2023-03-05T08:33:30,801 Created temporary directory: /tmp/pip-ephem-wheel-cache-588y_29f
2023-03-05T08:33:30,804 Created temporary directory: /tmp/pip-build-tracker-pxss10xn
2023-03-05T08:33:30,804 Initialized build tracking at /tmp/pip-build-tracker-pxss10xn
2023-03-05T08:33:30,804 Created build tracker: /tmp/pip-build-tracker-pxss10xn
2023-03-05T08:33:30,804 Entered build tracker: /tmp/pip-build-tracker-pxss10xn
2023-03-05T08:33:30,805 Created temporary directory: /tmp/pip-wheel-4qp_pt87
2023-03-05T08:33:30,810 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-05T08:33:30,812 Created temporary directory: /tmp/pip-ephem-wheel-cache-xdedd2g1
2023-03-05T08:33:30,841 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-05T08:33:30,844 2 location(s) to search for versions of funid:
2023-03-05T08:33:30,844 * https://pypi.org/simple/funid/
2023-03-05T08:33:30,844 * https://www.piwheels.org/simple/funid/
2023-03-05T08:33:30,845 Fetching project page and analyzing links: https://pypi.org/simple/funid/
2023-03-05T08:33:30,845 Getting page https://pypi.org/simple/funid/
2023-03-05T08:33:30,846 Found index url https://pypi.org/simple
2023-03-05T08:33:30,898 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json
2023-03-05T08:33:30,902   Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0
2023-03-05T08:33:30,902   Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8)
2023-03-05T08:33:30,903   Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2
2023-03-05T08:33:30,903   Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:30,904   Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1
2023-03-05T08:33:30,904   Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:30,905   Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0
2023-03-05T08:33:30,905   Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:30,905   Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1
2023-03-05T08:33:30,906   Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:30,906   Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4
2023-03-05T08:33:30,907 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/
2023-03-05T08:33:30,907 Getting page https://www.piwheels.org/simple/funid/
2023-03-05T08:33:30,908 Found index url https://www.piwheels.org/simple
2023-03-05T08:33:31,077 Fetched page https://www.piwheels.org/simple/funid/ as text/html
2023-03-05T08:33:31,081   Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:31,081   Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:31,082   Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8)
2023-03-05T08:33:31,082   Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8)
2023-03-05T08:33:31,082   Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8)
2023-03-05T08:33:31,083 Skipping link: not a file: https://www.piwheels.org/simple/funid/
2023-03-05T08:33:31,083 Skipping link: not a file: https://pypi.org/simple/funid/
2023-03-05T08:33:31,111 Given no hashes to check 1 links for project 'funid': discarding no candidates
2023-03-05T08:33:31,136 Collecting funid==0.3.4
2023-03-05T08:33:31,138   Created temporary directory: /tmp/pip-unpack-steq5s4p
2023-03-05T08:33:31,343   Downloading FunID-0.3.4.tar.gz (65.2 MB)
2023-03-05T08:33:52,877   Added funid==0.3.4 from https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz to build tracker '/tmp/pip-build-tracker-pxss10xn'
2023-03-05T08:33:52,878   Running setup.py (path:/tmp/pip-wheel-4qp_pt87/funid_a61433cadfd44e6f9c9cb4e4b5dcccdd/setup.py) egg_info for package funid
2023-03-05T08:33:52,879   Created temporary directory: /tmp/pip-pip-egg-info-odti8v11
2023-03-05T08:33:52,880   Preparing metadata (setup.py): started
2023-03-05T08:33:52,881   Running command python setup.py egg_info
2023-03-05T08:33:53,488   {'name': 'FunID', 'version': '0.3.4', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<=3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.7.1', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'}
2023-03-05T08:33:53,489   running egg_info
2023-03-05T08:33:53,489   creating /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info
2023-03-05T08:33:53,543   writing /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/PKG-INFO
2023-03-05T08:33:53,546   writing dependency_links to /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/dependency_links.txt
2023-03-05T08:33:53,548   writing entry points to /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/entry_points.txt
2023-03-05T08:33:53,549   writing requirements to /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/requires.txt
2023-03-05T08:33:53,551   writing top-level names to /tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/top_level.txt
2023-03-05T08:33:53,552   writing manifest file '/tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/SOURCES.txt'
