2023-03-01T23:17:14,359 Created temporary directory: /tmp/pip-ephem-wheel-cache-ahaoqd0z 2023-03-01T23:17:14,365 Created temporary directory: /tmp/pip-build-tracker-cwznzt__ 2023-03-01T23:17:14,365 Initialized build tracking at /tmp/pip-build-tracker-cwznzt__ 2023-03-01T23:17:14,366 Created build tracker: /tmp/pip-build-tracker-cwznzt__ 2023-03-01T23:17:14,366 Entered build tracker: /tmp/pip-build-tracker-cwznzt__ 2023-03-01T23:17:14,367 Created temporary directory: /tmp/pip-wheel-b2ht2t59 2023-03-01T23:17:14,378 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-01T23:17:14,384 Created temporary directory: /tmp/pip-ephem-wheel-cache-guppbgdd 2023-03-01T23:17:14,438 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-01T23:17:14,445 2 location(s) to search for versions of mdml: 2023-03-01T23:17:14,445 * https://pypi.org/simple/mdml/ 2023-03-01T23:17:14,445 * https://www.piwheels.org/simple/mdml/ 2023-03-01T23:17:14,446 Fetching project page and analyzing links: https://pypi.org/simple/mdml/ 2023-03-01T23:17:14,447 Getting page https://pypi.org/simple/mdml/ 2023-03-01T23:17:14,451 Found index url https://pypi.org/simple 2023-03-01T23:17:14,636 Fetched page https://pypi.org/simple/mdml/ as application/vnd.pypi.simple.v1+json 2023-03-01T23:17:14,640 Skipping link: No binaries permitted for mdml: https://files.pythonhosted.org/packages/30/15/f4a90b7b97282296f709855d804a67af86a973ec4aa2d70a9053a86b1453/MDML-0.0.1-py3-none-any.whl (from https://pypi.org/simple/mdml/) 2023-03-01T23:17:14,641 Found link https://files.pythonhosted.org/packages/7d/90/0c1da427c50cda488fb1a7d23314bed1f1a42f018cbd6dd932e6fe4f5cd2/MDML-0.0.1.tar.gz (from https://pypi.org/simple/mdml/), version: 0.0.1 2023-03-01T23:17:14,641 Skipping link: No binaries permitted for mdml: https://files.pythonhosted.org/packages/ec/ea/ffea1bcdf516951be83d0c3ffc7c9162eea55a52255f9f612ce865f38648/MDML-0.0.2-py3-none-any.whl (from https://pypi.org/simple/mdml/) 2023-03-01T23:17:14,642 Found link https://files.pythonhosted.org/packages/f0/34/043e8b9a5d761088072dd7257c871c600d50fb3dcdaa4e415204046bb0a2/MDML-0.0.2.tar.gz (from https://pypi.org/simple/mdml/), version: 0.0.2 2023-03-01T23:17:14,643 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdml/ 2023-03-01T23:17:14,643 Getting page https://www.piwheels.org/simple/mdml/ 2023-03-01T23:17:14,646 Found index url https://www.piwheels.org/simple 2023-03-01T23:17:14,870 Fetched page https://www.piwheels.org/simple/mdml/ as text/html 2023-03-01T23:17:14,872 Skipping link: not a file: https://www.piwheels.org/simple/mdml/ 2023-03-01T23:17:14,872 Skipping link: not a file: https://pypi.org/simple/mdml/ 2023-03-01T23:17:14,910 Given no hashes to check 1 links for project 'mdml': discarding no candidates 2023-03-01T23:17:14,940 Collecting mdml==0.0.1 2023-03-01T23:17:14,945 Created temporary directory: /tmp/pip-unpack-0v788l0a 2023-03-01T23:17:15,193 Downloading MDML-0.0.1.tar.gz (2.0 MB) 2023-03-01T23:17:16,120 Added mdml==0.0.1 from https://files.pythonhosted.org/packages/7d/90/0c1da427c50cda488fb1a7d23314bed1f1a42f018cbd6dd932e6fe4f5cd2/MDML-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-cwznzt__' 2023-03-01T23:17:16,123 Running setup.py (path:/tmp/pip-wheel-b2ht2t59/mdml_e88e2ffce9884bebb3cf6fe6334f4085/setup.py) egg_info for package mdml 2023-03-01T23:17:16,124 Created temporary directory: /tmp/pip-pip-egg-info-am6l_l9c 2023-03-01T23:17:16,125 Preparing metadata (setup.py): started 2023-03-01T23:17:16,127 Running command python setup.py egg_info 