json 2023-02-27T16:31:27,757 Found link https://files.pythonhosted.org/packages/cf/02/b81bc7e4313c59e0668d3ec5f76488f039d51e1a8b923dc5ac5dc8f4d756/carrot-cdm-0.0.0.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.0.0 2023-02-27T16:31:27,758 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/4e/8d/e709b8aa4bc9df1526cbb30fe4c71d3e507df3c0b0f824bbee7675a6e06d/carrot_cdm-0.0.0-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,759 Found link https://files.pythonhosted.org/packages/0e/e3/affc81e61878436f7d2c66b958f6eb1f0e33cc19348e004be7bc52985c1e/carrot-cdm-0.6.0.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.0 2023-02-27T16:31:27,760 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/82/dd/4fb04cc3f5c1c362d7859c990e95d3f58c3ebfefa26c95b7e17f7b4b7b7e/carrot_cdm-0.6.0-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,765 Found link https://files.pythonhosted.org/packages/b8/79/c84342f579c70b417a54072015fcbae71275277a585915438f88643a6887/carrot-cdm-0.6.1.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.1 2023-02-27T16:31:27,766 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/94/cf/0b0bf50f4b6cf2819f48e1489f9be5abaac7dbc4d433e0c329f696bc9912/carrot_cdm-0.6.1-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,768 Found link https://files.pythonhosted.org/packages/d2/e6/35a83c38911f022eef82b933a1e7610cfe422dbd54b2cd8e309137129098/carrot-cdm-0.6.2.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.2 2023-02-27T16:31:27,768 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/98/52/79da4ead031613a7771f1a81475820d6882beda6b38aadaf4c6dd53e2d3e/carrot_cdm-0.6.2-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,770 Found link https://files.pythonhosted.org/packages/23/b0/db2a8fc547b33b3fc771c8d6279f2fb8b5243404e8d22102725761b475b0/carrot-cdm-0.6.3.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.3 2023-02-27T16:31:27,770 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/c3/b8/434e4d5bd0e0e2796f8d2c964b4c3a013fd9aedbdb49344103c3e343267b/carrot_cdm-0.6.3-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,772 Found link https://files.pythonhosted.org/packages/b1/83/5de1b6064fb07a93efc463fe247a858b91a8a2f1fcca364608cae7a90a66/carrot-cdm-0.6.4.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.4 2023-02-27T16:31:27,773 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/bd/8b/26a705e135ae9a0ed826a82d56c85fbe9107e0bf72b8771877bcf5f8ef73/carrot_cdm-0.6.4-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,774 Found link https://files.pythonhosted.org/packages/6d/e2/1087ac4e72fae3be3fe6cc0ea691ef9c788bc85b53626a2c0b143851af64/carrot-cdm-0.6.5.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.5 2023-02-27T16:31:27,775 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/67/e8/b742af08f4d537d916d1d7c45c6b8e98a7bd75cf1f5aae4c6d5f51101f7f/carrot_cdm-0.6.5-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,776 Found link https://files.pythonhosted.org/packages/13/8f/3d15d22e51b15907a14ed8060d6b2d0dd64f1f87943a74202c18c1fda59a/carrot-cdm-0.6.6.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.6 2023-02-27T16:31:27,776 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/96/78/15a009f5a19360a22734921aa856187b7febb29b41b3e670b5ae9f5c2e40/carrot_cdm-0.6.6-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,778 Found link https://files.pythonhosted.org/packages/cd/c5/47490003c83c6e1ad6cf0d5e27d5be52aab1fb71467a07a6ae25f11a5d57/carrot-cdm-0.6.6.1.