2023-03-05T08:33:53,633   reading manifest file '/tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/SOURCES.txt'
2023-03-05T08:33:53,635   adding license file 'LICENSE'
2023-03-05T08:33:53,638   writing manifest file '/tmp/pip-pip-egg-info-odti8v11/FunID.egg-info/SOURCES.txt'
2023-03-05T08:33:53,697   Preparing metadata (setup.py): finished with status 'done'
2023-03-05T08:33:53,703   Source in /tmp/pip-wheel-4qp_pt87/funid_a61433cadfd44e6f9c9cb4e4b5dcccdd has version 0.3.4, which satisfies requirement funid==0.3.4 from https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz
2023-03-05T08:33:53,704   Removed funid==0.3.4 from https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz from build tracker '/tmp/pip-build-tracker-pxss10xn'
2023-03-05T08:33:53,711 Created temporary directory: /tmp/pip-unpack-_nth08kh
2023-03-05T08:33:53,712 Building wheels for collected packages: funid
2023-03-05T08:33:53,716   Created temporary directory: /tmp/pip-wheel-a4xii3xw
2023-03-05T08:33:53,717   Building wheel for funid (setup.py): started
2023-03-05T08:33:53,718   Destination directory: /tmp/pip-wheel-a4xii3xw
2023-03-05T08:33:53,718   Running command python setup.py bdist_wheel
2023-03-05T08:33:54,163   {'name': 'FunID', 'version': '0.3.4', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<=3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.7.1', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'}
2023-03-05T08:33:54,559   running bdist_wheel
2023-03-05T08:33:54,831   running build
2023-03-05T08:33:54,832   running build_py
2023-03-05T08:33:54,856   creating build
2023-03-05T08:33:54,857   creating build/lib
2023-03-05T08:33:54,858   creating build/lib/funid
2023-03-05T08:33:54,859   copying funid/__init__.py -> build/lib/funid
2023-03-05T08:33:54,861   copying funid/FunID_GUI.py -> build/lib/funid
2023-03-05T08:33:54,864   copying funid/main.py -> build/lib/funid
2023-03-05T08:33:54,867   creating build/lib/funid/src
2023-03-05T08:33:54,868   copying funid/src/opt_generator.py -> build/lib/funid/src
2023-03-05T08:33:54,871   copying funid/src/command.py -> build/lib/funid/src
2023-03-05T08:33:54,874   copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src
2023-03-05T08:33:54,876   copying funid/src/patch.py -> build/lib/funid/src
2023-03-05T08:33:54,879   copying funid/src/__init__.py -> build/lib/funid/src
2023-03-05T08:33:54,880   copying funid/src/validation.py -> build/lib/funid/src
2023-03-05T08:33:54,882   copying funid/src/logics.py -> build/lib/funid/src
2023-03-05T08:33:54,884   copying funid/src/logger.py -> build/lib/funid/src
2023-03-05T08:33:54,886   copying funid/src/dataset.py -> build/lib/funid/src
2023-03-05T08:33:54,888   copying funid/src/reporter.py -> build/lib/funid/src
2023-03-05T08:33:54,892   copying funid/src/tree.py -> build/lib/funid/src
2023-03-05T08:33:54,894   copying funid/src/save.py -> build/lib/funid/src
2023-03-05T08:33:54,896   copying funid/src/tool.py -> build/lib/funid/src
2023-03-05T08:33:54,899   copying funid/src/modeltest.py -> build/lib/funid/src
2023-03-05T08:33:54,902   copying funid/src/trim.py -> build/lib/funid/src
2023-03-05T08:33:54,904   copying funid/src/validate_option.py -> build/lib/funid/src
2023-03-05T08:33:54,907   copying funid/src/search.py -> build/lib/funid/src
2023-03-05T08:33:54,910   copying funid/src/ncbi.py -> build/lib/funid/src
2023-03-05T08:33:54,912   copying funid/src/ext.py -> build/lib/funid/src
2023-03-05T08:33:54,915   copying funid/src/manage_input.py -> build/lib/funid/src
2023-03-05T08:33:54,918   copying funid/src/align.py -> build/lib/funid/src
2023-03-05T08:33:54,920   copying funid/src/tree_interpretation.py -> build/lib/funid/src
2023-03-05T08:33:54,923   copying funid/src/hasher.py -> build/lib/funid/src
2023-03-05T08:33:54,925   copying funid/src/multigene.py -> build/lib/funid/src
2023-03-05T08:33:54,928   copying funid/src/cluster.py -> build/lib/funid/src
2023-03-05T08:33:54,931   copying funid/src/initialize.py -> build/lib/funid/src
2023-03-05T08:33:54,934   creating build/lib/funid/data
2023-03-05T08:33:54,935   copying funid/data/__init__.py -> build/lib/funid/data
2023-03-05T08:33:54,937   running egg_info
2023-03-05T08:33:54,996   writing FunID.egg-info/PKG-INFO
2023-03-05T08:33:54,998   writing dependency_links to FunID.egg-info/dependency_links.txt
2023-03-05T08:33:55,000   writing entry points to FunID.egg-info/entry_points.txt
2023-03-05T08:33:55,002   writing requirements to FunID.egg-info/requires.txt
2023-03-05T08:33:55,003   writing top-level names to FunID.egg-info/top_level.txt
2023-03-05T08:33:55,034   reading manifest file 'FunID.egg-info/SOURCES.txt'
2023-03-05T08:33:55,049   adding license file 'LICENSE'
2023-03-05T08:33:55,057   writing manifest file 'FunID.egg-info/SOURCES.txt'
2023-03-05T08:33:55,060   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,061       !!


