2023-03-02T19:12:35,977 Created temporary directory: /tmp/pip-ephem-wheel-cache-yizdrrpa 2023-03-02T19:12:35,983 Created temporary directory: /tmp/pip-build-tracker-mflrg20t 2023-03-02T19:12:35,984 Initialized build tracking at /tmp/pip-build-tracker-mflrg20t 2023-03-02T19:12:35,984 Created build tracker: /tmp/pip-build-tracker-mflrg20t 2023-03-02T19:12:35,984 Entered build tracker: /tmp/pip-build-tracker-mflrg20t 2023-03-02T19:12:35,986 Created temporary directory: /tmp/pip-wheel-cg8ulhla 2023-03-02T19:12:35,996 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-02T19:12:36,002 Created temporary directory: /tmp/pip-ephem-wheel-cache-xtfog04q 2023-03-02T19:12:36,063 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-02T19:12:36,070 2 location(s) to search for versions of cloudreg: 2023-03-02T19:12:36,070 * https://pypi.org/simple/cloudreg/ 2023-03-02T19:12:36,070 * https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:12:36,071 Fetching project page and analyzing links: https://pypi.org/simple/cloudreg/ 2023-03-02T19:12:36,072 Getting page https://pypi.org/simple/cloudreg/ 2023-03-02T19:12:36,076 Found index url https://pypi.org/simple 2023-03-02T19:12:36,263 Fetched page https://pypi.org/simple/cloudreg/ as application/vnd.pypi.simple.v1+json 2023-03-02T19:12:36,267 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/31/58/02e5ab5399300d976eb430a6c65a61cf31d8517af22205961e21d7191b55/CloudReg-1.0-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:12:36,268 Found link https://files.pythonhosted.org/packages/85/f5/d7bd22c878acf9471bc95dacd6f4a74ee00472126dc5ab950417ad24a9fe/CloudReg-1.0.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0 2023-03-02T19:12:36,269 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/df/a6/f1c2e870ec22e8eeaed1771232a9ca9c126772e630345bfa15ddc635e682/CloudReg-1.0.post2-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:12:36,269 Found link https://files.pythonhosted.org/packages/48/0a/fcc678af4c26546d9f8e0b8bdffb96c3594b80ece0e901d628b905ba1957/CloudReg-1.0.post2.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0.post2 2023-03-02T19:12:36,270 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/b6/f8/89d9ff3bdd40a07554dced1e7e3230f9ba4306a00586e9639ff2aea03910/CloudReg-1.0.1-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:12:36,270 Found link https://files.pythonhosted.org/packages/05/ea/e3d3b273fd28c6ef1b7d9f9f98470bf4a50c01b9ab85701179f6a43a7706/CloudReg-1.0.1.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0.1 2023-03-02T19:12:36,271 Fetching project page and analyzing links: https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:12:36,272 Getting page https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:12:36,274 Found index url https://www.piwheels.org/simple 2023-03-02T19:12:36,508 Fetched page https://www.piwheels.org/simple/cloudreg/ as text/html 2023-03-02T19:12:36,510 Skipping link: No binaries permitted for cloudreg: https://www.piwheels.org/simple/cloudreg/CloudReg-1.0-py3-none-any.whl#sha256=964acf72bb31670d3ea9f49c8492c4fa74d7086c4e17e6eab592015b7827f4bb (from https://www.piwheels.org/simple/cloudreg/) 2023-03-02T19:12:36,511 Skipping link: not a file: https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:12:36,512 Skipping link: not a file: https://pypi.org/simple/cloudreg/ 2023-03-02T19:12:36,546 Given no hashes to check 1 links for project 'cloudreg': discarding no candidates 2023-03-02T19:12:36,573 Collecting cloudreg==1.0.post2 2023-03-02T19:12:36,578 Created temporary directory: /tmp/pip-unpack-cf3e0j8p 2023-03-02T19:12:36,867 Downloading CloudReg-1.0.post2.tar.gz (67 kB) 2023-03-02T19:12:37,099 Added cloudreg==1.0.post2 from https://files.pythonhosted.org/packages/48/0a/fcc678af4c26546d9f8e0b8bdffb96c3594b80ece0e901d628b905ba1957/CloudReg-1.0.post2.tar.gz to build tracker '/tmp/pip-build-tracker-mflrg20t' 2023-03-02T19:12:37,102 Running setup.py (path:/tmp/pip-wheel-cg8ulhla/cloudreg_2e4889a6af0e4243b42d781adb2e2276/setup.py) egg_info for package cloudreg 2023-03-02T19:12:37,103 Created temporary directory: /tmp/pip-pip-egg-info-5g5g09kx 2023-03-02T19:12:37,104 Preparing metadata (setup.py): started 2023-03-02T19:12:37,106 