2023-02-28T06:09:57,037 Created temporary directory: /tmp/pip-ephem-wheel-cache-q1ualzfj 2023-02-28T06:09:57,042 Created temporary directory: /tmp/pip-build-tracker-_i4fo5gs 2023-02-28T06:09:57,043 Initialized build tracking at /tmp/pip-build-tracker-_i4fo5gs 2023-02-28T06:09:57,043 Created build tracker: /tmp/pip-build-tracker-_i4fo5gs 2023-02-28T06:09:57,044 Entered build tracker: /tmp/pip-build-tracker-_i4fo5gs 2023-02-28T06:09:57,045 Created temporary directory: /tmp/pip-wheel-txaq5g61 2023-02-28T06:09:57,055 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-28T06:09:57,061 Created temporary directory: /tmp/pip-ephem-wheel-cache-gs9tike7 2023-02-28T06:09:57,121 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-28T06:09:57,128 2 location(s) to search for versions of singlecellexperiment: 2023-02-28T06:09:57,128 * https://pypi.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,128 * https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,129 Fetching project page and analyzing links: https://pypi.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,130 Getting page https://pypi.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,134 Found index url https://pypi.org/simple 2023-02-28T06:09:57,320 Fetched page https://pypi.org/simple/singlecellexperiment/ as application/vnd.pypi.simple.v1+json 2023-02-28T06:09:57,328 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/06/22/dc7ff7a9cbb849320db55483824aa238639983004a3384e3cbb56fe1b55c/SingleCellExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,328 Found link https://files.pythonhosted.org/packages/4f/c7/2f87f03dc0a39652929e596b999610770d5a2ad3c98c9d4eda99ac6ad1fc/SingleCellExperiment-0.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.1 2023-02-28T06:09:57,329 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/12/17/fdf09ec58f3668dedd84dd72d7f33e9a39b92641c71419a31ba4b11fd93f/SingleCellExperiment-0.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,330 Found link https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2 2023-02-28T06:09:57,330 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/39/57/e51f288c79b8ceab3e3256bf280bea555114a5f69043fcd3079c61bc0c3a/SingleCellExperiment-0.2.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,331 Found link https://files.pythonhosted.org/packages/e6/16/21b02cd4340a21322d8f0393955aa35b917e5a3771293b7754897e44d7dd/SingleCellExperiment-0.2.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.1 2023-02-28T06:09:57,332 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/db/ba/9e1dc2767aa10eb42ccfd538a2f3f5a4e6fa6e50abda9df14e142606c1ce/SingleCellExperiment-0.2.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,332 Found link https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.2 2023-02-28T06:09:57,333 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/c7/95/91f1348839c55d478f9bd55165dbe3a80b33542a66a6c2d060bf30dd39b8/SingleCellExperiment-0.2.3-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,333 Found link https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.3 2023-02-28T06:09:57,334 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/26/3f/a5b3987566df7f1f7d2813a867e61905c0de12927283eed6b9dea80453af/SingleCellExperiment-0.2.4-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,335 Found link https://files.pythonhosted.org/packages/86/3c/225b1d20037de71ffb5e7da70c4054c920653f9d0d5b9356a909c0c54a01/SingleCellExperiment-0.2.4.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.4 2023-02-28T06:09:57,335 Fetching project page and analyzing links: https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,336 Getting page https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,338 Found index url https://www.piwheels.org/simple 2023-02-28T06:09:57,743 Fetched page https://www.piwheels.org/simple/singlecellexperiment/ as text/html 2023-02-28T06:09:57,753 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.3-py3-none-any.whl#sha256=2e07a3126c601d37f155a55c3a06f37e8a02682d018134f280b6967a1a52c6bc (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,754 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.2-py3-none-any.whl#sha256=bebfd5697c376b98a2cd4ccf7a10b257390d8711dd7b46cde48f2550545bf09e (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,754 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.1-py3-none-any.whl#sha256=79346b13d2b934a5e3ea35c048ac23d7cf2655855f8b490272d0861daf232df9 (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,755 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2-py3-none-any.whl#sha256=a65a3769c1131ce8b3960c77dfebb0d0a4684a3c6e27ee1b7f5b3a6412615ffb (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,755 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.1-py3-none-any.whl#sha256=3f769bcfff226d0998e8ad6fb4dff2e44710993eb3067a315d50b3031efb1e4f (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-02-28T06:09:57,756 Skipping link: not a file: https://www.piwheels.