2023-03-05T08:33:55,061       ############################
2023-03-05T08:33:55,061       # Package would be ignored #
2023-03-05T08:33:55,061       ############################
2023-03-05T08:33:55,061       Python recognizes 'funid.external' as an importable package,
2023-03-05T08:33:55,062       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,062       'funid.external' has been automatically added to the distribution only
2023-03-05T08:33:55,062       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,062       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,062       Please make sure that 'funid.external' is included as a package by using
2023-03-05T08:33:55,062       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,063       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,063       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,063       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,063       documentation page.


2023-03-05T08:33:55,063   !!

2023-03-05T08:33:55,064     check.warn(importable)
2023-03-05T08:33:55,064   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.BLAST_Windows' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,064       !!


2023-03-05T08:33:55,064       ############################
2023-03-05T08:33:55,064       # Package would be ignored #
2023-03-05T08:33:55,064       ############################
2023-03-05T08:33:55,065       Python recognizes 'funid.external.BLAST_Windows' as an importable package,
2023-03-05T08:33:55,065       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,065       'funid.external.BLAST_Windows' has been automatically added to the distribution only
2023-03-05T08:33:55,065       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,065       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,065       Please make sure that 'funid.external.BLAST_Windows' is included as a package by using
2023-03-05T08:33:55,066       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,066       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,066       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,066       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,066       documentation page.


2023-03-05T08:33:55,066   !!

2023-03-05T08:33:55,067     check.warn(importable)
2023-03-05T08:33:55,067   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.BLAST_Windows.bin' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,067       !!


2023-03-05T08:33:55,067       ############################
2023-03-05T08:33:55,067       # Package would be ignored #
2023-03-05T08:33:55,067       ############################
2023-03-05T08:33:55,068       Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package,
2023-03-05T08:33:55,068       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,068       'funid.external.BLAST_Windows.bin' has been automatically added to the distribution only
2023-03-05T08:33:55,068       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,068       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,068       Please make sure that 'funid.external.BLAST_Windows.bin' is included as a package by using
2023-03-05T08:33:55,068       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,069       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,069       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,069       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,069       documentation page.


2023-03-05T08:33:55,069   !!

2023-03-05T08:33:55,070     check.warn(importable)
2023-03-05T08:33:55,070   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.BLAST_Windows.doc' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,070       !!


2023-03-05T08:33:55,070       ############################
2023-03-05T08:33:55,070       # Package would be ignored #
2023-03-05T08:33:55,070       ############################
2023-03-05T08:33:55,071       Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package,
2023-03-05T08:33:55,071       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,071       'funid.external.BLAST_Windows.doc' has been automatically added to the distribution only
2023-03-05T08:33:55,071       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,071       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,071       Please make sure that 'funid.external.BLAST_Windows.doc' is included as a package by using
2023-03-05T08:33:55,072       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,072       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,072       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,072       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,072       documentation page.


2023-03-05T08:33:55,072   !!

2023-03-05T08:33:55,073     check.warn(importable)
2023-03-05T08:33:55,073   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.FastTree_Windows' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,073       !!


2023-03-05T08:33:55,073       ############################
2023-03-05T08:33:55,073       # Package would be ignored #
2023-03-05T08:33:55,073       ############################
2023-03-05T08:33:55,074       Python recognizes 'funid.external.FastTree_Windows' as an importable package,
2023-03-05T08:33:55,074       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,074       'funid.external.FastTree_Windows' has been automatically added to the distribution only
2023-03-05T08:33:55,074       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,074       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,074       Please make sure that 'funid.external.FastTree_Windows' is included as a package by using
2023-03-05T08:33:55,074       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,075       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,075       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,075       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,075       documentation page.


2023-03-05T08:33:55,075   !!

2023-03-05T08:33:55,075     check.warn(importable)
2023-03-05T08:33:55,076   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.RAxML_Windows' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,076       !!


2023-03-05T08:33:55,076       ############################
2023-03-05T08:33:55,076       # Package would be ignored #
2023-03-05T08:33:55,076       ############################
2023-03-05T08:33:55,076       Python recognizes 'funid.external.RAxML_Windows' as an importable package,
2023-03-05T08:33:55,077       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,077       'funid.external.RAxML_Windows' has been automatically added to the distribution only
2023-03-05T08:33:55,077       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,077       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,077       Please make sure that 'funid.external.RAxML_Windows' is included as a package by using
2023-03-05T08:33:55,077       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,077       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,078       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,078       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,078       documentation page.


2023-03-05T08:33:55,078   !!

2023-03-05T08:33:55,078     check.warn(importable)
2023-03-05T08:33:55,079   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.mmseqs_Windows' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,079       !!


2023-03-05T08:33:55,079       ############################
2023-03-05T08:33:55,079       # Package would be ignored #
2023-03-05T08:33:55,079       ############################
2023-03-05T08:33:55,079       Python recognizes 'funid.external.mmseqs_Windows' as an importable package,
2023-03-05T08:33:55,080       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,080       'funid.external.mmseqs_Windows' has been automatically added to the distribution only
2023-03-05T08:33:55,080       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,080       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,080       Please make sure that 'funid.external.mmseqs_Windows' is included as a package by using
2023-03-05T08:33:55,080       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,080       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,081       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,081       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,081       documentation page.


2023-03-05T08:33:55,081   !!

2023-03-05T08:33:55,081     check.warn(importable)
2023-03-05T08:33:55,082   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.mmseqs_Windows.bin' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,082       !!


2023-03-05T08:33:55,082       ############################
2023-03-05T08:33:55,082       # Package would be ignored #
2023-03-05T08:33:55,082       ############################
2023-03-05T08:33:55,082       Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package,
2023-03-05T08:33:55,082       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,083       'funid.external.mmseqs_Windows.bin' has been automatically added to the distribution only
2023-03-05T08:33:55,083       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,083       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,083       Please make sure that 'funid.external.mmseqs_Windows.bin' is included as a package by using
2023-03-05T08:33:55,083       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,083       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,083       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,084       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,084       documentation page.


2023-03-05T08:33:55,084   !!

2023-03-05T08:33:55,084     check.warn(importable)
2023-03-05T08:33:55,084   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.mmseqs_Windows.examples' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,084       !!