Running command python setup.py egg_info 2023-03-02T19:12:38,578 running egg_info 2023-03-02T19:12:38,581 creating /tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info 2023-03-02T19:12:38,633 writing /tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/PKG-INFO 2023-03-02T19:12:38,637 writing dependency_links to /tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/dependency_links.txt 2023-03-02T19:12:38,642 writing requirements to /tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/requires.txt 2023-03-02T19:12:38,644 writing top-level names to /tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/top_level.txt 2023-03-02T19:12:38,647 writing manifest file '/tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:12:38,813 reading manifest file '/tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:12:38,816 adding license file 'LICENSE' 2023-03-02T19:12:38,823 writing manifest file '/tmp/pip-pip-egg-info-5g5g09kx/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:12:38,825 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:547: UserWarning: Normalizing '1.0post2' to '1.0.post2' 2023-03-02T19:12:38,826 warnings.warn(tmpl.format(**locals())) 2023-03-02T19:12:38,949 Preparing metadata (setup.py): finished with status 'done' 2023-03-02T19:12:38,962 Source in /tmp/pip-wheel-cg8ulhla/cloudreg_2e4889a6af0e4243b42d781adb2e2276 has version 1.0.post2, which satisfies requirement cloudreg==1.0.post2 from https://files.pythonhosted.org/packages/48/0a/fcc678af4c26546d9f8e0b8bdffb96c3594b80ece0e901d628b905ba1957/CloudReg-1.0.post2.tar.gz 2023-03-02T19:12:38,964 Removed cloudreg==1.0.post2 from https://files.pythonhosted.org/packages/48/0a/fcc678af4c26546d9f8e0b8bdffb96c3594b80ece0e901d628b905ba1957/CloudReg-1.0.post2.tar.gz from build tracker '/tmp/pip-build-tracker-mflrg20t' 2023-03-02T19:12:38,975 Created temporary directory: /tmp/pip-unpack-iyqmah2x 2023-03-02T19:12:38,977 Building wheels for collected packages: cloudreg 2023-03-02T19:12:38,986 Created temporary directory: /tmp/pip-wheel-499uvjpd 2023-03-02T19:12:38,987 Building wheel for cloudreg (setup.py): started 2023-03-02T19:12:38,989 Destination directory: /tmp/pip-wheel-499uvjpd 2023-03-02T19:12:38,989 Running command python setup.py bdist_wheel 2023-03-02T19:12:40,299 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:547: UserWarning: Normalizing '1.0post2' to '1.0.post2' 2023-03-02T19:12:40,300 warnings.warn(tmpl.format(**locals())) 2023-03-02T19:12:40,872 running bdist_wheel 2023-03-02T19:12:41,030 running build 2023-03-02T19:12:41,031 running build_py 2023-03-02T19:12:41,087 creating build 2023-03-02T19:12:41,088 creating build/lib 2023-03-02T19:12:41,090 creating build/lib/cloudreg 2023-03-02T19:12:41,092 copying cloudreg/__init__.py -> build/lib/cloudreg 2023-03-02T19:12:41,099 creating build/lib/cloudreg/scripts 2023-03-02T19:12:41,101 copying cloudreg/scripts/download_raw_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,105 copying cloudreg/scripts/visualization.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,109 copying cloudreg/scripts/run_colm_pipeline_ec2.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,113 copying cloudreg/scripts/__init__.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,116 copying cloudreg/scripts/run_registration_local.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,121 copying cloudreg/scripts/registration.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,125 copying cloudreg/scripts/quantify_fluorescence_by_region.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,130 copying cloudreg/scripts/download_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,134 copying cloudreg/scripts/correct_raw_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,139 copying cloudreg/scripts/scratch.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,143 copying cloudreg/scripts/transform_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,147 copying cloudreg/scripts/util.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,153 copying cloudreg/scripts/create_precomputed_volume.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,157 copying cloudreg/scripts/ingest_image_stack.