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.6.1 2023-02-27T16:31:27,778 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/92/ab/ca06891004f07d8507253df57106450006c7bc3efa9484b6e39314d7ba74/carrot_cdm-0.6.6.1-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,780 Found link https://files.pythonhosted.org/packages/77/04/7016325d3b2128c51e9b60fe0bd8b37bd99130c5f8a515066324ce586d94/carrot-cdm-0.6.7.tar.gz (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6), version: 0.6.7 2023-02-27T16:31:27,780 Skipping link: No binaries permitted for carrot-cdm: https://files.pythonhosted.org/packages/c2/4b/9375e7641ba0846edd5b7606ce555b43fc27f48ac0b6864a24178913897a/carrot_cdm-0.6.7-py3-none-any.whl (from https://pypi.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:27,781 Fetching project page and analyzing links: https://www.piwheels.org/simple/carrot-cdm/ 2023-02-27T16:31:27,782 Getting page https://www.piwheels.org/simple/carrot-cdm/ 2023-02-27T16:31:27,784 Found index url https://www.piwheels.org/simple 2023-02-27T16:31:28,052 Fetched page https://www.piwheels.org/simple/carrot-cdm/ as text/html 2023-02-27T16:31:28,058 Skipping link: No binaries permitted for carrot-cdm: https://www.piwheels.org/simple/carrot-cdm/carrot_cdm-0.6.6.1-py3-none-any.whl#sha256=c30ac28c6611a765a71a49ca2eae6ea7d85f4436e190be2a9a3fe930f3172fb7 (from https://www.piwheels.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:28,058 Skipping link: No binaries permitted for carrot-cdm: https://www.piwheels.org/simple/carrot-cdm/carrot_cdm-0.6.6-py3-none-any.whl#sha256=7b929bd8e4739196f58b7f29acf1bb9fc83b4df44358f2fb2475a82eea152147 (from https://www.piwheels.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:28,059 Skipping link: No binaries permitted for carrot-cdm: https://www.piwheels.org/simple/carrot-cdm/carrot_cdm-0.6.5-py3-none-any.whl#sha256=b82bee6537f0c56b238713ef24fbdce1b2511391604261d38ab9a748f91746e7 (from https://www.piwheels.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:28,059 Skipping link: No binaries permitted for carrot-cdm: https://www.piwheels.org/simple/carrot-cdm/carrot_cdm-0.6.4-py3-none-any.whl#sha256=b1c94312af88c21a3b1f965471a2b2bb76ab57d3d660217865c2dad5d1e4b99a (from https://www.piwheels.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:28,060 Skipping link: No binaries permitted for carrot-cdm: https://www.piwheels.org/simple/carrot-cdm/carrot_cdm-0.6.3-py3-none-any.whl#sha256=39239603bf82d193df75e74636f7c3c0f438ae9c1444c6d8435b5b4884a9d247 (from https://www.piwheels.org/simple/carrot-cdm/) (requires-python:>=3.6) 2023-02-27T16:31:28,060 Skipping link: not a file: https://www.piwheels.org/simple/carrot-cdm/ 2023-02-27T16:31:28,061 Skipping link: not a file: https://pypi.org/simple/carrot-cdm/ 2023-02-27T16:31:28,096 Given no hashes to check 1 links for project 'carrot-cdm': discarding no candidates 2023-02-27T16:31:28,126 Collecting carrot-cdm==0.6.7 2023-02-27T16:31:28,131 Created temporary directory: /tmp/pip-unpack-3ot34wjp 2023-02-27T16:31:28,427 Downloading carrot-cdm-0.6.7.tar.gz (72 kB) 2023-02-27T16:31:28,799 Added carrot-cdm==0.6.7 from https://files.pythonhosted.org/packages/77/04/7016325d3b2128c51e9b60fe0bd8b37bd99130c5f8a515066324ce586d94/carrot-cdm-0.6.7.tar.gz to build tracker '/tmp/pip-build-tracker-xcohim42' 2023-02-27T16:31:28,802 Running setup.py (path:/tmp/pip-wheel-hdse4ysm/carrot-cdm_f265911e83d94af49320d3ee12e2359b/setup.py) egg_info for package carrot-cdm 2023-02-27T16:31:28,803 Created temporary directory: /tmp/pip-pip-egg-info-x2h0rcov 2023-02-27T16:31:28,804 Preparing metadata (setup.py): started 2023-02-27T16:31:28,806 Running command python setup.py egg_info 2023-02-27T16:31:29,914 LICENSE 2023-02-27T16:31:29,916 PKG-INFO 2023-02-27T16:31:29,916 README.md 2023-02-27T16:31:29,916 carrot 2023-02-27T16:31:29,917 carrot_cdm.egg-info 