2023-03-03T08:39:16,891 Created temporary directory: /tmp/pip-ephem-wheel-cache-en5p72zv 2023-03-03T08:39:16,896 Created temporary directory: /tmp/pip-build-tracker-ydx2tfyt 2023-03-03T08:39:16,897 Initialized build tracking at /tmp/pip-build-tracker-ydx2tfyt 2023-03-03T08:39:16,898 Created build tracker: /tmp/pip-build-tracker-ydx2tfyt 2023-03-03T08:39:16,898 Entered build tracker: /tmp/pip-build-tracker-ydx2tfyt 2023-03-03T08:39:16,899 Created temporary directory: /tmp/pip-wheel-71z4crxz 2023-03-03T08:39:16,910 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-03T08:39:16,915 Created temporary directory: /tmp/pip-ephem-wheel-cache-616k65la 2023-03-03T08:39:16,976 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-03T08:39:16,983 2 location(s) to search for versions of graph-read-simulator: 2023-03-03T08:39:16,983 * https://pypi.org/simple/graph-read-simulator/ 2023-03-03T08:39:16,983 * https://www.piwheels.org/simple/graph-read-simulator/ 2023-03-03T08:39:16,984 Fetching project page and analyzing links: https://pypi.org/simple/graph-read-simulator/ 2023-03-03T08:39:16,986 Getting page https://pypi.org/simple/graph-read-simulator/ 2023-03-03T08:39:16,989 Found index url https://pypi.org/simple 2023-03-03T08:39:17,218 Fetched page https://pypi.org/simple/graph-read-simulator/ as application/vnd.pypi.simple.v1+json 2023-03-03T08:39:17,227 Found link https://files.pythonhosted.org/packages/ee/45/3411015d4344a474bc49d934f3f0c43bfe33f0c4e79c7ce54922fbf2b52f/graph_read_simulator-0.0.2.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.2 2023-03-03T08:39:17,228 Found link https://files.pythonhosted.org/packages/87/39/e8c9caab43a81e287267cf45d904ad9a8d0725f6ff6e38d67be3dedcf7bd/graph_read_simulator-0.0.3.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.3 2023-03-03T08:39:17,229 Found link https://files.pythonhosted.org/packages/d6/7b/7b51cf0f2b7bbc4283a349a5213cc0e1c3bec1eced834facea6cb0173e4c/graph_read_simulator-0.0.5.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.5 2023-03-03T08:39:17,229 Found link https://files.pythonhosted.org/packages/4c/6c/f19b1f978fae335bec89702237186d02339c4764a0c0de5fe855012880bd/graph_read_simulator-0.0.6.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.6 2023-03-03T08:39:17,230 Found link https://files.pythonhosted.org/packages/f5/b8/4c4b0e4d907ff2c393898d0c032fe37532ae368792004286ed78f02df382/graph_read_simulator-0.0.7.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.7 2023-03-03T08:39:17,231 Found link https://files.pythonhosted.org/packages/5b/49/fe81fdf5aaa195747d22f932a406d1a7f6bcaba858da71f9a3c4915c46f6/graph_read_simulator-0.0.8.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.8 2023-03-03T08:39:17,231 Found link https://files.pythonhosted.org/packages/64/c6/416740281ee9b07ab7bf304fd865dcf2c2ac6568b8b02363e560a34f1888/graph_read_simulator-0.0.9.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.9 2023-03-03T08:39:17,232 Found link https://files.pythonhosted.org/packages/c4/28/c0eadd45ba25d95e222d11325ce25a392e7eebe0edacce59f5c685544f03/graph_read_simulator-0.0.10.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.10 2023-03-03T08:39:17,233 Found link https://files.pythonhosted.org/packages/96/bf/d532a8b547b54d35ea3fbcac19e4c6f2488c70b505a2f6c78b3eb7a82d26/graph_read_simulator-0.0.11.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.11 2023-03-03T08:39:17,233 Found link https://files.pythonhosted.org/packages/3b/77/0dfd7d4ef1b492963a4e55e46ebfb0363e9dd01c53a1d3f13655249017a5/graph_read_simulator-0.0.12.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.12 2023-03-03T08:39:17,234 Found link https://files.pythonhosted.org/packages/d3/e6/37d64976b4fd62a7c088eac6fba1adf11158038b0edade192423db47a0f6/graph_read_simulator-0.0.13.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.13 2023-03-03T08:39:17,235 Found link https://files.pythonhosted.org/packages/d1/7f/ff2b50f5dd08f3f73777d1103305b2df3b88501eaa93683686ced88ef383/graph_read_simulator-0.0.14.