2023-03-02T11:10:28,972 Created temporary directory: /tmp/pip-ephem-wheel-cache-vhwmi4fo 2023-03-02T11:10:28,974 Created temporary directory: /tmp/pip-build-tracker-rvtxe9lk 2023-03-02T11:10:28,975 Initialized build tracking at /tmp/pip-build-tracker-rvtxe9lk 2023-03-02T11:10:28,975 Created build tracker: /tmp/pip-build-tracker-rvtxe9lk 2023-03-02T11:10:28,975 Entered build tracker: /tmp/pip-build-tracker-rvtxe9lk 2023-03-02T11:10:28,976 Created temporary directory: /tmp/pip-wheel-9e8sq_51 2023-03-02T11:10:28,980 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-02T11:10:28,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-qzubi28_ 2023-03-02T11:10:29,013 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-02T11:10:29,016 2 location(s) to search for versions of pydeseq2: 2023-03-02T11:10:29,016 * https://pypi.org/simple/pydeseq2/ 2023-03-02T11:10:29,016 * https://www.piwheels.org/simple/pydeseq2/ 2023-03-02T11:10:29,017 Fetching project page and analyzing links: https://pypi.org/simple/pydeseq2/ 2023-03-02T11:10:29,017 Getting page https://pypi.org/simple/pydeseq2/ 2023-03-02T11:10:29,019 Found index url https://pypi.org/simple 2023-03-02T11:10:29,070 Fetched page https://pypi.org/simple/pydeseq2/ as application/vnd.pypi.simple.v1+json 2023-03-02T11:10:29,073 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/6a/d8/27fabf02eb93ff3d5738cc2a9e632ce3121e0192fa70ec526978b695f4b3/pydeseq2-0.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,073 Found link https://files.pythonhosted.org/packages/f9/6e/e6330bb9e8587541662ca4c31244e8c648c5ccd2c6e2a8741c44104064fe/pydeseq2-0.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1 2023-03-02T11:10:29,074 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/84/f4/63dccc1353d615b6fe138cc5b9d4131e60f810ffd5f470f7503db1b53ac8/pydeseq2-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,074 Found link https://files.pythonhosted.org/packages/c9/ff/f26e18a599e5bb281dbff538e1574efb82371ffeab31250551af75e66a8c/pydeseq2-0.1.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1.1 2023-03-02T11:10:29,075 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/b4/e5/30779418b356b50396c191bff80616a04b74aac723760d16721eeddf5b77/pydeseq2-0.2.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,075 Found link https://files.pythonhosted.org/packages/3a/7f/b1822adefa98674d9706b37def5de30cb68394107af0088489d6377ea365/pydeseq2-0.2.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.0 2023-03-02T11:10:29,075 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/2b/ad/0d76f6d103b69f051d2e3007eed6e20921c7646f85777cbf9eff4fb97154/pydeseq2-0.2.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,076 Found link https://files.pythonhosted.org/packages/56/e5/c5fdda92bfa028a54c465373bfb776ca3693291d6ab636b1815f8cb55a76/pydeseq2-0.2.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.1 2023-03-02T11:10:29,076 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/d8/a4/368994e23cb21d04fdf1cf831a6c0001bfd494535bb5a7daa71fde8593a0/pydeseq2-0.3.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,077 Found link https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.0 2023-03-02T11:10:29,077 Fetching project page and analyzing links: https://www.piwheels.org/simple/pydeseq2/ 2023-03-02T11:10:29,077 Getting page https://www.piwheels.org/simple/pydeseq2/ 2023-03-02T11:10:29,079 Found index url https://www.piwheels.org/simple 2023-03-02T11:10:29,565 Fetched page https://www.piwheels.org/simple/pydeseq2/ as text/html 2023-03-02T11:10:29,571 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.1-py3-none-any.whl#sha256=9d7edc8169b73a5ecae9697b34b25bfc2a5bff3ace3064304f8984bb9312055b (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,571 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.0-py3-none-any.whl#sha256=f220fee41dc6e576bb134683a83411a0ea57a4dde7e8e8e5b575b017a19745c2 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,572 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1.1-py3-none-any.whl#sha256=06c9ed7baf025f588298d4475b7cab5dc8bba1b81f10274a8fb1f29ee5b91874 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,572 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1-py3-none-any.whl#sha256=7a1eac03527023d591b98915498f03e3b44f498dc2d8e3e52f56b2dfa66a7387 