2023-02-27T16:31:29,917 setup.cfg 2023-02-27T16:31:29,917 setup.py 2023-02-27T16:31:30,376 All documentation relating to the CaRROT-CDM builder can be found here: 2023-02-27T16:31:30,377 ## [https://hdruk.github.io/CaRROT-Docs/CaRROT-CDM/About/](https://hdruk.github.io/CaRROT-Docs/CaRROT-CDM/About/) 2023-02-27T16:31:30,378 running egg_info 2023-02-27T16:31:30,380 creating /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info 2023-02-27T16:31:30,441 writing /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/PKG-INFO 2023-02-27T16:31:30,446 writing dependency_links to /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/dependency_links.txt 2023-02-27T16:31:30,449 writing entry points to /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/entry_points.txt 2023-02-27T16:31:30,453 writing requirements to /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/requires.txt 2023-02-27T16:31:30,455 writing top-level names to /tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/top_level.txt 2023-02-27T16:31:30,458 writing manifest file '/tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/SOURCES.txt' 2023-02-27T16:31:30,668 reading manifest file '/tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/SOURCES.txt' 2023-02-27T16:31:30,672 adding license file 'LICENSE' 2023-02-27T16:31:30,681 writing manifest file '/tmp/pip-pip-egg-info-x2h0rcov/carrot_cdm.egg-info/SOURCES.txt' 2023-02-27T16:31:30,802 Preparing metadata (setup.py): finished with status 'done' 2023-02-27T16:31:30,815 Source in /tmp/pip-wheel-hdse4ysm/carrot-cdm_f265911e83d94af49320d3ee12e2359b has version 0.6.7, which satisfies requirement carrot-cdm==0.6.7 from https://files.pythonhosted.org/packages/77/04/7016325d3b2128c51e9b60fe0bd8b37bd99130c5f8a515066324ce586d94/carrot-cdm-0.6.7.tar.gz 2023-02-27T16:31:30,817 Removed carrot-cdm==0.6.7 from https://files.pythonhosted.org/packages/77/04/7016325d3b2128c51e9b60fe0bd8b37bd99130c5f8a515066324ce586d94/carrot-cdm-0.6.7.tar.gz from build tracker '/tmp/pip-build-tracker-xcohim42' 2023-02-27T16:31:30,831 Created temporary directory: /tmp/pip-unpack-tns1bnu5 2023-02-27T16:31:30,833 Building wheels for collected packages: carrot-cdm 2023-02-27T16:31:30,842 Created temporary directory: /tmp/pip-wheel-hmdh0iab 2023-02-27T16:31:30,842 Building wheel for carrot-cdm (setup.py): started 2023-02-27T16:31:30,844 Destination directory: /tmp/pip-wheel-hmdh0iab 2023-02-27T16:31:30,845 Running command python setup.py bdist_wheel 2023-02-27T16:31:31,905 All documentation relating to the CaRROT-CDM builder can be found here: 2023-02-27T16:31:31,907 ## [https://hdruk.github.io/CaRROT-Docs/CaRROT-CDM/About/](https://hdruk.github.io/CaRROT-Docs/CaRROT-CDM/About/) 2023-02-27T16:31:31,932 LICENSE 2023-02-27T16:31:31,933 PKG-INFO 2023-02-27T16:31:31,933 README.md 2023-02-27T16:31:31,933 carrot 2023-02-27T16:31:31,934 carrot_cdm.egg-info 2023-02-27T16:31:31,934 setup.cfg 2023-02-27T16:31:31,934 setup.py 2023-02-27T16:31:32,870 running bdist_wheel 2023-02-27T16:31:33,598 running build 2023-02-27T16:31:33,599 running build_py 2023-02-27T16:31:33,670 creating build 2023-02-27T16:31:33,671 creating build/lib 2023-02-27T16:31:33,674 creating build/lib/carrot 2023-02-27T16:31:33,676 copying carrot/_version.py -> build/lib/carrot 2023-02-27T16:31:33,681 copying carrot/__init__.py -> build/lib/carrot 2023-02-27T16:31:33,686 creating build/lib/carrot/cli 2023-02-27T16:31:33,689 copying carrot/cli/__init__.py -> build/lib/carrot/cli 2023-02-27T16:31:33,693 copying carrot/cli/cli.py -> build/lib/carrot/cli 2023-02-27T16:31:33,698 creating build/lib/carrot/analyses 2023-02-27T16:31:33,700 copying