2023-03-05T08:33:55,085       ############################
2023-03-05T08:33:55,085       # Package would be ignored #
2023-03-05T08:33:55,085       ############################
2023-03-05T08:33:55,085       Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package,
2023-03-05T08:33:55,085       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,085       'funid.external.mmseqs_Windows.examples' has been automatically added to the distribution only
2023-03-05T08:33:55,086       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,086       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,086       Please make sure that 'funid.external.mmseqs_Windows.examples' is included as a package by using
2023-03-05T08:33:55,086       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,086       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,087       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,087       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,087       documentation page.


2023-03-05T08:33:55,087   !!

2023-03-05T08:33:55,088     check.warn(importable)
2023-03-05T08:33:55,088   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.mmseqs_Windows.matrices' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,088       !!


2023-03-05T08:33:55,089       ############################
2023-03-05T08:33:55,089       # Package would be ignored #
2023-03-05T08:33:55,089       ############################
2023-03-05T08:33:55,089       Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package,
2023-03-05T08:33:55,089       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,089       'funid.external.mmseqs_Windows.matrices' has been automatically added to the distribution only
2023-03-05T08:33:55,090       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,090       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,090       Please make sure that 'funid.external.mmseqs_Windows.matrices' is included as a package by using
2023-03-05T08:33:55,090       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,090       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,090       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,091       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,091       documentation page.


2023-03-05T08:33:55,091   !!

2023-03-05T08:33:55,091     check.warn(importable)
2023-03-05T08:33:55,092   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.external.mmseqs_Windows.util' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,092       !!


2023-03-05T08:33:55,092       ############################
2023-03-05T08:33:55,092       # Package would be ignored #
2023-03-05T08:33:55,093       ############################
2023-03-05T08:33:55,093       Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package,
2023-03-05T08:33:55,093       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,093       'funid.external.mmseqs_Windows.util' has been automatically added to the distribution only
2023-03-05T08:33:55,093       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,094       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,094       Please make sure that 'funid.external.mmseqs_Windows.util' is included as a package by using
2023-03-05T08:33:55,094       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,094       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,095       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,095       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,095       documentation page.


2023-03-05T08:33:55,096   !!

2023-03-05T08:33:55,096     check.warn(importable)
2023-03-05T08:33:55,096   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.test_dataset.penicillium' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,096       !!


2023-03-05T08:33:55,097       ############################
2023-03-05T08:33:55,097       # Package would be ignored #
2023-03-05T08:33:55,097       ############################
2023-03-05T08:33:55,097       Python recognizes 'funid.test_dataset.penicillium' as an importable package,
2023-03-05T08:33:55,097       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,097       'funid.test_dataset.penicillium' has been automatically added to the distribution only
2023-03-05T08:33:55,098       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,098       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,098       Please make sure that 'funid.test_dataset.penicillium' is included as a package by using
2023-03-05T08:33:55,098       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,098       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,098       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,099       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,099       documentation page.


2023-03-05T08:33:55,099   !!

2023-03-05T08:33:55,099     check.warn(importable)
2023-03-05T08:33:55,099   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.test_dataset.penicillium.DB' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,099       !!


2023-03-05T08:33:55,100       ############################
2023-03-05T08:33:55,100       # Package would be ignored #
2023-03-05T08:33:55,100       ############################
2023-03-05T08:33:55,100       Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package,
2023-03-05T08:33:55,100       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,100       'funid.test_dataset.penicillium.DB' has been automatically added to the distribution only
2023-03-05T08:33:55,101       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,101       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,101       Please make sure that 'funid.test_dataset.penicillium.DB' is included as a package by using
2023-03-05T08:33:55,101       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,101       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,101       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,102       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,102       documentation page.


2023-03-05T08:33:55,102   !!

2023-03-05T08:33:55,102     check.warn(importable)
2023-03-05T08:33:55,102   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'funid.test_dataset.penicillium.Query' as data is deprecated, please list it in `packages`.
2023-03-05T08:33:55,102       !!


2023-03-05T08:33:55,103       ############################
2023-03-05T08:33:55,103       # Package would be ignored #
2023-03-05T08:33:55,103       ############################
2023-03-05T08:33:55,103       Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package,
2023-03-05T08:33:55,103       but it is not listed in the `packages` configuration of setuptools.

2023-03-05T08:33:55,103       'funid.test_dataset.penicillium.Query' has been automatically added to the distribution only
2023-03-05T08:33:55,104       because it may contain data files, but this behavior is likely to change
2023-03-05T08:33:55,104       in future versions of setuptools (and therefore is considered deprecated).

2023-03-05T08:33:55,104       Please make sure that 'funid.test_dataset.penicillium.Query' is included as a package by using
2023-03-05T08:33:55,104       the `packages` configuration field or the proper discovery methods
2023-03-05T08:33:55,104       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-03-05T08:33:55,104       instead of `find_packages(...)`/`find:`).

2023-03-05T08:33:55,104       You can read more about "package discovery" and "data files" on setuptools
2023-03-05T08:33:55,105       documentation page.


2023-03-05T08:33:55,105   !!

