2023-03-01T23:18:12,171 Created temporary directory: /tmp/pip-ephem-wheel-cache-3kubt4nu 2023-03-01T23:18:12,176 Created temporary directory: /tmp/pip-build-tracker-s9l9lq8f 2023-03-01T23:18:12,177 Initialized build tracking at /tmp/pip-build-tracker-s9l9lq8f 2023-03-01T23:18:12,178 Created build tracker: /tmp/pip-build-tracker-s9l9lq8f 2023-03-01T23:18:12,178 Entered build tracker: /tmp/pip-build-tracker-s9l9lq8f 2023-03-01T23:18:12,179 Created temporary directory: /tmp/pip-wheel-xjyqd0ad 2023-03-01T23:18:12,189 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-01T23:18:12,195 Created temporary directory: /tmp/pip-ephem-wheel-cache-zzn8wzv7 2023-03-01T23:18:12,249 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-01T23:18:12,255 2 location(s) to search for versions of mdml: 2023-03-01T23:18:12,255 * https://pypi.org/simple/mdml/ 2023-03-01T23:18:12,255 * https://www.piwheels.org/simple/mdml/ 2023-03-01T23:18:12,257 Fetching project page and analyzing links: https://pypi.org/simple/mdml/ 2023-03-01T23:18:12,258 Getting page https://pypi.org/simple/mdml/ 2023-03-01T23:18:12,262 Found index url https://pypi.org/simple 2023-03-01T23:18:12,367 Fetched page https://pypi.org/simple/mdml/ as application/vnd.pypi.simple.v1+json 2023-03-01T23:18:12,371 Skipping link: No binaries permitted for mdml: https://files.pythonhosted.org/packages/30/15/f4a90b7b97282296f709855d804a67af86a973ec4aa2d70a9053a86b1453/MDML-0.0.1-py3-none-any.whl (from https://pypi.org/simple/mdml/) 2023-03-01T23:18:12,372 Found link https://files.pythonhosted.org/packages/7d/90/0c1da427c50cda488fb1a7d23314bed1f1a42f018cbd6dd932e6fe4f5cd2/MDML-0.0.1.tar.gz (from https://pypi.org/simple/mdml/), version: 0.0.1 2023-03-01T23:18:12,372 Skipping link: No binaries permitted for mdml: https://files.pythonhosted.org/packages/ec/ea/ffea1bcdf516951be83d0c3ffc7c9162eea55a52255f9f612ce865f38648/MDML-0.0.2-py3-none-any.whl (from https://pypi.org/simple/mdml/) 2023-03-01T23:18:12,373 Found link https://files.pythonhosted.org/packages/f0/34/043e8b9a5d761088072dd7257c871c600d50fb3dcdaa4e415204046bb0a2/MDML-0.0.2.tar.gz (from https://pypi.org/simple/mdml/), version: 0.0.2 2023-03-01T23:18:12,374 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdml/ 2023-03-01T23:18:12,374 Getting page https://www.piwheels.org/simple/mdml/ 2023-03-01T23:18:12,376 Found index url https://www.piwheels.org/simple 2023-03-01T23:18:12,612 Fetched page https://www.piwheels.org/simple/mdml/ as text/html 2023-03-01T23:18:12,614 Skipping link: not a file: https://www.piwheels.org/simple/mdml/ 2023-03-01T23:18:12,614 Skipping link: not a file: https://pypi.org/simple/mdml/ 2023-03-01T23:18:12,651 Given no hashes to check 1 links for project 'mdml': discarding no candidates 2023-03-01T23:18:12,681 Collecting mdml==0.0.2 2023-03-01T23:18:12,686 Created temporary directory: /tmp/pip-unpack-ziohm2uo 2023-03-01T23:18:12,940 Downloading MDML-0.0.2.tar.gz (2.0 MB) 2023-03-01T23:18:13,950 Added mdml==0.0.2 from https://files.pythonhosted.org/packages/f0/34/043e8b9a5d761088072dd7257c871c600d50fb3dcdaa4e415204046bb0a2/MDML-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-s9l9lq8f' 2023-03-01T23:18:13,954 Running setup.py (path:/tmp/pip-wheel-xjyqd0ad/mdml_f3055e1eb44e4da0868d04ce14faaf21/setup.py) egg_info for package mdml 2023-03-01T23:18:13,955 Created temporary directory: /tmp/pip-pip-egg-info-pv887yki 2023-03-01T23:18:13,956 Preparing metadata (setup.py): started 2023-03-01T23:18:13,958 Running command python setup.py egg_info 