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,756 Skipping link: not a file: https://pypi.org/simple/singlecellexperiment/ 2023-02-28T06:09:57,790 Given no hashes to check 1 links for project 'singlecellexperiment': discarding no candidates 2023-02-28T06:09:57,820 Collecting singlecellexperiment==0.2.4 2023-02-28T06:09:57,825 Created temporary directory: /tmp/pip-unpack-daaxgwqv 2023-02-28T06:09:58,529 Downloading SingleCellExperiment-0.2.4.tar.gz (1.1 MB) 2023-02-28T06:09:59,095 Added singlecellexperiment==0.2.4 from https://files.pythonhosted.org/packages/86/3c/225b1d20037de71ffb5e7da70c4054c920653f9d0d5b9356a909c0c54a01/SingleCellExperiment-0.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-_i4fo5gs' 2023-02-28T06:09:59,109 Created temporary directory: /tmp/pip-build-env-_uy0jioj 2023-02-28T06:09:59,129 Installing build dependencies: started 2023-02-28T06:09:59,131 Running command pip subprocess to install build dependencies 2023-02-28T06:10:01,933 Using pip 23.0.1 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-02-28T06:10:03,181 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-02-28T06:10:03,241 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-02-28T06:10:07,174 Collecting setuptools>=46.1.0 2023-02-28T06:10:07,418 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB) 2023-02-28T06:10:08,413 Collecting setuptools_scm[toml]>=5 2023-02-28T06:10:08,477 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-02-28T06:10:09,002 Collecting wheel 2023-02-28T06:10:09,035 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-02-28T06:10:09,377 Collecting typing-extensions 2023-02-28T06:10:09,452 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.5.0-py3-none-any.whl (27 kB) 2023-02-28T06:10:10,399 Collecting importlib-metadata 2023-02-28T06:10:10,430 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.0.0-py3-none-any.whl (21 kB) 2023-02-28T06:10:10,736 Collecting tomli>=1.0.0 2023-02-28T06:10:10,789 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-02-28T06:10:11,205 Collecting packaging>=20.0 2023-02-28T06:10:11,239 Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB) 2023-02-28T06:10:13,111 Collecting zipp>=0.5 2023-02-28T06:10:14,530 Using cached https://www.piwheels.org/simple/zipp/zipp-3.15.0-py3-none-any.whl (6.8 kB) 2023-02-28T06:10:20,112 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2023-02-28T06:10:20,453 Creating /tmp/pip-build-env-_uy0jioj/overlay/bin 2023-02-28T06:10:20,458 changing mode of /tmp/pip-build-env-_uy0jioj/overlay/bin/wheel to 755 2023-02-28T06:10:25,610 Successfully installed importlib-metadata-6.0.0 packaging-23.0 setuptools-67.4.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.5.0 wheel-0.38.4 zipp-3.15.0 2023-02-28T06:10:26,618 Installing build dependencies: finished with status 'done' 2023-02-28T06:10:26,629 Getting requirements to build wheel: started 2023-02-28T06:10:26,633 Running command Getting requirements to build wheel 2023-02-28T06:10:28,435 running egg_info 2023-02-28T06:10:28,449 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-02-28T06:10:28,453 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-28T06:10:28,459 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-02-28T06:10:28,461 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-02-28T06:10:28,585 listing git files failed - pretending there aren't any 2023-02-28T06:10:28,604 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:28,615 adding license file 'LICENSE.txt' 2023-02-28T06:10:28,624 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:28,762 Getting requirements to build wheel: finished with status 'done' 2023-02-28T06:10:28,790 Created temporary directory: /tmp/pip-modern-metadata-fffchk92 2023-02-28T06:10:28,796 Preparing metadata (pyproject.toml): started 2023-02-28T06:10:28,798 Running command Preparing metadata (pyproject.toml) 2023-02-28T06:10:30,310 running dist_info 2023-02-28T06:10:30,352 creating /tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info 2023-02-28T06:10:30,366 writing /tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/PKG-INFO 2023-02-28T06:10:30,371 writing dependency_links to /tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-28T06:10:30,376 writing requirements to /tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/requires.txt 2023-02-28T06:10:30,378 writing top-level names to /tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/top_level.txt 2023-02-28T06:10:30,381 writing manifest file '/tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:30,504 listing git files failed - pretending there aren't any 2023-02-28T06:10:30,522 reading manifest file '/tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:30,529 adding license file 'LICENSE.txt' 2023-02-28T06:10:30,536 writing manifest file '/tmp/pip-modern-metadata-fffchk92/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:30,538 creating '/tmp/pip-modern-metadata-fffchk92/SingleCellExperiment-0.2.4.dist-info' 2023-02-28T06:10:31,093 Preparing metadata (pyproject.toml): finished with status 'done' 2023-02-28T06:10:31,107 Source in /tmp/pip-wheel-txaq5g61/singlecellexperiment_75752c0cad7145a38b76828f1e4110df has version 0.2.4, which satisfies requirement singlecellexperiment==0.2.4 from https://files.pythonhosted.org/packages/86/3c/225b1d20037de71ffb5e7da70c4054c920653f9d0d5b9356a909c0c54a01/SingleCellExperiment-0.2.4.tar.gz 2023-02-28T06:10:31,109 Removed singlecellexperiment==0.2.4 from https://files.pythonhosted.org/packages/86/3c/225b1d20037de71ffb5e7da70c4054c920653f9d0d5b9356a909c0c54a01/SingleCellExperiment-0.