2023-03-05T08:33:55,105     check.warn(importable)
2023-03-05T08:33:55,105   creating build/lib/funid/external
2023-03-05T08:33:55,105   copying funid/external/MAFFT_LICENSE -> build/lib/funid/external
2023-03-05T08:33:55,105   copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external
2023-03-05T08:33:55,622   copying funid/external/__init__.py -> build/lib/funid/external
2023-03-05T08:33:55,624   creating build/lib/funid/external/BLAST_Windows
2023-03-05T08:33:55,625   copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows
2023-03-05T08:33:55,629   creating build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:55,630   copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:55,986   copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:55,990   copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:55,993   copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:55,997   copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:56,228   copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:56,233   copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin
2023-03-05T08:33:56,236   creating build/lib/funid/external/BLAST_Windows/doc
2023-03-05T08:33:56,237   copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc
2023-03-05T08:33:56,239   creating build/lib/funid/external/FastTree_Windows
2023-03-05T08:33:56,240   copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows
2023-03-05T08:33:56,250   creating build/lib/funid/external/Gblocks_Windows_0.91b
2023-03-05T08:33:56,250   creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:56,252   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:56,260   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:56,262   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:56,264   creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation
2023-03-05T08:33:56,265   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation
2023-03-05T08:33:56,269   creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:56,270   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:56,273   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:56,276   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:56,278   copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:56,282   creating build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,283   copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,286   copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,288   copying funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,318   copying funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,349   copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,384   copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,416   copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,446   copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,478   copying funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,509   copying funid/external/RAxML_Windows/raxmlHPC.exe -> build/lib/funid/external/RAxML_Windows
2023-03-05T08:33:56,546   creating build/lib/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:33:56,547   copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:33:56,601   copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:33:56,603   copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:33:56,606   copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:33:56,611   creating build/lib/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:33:56,612   copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:33:56,826   copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:33:57,035   copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:33:57,061   creating build/lib/funid/external/mmseqs_Windows
2023-03-05T08:33:57,061   copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows
2023-03-05T08:33:57,065   copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows
2023-03-05T08:33:57,068   copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows
2023-03-05T08:33:57,070   copying funid/external/mmseqs_Windows/userguide.pdf -> build/lib/funid/external/mmseqs_Windows
2023-03-05T08:33:57,155   creating build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,156   copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,171   copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,176   copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,180   copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,187   copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,230   copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,305   copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,310   copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:57,568   creating build/lib/funid/external/mmseqs_Windows/examples
2023-03-05T08:33:57,569   copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples
2023-03-05T08:33:57,578   creating build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,579   copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,581   copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,584   copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,586   copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,589   copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,591   copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,593   copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,596   copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,598   copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,600   copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,603   copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,605   copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,607   copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,610   copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,612   copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,614   copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,617   copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,619   copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,622   copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,624   copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,627   copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,629   copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,632   copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,634   copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,637   copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,640   copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,642   copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,645   copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,648   copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,650   copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,653   copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,656   copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,658   copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,661   copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,664   copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,666   copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,669   copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,671   copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,674   copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,676   copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,679   copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,681   copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:57,684   creating build/lib/funid/external/mmseqs_Windows/util
2023-03-05T08:33:57,685   copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util
2023-03-05T08:33:57,687   creating build/lib/funid/external/trimal.v1.2rev59
2023-03-05T08:33:57,688   creating build/lib/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:57,689   copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:57,691   copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:57,694   copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:57,697   copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:57,700   creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:57,701   copying funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:57,716   copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:57,732   creating build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,734   copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,739   copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,743   copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,747   copying funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,750   copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,752   copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,755   copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,757   copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,759   copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,762   copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,764   copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,821   copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:57,849   creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,850   copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,855   copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,858   copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,861   copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,865   copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,867   copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,871   copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,874   copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,877   copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,883   copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,885   copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,888   copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,891   copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,894   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,897   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,900   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,902   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,905   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,908   copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,911   copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,913   copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,916   copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:57,919   copying funid/data/Option_manager.xlsx -> build/lib/funid/data
2023-03-05T08:33:57,922   copying funid/data/genus_line.txt -> build/lib/funid/data
2023-03-05T08:33:57,925   creating build/lib/funid/test_dataset
2023-03-05T08:33:57,926   creating build/lib/funid/test_dataset/penicillium
2023-03-05T08:33:57,927   copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium
2023-03-05T08:33:57,930   copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium
2023-03-05T08:33:57,932   creating build/lib/funid/test_dataset/penicillium/DB
2023-03-05T08:33:57,933   copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB
2023-03-05T08:33:57,943   creating build/lib/funid/test_dataset/penicillium/Query
2023-03-05T08:33:57,944   copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query
2023-03-05T08:33:57,951   creating build/lib/funid/preset
2023-03-05T08:33:57,952   copying funid/preset/accurate.yaml -> build/lib/funid/preset
2023-03-05T08:33:57,955   copying funid/preset/fast.yaml -> build/lib/funid/preset
2023-03-05T08:33:57,988   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-03-05T08:33:57,988     warnings.warn(
2023-03-05T08:33:58,013   installing to build/bdist.linux-armv7l/wheel
2023-03-05T08:33:58,013   running install
2023-03-05T08:33:58,039   running install_lib
2023-03-05T08:33:58,062   creating build/bdist.linux-armv7l
2023-03-05T08:33:58,063   creating build/bdist.linux-armv7l/wheel
2023-03-05T08:33:58,065   creating build/bdist.linux-armv7l/wheel/funid
2023-03-05T08:33:58,067   creating build/bdist.linux-armv7l/wheel/funid/external
2023-03-05T08:33:58,070   creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows
2023-03-05T08:33:58,072   creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,073   copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,424   copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,428   copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,431   copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,679   copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,686   copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,689   copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin
2023-03-05T08:33:58,692   creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc
2023-03-05T08:33:58,694   copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc
2023-03-05T08:33:58,696   copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows
2023-03-05T08:33:58,701   copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external
2023-03-05T08:33:58,705   creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows
2023-03-05T08:33:58,707   copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows
2023-03-05T08:33:58,719   creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59
2023-03-05T08:33:58,721   creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:58,723   creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:58,724   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:58,742   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin
2023-03-05T08:33:58,758   creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,759   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,762   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,765   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,768   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,772   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,774   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,777   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,781   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,784   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,788   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,791   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,793   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,796   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,798   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,801   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,803   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,806   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,810   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,813   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,816   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,818   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,821   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source
2023-03-05T08:33:58,824   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:58,826   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:58,830   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:58,832   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl
2023-03-05T08:33:58,835   creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,836   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,839   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,843   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,847   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,851   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,853   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,856   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,858   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,860   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,892   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,894   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,897   copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset
2023-03-05T08:33:58,946   copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external
2023-03-05T08:33:58,948   copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external
2023-03-05T08:33:59,503   creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b
2023-03-05T08:33:59,504   creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:59,505   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:59,514   creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation
2023-03-05T08:33:59,515   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation
2023-03-05T08:33:59,518   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:59,520   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b
2023-03-05T08:33:59,523   creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:59,524   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:59,526   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:59,528   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:59,531   copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments
2023-03-05T08:33:59,533   creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows
2023-03-05T08:33:59,535   creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,536   copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,551   copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,625   copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,630   copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,890   copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,894   copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,900   copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,942   copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin
2023-03-05T08:33:59,947   creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util
2023-03-05T08:33:59,948   copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util
2023-03-05T08:33:59,951   creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples
2023-03-05T08:33:59,952   copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples
2023-03-05T08:33:59,961   copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows
2023-03-05T08:33:59,965   copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows