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-02T11:10:29,573 Skipping link: not a file: https://www.piwheels.org/simple/pydeseq2/ 2023-03-02T11:10:29,573 Skipping link: not a file: https://pypi.org/simple/pydeseq2/ 2023-03-02T11:10:29,611 Given no hashes to check 1 links for project 'pydeseq2': discarding no candidates 2023-03-02T11:10:29,638 Collecting pydeseq2==0.3.0 2023-03-02T11:10:29,642 Created temporary directory: /tmp/pip-unpack-a2_jnh9g 2023-03-02T11:10:29,843 Downloading pydeseq2-0.3.0.tar.gz (33 kB) 2023-03-02T11:10:29,903 Added pydeseq2==0.3.0 from https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-rvtxe9lk' 2023-03-02T11:10:29,908 Created temporary directory: /tmp/pip-build-env-hamh81_r 2023-03-02T11:10:29,919 Installing build dependencies: started 2023-03-02T11:10:29,920 Running command pip subprocess to install build dependencies 2023-03-02T11:10:31,125 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-03-02T11:10:31,701 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-02T11:10:31,729 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-02T11:10:36,224 Collecting setuptools>=40.8.0 2023-03-02T11:10:39,077 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB) 2023-03-02T11:10:39,358 Collecting wheel 2023-03-02T11:10:39,375 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-03-02T11:10:41,137 Installing collected packages: wheel, setuptools 2023-03-02T11:10:41,285 Creating /tmp/pip-build-env-hamh81_r/overlay/bin 2023-03-02T11:10:41,287 changing mode of /tmp/pip-build-env-hamh81_r/overlay/bin/wheel to 755 2023-03-02T11:10:43,567 Successfully installed setuptools-67.4.0 wheel-0.38.4 2023-03-02T11:10:44,050 Installing build dependencies: finished with status 'done' 2023-03-02T11:10:44,055 Getting requirements to build wheel: started 2023-03-02T11:10:44,056 Running command Getting requirements to build wheel 2023-03-02T11:10:44,671 running egg_info 2023-03-02T11:10:44,677 writing pydeseq2.egg-info/PKG-INFO 2023-03-02T11:10:44,679 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-03-02T11:10:44,682 writing requirements to pydeseq2.egg-info/requires.txt 2023-03-02T11:10:44,683 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-03-02T11:10:44,703 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:44,705 adding license file 'LICENSE' 2023-03-02T11:10:44,708 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:44,770 Getting requirements to build wheel: finished with status 'done' 2023-03-02T11:10:44,782 Created temporary directory: /tmp/pip-modern-metadata-lrruqklc 2023-03-02T11:10:44,784 Preparing metadata (pyproject.toml): started 2023-03-02T11:10:44,785 Running command Preparing metadata (pyproject.toml) 2023-03-02T11:10:45,316 running dist_info 2023-03-02T11:10:45,335 creating /tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info 2023-03-02T11:10:45,340 writing /tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/PKG-INFO 2023-03-02T11:10:45,343 writing dependency_links to /tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/dependency_links.txt 2023-03-02T11:10:45,345 writing requirements to /tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/requires.txt 2023-03-02T11:10:45,346 writing top-level names to /tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/top_level.txt 2023-03-02T11:10:45,348 writing manifest file '/tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:45,367 reading manifest file '/tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:45,369 adding license file 'LICENSE' 2023-03-02T11:10:45,371 writing manifest file '/tmp/pip-modern-metadata-lrruqklc/pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:45,372 creating '/tmp/pip-modern-metadata-lrruqklc/pydeseq2-0.3.0.dist-info' 2023-03-02T11:10:45,629 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-02T11:10:45,637 Source in /tmp/pip-wheel-9e8sq_51/pydeseq2_d49b7fca78d542618b2d00d8287a8780 has version 0.3.0, which satisfies requirement pydeseq2==0.3.0 from https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz 2023-03-02T11:10:45,637 Removed pydeseq2==0.3.0 from https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-rvtxe9lk' 2023-03-02T11:10:45,644 Created temporary directory: /tmp/pip-unpack-vezkpn_l 2023-03-02T11:10:45,644 Building wheels for collected packages: pydeseq2 2023-03-02T11:10:45,649 Created temporary