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.14 2023-03-03T08:39:17,236 Found link https://files.pythonhosted.org/packages/69/c8/e6e24bb885077c923bcb2b47e7aa1ee01ccbc55eed0dec68c6d3935365f8/graph_read_simulator-0.0.15.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.15 2023-03-03T08:39:17,236 Found link https://files.pythonhosted.org/packages/31/a5/6a68a3a14238f88bcdb5d7a3767ae5fef15da4839925ba1446db121d2d57/graph_read_simulator-0.0.16.tar.gz (from https://pypi.org/simple/graph-read-simulator/), version: 0.0.16 2023-03-03T08:39:17,237 Fetching project page and analyzing links: https://www.piwheels.org/simple/graph-read-simulator/ 2023-03-03T08:39:17,238 Getting page https://www.piwheels.org/simple/graph-read-simulator/ 2023-03-03T08:39:17,240 Found index url https://www.piwheels.org/simple 2023-03-03T08:39:17,468 Fetched page https://www.piwheels.org/simple/graph-read-simulator/ as text/html 2023-03-03T08:39:17,479 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.15-py3-none-any.whl#sha256=03eb5b8abe18fc95129c9108360a2e633ec976e62180f22a0fb304439fd8653a (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,480 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.14-py3-none-any.whl#sha256=a7703524a1ae489a1b5c90e7d7b9acf00e27e73b9e56e013e2747bb5760779ea (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,481 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.13-py3-none-any.whl#sha256=d5d53349d47cd9a0413b22d2a9a2638105befbb7e3452dccde04ddc7b3b9ec3c (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,481 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.12-py3-none-any.whl#sha256=3cacd27514d0d2fa5634bf86139f4298951341380459a494c62ed6a8f8b83c9c (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,482 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.11-py3-none-any.whl#sha256=7a486c6cd2e844a96eb26f92e941f0ab3457759132ab19af6f7279d314c122bb (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,482 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.10-py3-none-any.whl#sha256=1e3e970f09bbc87373ed05dcd5584e767ed083cdf9748152ec88ceab751461d2 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,483 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.9-py3-none-any.whl#sha256=e4d525837e712c0d5e7e9f2d7c7e6dc945d4622787f7159ba91245eb27ef08d3 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,483 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.8-py3-none-any.whl#sha256=fab92541454f6f5a9755edde92026c2b370580585668f786c7ac3f5169336f7d (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,484 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.7-py3-none-any.whl#sha256=e93952bea9b246f76f8eaf1c4520df07309a7d6ed7ac9a2e075908c684a509d6 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,484 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.6-py3-none-any.whl#sha256=57e3085d0070a595bcf8334a81d1458a2349349d10a4b7db4626dd7700bdc7fc (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,485 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.5-py3-none-any.whl#sha256=9dd76f7a7de430ce5ed13cb68843f7ddba496a4b3f1bf46021c25c35b626e225 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,485 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.3-py3-none-any.whl#sha256=5eeb0aa031f32e910fa0acba4fd8565739277d28c902701998642178a8c69486 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,486 Skipping link: No binaries permitted for graph-read-simulator: https://www.piwheels.org/simple/graph-read-simulator/graph_read_simulator-0.0.2-py3-none-any.whl#sha256=67f66f7eb738925c19b19bb24244f62fd22fdd4a5495c3b0b303708593e2e6f1 (from https://www.piwheels.org/simple/graph-read-simulator/) 2023-03-03T08:39:17,487 Skipping link: not a file: https://www.piwheels.org/simple/graph-read-simulator/ 2023-03-03T08:39:17,487 Skipping link: not a file: https://pypi.org/simple/graph-read-simulator/ 2023-03-03T08:39:17,524 Given no hashes to check 1 links for project 'graph-read-simulator': discarding no candidates 2023-03-03T08:39:17,555 Collecting