carrot/analyses/__init__.py -> build/lib/carrot/analyses 2023-02-27T16:31:33,705 copying carrot/analyses/example_serology.py -> build/lib/carrot/analyses 2023-02-27T16:31:33,711 creating build/lib/carrot/cdm 2023-02-27T16:31:33,714 copying carrot/cdm/decorators.py -> build/lib/carrot/cdm 2023-02-27T16:31:33,718 copying carrot/cdm/model.py -> build/lib/carrot/cdm 2023-02-27T16:31:33,724 copying carrot/cdm/__init__.py -> build/lib/carrot/cdm 2023-02-27T16:31:33,729 copying carrot/cdm/operations.py -> build/lib/carrot/cdm 2023-02-27T16:31:33,735 creating build/lib/carrot/tools 2023-02-27T16:31:33,738 copying carrot/tools/metrics.py -> build/lib/carrot/tools 2023-02-27T16:31:33,743 copying carrot/tools/dag.py -> build/lib/carrot/tools 2023-02-27T16:31:33,748 copying carrot/tools/profiling.py -> build/lib/carrot/tools 2023-02-27T16:31:33,752 copying carrot/tools/bclink_helpers.py -> build/lib/carrot/tools 2023-02-27T16:31:33,758 copying carrot/tools/rules_helpers.py -> build/lib/carrot/tools 2023-02-27T16:31:33,763 copying carrot/tools/file_helpers.py -> build/lib/carrot/tools 2023-02-27T16:31:33,768 copying carrot/tools/mappingrules.py -> build/lib/carrot/tools 2023-02-27T16:31:33,772 copying carrot/tools/__init__.py -> build/lib/carrot/tools 2023-02-27T16:31:33,777 copying carrot/tools/logger.py -> build/lib/carrot/tools 2023-02-27T16:31:33,781 copying carrot/tools/omopcdm.py -> build/lib/carrot/tools 2023-02-27T16:31:33,787 copying carrot/tools/bash_helpers.py -> build/lib/carrot/tools 2023-02-27T16:31:33,792 creating build/lib/carrot/io 2023-02-27T16:31:33,795 copying carrot/io/common.py -> build/lib/carrot/io 2023-02-27T16:31:33,800 copying carrot/io/__init__.py -> build/lib/carrot/io 2023-02-27T16:31:33,806 creating build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,809 copying carrot/cli/subcommands/get.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,814 copying carrot/cli/subcommands/run.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,820 copying carrot/cli/subcommands/etl.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,828 copying carrot/cli/subcommands/generate.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,833 copying carrot/cli/subcommands/__init__.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,837 copying carrot/cli/subcommands/display.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,842 copying carrot/cli/subcommands/info.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,846 copying carrot/cli/subcommands/search.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,851 copying carrot/cli/subcommands/pseudonymise.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,855 copying carrot/cli/subcommands/airflow.py -> build/lib/carrot/cli/subcommands 2023-02-27T16:31:33,859 creating build/lib/carrot/cdm/objects 2023-02-27T16:31:33,862 copying carrot/cdm/objects/common.py -> build/lib/carrot/cdm/objects 2023-02-27T16:31:33,867 copying carrot/cdm/objects/__init__.py -> build/lib/carrot/cdm/objects 2023-02-27T16:31:33,872 creating build/lib/carrot/cdm/classes 2023-02-27T16:31:33,873 copying carrot/cdm/classes/__init__.py -> build/lib/carrot/cdm/classes 2023-02-27T16:31:33,878 creating build/lib/carrot/cdm/objects/versions 2023-02-27T16:31:33,879 copying carrot/cdm/objects/versions/__init__.py -> build/lib/carrot/cdm/objects/versions 2023-02-27T16:31:33,885 creating build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,887 copying carrot/cdm/objects/versions/v5_3_1/person.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,892 copying carrot/cdm/objects/versions/v5_3_1/condition_occurrence.