2023-03-02T19:20:55,504 Created temporary directory: /tmp/pip-ephem-wheel-cache-y4wq9_bk 2023-03-02T19:20:55,510 Created temporary directory: /tmp/pip-build-tracker-2n73fpct 2023-03-02T19:20:55,511 Initialized build tracking at /tmp/pip-build-tracker-2n73fpct 2023-03-02T19:20:55,511 Created build tracker: /tmp/pip-build-tracker-2n73fpct 2023-03-02T19:20:55,511 Entered build tracker: /tmp/pip-build-tracker-2n73fpct 2023-03-02T19:20:55,513 Created temporary directory: /tmp/pip-wheel-ayv0oz6v 2023-03-02T19:20:55,523 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-02T19:20:55,528 Created temporary directory: /tmp/pip-ephem-wheel-cache-5ibq9qqi 2023-03-02T19:20:55,582 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-02T19:20:55,590 2 location(s) to search for versions of cloudreg: 2023-03-02T19:20:55,590 * https://pypi.org/simple/cloudreg/ 2023-03-02T19:20:55,590 * https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:20:55,591 Fetching project page and analyzing links: https://pypi.org/simple/cloudreg/ 2023-03-02T19:20:55,592 Getting page https://pypi.org/simple/cloudreg/ 2023-03-02T19:20:55,596 Found index url https://pypi.org/simple 2023-03-02T19:20:55,703 Fetched page https://pypi.org/simple/cloudreg/ as application/vnd.pypi.simple.v1+json 2023-03-02T19:20:55,707 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/31/58/02e5ab5399300d976eb430a6c65a61cf31d8517af22205961e21d7191b55/CloudReg-1.0-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:20:55,708 Found link https://files.pythonhosted.org/packages/85/f5/d7bd22c878acf9471bc95dacd6f4a74ee00472126dc5ab950417ad24a9fe/CloudReg-1.0.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0 2023-03-02T19:20:55,709 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/df/a6/f1c2e870ec22e8eeaed1771232a9ca9c126772e630345bfa15ddc635e682/CloudReg-1.0.post2-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:20:55,709 Found link https://files.pythonhosted.org/packages/48/0a/fcc678af4c26546d9f8e0b8bdffb96c3594b80ece0e901d628b905ba1957/CloudReg-1.0.post2.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0.post2 2023-03-02T19:20:55,710 Skipping link: No binaries permitted for cloudreg: https://files.pythonhosted.org/packages/b6/f8/89d9ff3bdd40a07554dced1e7e3230f9ba4306a00586e9639ff2aea03910/CloudReg-1.0.1-py3-none-any.whl (from https://pypi.org/simple/cloudreg/) 2023-03-02T19:20:55,710 Found link https://files.pythonhosted.org/packages/05/ea/e3d3b273fd28c6ef1b7d9f9f98470bf4a50c01b9ab85701179f6a43a7706/CloudReg-1.0.1.tar.gz (from https://pypi.org/simple/cloudreg/), version: 1.0.1 2023-03-02T19:20:55,711 Fetching project page and analyzing links: https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:20:55,712 Getting page https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:20:55,714 Found index url https://www.piwheels.org/simple 2023-03-02T19:20:55,965 Fetched page https://www.piwheels.org/simple/cloudreg/ as text/html 2023-03-02T19:20:55,969 Skipping link: No binaries permitted for cloudreg: https://www.piwheels.org/simple/cloudreg/CloudReg-1.0.post2-py3-none-any.whl#sha256=bff0e50275f0251667e7350ec6447e9c0e1db6c78e28fc792485ea8b80e007e7 (from https://www.piwheels.org/simple/cloudreg/) 2023-03-02T19:20:55,969 Skipping link: No binaries permitted for cloudreg: https://www.piwheels.org/simple/cloudreg/CloudReg-1.0-py3-none-any.whl#sha256=964acf72bb31670d3ea9f49c8492c4fa74d7086c4e17e6eab592015b7827f4bb (from https://www.piwheels.org/simple/cloudreg/) 2023-03-02T19:20:55,970 Skipping link: not a file: https://www.piwheels.org/simple/cloudreg/ 2023-03-02T19:20:55,970 Skipping link: not a file: https://pypi.org/simple/cloudreg/ 2023-03-02T19:20:56,005 Given no hashes to check 1 links for project 'cloudreg': discarding no candidates 2023-03-02T19:20:56,032 Collecting cloudreg==1.0.1 2023-03-02T19:20:56,037 Created temporary directory: /tmp/pip-unpack-eo_jc2zo 2023-03-02T19:20:56,267 Downloading CloudReg-1.0.1.tar.gz (67 kB) 2023-03-02T19:20:56,500 Added cloudreg==1.0.1 from https://files.pythonhosted.org/packages/05/ea/e3d3b273fd28c6ef1b7d9f9f98470bf4a50c01b9ab85701179f6a43a7706/CloudReg-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-2n73fpct' 