graph-read-simulator==0.0.16 2023-03-03T08:39:17,559 Created temporary directory: /tmp/pip-unpack-3n8xq6pp 2023-03-03T08:39:17,801 Downloading graph_read_simulator-0.0.16.tar.gz (14 kB) 2023-03-03T08:39:17,910 Added graph-read-simulator==0.0.16 from https://files.pythonhosted.org/packages/31/a5/6a68a3a14238f88bcdb5d7a3767ae5fef15da4839925ba1446db121d2d57/graph_read_simulator-0.0.16.tar.gz to build tracker '/tmp/pip-build-tracker-ydx2tfyt' 2023-03-03T08:39:17,913 Running setup.py (path:/tmp/pip-wheel-71z4crxz/graph-read-simulator_0a4abd311fe34553941878d840737273/setup.py) egg_info for package graph-read-simulator 2023-03-03T08:39:17,914 Created temporary directory: /tmp/pip-pip-egg-info-tzk9ojjv 2023-03-03T08:39:17,915 Preparing metadata (setup.py): started 2023-03-03T08:39:17,917 Running command python setup.py egg_info 2023-03-03T08:39:19,348 running egg_info 2023-03-03T08:39:19,353 creating /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info 2023-03-03T08:39:19,406 writing /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/PKG-INFO 2023-03-03T08:39:19,412 writing dependency_links to /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/dependency_links.txt 2023-03-03T08:39:19,416 writing entry points to /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/entry_points.txt 2023-03-03T08:39:19,420 writing requirements to /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/requires.txt 2023-03-03T08:39:19,423 writing top-level names to /tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/top_level.txt 2023-03-03T08:39:19,426 writing manifest file '/tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/SOURCES.txt' 2023-03-03T08:39:19,592 reading manifest file '/tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/SOURCES.txt' 2023-03-03T08:39:19,601 writing manifest file '/tmp/pip-pip-egg-info-tzk9ojjv/graph_read_simulator.egg-info/SOURCES.txt' 2023-03-03T08:39:19,720 Preparing metadata (setup.py): finished with status 'done' 2023-03-03T08:39:19,732 Source in /tmp/pip-wheel-71z4crxz/graph-read-simulator_0a4abd311fe34553941878d840737273 has version 0.0.16, which satisfies requirement graph-read-simulator==0.0.16 from https://files.pythonhosted.org/packages/31/a5/6a68a3a14238f88bcdb5d7a3767ae5fef15da4839925ba1446db121d2d57/graph_read_simulator-0.0.16.tar.gz 2023-03-03T08:39:19,734 Removed graph-read-simulator==0.0.16 from https://files.pythonhosted.org/packages/31/a5/6a68a3a14238f88bcdb5d7a3767ae5fef15da4839925ba1446db121d2d57/graph_read_simulator-0.0.16.tar.gz from build tracker '/tmp/pip-build-tracker-ydx2tfyt' 2023-03-03T08:39:19,744 Created temporary directory: /tmp/pip-unpack-l2_olu85 2023-03-03T08:39:19,746 Building wheels for collected packages: graph-read-simulator 2023-03-03T08:39:19,755 Created temporary directory: /tmp/pip-wheel-clssditv 2023-03-03T08:39:19,756 Building wheel for graph-read-simulator (setup.py): started 2023-03-03T08:39:19,758 Destination directory: /tmp/pip-wheel-clssditv 2023-03-03T08:39:19,759 Running command python setup.py bdist_wheel 2023-03-03T08:39:21,634 running bdist_wheel 2023-03-03T08:39:22,325 running build 2023-03-03T08:39:22,326 running build_py 2023-03-03T08:39:22,399 creating build 2023-03-03T08:39:22,400 creating build/lib 2023-03-03T08:39:22,401 creating build/lib/graph_read_simulator 2023-03-03T08:39:22,403 copying graph_read_simulator/diploid_reference_builder.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,408 copying graph_read_simulator/util.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,412 copying graph_read_simulator/simulation.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,417 copying graph_read_simulator/vcf_simulation.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,421 copying graph_read_simulator/command_line_interface.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,425 copying graph_read_simulator/id_assignment.