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,896 copying carrot/cdm/objects/versions/v5_3_1/visit_occurrence.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,899 copying carrot/cdm/objects/versions/v5_3_1/drug_exposure.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,903 copying carrot/cdm/objects/versions/v5_3_1/procedure_occurrence.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,907 copying carrot/cdm/objects/versions/v5_3_1/specimen.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,911 copying carrot/cdm/objects/versions/v5_3_1/death.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,915 copying carrot/cdm/objects/versions/v5_3_1/__init__.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,918 copying carrot/cdm/objects/versions/v5_3_1/measurement.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,922 copying carrot/cdm/objects/versions/v5_3_1/observation.py -> build/lib/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:33,927 creating build/lib/carrot/tools/extract 2023-02-27T16:31:33,929 copying carrot/tools/extract/templates.py -> build/lib/carrot/tools/extract 2023-02-27T16:31:33,933 copying carrot/tools/extract/__init__.py -> build/lib/carrot/tools/extract 2023-02-27T16:31:33,939 creating build/lib/carrot/io/plugins 2023-02-27T16:31:33,941 copying carrot/io/plugins/sql.py -> build/lib/carrot/io/plugins 2023-02-27T16:31:33,945 copying carrot/io/plugins/local.py -> build/lib/carrot/io/plugins 2023-02-27T16:31:33,950 copying carrot/io/plugins/bclink.py -> build/lib/carrot/io/plugins 2023-02-27T16:31:33,954 copying carrot/io/plugins/__init__.py -> build/lib/carrot/io/plugins 2023-02-27T16:31:33,957 running egg_info 2023-02-27T16:31:34,103 writing carrot_cdm.egg-info/PKG-INFO 2023-02-27T16:31:34,108 writing dependency_links to carrot_cdm.egg-info/dependency_links.txt 2023-02-27T16:31:34,113 writing entry points to carrot_cdm.egg-info/entry_points.txt 2023-02-27T16:31:34,116 writing requirements to carrot_cdm.egg-info/requires.txt 2023-02-27T16:31:34,119 writing top-level names to carrot_cdm.egg-info/top_level.txt 2023-02-27T16:31:34,209 reading manifest file 'carrot_cdm.egg-info/SOURCES.txt' 2023-02-27T16:31:34,217 adding license file 'LICENSE' 2023-02-27T16:31:34,229 writing manifest file 'carrot_cdm.egg-info/SOURCES.txt' 2023-02-27T16:31:34,323 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-02-27T16:31:34,323 setuptools.SetuptoolsDeprecationWarning, 2023-02-27T16:31:34,388 installing to build/bdist.linux-armv7l/wheel 2023-02-27T16:31:34,389 running install 2023-02-27T16:31:34,449 running install_lib 2023-02-27T16:31:34,515 creating build/bdist.linux-armv7l 2023-02-27T16:31:34,516 creating build/bdist.linux-armv7l/wheel 2023-02-27T16:31:34,521 creating build/bdist.linux-armv7l/wheel/carrot 2023-02-27T16:31:34,524 copying build/lib/carrot/_version.py -> build/bdist.linux-armv7l/wheel/carrot 2023-02-27T16:31:34,529 creating build/bdist.linux-armv7l/wheel/carrot/cli 2023-02-27T16:31:34,533 creating build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,536 copying build/lib/carrot/cli/subcommands/get.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,542 copying build/lib/carrot/cli/subcommands/run.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,549 copying build/lib/carrot/cli/subcommands/etl.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,556 copying build/lib/carrot/cli/subcommands/generate.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,562 copying build/lib/carrot/cli/subcommands/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,566 copying build/lib/carrot/cli/subcommands/display.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,571 copying build/lib/carrot/cli/subcommands/info.