2023-03-01T23:18:15,685 running egg_info 2023-03-01T23:18:15,687 creating /tmp/pip-pip-egg-info-pv887yki/MDML.egg-info 2023-03-01T23:18:15,741 writing /tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/PKG-INFO 2023-03-01T23:18:15,746 writing dependency_links to /tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/dependency_links.txt 2023-03-01T23:18:15,753 writing requirements to /tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/requires.txt 2023-03-01T23:18:15,756 writing top-level names to /tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/top_level.txt 2023-03-01T23:18:15,759 writing manifest file '/tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/SOURCES.txt' 2023-03-01T23:18:15,930 reading manifest file '/tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/SOURCES.txt' 2023-03-01T23:18:15,933 reading manifest template 'MANIFEST.in' 2023-03-01T23:18:15,938 warning: no files found matching '*.yml' 2023-03-01T23:18:15,944 adding license file 'LICENSE' 2023-03-01T23:18:15,950 writing manifest file '/tmp/pip-pip-egg-info-pv887yki/MDML.egg-info/SOURCES.txt' 2023-03-01T23:18:16,067 Preparing metadata (setup.py): finished with status 'done' 2023-03-01T23:18:16,085 Source in /tmp/pip-wheel-xjyqd0ad/mdml_f3055e1eb44e4da0868d04ce14faaf21 has version 0.0.2, which satisfies requirement mdml==0.0.2 from https://files.pythonhosted.org/packages/f0/34/043e8b9a5d761088072dd7257c871c600d50fb3dcdaa4e415204046bb0a2/MDML-0.0.2.tar.gz 2023-03-01T23:18:16,086 Removed mdml==0.0.2 from https://files.pythonhosted.org/packages/f0/34/043e8b9a5d761088072dd7257c871c600d50fb3dcdaa4e415204046bb0a2/MDML-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-s9l9lq8f' 2023-03-01T23:18:16,103 Created temporary directory: /tmp/pip-unpack-bt6nlfkv 2023-03-01T23:18:16,104 Building wheels for collected packages: mdml 2023-03-01T23:18:16,113 Created temporary directory: /tmp/pip-wheel-k96alsat 2023-03-01T23:18:16,114 Building wheel for mdml (setup.py): started 2023-03-01T23:18:16,116 Destination directory: /tmp/pip-wheel-k96alsat 2023-03-01T23:18:16,117 Running command python setup.py bdist_wheel 2023-03-01T23:18:18,283 running bdist_wheel 2023-03-01T23:18:18,441 running build 2023-03-01T23:18:18,442 running build_py 2023-03-01T23:18:18,505 creating build 2023-03-01T23:18:18,506 creating build/lib 2023-03-01T23:18:18,507 creating build/lib/Deeplearn 2023-03-01T23:18:18,510 copying Deeplearn/fit.py -> build/lib/Deeplearn 2023-03-01T23:18:18,514 copying Deeplearn/setup.py -> build/lib/Deeplearn 2023-03-01T23:18:18,517 copying Deeplearn/plot.py -> build/lib/Deeplearn 2023-03-01T23:18:18,521 copying Deeplearn/__init__.py -> build/lib/Deeplearn 2023-03-01T23:18:18,525 creating build/lib/Vision 2023-03-01T23:18:18,527 copying Vision/saliency_map.py -> build/lib/Vision 2023-03-01T23:18:18,531 copying Vision/cam.py -> build/lib/Vision 2023-03-01T23:18:18,535 copying Vision/__init__.py -> build/lib/Vision 2023-03-01T23:18:18,540 creating build/lib/Utils 2023-03-01T23:18:18,542 copying Utils/utils.py -> build/lib/Utils 2023-03-01T23:18:18,546 copying Utils/__init__.py -> build/lib/Utils 2023-03-01T23:18:18,551 creating build/lib/TrajectoryTools 2023-03-01T23:18:18,553 copying TrajectoryTools/loader.py -> build/lib/TrajectoryTools 2023-03-01T23:18:18,557 copying TrajectoryTools/tools.py -> build/lib/TrajectoryTools 2023-03-01T23:18:18,560 copying TrajectoryTools/parse.py -> build/lib/TrajectoryTools 2023-03-01T23:18:18,564 copying TrajectoryTools/__init__.py -> build/lib/TrajectoryTools 2023-03-01T23:18:18,568 creating build/lib/Statistics 2023-03-01T23:18:18,570 copying Statistics/rmsd.py -> build/lib/Statistics 2023-03-01T23:18:18,574 copying Statistics/__init__.py -> build/lib/Statistics 2023-03-01T23:18:18,578 copying Statistics/rmsf.py -> build/lib/Statistics 2023-03-01T23:18:18,583 creating build/lib/Retrace 2023-03-01T23:18:18,585 copying Retrace/Mapper.py -> build/lib/Retrace 2023-03-01T23:18:18,589 copying Retrace/plot.py -> build/lib/Retrace 2023-03-01T23:18:18,592 copying Retrace/__init__.py -> build/lib/Retrace 2023-03-01T23:18:18,597 creating build/lib/Allign 2023-03-01T23:18:18,598 copying Allign/Alligner.py -> build/lib/Allign 2023-03-01T23:18:18,602 copying Allign/__init__.py -> build/lib/Allign 2023-03-01T23:18:18,675 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-01T23:18:18,676 setuptools.SetuptoolsDeprecationWarning, 2023-03-01T23:18:18,730 installing to build/bdist.linux-armv7l/wheel 2023-03-01T23:18:18,731 running install 2023-03-01T23:18:18,791 running install_lib 2023-03-01T23:18:18,849 creating build/bdist.linux-armv7l 2023-03-01T23:18:18,850 creating build/bdist.linux-armv7l/wheel 2023-03-01T23:18:18,853 creating build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:18:18,856 copying build/lib/Deeplearn/fit.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:18:18,860 copying build/lib/Deeplearn/setup.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:18:18,864 copying build/lib/Deeplearn/plot.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:18:18,868 copying build/lib/Deeplearn/__init__.py -> build/bdist.linux-armv7l/wheel/Deeplearn 2023-03-01T23:18:18,873 creating build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:18:18,876 copying build/lib/Vision/saliency_map.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:18:18,880 copying build/lib/Vision/cam.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:18:18,885 copying build/lib/Vision/__init__.py -> build/bdist.linux-armv7l/wheel/Vision 2023-03-01T23:18:18,891 creating build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:18:18,893 copying build/lib/Utils/utils.py -> build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:18:18,897 copying build/lib/Utils/__init__.py -> build/bdist.linux-armv7l/wheel/Utils 2023-03-01T23:18:18,903 creating build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:18:18,905 copying build/lib/TrajectoryTools/loader.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:18:18,910 copying build/lib/TrajectoryTools/tools.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:18:18,914 copying build/lib/TrajectoryTools/parse.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:18:18,918 copying build/lib/TrajectoryTools/__init__.py -> build/bdist.linux-armv7l/wheel/TrajectoryTools 2023-03-01T23:18:18,924 creating build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:18:18,926 copying build/lib/Statistics/rmsd.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:18:18,931 copying build/lib/Statistics/__init__.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:18:18,935 copying build/lib/Statistics/rmsf.py -> build/bdist.linux-armv7l/wheel/Statistics 2023-03-01T23:18:18,940 creating build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:18:18,942 copying build/lib/Retrace/Mapper.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:18:18,947 copying build/lib/Retrace/plot.