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,161 copying cloudreg/scripts/downsample_iso.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,165 copying cloudreg/scripts/parastitcher.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,173 copying cloudreg/scripts/paraconverter.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,180 copying cloudreg/scripts/correct_stitched_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,184 copying cloudreg/scripts/transform_points.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,189 copying cloudreg/scripts/stitching.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,193 copying cloudreg/scripts/colm_pipeline.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,197 copying cloudreg/scripts/segment_axons.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,201 copying cloudreg/scripts/run_registration_ec2.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,205 copying cloudreg/scripts/create_precomputed_volumes.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,209 copying cloudreg/scripts/registration_accuracy.py -> build/lib/cloudreg/scripts 2023-03-02T19:12:41,213 running egg_info 2023-03-02T19:12:41,337 writing CloudReg.egg-info/PKG-INFO 2023-03-02T19:12:41,341 writing dependency_links to CloudReg.egg-info/dependency_links.txt 2023-03-02T19:12:41,345 writing requirements to CloudReg.egg-info/requires.txt 2023-03-02T19:12:41,348 writing top-level names to CloudReg.egg-info/top_level.txt 2023-03-02T19:12:41,412 reading manifest file 'CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:12:41,417 adding license file 'LICENSE' 2023-03-02T19:12:41,425 writing manifest file 'CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:12:41,493 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-02T19:12:41,494 setuptools.SetuptoolsDeprecationWarning, 2023-03-02T19:12:41,548 installing to build/bdist.linux-armv7l/wheel 2023-03-02T19:12:41,548 running install 2023-03-02T19:12:41,609 running install_lib 2023-03-02T19:12:41,666 creating build/bdist.linux-armv7l 2023-03-02T19:12:41,666 creating build/bdist.linux-armv7l/wheel 2023-03-02T19:12:41,670 creating build/bdist.linux-armv7l/wheel/cloudreg 2023-03-02T19:12:41,672 copying build/lib/cloudreg/__init__.py -> build/bdist.linux-armv7l/wheel/cloudreg 2023-03-02T19:12:41,678 creating build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,680 copying build/lib/cloudreg/scripts/download_raw_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,685 copying build/lib/cloudreg/scripts/visualization.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,690 copying build/lib/cloudreg/scripts/run_colm_pipeline_ec2.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,695 copying build/lib/cloudreg/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,699 copying build/lib/cloudreg/scripts/run_registration_local.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,704 copying build/lib/cloudreg/scripts/registration.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,708 copying build/lib/cloudreg/scripts/quantify_fluorescence_by_region.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,713 copying build/lib/cloudreg/scripts/download_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,716 copying build/lib/cloudreg/scripts/correct_raw_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,734 copying build/lib/cloudreg/scripts/scratch.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,737 copying build/lib/cloudreg/scripts/transform_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,742 copying build/lib/cloudreg/scripts/util.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,746 copying build/lib/cloudreg/scripts/create_precomputed_volume.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,750 copying build/lib/cloudreg/scripts/ingest_image_stack.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,754 copying build/lib/cloudreg/scripts/downsample_iso.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,757 copying build/lib/cloudreg/scripts/parastitcher.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,764 copying build/lib/cloudreg/scripts/paraconverter.