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,575 copying build/lib/carrot/cli/subcommands/search.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,579 copying build/lib/carrot/cli/subcommands/pseudonymise.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,584 copying build/lib/carrot/cli/subcommands/airflow.py -> build/bdist.linux-armv7l/wheel/carrot/cli/subcommands 2023-02-27T16:31:34,588 copying build/lib/carrot/cli/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cli 2023-02-27T16:31:34,592 copying build/lib/carrot/cli/cli.py -> build/bdist.linux-armv7l/wheel/carrot/cli 2023-02-27T16:31:34,597 creating build/bdist.linux-armv7l/wheel/carrot/analyses 2023-02-27T16:31:34,599 copying build/lib/carrot/analyses/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/analyses 2023-02-27T16:31:34,604 copying build/lib/carrot/analyses/example_serology.py -> build/bdist.linux-armv7l/wheel/carrot/analyses 2023-02-27T16:31:34,610 creating build/bdist.linux-armv7l/wheel/carrot/cdm 2023-02-27T16:31:34,613 creating build/bdist.linux-armv7l/wheel/carrot/cdm/objects 2023-02-27T16:31:34,616 copying build/lib/carrot/cdm/objects/common.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects 2023-02-27T16:31:34,622 copying build/lib/carrot/cdm/objects/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects 2023-02-27T16:31:34,628 creating build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions 2023-02-27T16:31:34,632 creating build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,635 copying build/lib/carrot/cdm/objects/versions/v5_3_1/person.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,640 copying build/lib/carrot/cdm/objects/versions/v5_3_1/condition_occurrence.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,645 copying build/lib/carrot/cdm/objects/versions/v5_3_1/visit_occurrence.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,649 copying build/lib/carrot/cdm/objects/versions/v5_3_1/drug_exposure.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,654 copying build/lib/carrot/cdm/objects/versions/v5_3_1/procedure_occurrence.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,659 copying build/lib/carrot/cdm/objects/versions/v5_3_1/specimen.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,664 copying build/lib/carrot/cdm/objects/versions/v5_3_1/death.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,668 copying build/lib/carrot/cdm/objects/versions/v5_3_1/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,672 copying build/lib/carrot/cdm/objects/versions/v5_3_1/measurement.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,677 copying build/lib/carrot/cdm/objects/versions/v5_3_1/observation.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions/v5_3_1 2023-02-27T16:31:34,681 copying build/lib/carrot/cdm/objects/versions/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/objects/versions 2023-02-27T16:31:34,686 creating build/bdist.linux-armv7l/wheel/carrot/cdm/classes 2023-02-27T16:31:34,689 copying build/lib/carrot/cdm/classes/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cdm/classes 2023-02-27T16:31:34,692 copying build/lib/carrot/cdm/decorators.py -> build/bdist.linux-armv7l/wheel/carrot/cdm 2023-02-27T16:31:34,697 copying build/lib/carrot/cdm/model.py -> build/bdist.linux-armv7l/wheel/carrot/cdm 2023-02-27T16:31:34,703 copying build/lib/carrot/cdm/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/cdm 2023-02-27T16:31:34,706 copying build/lib/carrot/cdm/operations.py -> build/bdist.linux-armv7l/wheel/carrot/cdm 2023-02-27T16:31:34,710 copying build/lib/carrot/__init__.py -> build/bdist.linux-armv7l/wheel/carrot 2023-02-27T16:31:34,715 creating build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,716 copying build/lib/carrot/tools/metrics.