2023-03-02T19:20:56,503 Running setup.py (path:/tmp/pip-wheel-ayv0oz6v/cloudreg_7834df8324414e8daf001306c14a053e/setup.py) egg_info for package cloudreg 2023-03-02T19:20:56,504 Created temporary directory: /tmp/pip-pip-egg-info-_lwmzk5f 2023-03-02T19:20:56,505 Preparing metadata (setup.py): started 2023-03-02T19:20:56,507 Running command python setup.py egg_info 2023-03-02T19:20:57,961 running egg_info 2023-03-02T19:20:57,963 creating /tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info 2023-03-02T19:20:58,015 writing /tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/PKG-INFO 2023-03-02T19:20:58,019 writing dependency_links to /tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/dependency_links.txt 2023-03-02T19:20:58,024 writing requirements to /tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/requires.txt 2023-03-02T19:20:58,026 writing top-level names to /tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/top_level.txt 2023-03-02T19:20:58,029 writing manifest file '/tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:20:58,194 reading manifest file '/tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:20:58,197 adding license file 'LICENSE' 2023-03-02T19:20:58,204 writing manifest file '/tmp/pip-pip-egg-info-_lwmzk5f/CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:20:58,321 Preparing metadata (setup.py): finished with status 'done' 2023-03-02T19:20:58,335 Source in /tmp/pip-wheel-ayv0oz6v/cloudreg_7834df8324414e8daf001306c14a053e has version 1.0.1, which satisfies requirement cloudreg==1.0.1 from https://files.pythonhosted.org/packages/05/ea/e3d3b273fd28c6ef1b7d9f9f98470bf4a50c01b9ab85701179f6a43a7706/CloudReg-1.0.1.tar.gz 2023-03-02T19:20:58,336 Removed cloudreg==1.0.1 from https://files.pythonhosted.org/packages/05/ea/e3d3b273fd28c6ef1b7d9f9f98470bf4a50c01b9ab85701179f6a43a7706/CloudReg-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-2n73fpct' 2023-03-02T19:20:58,348 Created temporary directory: /tmp/pip-unpack-04g2bv37 2023-03-02T19:20:58,349 Building wheels for collected packages: cloudreg 2023-03-02T19:20:58,358 Created temporary directory: /tmp/pip-wheel-f16fuhxk 2023-03-02T19:20:58,359 Building wheel for cloudreg (setup.py): started 2023-03-02T19:20:58,361 Destination directory: /tmp/pip-wheel-f16fuhxk 2023-03-02T19:20:58,361 Running command python setup.py bdist_wheel 2023-03-02T19:21:00,244 running bdist_wheel 2023-03-02T19:21:00,403 running build 2023-03-02T19:21:00,403 running build_py 2023-03-02T19:21:00,461 creating build 2023-03-02T19:21:00,462 creating build/lib 2023-03-02T19:21:00,464 creating build/lib/cloudreg 2023-03-02T19:21:00,466 copying cloudreg/__init__.py -> build/lib/cloudreg 2023-03-02T19:21:00,473 creating build/lib/cloudreg/scripts 2023-03-02T19:21:00,475 copying cloudreg/scripts/colm_pipeline.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,479 copying cloudreg/scripts/parastitcher.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,486 copying cloudreg/scripts/download_raw_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,490 copying cloudreg/scripts/util.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,495 copying cloudreg/scripts/run_registration_local.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,499 copying cloudreg/scripts/downsample_iso.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,502 copying cloudreg/scripts/create_precomputed_volumes.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,506 copying cloudreg/scripts/run_registration_ec2.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,510 copying cloudreg/scripts/stitching.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,515 copying cloudreg/scripts/correct_raw_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,519 copying cloudreg/scripts/ingest_image_stack.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,522 copying cloudreg/scripts/transform_points.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,526 copying cloudreg/scripts/quantify_fluorescence_by_region.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,531 copying cloudreg/scripts/visualization.