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,429 copying graph_read_simulator/chip_seq.py -> build/lib/graph_read_simulator 2023-03-03T08:39:22,496 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-03T08:39:22,497 setuptools.SetuptoolsDeprecationWarning, 2023-03-03T08:39:22,551 installing to build/bdist.linux-armv7l/wheel 2023-03-03T08:39:22,552 running install 2023-03-03T08:39:22,612 running install_lib 2023-03-03T08:39:22,669 creating build/bdist.linux-armv7l 2023-03-03T08:39:22,669 creating build/bdist.linux-armv7l/wheel 2023-03-03T08:39:22,673 creating build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,675 copying build/lib/graph_read_simulator/diploid_reference_builder.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,680 copying build/lib/graph_read_simulator/util.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,684 copying build/lib/graph_read_simulator/simulation.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,689 copying build/lib/graph_read_simulator/vcf_simulation.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,693 copying build/lib/graph_read_simulator/command_line_interface.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,698 copying build/lib/graph_read_simulator/id_assignment.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,701 copying build/lib/graph_read_simulator/chip_seq.py -> build/bdist.linux-armv7l/wheel/graph_read_simulator 2023-03-03T08:39:22,705 running install_egg_info 2023-03-03T08:39:22,845 running egg_info 2023-03-03T08:39:22,896 writing graph_read_simulator.egg-info/PKG-INFO 2023-03-03T08:39:22,900 writing dependency_links to graph_read_simulator.egg-info/dependency_links.txt 2023-03-03T08:39:22,904 writing entry points to graph_read_simulator.egg-info/entry_points.txt 2023-03-03T08:39:22,906 writing requirements to graph_read_simulator.egg-info/requires.txt 2023-03-03T08:39:22,909 writing top-level names to graph_read_simulator.egg-info/top_level.txt 2023-03-03T08:39:22,967 reading manifest file 'graph_read_simulator.egg-info/SOURCES.txt' 2023-03-03T08:39:22,977 writing manifest file 'graph_read_simulator.egg-info/SOURCES.txt' 2023-03-03T08:39:22,980 Copying graph_read_simulator.egg-info to build/bdist.linux-armv7l/wheel/graph_read_simulator-0.0.16-py3.7.egg-info 2023-03-03T08:39:23,006 running install_scripts 2023-03-03T08:39:23,035 creating build/bdist.linux-armv7l/wheel/graph_read_simulator-0.0.16.dist-info/WHEEL 2023-03-03T08:39:23,040 creating '/tmp/pip-wheel-clssditv/graph_read_simulator-0.0.16-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-03T08:39:23,046 adding 'graph_read_simulator/chip_seq.py' 2023-03-03T08:39:23,051 adding 'graph_read_simulator/command_line_interface.py' 2023-03-03T08:39:23,055 adding 'graph_read_simulator/diploid_reference_builder.py' 2023-03-03T08:39:23,057 adding 'graph_read_simulator/id_assignment.py' 2023-03-03T08:39:23,061 adding 'graph_read_simulator/simulation.py' 2023-03-03T08:39:23,064 adding 'graph_read_simulator/util.py' 2023-03-03T08:39:23,068 adding 'graph_read_simulator/vcf_simulation.py' 2023-03-03T08:39:23,073 adding 'graph_read_simulator-0.0.16.dist-info/METADATA' 2023-03-03T08:39:23,074 adding 'graph_read_simulator-0.0.16.dist-info/WHEEL' 2023-03-03T08:39:23,076 adding 'graph_read_simulator-0.0.16.dist-info/entry_points.txt' 2023-03-03T08:39:23,079 adding 'graph_read_simulator-0.0.16.dist-info/top_level.txt' 2023-03-03T08:39:23,081 adding 'graph_read_simulator-0.0.16.dist-info/RECORD' 2023-03-03T08:39:23,083 removing build/bdist.linux-armv7l/wheel 2023-03-03T08:39:23,257 Building wheel for graph-read-simulator (setup.py): finished with status 'done' 2023-03-03T08:39:23,264 Created wheel for graph-read-simulator: filename=graph_read_simulator-0.0.16-py3-none-any.whl size=14962 sha256=4aed8b8b580e1059f0948c16373f0d57b47cc1f379b98cbc597ca3d965e7bf05 2023-03-03T08:39:23,266 Stored in directory: /tmp/pip-ephem-wheel-cache-616k65la/wheels/b3/b2/6e/0adf64f14777846d4159121dc4b8727748e9c54dade765af24 2023-03-03T08:39:23,291 Successfully built graph-read-simulator 2023-03-03T08:39:23,299 Removed build tracker: '/tmp/pip-build-tracker-ydx2tfyt'