2023-03-05T08:33:59,969   creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,971   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,973   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,976   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,978   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,980   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,983   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,985   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,987   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,990   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,992   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,995   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:33:59,997   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,000   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,002   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,004   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,007   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,009   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,011   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,014   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,016   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,019   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,021   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,024   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,026   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,029   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,031   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,034   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,036   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,039   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,041   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,044   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,046   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,048   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,051   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,054   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,057   copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,060   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,063   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,065   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,068   copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,071   copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,073   copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices
2023-03-05T08:34:00,076   copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows
2023-03-05T08:34:00,079   copying build/lib/funid/external/mmseqs_Windows/userguide.pdf -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows
2023-03-05T08:34:00,168   creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,169   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,205   copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,207   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,241   copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,245   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,280   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,309   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,345   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,375   copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,410   copying build/lib/funid/external/RAxML_Windows/raxmlHPC.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows
2023-03-05T08:34:00,441   creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:34:00,443   creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:34:00,444   copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:34:00,619   copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:34:00,830   copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin
2023-03-05T08:34:00,856   copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:34:00,861   copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:34:00,863   copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:34:00,910   copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows
2023-03-05T08:34:00,913   copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid
2023-03-05T08:34:00,915   creating build/bdist.linux-armv7l/wheel/funid/data
2023-03-05T08:34:00,916   copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data
2023-03-05T08:34:00,918   copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data
2023-03-05T08:34:00,921   copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data
2023-03-05T08:34:00,924   copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid
2023-03-05T08:34:00,928   creating build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,929   copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,932   copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,934   copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,937   copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,940   copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,942   copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,944   copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,946   copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,948   copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,951   copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,955   copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,957   copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,960   copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,962   copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,965   copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,967   copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,970   copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,973   copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,976   copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,978   copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,981   copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,983   copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,986   copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,989   copying build/lib/funid/src/multigene.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,991   copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,994   copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src
2023-03-05T08:34:00,997   copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid
2023-03-05T08:34:01,000   creating build/bdist.linux-armv7l/wheel/funid/preset
2023-03-05T08:34:01,001   copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset
2023-03-05T08:34:01,004   copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset
2023-03-05T08:34:01,007   creating build/bdist.linux-armv7l/wheel/funid/test_dataset
2023-03-05T08:34:01,008   creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium
2023-03-05T08:34:01,009   copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium
2023-03-05T08:34:01,012   copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium
2023-03-05T08:34:01,015   creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query
2023-03-05T08:34:01,016   copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query
2023-03-05T08:34:01,022   creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB
2023-03-05T08:34:01,023   copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB
2023-03-05T08:34:01,032   running install_egg_info
2023-03-05T08:34:01,060   Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.4-py3.9.egg-info
2023-03-05T08:34:01,076   running install_scripts
2023-03-05T08:34:01,100   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2023-03-05T08:34:01,106   creating build/bdist.linux-armv7l/wheel/FunID-0.3.4.dist-info/WHEEL
2023-03-05T08:34:01,109   creating '/tmp/pip-wheel-a4xii3xw/FunID-0.3.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-03-05T08:34:01,114   adding 'funid/FunID_GUI.py'
2023-03-05T08:34:01,115   adding 'funid/__init__.py'
2023-03-05T08:34:01,117   adding 'funid/main.py'
2023-03-05T08:34:01,121   adding 'funid/data/Option_manager.xlsx'
2023-03-05T08:34:01,122   adding 'funid/data/__init__.py'
2023-03-05T08:34:01,130   adding 'funid/data/genus_line.txt'
2023-03-05T08:34:01,137   adding 'funid/external/MAFFT_LICENSE'
2023-03-05T08:34:04,253   adding 'funid/external/MAFFT_Windows.zip'
2023-03-05T08:34:04,421   adding 'funid/external/__init__.py'
2023-03-05T08:34:04,431   adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe'
2023-03-05T08:34:07,401   adding 'funid/external/BLAST_Windows/bin/blastn.exe'
2023-03-05T08:34:07,507   adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py'
2023-03-05T08:34:07,509   adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh'
2023-03-05T08:34:07,513   adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl'
2023-03-05T08:34:09,577   adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe'
2023-03-05T08:34:09,677   adding 'funid/external/BLAST_Windows/bin/nghttp2.dll'
2023-03-05T08:34:09,681   adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl'
2023-03-05T08:34:09,683   adding 'funid/external/BLAST_Windows/doc/README.txt'
2023-03-05T08:34:09,740   adding 'funid/external/FastTree_Windows/FastTree.exe'
2023-03-05T08:34:09,782   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe'