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,535 copying cloudreg/scripts/registration_accuracy.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,539 copying cloudreg/scripts/paraconverter.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,544 copying cloudreg/scripts/__init__.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,547 copying cloudreg/scripts/transform_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,551 copying cloudreg/scripts/create_precomputed_volume.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,555 copying cloudreg/scripts/run_colm_pipeline_ec2.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,560 copying cloudreg/scripts/segment_axons.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,564 copying cloudreg/scripts/download_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,567 copying cloudreg/scripts/correct_stitched_data.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,571 copying cloudreg/scripts/scratch.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,574 copying cloudreg/scripts/registration.py -> build/lib/cloudreg/scripts 2023-03-02T19:21:00,578 running egg_info 2023-03-02T19:21:00,702 writing CloudReg.egg-info/PKG-INFO 2023-03-02T19:21:00,706 writing dependency_links to CloudReg.egg-info/dependency_links.txt 2023-03-02T19:21:00,710 writing requirements to CloudReg.egg-info/requires.txt 2023-03-02T19:21:00,713 writing top-level names to CloudReg.egg-info/top_level.txt 2023-03-02T19:21:00,773 reading manifest file 'CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:21:00,779 adding license file 'LICENSE' 2023-03-02T19:21:00,787 writing manifest file 'CloudReg.egg-info/SOURCES.txt' 2023-03-02T19:21:00,855 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-02T19:21:00,856 setuptools.SetuptoolsDeprecationWarning, 2023-03-02T19:21:00,910 installing to build/bdist.linux-armv7l/wheel 2023-03-02T19:21:00,910 running install 2023-03-02T19:21:00,972 running install_lib 2023-03-02T19:21:01,027 creating build/bdist.linux-armv7l 2023-03-02T19:21:01,028 creating build/bdist.linux-armv7l/wheel 2023-03-02T19:21:01,031 creating build/bdist.linux-armv7l/wheel/cloudreg 2023-03-02T19:21:01,035 creating build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,037 copying build/lib/cloudreg/scripts/colm_pipeline.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,042 copying build/lib/cloudreg/scripts/parastitcher.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,049 copying build/lib/cloudreg/scripts/download_raw_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,053 copying build/lib/cloudreg/scripts/util.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,059 copying build/lib/cloudreg/scripts/run_registration_local.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,064 copying build/lib/cloudreg/scripts/downsample_iso.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,068 copying build/lib/cloudreg/scripts/create_precomputed_volumes.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,073 copying build/lib/cloudreg/scripts/run_registration_ec2.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,078 copying build/lib/cloudreg/scripts/stitching.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,083 copying build/lib/cloudreg/scripts/correct_raw_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,089 copying build/lib/cloudreg/scripts/ingest_image_stack.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,094 copying build/lib/cloudreg/scripts/transform_points.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,099 copying build/lib/cloudreg/scripts/quantify_fluorescence_by_region.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,104 copying build/lib/cloudreg/scripts/visualization.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,109 copying build/lib/cloudreg/scripts/registration_accuracy.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,114 copying build/lib/cloudreg/scripts/paraconverter.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,120 copying build/lib/cloudreg/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,124 copying build/lib/cloudreg/scripts/transform_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,129 copying build/lib/cloudreg/scripts/create_precomputed_volume.