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,720 copying build/lib/carrot/tools/dag.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,725 copying build/lib/carrot/tools/profiling.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,729 creating build/bdist.linux-armv7l/wheel/carrot/tools/extract 2023-02-27T16:31:34,731 copying build/lib/carrot/tools/extract/templates.py -> build/bdist.linux-armv7l/wheel/carrot/tools/extract 2023-02-27T16:31:34,735 copying build/lib/carrot/tools/extract/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/tools/extract 2023-02-27T16:31:34,739 copying build/lib/carrot/tools/bclink_helpers.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,744 copying build/lib/carrot/tools/rules_helpers.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,748 copying build/lib/carrot/tools/file_helpers.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,752 copying build/lib/carrot/tools/mappingrules.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,756 copying build/lib/carrot/tools/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,760 copying build/lib/carrot/tools/logger.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,764 copying build/lib/carrot/tools/omopcdm.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,768 copying build/lib/carrot/tools/bash_helpers.py -> build/bdist.linux-armv7l/wheel/carrot/tools 2023-02-27T16:31:34,772 creating build/bdist.linux-armv7l/wheel/carrot/io 2023-02-27T16:31:34,774 copying build/lib/carrot/io/common.py -> build/bdist.linux-armv7l/wheel/carrot/io 2023-02-27T16:31:34,780 creating build/bdist.linux-armv7l/wheel/carrot/io/plugins 2023-02-27T16:31:34,781 copying build/lib/carrot/io/plugins/sql.py -> build/bdist.linux-armv7l/wheel/carrot/io/plugins 2023-02-27T16:31:34,785 copying build/lib/carrot/io/plugins/local.py -> build/bdist.linux-armv7l/wheel/carrot/io/plugins 2023-02-27T16:31:34,789 copying build/lib/carrot/io/plugins/bclink.py -> build/bdist.linux-armv7l/wheel/carrot/io/plugins 2023-02-27T16:31:34,793 copying build/lib/carrot/io/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/io/plugins 2023-02-27T16:31:34,796 copying build/lib/carrot/io/__init__.py -> build/bdist.linux-armv7l/wheel/carrot/io 2023-02-27T16:31:34,799 running install_egg_info 2023-02-27T16:31:34,873 Copying carrot_cdm.egg-info to build/bdist.linux-armv7l/wheel/carrot_cdm-0.6.7-py3.7.egg-info 2023-02-27T16:31:34,896 running install_scripts 2023-02-27T16:31:34,942 creating build/bdist.linux-armv7l/wheel/carrot_cdm-0.6.7.dist-info/WHEEL 2023-02-27T16:31:34,948 creating '/tmp/pip-wheel-hmdh0iab/carrot_cdm-0.6.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-27T16:31:34,953 adding 'carrot/__init__.py' 2023-02-27T16:31:34,956 adding 'carrot/_version.py' 2023-02-27T16:31:34,959 adding 'carrot/analyses/__init__.py' 2023-02-27T16:31:34,962 adding 'carrot/analyses/example_serology.py' 2023-02-27T16:31:34,965 adding 'carrot/cdm/__init__.py' 2023-02-27T16:31:34,968 adding 'carrot/cdm/decorators.py' 2023-02-27T16:31:34,979 adding 'carrot/cdm/model.py' 2023-02-27T16:31:34,983 adding 'carrot/cdm/operations.py' 2023-02-27T16:31:34,986 adding 'carrot/cdm/classes/__init__.py' 2023-02-27T16:31:34,990 adding 'carrot/cdm/objects/__init__.py' 2023-02-27T16:31:34,996 adding 'carrot/cdm/objects/common.py' 2023-02-27T16:31:34,999 adding 'carrot/cdm/objects/versions/__init__.py' 2023-02-27T16:31:35,003 adding 'carrot/cdm/objects/versions/v5_3_1/__init__.py' 2023-02-27T16:31:35,006 adding 