2023-03-01T23:17:17,860 running egg_info 2023-03-01T23:17:17,863 creating /tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info 2023-03-01T23:17:17,917 writing /tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/PKG-INFO 2023-03-01T23:17:17,921 writing dependency_links to /tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/dependency_links.txt 2023-03-01T23:17:17,929 writing requirements to /tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/requires.txt 2023-03-01T23:17:17,931 writing top-level names to /tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/top_level.txt 2023-03-01T23:17:17,934 writing manifest file '/tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/SOURCES.txt' 2023-03-01T23:17:18,109 reading manifest file '/tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/SOURCES.txt' 2023-03-01T23:17:18,112 reading manifest template 'MANIFEST.in' 2023-03-01T23:17:18,117 warning: no files found matching '*.yml' 2023-03-01T23:17:18,123 adding license file 'LICENSE' 2023-03-01T23:17:18,129 writing manifest file '/tmp/pip-pip-egg-info-am6l_l9c/MDML.egg-info/SOURCES.txt' 2023-03-01T23:17:18,247 Preparing metadata (setup.py): finished with status 'done' 2023-03-01T23:17:18,264 Source in /tmp/pip-wheel-b2ht2t59/mdml_e88e2ffce9884bebb3cf6fe6334f4085 has version 0.0.1, which satisfies requirement mdml==0.0.1 from https://files.pythonhosted.org/packages/7d/90/0c1da427c50cda488fb1a7d23314bed1f1a42f018cbd6dd932e6fe4f5cd2/MDML-0.0.1.tar.gz 2023-03-01T23:17:18,266 Removed mdml==0.0.1 from https://files.pythonhosted.org/packages/7d/90/0c1da427c50cda488fb1a7d23314bed1f1a42f018cbd6dd932e6fe4f5cd2/MDML-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-cwznzt__' 2023-03-01T23:17:18,282 Created temporary directory: /tmp/pip-unpack-no6szlkv 2023-03-01T23:17:18,283 Building wheels for collected packages: mdml 2023-03-01T23:17:18,293 Created temporary directory: /tmp/pip-wheel-xcxoy4xh 2023-03-01T23:17:18,293 Building wheel for mdml (setup.py): started 2023-03-01T23:17:18,295 Destination directory: /tmp/pip-wheel-xcxoy4xh 2023-03-01T23:17:18,296 Running command python setup.py bdist_wheel 2023-03-01T23:17:20,506 running bdist_wheel 2023-03-01T23:17:20,666 running build 2023-03-01T23:17:20,667 running build_py 2023-03-01T23:17:20,731 creating build 2023-03-01T23:17:20,732 creating build/lib 2023-03-01T23:17:20,733 creating build/lib/Deeplearn 2023-03-01T23:17:20,735 copying Deeplearn/fit.py -> build/lib/Deeplearn 2023-03-01T23:17:20,740 copying Deeplearn/setup.py -> build/lib/Deeplearn 2023-03-01T23:17:20,743 copying Deeplearn/plot.py -> build/lib/Deeplearn 2023-03-01T23:17:20,746 copying Deeplearn/__init__.py -> build/lib/Deeplearn 2023-03-01T23:17:20,751 creating build/lib/Vision 2023-03-01T23:17:20,753 copying Vision/saliency_map.py -> build/lib/Vision 2023-03-01T23:17:20,757 copying Vision/cam.py -> build/lib/Vision 2023-03-01T23:17:20,761 copying Vision/__init__.py -> build/lib/Vision 2023-03-01T23:17:20,766 creating build/lib/Utils 2023-03-01T23:17:20,768 copying Utils/utils.py -> build/lib/Utils 2023-03-01T23:17:20,772 copying Utils/__init__.py -> build/lib/Utils 2023-03-01T23:17:20,777 creating build/lib/TrajectoryTools 2023-03-01T23:17:20,779 copying TrajectoryTools/loader.py -> build/lib/TrajectoryTools 2023-03-01T23:17:20,783 copying TrajectoryTools/tools.py -> build/lib/TrajectoryTools 2023-03-01T23:17:20,786 copying TrajectoryTools/parse.py -> build/lib/TrajectoryTools 2023-03-01T23:17:20,790 copying TrajectoryTools/__init__.py -> build/lib/TrajectoryTools 2023-03-01T23:17:20,795 creating build/lib/Statistics 2023-03-01T23:17:20,796 copying Statistics/rmsd.py -> build/lib/Statistics 2023-03-01T23:17:20,800 copying Statistics/__init__.py -> build/lib/Statistics 2023-03-01T23:17:20,804 copying Statistics/rmsf.py -> build/lib/Statistics 2023-03-01T23:17:20,809 creating build/lib/Retrace 2023-03-01T23:17:20,811 copying Retrace/Mapper.py -> build/lib/Retrace 2023-03-01T23:17:20,815 copying Retrace/plot.py -> build/lib/Retrace 2023-03-01T23:17:20,818 copying Retrace/__init__.py -> build/lib/Retrace 2023-03-01T23:17:20,823 creating build/lib/Allign 2023-03-01T23:17:20,824 copying Allign/Alligner.py -> build/lib/Allign 2023-03-01T23:17:20,828 copying Allign/__init__.py -> build/lib/Allign 2023-03-01T23:17:20,901 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-01T23:17:20,901 setuptools.SetuptoolsDeprecationWarning, 2023-03-01T23:17:20,956 installing to build/bdist.linux-armv7l/wheel 2023-03-01T23:17:20,956 running install 2023-03-01T23:17:21,017 running install_lib 2023-03-01T23:17:21,073 creating build/bdist.linux-armv7l 2023-03-01T23:17:21,074 creating build/bdist.linux-armv7l/wheel 2023-03-01T23:17:21,077 creating build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:17:21,079 copying build/lib/Deeplearn/fit.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:17:21,084 copying build/lib/Deeplearn/setup.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:17:21,087 copying build/lib/Deeplearn/plot.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:17:21,091 copying build/lib/Deeplearn/__init__.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:17:21,096 creating build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:17:21,098 copying build/lib/Vision/saliency_map.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:17:21,102 copying build/lib/Vision/cam.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:17:21,107 copying build/lib/Vision/__init__.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:17:21,111 creating build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:17:21,113 copying build/lib/Utils/utils.py -> build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:17:21,117 copying build/lib/Utils/__init__.py -> build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:17:21,122 creating build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:17:21,124 copying build/lib/TrajectoryTools/loader.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:17:21,128 copying build/lib/TrajectoryTools/tools.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:17:21,132 copying build/lib/TrajectoryTools/parse.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:17:21,136 copying build/lib/TrajectoryTools/__init__.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:17:21,141 creating build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:17:21,142 copying build/lib/Statistics/rmsd.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:17:21,147 copying build/lib/Statistics/__init__.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:17:21,150 copying build/lib/Statistics/rmsf.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:17:21,155 creating build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:17:21,157 copying build/lib/Retrace/Mapper.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:17:21,161 copying build/lib/Retrace/plot.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:17:21,165 copying build/lib/Retrace/__init__.