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,134 copying build/lib/cloudreg/scripts/run_colm_pipeline_ec2.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,138 copying build/lib/cloudreg/scripts/segment_axons.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,143 copying build/lib/cloudreg/scripts/download_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,147 copying build/lib/cloudreg/scripts/correct_stitched_data.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,153 copying build/lib/cloudreg/scripts/scratch.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,157 copying build/lib/cloudreg/scripts/registration.py -> build/bdist.linux-armv7l/wheel/cloudreg/scripts 2023-03-02T19:21:01,162 copying build/lib/cloudreg/__init__.py -> build/bdist.linux-armv7l/wheel/cloudreg 2023-03-02T19:21:01,165 running install_egg_info 2023-03-02T19:21:01,230 Copying CloudReg.egg-info to build/bdist.linux-armv7l/wheel/CloudReg-1.0.1-py3.7.egg-info 2023-03-02T19:21:01,249 running install_scripts 2023-03-02T19:21:01,287 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-03-02T19:21:01,297 creating build/bdist.linux-armv7l/wheel/CloudReg-1.0.1.dist-info/WHEEL 2023-03-02T19:21:01,301 creating '/tmp/pip-wheel-f16fuhxk/CloudReg-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-02T19:21:01,308 adding 'cloudreg/__init__.py' 2023-03-02T19:21:01,313 adding 'cloudreg/scripts/__init__.py' 2023-03-02T19:21:01,316 adding 'cloudreg/scripts/colm_pipeline.py' 2023-03-02T19:21:01,320 adding 'cloudreg/scripts/correct_raw_data.py' 2023-03-02T19:21:01,323 adding 'cloudreg/scripts/correct_stitched_data.py' 2023-03-02T19:21:01,327 adding 'cloudreg/scripts/create_precomputed_volume.py' 2023-03-02T19:21:01,331 adding 'cloudreg/scripts/create_precomputed_volumes.py' 2023-03-02T19:21:01,334 adding 'cloudreg/scripts/download_data.py' 2023-03-02T19:21:01,337 adding 'cloudreg/scripts/download_raw_data.py' 2023-03-02T19:21:01,340 adding 'cloudreg/scripts/downsample_iso.py' 2023-03-02T19:21:01,343 adding 'cloudreg/scripts/ingest_image_stack.py' 2023-03-02T19:21:01,354 adding 'cloudreg/scripts/paraconverter.py' 2023-03-02T19:21:01,371 adding 'cloudreg/scripts/parastitcher.py' 2023-03-02T19:21:01,375 adding 'cloudreg/scripts/quantify_fluorescence_by_region.py' 2023-03-02T19:21:01,380 adding 'cloudreg/scripts/registration.py' 2023-03-02T19:21:01,384 adding 'cloudreg/scripts/registration_accuracy.py' 2023-03-02T19:21:01,391 adding 'cloudreg/scripts/run_colm_pipeline_ec2.py' 2023-03-02T19:21:01,395 adding 'cloudreg/scripts/run_registration_ec2.py' 2023-03-02T19:21:01,399 adding 'cloudreg/scripts/run_registration_local.py' 2023-03-02T19:21:01,402 adding 'cloudreg/scripts/scratch.py' 2023-03-02T19:21:01,406 adding 'cloudreg/scripts/segment_axons.py' 2023-03-02T19:21:01,411 adding 'cloudreg/scripts/stitching.py' 2023-03-02T19:21:01,415 adding 'cloudreg/scripts/transform_data.py' 2023-03-02T19:21:01,420 adding 'cloudreg/scripts/transform_points.py' 2023-03-02T19:21:01,425 adding 'cloudreg/scripts/util.py' 2023-03-02T19:21:01,429 adding 'cloudreg/scripts/visualization.py' 2023-03-02T19:21:01,434 adding 'CloudReg-1.0.1.dist-info/LICENSE' 2023-03-02T19:21:01,437 adding 'CloudReg-1.0.1.dist-info/METADATA' 2023-03-02T19:21:01,439 adding 'CloudReg-1.0.1.dist-info/WHEEL' 2023-03-02T19:21:01,441 adding 'CloudReg-1.0.1.dist-info/top_level.txt' 2023-03-02T19:21:01,442 adding 'CloudReg-1.0.1.dist-info/RECORD' 2023-03-02T19:21:01,451 removing build/bdist.linux-armv7l/wheel 2023-03-02T19:21:01,612 Building wheel for cloudreg (setup.py): finished with status 'done' 2023-03-02T19:21:01,621 Created wheel for cloudreg: filename=CloudReg-1.0.1-py3-none-any.whl size=84198 sha256=27d026503703dad958a0c91ee8097b63ca00bccaac2f1a0c4b3095a4a3821ff6 2023-03-02T19:21:01,623 Stored in directory: /tmp/pip-ephem-wheel-cache-5ibq9qqi/wheels/89/85/04/0a0c218832873ee22610b67bdaf6b2d46606c535bbc655144d 2023-03-02T19:21:01,651 Successfully built cloudreg 2023-03-02T19:21:01,663 Removed build tracker: '/tmp/pip-build-tracker-2n73fpct'