2023-03-05T08:34:09,785   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir'
2023-03-05T08:34:09,786   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths'
2023-03-05T08:34:09,792   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html'
2023-03-05T08:34:09,794   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir'
2023-03-05T08:34:09,797   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir'
2023-03-05T08:34:09,798   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir'
2023-03-05T08:34:09,801   adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir'
2023-03-05T08:34:09,808   adding 'funid/external/RAxML_Windows/GPL-3.0.txt'
2023-03-05T08:34:09,810   adding 'funid/external/RAxML_Windows/README'
2023-03-05T08:34:10,072   adding 'funid/external/RAxML_Windows/raxmlHPC-AVX.exe'
2023-03-05T08:34:10,342   adding 'funid/external/RAxML_Windows/raxmlHPC-AVX2.exe'
2023-03-05T08:34:10,643   adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe'
2023-03-05T08:34:10,947   adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe'
2023-03-05T08:34:11,255   adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe'
2023-03-05T08:34:11,555   adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe'
2023-03-05T08:34:11,832   adding 'funid/external/RAxML_Windows/raxmlHPC-SSE3.exe'
2023-03-05T08:34:12,099   adding 'funid/external/RAxML_Windows/raxmlHPC.exe'
2023-03-05T08:34:12,191   adding 'funid/external/iqtree-2.1.3-Windows/example.cf'
2023-03-05T08:34:12,206   adding 'funid/external/iqtree-2.1.3-Windows/example.nex'
2023-03-05T08:34:12,219   adding 'funid/external/iqtree-2.1.3-Windows/example.phy'
2023-03-05T08:34:12,250   adding 'funid/external/iqtree-2.1.3-Windows/models.nex'
2023-03-05T08:34:13,976   adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe'
2023-03-05T08:34:15,762   adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe'
2023-03-05T08:34:16,216   adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll'
2023-03-05T08:34:16,230   adding 'funid/external/mmseqs_Windows/LICENSE.md'
2023-03-05T08:34:16,233   adding 'funid/external/mmseqs_Windows/README.md'
2023-03-05T08:34:16,235   adding 'funid/external/mmseqs_Windows/mmseqs.bat'
2023-03-05T08:34:16,752   adding 'funid/external/mmseqs_Windows/userguide.pdf'
2023-03-05T08:34:16,912   adding 'funid/external/mmseqs_Windows/bin/busybox.exe'
2023-03-05T08:34:16,927   adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll'
2023-03-05T08:34:16,941   adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll'
2023-03-05T08:34:16,985   adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll'
2023-03-05T08:34:17,254   adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll'
2023-03-05T08:34:17,859   adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll'
2023-03-05T08:34:17,898   adding 'funid/external/mmseqs_Windows/bin/cygz.dll'
2023-03-05T08:34:21,554   adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe'
2023-03-05T08:34:21,679   adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta'
2023-03-05T08:34:21,684   adding 'funid/external/mmseqs_Windows/matrices/PAM10.out'
2023-03-05T08:34:21,686   adding 'funid/external/mmseqs_Windows/matrices/PAM100.out'
2023-03-05T08:34:21,688   adding 'funid/external/mmseqs_Windows/matrices/PAM110.out'
2023-03-05T08:34:21,689   adding 'funid/external/mmseqs_Windows/matrices/PAM120.out'
2023-03-05T08:34:21,691   adding 'funid/external/mmseqs_Windows/matrices/PAM130.out'
2023-03-05T08:34:21,693   adding 'funid/external/mmseqs_Windows/matrices/PAM140.out'
2023-03-05T08:34:21,694   adding 'funid/external/mmseqs_Windows/matrices/PAM150.out'
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2023-03-05T08:34:21,763   adding 'funid/external/trimal.v1.2rev59/trimAl/AUTHORS'
2023-03-05T08:34:21,765   adding 'funid/external/trimal.v1.2rev59/trimAl/CHANGELOG'
2023-03-05T08:34:21,771   adding 'funid/external/trimal.v1.2rev59/trimAl/LICENSE'
2023-03-05T08:34:21,773   adding 'funid/external/trimal.v1.2rev59/trimAl/README'
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2023-03-05T08:34:21,979   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl'
2023-03-05T08:34:21,985   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2'
2023-03-05T08:34:21,987   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat'
2023-03-05T08:34:21,988   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw'
2023-03-05T08:34:21,990   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl'
2023-03-05T08:34:21,992   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy'
2023-03-05T08:34:21,993   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1'
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2023-03-05T08:34:22,192   adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2'
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2023-03-05T08:34:22,390   adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp'
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2023-03-05T08:34:22,398   adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp'
2023-03-05T08:34:22,400   adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h'
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2023-03-05T08:34:22,407   adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile'
2023-03-05T08:34:22,409   adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp'
2023-03-05T08:34:22,414   adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp'
2023-03-05T08:34:22,417   adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp'
2023-03-05T08:34:22,418   adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h'
2023-03-05T08:34:22,421   adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp'
2023-03-05T08:34:22,423   adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h'
2023-03-05T08:34:22,425   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp'
2023-03-05T08:34:22,427   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h'
2023-03-05T08:34:22,429   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp'
2023-03-05T08:34:22,431   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h'
2023-03-05T08:34:22,434   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp'
2023-03-05T08:34:22,436   adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h'
2023-03-05T08:34:22,438   adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp'
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2023-03-05T08:34:22,442   adding 'funid/external/trimal.v1.2rev59/trimAl/source/values.h'
2023-03-05T08:34:22,444   adding 'funid/preset/accurate.yaml'
2023-03-05T08:34:22,446   adding 'funid/preset/fast.yaml'
2023-03-05T08:34:22,448   adding 'funid/src/__init__.py'
2023-03-05T08:34:22,450   adding 'funid/src/align.py'
2023-03-05T08:34:22,453   adding 'funid/src/cluster.py'
2023-03-05T08:34:22,455   adding 'funid/src/command.py'
2023-03-05T08:34:22,458   adding 'funid/src/dataset.py'
2023-03-05T08:34:22,460   adding 'funid/src/ext.py'
2023-03-05T08:34:22,462   adding 'funid/src/hasher.py'
2023-03-05T08:34:22,464   adding 'funid/src/initialize.py'
2023-03-05T08:34:22,466   adding 'funid/src/logger.py'
2023-03-05T08:34:22,467   adding 'funid/src/logics.py'
2023-03-05T08:34:22,471   adding 'funid/src/manage_input.py'
2023-03-05T08:34:22,473   adding 'funid/src/modeltest.py'
2023-03-05T08:34:22,475   adding 'funid/src/multigene.py'
2023-03-05T08:34:22,477   adding 'funid/src/ncbi.py'
2023-03-05T08:34:22,479   adding 'funid/src/opt_generator.py'
2023-03-05T08:34:22,481   adding 'funid/src/patch.py'
2023-03-05T08:34:22,485   adding 'funid/src/reporter.py'
2023-03-05T08:34:22,487   adding 'funid/src/save.py'
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2023-03-05T08:34:22,499   adding 'funid/src/tree_interpretation.py'
2023-03-05T08:34:22,503   adding 'funid/src/tree_interpretation_pipe.py'
2023-03-05T08:34:22,504   adding 'funid/src/trim.py'
2023-03-05T08:34:22,510   adding 'funid/src/validate_option.py'
2023-03-05T08:34:22,512   adding 'funid/src/validation.py'
2023-03-05T08:34:22,514   adding 'funid/test_dataset/penicillium/Options.config'
2023-03-05T08:34:22,516   adding 'funid/test_dataset/penicillium/preset.yaml'
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2023-03-05T08:34:22,574   adding 'funid/test_dataset/penicillium/Query/Query.xlsx'
2023-03-05T08:34:22,581   adding 'FunID-0.3.4.dist-info/LICENSE'
2023-03-05T08:34:22,583   adding 'FunID-0.3.4.dist-info/METADATA'
2023-03-05T08:34:22,584   adding 'FunID-0.3.4.dist-info/WHEEL'
2023-03-05T08:34:22,585   adding 'FunID-0.3.4.dist-info/entry_points.txt'
2023-03-05T08:34:22,587   adding 'FunID-0.3.4.dist-info/top_level.txt'
2023-03-05T08:34:22,590   adding 'FunID-0.3.4.dist-info/RECORD'
2023-03-05T08:34:22,687   removing build/bdist.linux-armv7l/wheel
2023-03-05T08:34:22,875   Building wheel for funid (setup.py): finished with status 'done'
2023-03-05T08:34:23,577   Created wheel for funid: filename=FunID-0.3.4-py3-none-any.whl size=65428619 sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67
2023-03-05T08:34:23,578   Stored in directory: /tmp/pip-ephem-wheel-cache-xdedd2g1/wheels/e0/c0/26/8ac359d12d9c4872b4d647bb5187531be075a4bc73d08cefd0
2023-03-05T08:34:23,627 Successfully built funid
2023-03-05T08:34:25,307 Removed build tracker: '/tmp/pip-build-tracker-pxss10xn'