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:17:21,170 creating build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:17:21,172 copying build/lib/Allign/Alligner.py -> build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:17:21,176 copying build/lib/Allign/__init__.py -> build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:17:21,179 running install_egg_info 2023-03-01T23:17:21,316 running egg_info 2023-03-01T23:17:21,367 writing MDML.egg-info/PKG-INFO 2023-03-01T23:17:21,371 writing dependency_links to MDML.egg-info/dependency_links.txt 2023-03-01T23:17:21,386 writing requirements to MDML.egg-info/requires.txt 2023-03-01T23:17:21,391 writing top-level names to MDML.egg-info/top_level.txt 2023-03-01T23:17:21,455 reading manifest file 'MDML.egg-info/SOURCES.txt' 2023-03-01T23:17:21,461 reading manifest template 'MANIFEST.in' 2023-03-01T23:17:21,465 warning: no files found matching '*.yml' 2023-03-01T23:17:21,470 adding license file 'LICENSE' 2023-03-01T23:17:21,478 writing manifest file 'MDML.egg-info/SOURCES.txt' 2023-03-01T23:17:21,481 Copying MDML.egg-info to build/bdist.linux-armv7l/wheel/MDML-0.0.1-py3.7.egg-info 2023-03-01T23:17:21,501 running install_scripts 2023-03-01T23:17:21,776 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-03-01T23:17:21,786 creating build/bdist.linux-armv7l/wheel/MDML-0.0.1.dist-info/WHEEL 2023-03-01T23:17:21,791 creating '/tmp/pip-wheel-xcxoy4xh/MDML-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-01T23:17:21,797 adding 'Allign/Alligner.py' 2023-03-01T23:17:21,800 adding 'Allign/__init__.py' 2023-03-01T23:17:21,803 adding 'Deeplearn/__init__.py' 2023-03-01T23:17:21,806 adding 'Deeplearn/fit.py' 2023-03-01T23:17:21,808 adding 'Deeplearn/plot.py' 2023-03-01T23:17:21,811 adding 'Deeplearn/setup.py' 2023-03-01T23:17:21,817 adding 'Retrace/Mapper.py' 2023-03-01T23:17:21,820 adding 'Retrace/__init__.py' 2023-03-01T23:17:21,822 adding 'Retrace/plot.py' 2023-03-01T23:17:21,826 adding 'Statistics/__init__.py' 2023-03-01T23:17:21,829 adding 'Statistics/rmsd.py' 2023-03-01T23:17:21,831 adding 'Statistics/rmsf.py' 2023-03-01T23:17:21,835 adding 'TrajectoryTools/__init__.py' 2023-03-01T23:17:21,837 adding 'TrajectoryTools/loader.py' 2023-03-01T23:17:21,840 adding 'TrajectoryTools/parse.py' 2023-03-01T23:17:21,843 adding 'TrajectoryTools/tools.py' 2023-03-01T23:17:21,846 adding 'Utils/__init__.py' 2023-03-01T23:17:21,849 adding 'Utils/utils.py' 2023-03-01T23:17:21,853 adding 'Vision/__init__.py' 2023-03-01T23:17:21,856 adding 'Vision/cam.py' 2023-03-01T23:17:21,859 adding 'Vision/saliency_map.py' 2023-03-01T23:17:21,861 adding 'MDML-0.0.1.dist-info/LICENSE' 2023-03-01T23:17:21,865 adding 'MDML-0.0.1.dist-info/METADATA' 2023-03-01T23:17:21,867 adding 'MDML-0.0.1.dist-info/WHEEL' 2023-03-01T23:17:21,869 adding 'MDML-0.0.1.dist-info/top_level.txt' 2023-03-01T23:17:21,870 adding 'MDML-0.0.1.dist-info/RECORD' 2023-03-01T23:17:21,873 removing build/bdist.linux-armv7l/wheel 2023-03-01T23:17:22,038 Building wheel for mdml (setup.py): finished with status 'done' 2023-03-01T23:17:22,045 Created wheel for mdml: filename=MDML-0.0.1-py3-none-any.whl size=16904 sha256=f7859f0df45ef159eaa16ed860acc33eec4261582b79bf80b0de0181d73f29b8 2023-03-01T23:17:22,048 Stored in directory: /tmp/pip-ephem-wheel-cache-guppbgdd/wheels/69/79/5f/656969eb4813981d1c20dd77fdcaf1521cb9686ab35e4fad53 2023-03-01T23:17:22,081 Successfully built mdml 2023-03-01T23:17:22,089 Removed build tracker: '/tmp/pip-build-tracker-cwznzt__'