'carrot/cdm/objects/versions/v5_3_1/condition_occurrence.py' 2023-02-27T16:31:35,009 adding 'carrot/cdm/objects/versions/v5_3_1/death.py' 2023-02-27T16:31:35,012 adding 'carrot/cdm/objects/versions/v5_3_1/drug_exposure.py' 2023-02-27T16:31:35,014 adding 'carrot/cdm/objects/versions/v5_3_1/measurement.py' 2023-02-27T16:31:35,017 adding 'carrot/cdm/objects/versions/v5_3_1/observation.py' 2023-02-27T16:31:35,020 adding 'carrot/cdm/objects/versions/v5_3_1/person.py' 2023-02-27T16:31:35,023 adding 'carrot/cdm/objects/versions/v5_3_1/procedure_occurrence.py' 2023-02-27T16:31:35,026 adding 'carrot/cdm/objects/versions/v5_3_1/specimen.py' 2023-02-27T16:31:35,028 adding 'carrot/cdm/objects/versions/v5_3_1/visit_occurrence.py' 2023-02-27T16:31:35,032 adding 'carrot/cli/__init__.py' 2023-02-27T16:31:35,035 adding 'carrot/cli/cli.py' 2023-02-27T16:31:35,038 adding 'carrot/cli/subcommands/__init__.py' 2023-02-27T16:31:35,041 adding 'carrot/cli/subcommands/airflow.py' 2023-02-27T16:31:35,044 adding 'carrot/cli/subcommands/display.py' 2023-02-27T16:31:35,057 adding 'carrot/cli/subcommands/etl.py' 2023-02-27T16:31:35,064 adding 'carrot/cli/subcommands/generate.py' 2023-02-27T16:31:35,068 adding 'carrot/cli/subcommands/get.py' 2023-02-27T16:31:35,071 adding 'carrot/cli/subcommands/info.py' 2023-02-27T16:31:35,074 adding 'carrot/cli/subcommands/pseudonymise.py' 2023-02-27T16:31:35,085 adding 'carrot/cli/subcommands/run.py' 2023-02-27T16:31:35,088 adding 'carrot/cli/subcommands/search.py' 2023-02-27T16:31:35,092 adding 'carrot/io/__init__.py' 2023-02-27T16:31:35,095 adding 'carrot/io/common.py' 2023-02-27T16:31:35,099 adding 'carrot/io/plugins/__init__.py' 2023-02-27T16:31:35,102 adding 'carrot/io/plugins/bclink.py' 2023-02-27T16:31:35,105 adding 'carrot/io/plugins/local.py' 2023-02-27T16:31:35,108 adding 'carrot/io/plugins/sql.py' 2023-02-27T16:31:35,112 adding 'carrot/tools/__init__.py' 2023-02-27T16:31:35,115 adding 'carrot/tools/bash_helpers.py' 2023-02-27T16:31:35,120 adding 'carrot/tools/bclink_helpers.py' 2023-02-27T16:31:35,125 adding 'carrot/tools/dag.py' 2023-02-27T16:31:35,129 adding 'carrot/tools/file_helpers.py' 2023-02-27T16:31:35,132 adding 'carrot/tools/logger.py' 2023-02-27T16:31:35,135 adding 'carrot/tools/mappingrules.py' 2023-02-27T16:31:35,138 adding 'carrot/tools/metrics.py' 2023-02-27T16:31:35,141 adding 'carrot/tools/omopcdm.py' 2023-02-27T16:31:35,145 adding 'carrot/tools/profiling.py' 2023-02-27T16:31:35,148 adding 'carrot/tools/rules_helpers.py' 2023-02-27T16:31:35,152 adding 'carrot/tools/extract/__init__.py' 2023-02-27T16:31:35,155 adding 'carrot/tools/extract/templates.py' 2023-02-27T16:31:35,160 adding 'carrot_cdm-0.6.7.dist-info/LICENSE' 2023-02-27T16:31:35,162 adding 'carrot_cdm-0.6.7.dist-info/METADATA' 2023-02-27T16:31:35,164 adding 'carrot_cdm-0.6.7.dist-info/WHEEL' 2023-02-27T16:31:35,166 adding 'carrot_cdm-0.6.7.dist-info/entry_points.txt' 2023-02-27T16:31:35,168 adding 'carrot_cdm-0.6.7.dist-info/top_level.txt' 2023-02-27T16:31:35,172 adding 'carrot_cdm-0.6.7.dist-info/RECORD' 2023-02-27T16:31:35,178 removing build/bdist.linux-armv7l/wheel 2023-02-27T16:31:35,386 Building wheel for carrot-cdm (setup.py): finished with status 'done' 2023-02-27T16:31:35,396 Created wheel for carrot-cdm: filename=carrot_cdm-0.6.7-py3-none-any.whl size=90838 sha256=7470effa789545cf1ed22dfe41bb784e79fc0899faa69a124bb904b21191a7a8 2023-02-27T16:31:35,398 Stored in directory: /tmp/pip-ephem-wheel-cache-zxhrqg64/wheels/df/22/c4/0e591aaf8ecf4712154baba66623fdf4a23fb25c5f45e5e076 2023-02-27T16:31:35,429 Successfully built carrot-cdm 2023-02-27T16:31:35,444 Removed build tracker: '/tmp/pip-build-tracker-xcohim42'