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,770 copying build/lib/cloudreg/scripts/correct_stitched_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,773 copying build/lib/cloudreg/scripts/transform_points.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,778 copying build/lib/cloudreg/scripts/stitching.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,783 copying build/lib/cloudreg/scripts/colm_pipeline.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,788 copying build/lib/cloudreg/scripts/segment_axons.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,792 copying build/lib/cloudreg/scripts/run_registration_ec2.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,798 copying build/lib/cloudreg/scripts/create_precomputed_volumes.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,802 copying build/lib/cloudreg/scripts/registration_accuracy.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:12:41,806 running install_egg_info 2023-03-02T19:12:41,868 Copying CloudReg.egg-info to build/bdist.linux-armv7l/wheel/CloudReg-1.0.post2-py3.7.egg-info 2023-03-02T19:12:41,887 running install_scripts 2023-03-02T19:12:41,927 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-03-02T19:12:41,936 creating build/bdist.linux-armv7l/wheel/CloudReg-1.0.post2.dist-info/WHEEL 2023-03-02T19:12:41,940 creating '/tmp/pip-wheel-499uvjpd/CloudReg-1.0.post2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-02T19:12:41,947 adding 'cloudreg/__init__.py' 2023-03-02T19:12:41,951 adding 'cloudreg/scripts/__init__.py' 2023-03-02T19:12:41,954 adding 'cloudreg/scripts/colm_pipeline.py' 2023-03-02T19:12:41,958 adding 'cloudreg/scripts/correct_raw_data.py' 2023-03-02T19:12:41,962 adding 'cloudreg/scripts/correct_stitched_data.py' 2023-03-02T19:12:41,966 adding 'cloudreg/scripts/create_precomputed_volume.py' 2023-03-02T19:12:41,969 adding 'cloudreg/scripts/create_precomputed_volumes.py' 2023-03-02T19:12:41,972 adding 'cloudreg/scripts/download_data.py' 2023-03-02T19:12:41,976 adding 'cloudreg/scripts/download_raw_data.py' 2023-03-02T19:12:41,978 adding 'cloudreg/scripts/downsample_iso.py' 2023-03-02T19:12:41,981 adding 'cloudreg/scripts/ingest_image_stack.py' 2023-03-02T19:12:41,993 adding 'cloudreg/scripts/paraconverter.py' 2023-03-02T19:12:42,009 adding 'cloudreg/scripts/parastitcher.py' 2023-03-02T19:12:42,013 adding 'cloudreg/scripts/quantify_fluorescence_by_region.py' 2023-03-02T19:12:42,018 adding 'cloudreg/scripts/registration.py' 2023-03-02T19:12:42,022 adding 'cloudreg/scripts/registration_accuracy.py' 2023-03-02T19:12:42,027 adding 'cloudreg/scripts/run_colm_pipeline_ec2.py' 2023-03-02T19:12:42,031 adding 'cloudreg/scripts/run_registration_ec2.py' 2023-03-02T19:12:42,035 adding 'cloudreg/scripts/run_registration_local.py' 2023-03-02T19:12:42,037 adding 'cloudreg/scripts/scratch.py' 2023-03-02T19:12:42,041 adding 'cloudreg/scripts/segment_axons.py' 2023-03-02T19:12:42,047 adding 'cloudreg/scripts/stitching.py' 2023-03-02T19:12:42,050 adding 'cloudreg/scripts/transform_data.py' 2023-03-02T19:12:42,059 adding 'cloudreg/scripts/transform_points.py' 2023-03-02T19:12:42,065 adding 'cloudreg/scripts/util.py' 2023-03-02T19:12:42,069 adding 'cloudreg/scripts/visualization.py' 2023-03-02T19:12:42,073 adding 'CloudReg-1.0.post2.dist-info/LICENSE' 2023-03-02T19:12:42,076 adding 'CloudReg-1.0.post2.dist-info/METADATA' 2023-03-02T19:12:42,078 adding 'CloudReg-1.0.post2.dist-info/WHEEL' 2023-03-02T19:12:42,080 adding 'CloudReg-1.0.post2.dist-info/top_level.txt' 2023-03-02T19:12:42,081 adding 'CloudReg-1.0.post2.dist-info/RECORD' 2023-03-02T19:12:42,087 removing build/bdist.linux-armv7l/wheel 2023-03-02T19:12:42,247 Building wheel for cloudreg (setup.py): finished with status 'done' 2023-03-02T19:12:42,256 Created wheel for cloudreg: filename=CloudReg-1.0.post2-py3-none-any.whl size=84253 sha256=bff0e50275f0251667e7350ec6447e9c0e1db6c78e28fc792485ea8b80e007e7 2023-03-02T19:12:42,258 Stored in directory: /tmp/pip-ephem-wheel-cache-xtfog04q/wheels/dc/83/e8/559576ffdc11b1842c78929179c2fc2e22efe8866ccdd0df20 2023-03-02T19:12:42,287 Successfully built cloudreg 2023-03-02T19:12:42,302 Removed build tracker: '/tmp/pip-build-tracker-mflrg20t'