directory: /tmp/pip-wheel-hf2j5zdv 2023-03-02T11:10:45,650 Destination directory: /tmp/pip-wheel-hf2j5zdv 2023-03-02T11:10:45,652 Building wheel for pydeseq2 (pyproject.toml): started 2023-03-02T11:10:45,653 Running command Building wheel for pydeseq2 (pyproject.toml) 2023-03-02T11:10:46,294 running bdist_wheel 2023-03-02T11:10:46,328 running build 2023-03-02T11:10:46,328 running build_py 2023-03-02T11:10:46,336 creating build 2023-03-02T11:10:46,336 creating build/lib 2023-03-02T11:10:46,337 creating build/lib/pydeseq2 2023-03-02T11:10:46,338 copying pydeseq2/__version__.py -> build/lib/pydeseq2 2023-03-02T11:10:46,340 copying pydeseq2/utils.py -> build/lib/pydeseq2 2023-03-02T11:10:46,343 copying pydeseq2/grid_search.py -> build/lib/pydeseq2 2023-03-02T11:10:46,345 copying pydeseq2/__init__.py -> build/lib/pydeseq2 2023-03-02T11:10:46,347 copying pydeseq2/preprocessing.py -> build/lib/pydeseq2 2023-03-02T11:10:46,349 copying pydeseq2/dds.py -> build/lib/pydeseq2 2023-03-02T11:10:46,352 copying pydeseq2/ds.py -> build/lib/pydeseq2 2023-03-02T11:10:46,370 installing to build/bdist.linux-armv7l/wheel 2023-03-02T11:10:46,370 running install 2023-03-02T11:10:46,395 running install_lib 2023-03-02T11:10:46,402 creating build/bdist.linux-armv7l 2023-03-02T11:10:46,403 creating build/bdist.linux-armv7l/wheel 2023-03-02T11:10:46,405 creating build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,406 copying build/lib/pydeseq2/__version__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,407 copying build/lib/pydeseq2/utils.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,410 copying build/lib/pydeseq2/grid_search.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,413 copying build/lib/pydeseq2/__init__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,415 copying build/lib/pydeseq2/preprocessing.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,417 copying build/lib/pydeseq2/dds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,419 copying build/lib/pydeseq2/ds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-02T11:10:46,422 running install_egg_info 2023-03-02T11:10:46,448 running egg_info 2023-03-02T11:10:46,452 writing pydeseq2.egg-info/PKG-INFO 2023-03-02T11:10:46,454 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-03-02T11:10:46,456 writing requirements to pydeseq2.egg-info/requires.txt 2023-03-02T11:10:46,457 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-03-02T11:10:46,465 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:46,467 adding license file 'LICENSE' 2023-03-02T11:10:46,469 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-02T11:10:46,471 Copying pydeseq2.egg-info to build/bdist.linux-armv7l/wheel/pydeseq2-0.3.0-py3.9.egg-info 2023-03-02T11:10:46,481 running install_scripts 2023-03-02T11:10:46,500 creating build/bdist.linux-armv7l/wheel/pydeseq2-0.3.0.dist-info/WHEEL 2023-03-02T11:10:46,502 creating '/tmp/pip-wheel-hf2j5zdv/.tmp-6po5nhco/pydeseq2-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-02T11:10:46,504 adding 'pydeseq2/__init__.py' 2023-03-02T11:10:46,506 adding 'pydeseq2/__version__.py' 2023-03-02T11:10:46,510 adding 'pydeseq2/dds.py' 2023-03-02T11:10:46,513 adding 'pydeseq2/ds.py' 2023-03-02T11:10:46,515 adding 'pydeseq2/grid_search.py' 2023-03-02T11:10:46,516 adding 'pydeseq2/preprocessing.py' 2023-03-02T11:10:46,521 adding 'pydeseq2/utils.py' 2023-03-02T11:10:46,523 adding 'pydeseq2-0.3.0.dist-info/LICENSE' 2023-03-02T11:10:46,525 adding 'pydeseq2-0.3.0.dist-info/METADATA' 2023-03-02T11:10:46,526 adding 'pydeseq2-0.3.0.dist-info/WHEEL' 2023-03-02T11:10:46,527 adding 'pydeseq2-0.3.0.dist-info/top_level.txt' 2023-03-02T11:10:46,528 adding 'pydeseq2-0.3.0.dist-info/RECORD' 2023-03-02T11:10:46,530 removing build/bdist.linux-armv7l/wheel 2023-03-02T11:10:46,615 Building wheel for pydeseq2 (pyproject.toml): finished with status 'done' 2023-03-02T11:10:46,622 Created wheel for pydeseq2: filename=pydeseq2-0.3.0-py3-none-any.whl size=29698 sha256=44a524b0ae8109930bcabffd5f4d66579bcf231856002cdd23e63459802a257f 2023-03-02T11:10:46,623 Stored in directory: /tmp/pip-ephem-wheel-cache-qzubi28_/wheels/ed/ec/81/8fc1651a67cf72b0fa7583aca2fbdacf1344a4aa73e63fcae7 2023-03-02T11:10:46,635 Successfully built pydeseq2 2023-03-02T11:10:46,640 Removed build tracker: '/tmp/pip-build-tracker-rvtxe9lk'