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-_i4fo5gs' 2023-02-28T06:10:31,118 Created temporary directory: /tmp/pip-unpack-h613f1uc 2023-02-28T06:10:31,120 Building wheels for collected packages: singlecellexperiment 2023-02-28T06:10:31,129 Created temporary directory: /tmp/pip-wheel-35m5hcmg 2023-02-28T06:10:31,130 Destination directory: /tmp/pip-wheel-35m5hcmg 2023-02-28T06:10:31,135 Building wheel for singlecellexperiment (pyproject.toml): started 2023-02-28T06:10:31,137 Running command Building wheel for singlecellexperiment (pyproject.toml) 2023-02-28T06:10:32,895 running bdist_wheel 2023-02-28T06:10:32,992 running build 2023-02-28T06:10:32,992 running build_py 2023-02-28T06:10:33,014 creating build 2023-02-28T06:10:33,015 creating build/lib 2023-02-28T06:10:33,017 creating build/lib/singlecellexperiment 2023-02-28T06:10:33,019 copying src/singlecellexperiment/SingleCellExperiment.py -> build/lib/singlecellexperiment 2023-02-28T06:10:33,024 copying src/singlecellexperiment/__init__.py -> build/lib/singlecellexperiment 2023-02-28T06:10:33,028 creating build/lib/singlecellexperiment/io 2023-02-28T06:10:33,030 copying src/singlecellexperiment/io/tenx.py -> build/lib/singlecellexperiment/io 2023-02-28T06:10:33,033 copying src/singlecellexperiment/io/__init__.py -> build/lib/singlecellexperiment/io 2023-02-28T06:10:33,037 copying src/singlecellexperiment/io/anndata.py -> build/lib/singlecellexperiment/io 2023-02-28T06:10:33,040 running egg_info 2023-02-28T06:10:33,089 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-02-28T06:10:33,092 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-02-28T06:10:33,096 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-02-28T06:10:33,098 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-02-28T06:10:33,181 listing git files failed - pretending there aren't any 2023-02-28T06:10:33,201 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:33,208 adding license file 'LICENSE.txt' 2023-02-28T06:10:33,218 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-02-28T06:10:33,270 installing to build/bdist.linux-armv7l/wheel 2023-02-28T06:10:33,271 running install 2023-02-28T06:10:33,332 running install_lib 2023-02-28T06:10:33,351 creating build/bdist.linux-armv7l 2023-02-28T06:10:33,352 creating build/bdist.linux-armv7l/wheel 2023-02-28T06:10:33,355 creating build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-28T06:10:33,358 copying build/lib/singlecellexperiment/SingleCellExperiment.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-28T06:10:33,363 copying build/lib/singlecellexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-02-28T06:10:33,367 creating build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-28T06:10:33,369 copying build/lib/singlecellexperiment/io/tenx.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-28T06:10:33,373 copying build/lib/singlecellexperiment/io/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-28T06:10:33,377 copying build/lib/singlecellexperiment/io/anndata.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-02-28T06:10:33,380 running install_egg_info 2023-02-28T06:10:33,402 Copying src/SingleCellExperiment.egg-info to build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.4-py3.7.egg-info 2023-02-28T06:10:33,424 running install_scripts 2023-02-28T06:10:33,460 creating build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.4.dist-info/WHEEL 2023-02-28T06:10:33,465 creating '/tmp/pip-wheel-35m5hcmg/.tmp-0qos5j0r/SingleCellExperiment-0.2.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-02-28T06:10:33,476 adding 'singlecellexperiment/SingleCellExperiment.py' 2023-02-28T06:10:33,479 adding 'singlecellexperiment/__init__.py' 2023-02-28T06:10:33,483 adding 'singlecellexperiment/io/__init__.py' 2023-02-28T06:10:33,486 adding 'singlecellexperiment/io/anndata.py' 2023-02-28T06:10:33,489 adding 'singlecellexperiment/io/tenx.py' 2023-02-28T06:10:33,491 adding 'SingleCellExperiment-0.2.4.dist-info/LICENSE.txt' 2023-02-28T06:10:33,493 adding 'SingleCellExperiment-0.2.4.dist-info/METADATA' 2023-02-28T06:10:33,495 adding 'SingleCellExperiment-0.2.4.dist-info/WHEEL' 2023-02-28T06:10:33,497 adding 'SingleCellExperiment-0.2.4.dist-info/top_level.txt' 2023-02-28T06:10:33,499 adding 'SingleCellExperiment-0.2.4.dist-info/RECORD' 2023-02-28T06:10:33,501 removing build/bdist.linux-armv7l/wheel 2023-02-28T06:10:33,679 Building wheel for singlecellexperiment (pyproject.toml): finished with status 'done' 2023-02-28T06:10:33,691 Created wheel for singlecellexperiment: filename=SingleCellExperiment-0.2.4-py3-none-any.whl size=8704 sha256=47efbd0ede1392ee8f9c4777c21a6002f50c186bbb9f10e26d8de43e03165906 2023-02-28T06:10:33,693 Stored in directory: /tmp/pip-ephem-wheel-cache-gs9tike7/wheels/62/ce/21/4d6685b4fa65280cba080624a2550a9858fc30e665ecfea85a 2023-02-28T06:10:33,718 Successfully built singlecellexperiment 2023-02-28T06:10:33,725 Removed build tracker: '/tmp/pip-build-tracker-_i4fo5gs'