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:18:18,952 copying build/lib/Retrace/__init__.py -> build/bdist.linux-armv7l/wheel/Retrace 2023-03-01T23:18:18,956 creating build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:18:18,958 copying build/lib/Allign/Alligner.py -> build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:18:18,962 copying build/lib/Allign/__init__.py -> build/bdist.linux-armv7l/wheel/Allign 2023-03-01T23:18:18,966 running install_egg_info 2023-03-01T23:18:19,104 running egg_info 2023-03-01T23:18:19,157 writing MDML.egg-info/PKG-INFO 2023-03-01T23:18:19,162 writing dependency_links to MDML.egg-info/dependency_links.txt 2023-03-01T23:18:19,169 writing requirements to MDML.egg-info/requires.txt 2023-03-01T23:18:19,172 writing top-level names to MDML.egg-info/top_level.txt 2023-03-01T23:18:19,237 reading manifest file 'MDML.egg-info/SOURCES.txt' 2023-03-01T23:18:19,243 reading manifest template 'MANIFEST.in' 2023-03-01T23:18:19,247 warning: no files found matching '*.yml' 2023-03-01T23:18:19,253 adding license file 'LICENSE' 2023-03-01T23:18:19,260 writing manifest file 'MDML.egg-info/SOURCES.txt' 2023-03-01T23:18:19,263 Copying MDML.egg-info to build/bdist.linux-armv7l/wheel/MDML-0.0.2-py3.7.egg-info 2023-03-01T23:18:19,282 running install_scripts 2023-03-01T23:18:19,567 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-03-01T23:18:19,576 creating build/bdist.linux-armv7l/wheel/MDML-0.0.2.dist-info/WHEEL 2023-03-01T23:18:19,581 creating '/tmp/pip-wheel-k96alsat/MDML-0.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-01T23:18:19,586 adding 'Allign/Alligner.py' 2023-03-01T23:18:19,588 adding 'Allign/__init__.py' 2023-03-01T23:18:19,592 adding 'Deeplearn/__init__.py' 2023-03-01T23:18:19,594 adding 'Deeplearn/fit.py' 2023-03-01T23:18:19,597 adding 'Deeplearn/plot.py' 2023-03-01T23:18:19,600 adding 'Deeplearn/setup.py' 2023-03-01T23:18:19,606 adding 'Retrace/Mapper.py' 2023-03-01T23:18:19,608 adding 'Retrace/__init__.py' 2023-03-01T23:18:19,610 adding 'Retrace/plot.py' 2023-03-01T23:18:19,614 adding 'Statistics/__init__.py' 2023-03-01T23:18:19,617 adding 'Statistics/rmsd.py' 2023-03-01T23:18:19,619 adding 'Statistics/rmsf.py' 2023-03-01T23:18:19,623 adding 'TrajectoryTools/__init__.py' 2023-03-01T23:18:19,626 adding 'TrajectoryTools/loader.py' 2023-03-01T23:18:19,628 adding 'TrajectoryTools/parse.py' 2023-03-01T23:18:19,631 adding 'TrajectoryTools/tools.py' 2023-03-01T23:18:19,634 adding 'Utils/__init__.py' 2023-03-01T23:18:19,637 adding 'Utils/utils.py' 2023-03-01T23:18:19,640 adding 'Vision/__init__.py' 2023-03-01T23:18:19,644 adding 'Vision/cam.py' 2023-03-01T23:18:19,646 adding 'Vision/saliency_map.py' 2023-03-01T23:18:19,649 adding 'MDML-0.0.2.dist-info/LICENSE' 2023-03-01T23:18:19,653 adding 'MDML-0.0.2.dist-info/METADATA' 2023-03-01T23:18:19,656 adding 'MDML-0.0.2.dist-info/WHEEL' 2023-03-01T23:18:19,658 adding 'MDML-0.0.2.dist-info/top_level.txt' 2023-03-01T23:18:19,659 adding 'MDML-0.0.2.dist-info/RECORD' 2023-03-01T23:18:19,662 removing build/bdist.linux-armv7l/wheel 2023-03-01T23:18:19,827 Building wheel for mdml (setup.py): finished with status 'done' 2023-03-01T23:18:19,834 Created wheel for mdml: filename=MDML-0.0.2-py3-none-any.whl size=18781 sha256=a8065e452a78225ead64efb40c65ffb3aeda0014ce3433a1ad307699f39447c9 2023-03-01T23:18:19,837 Stored in directory: /tmp/pip-ephem-wheel-cache-zzn8wzv7/wheels/48/69/1a/1dc9882888460306d6c78b1c0803f48354cfb08a55480f02a5 2023-03-01T23:18:19,870 Successfully built mdml 2023-03-01T23:18:19,877 Removed build tracker: '/tmp/pip-build-tracker-s9l9lq8f'