2023-03-07T09:37:34,260 Created temporary directory: /tmp/pip-ephem-wheel-cache-lqb4t0t8
2023-03-07T09:37:34,265 Created temporary directory: /tmp/pip-build-tracker-o_u588pd
2023-03-07T09:37:34,266 Initialized build tracking at /tmp/pip-build-tracker-o_u588pd
2023-03-07T09:37:34,267 Created build tracker: /tmp/pip-build-tracker-o_u588pd
2023-03-07T09:37:34,267 Entered build tracker: /tmp/pip-build-tracker-o_u588pd
2023-03-07T09:37:34,268 Created temporary directory: /tmp/pip-wheel-o3r0bhhl
2023-03-07T09:37:34,279 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-07T09:37:34,284 Created temporary directory: /tmp/pip-ephem-wheel-cache-_n5n2_94
2023-03-07T09:37:34,338 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-07T09:37:34,345 2 location(s) to search for versions of papyrus-scripts:
2023-03-07T09:37:34,345 * https://pypi.org/simple/papyrus-scripts/
2023-03-07T09:37:34,345 * https://www.piwheels.org/simple/papyrus-scripts/
2023-03-07T09:37:34,346 Fetching project page and analyzing links: https://pypi.org/simple/papyrus-scripts/
2023-03-07T09:37:34,347 Getting page https://pypi.org/simple/papyrus-scripts/
2023-03-07T09:37:34,351 Found index url https://pypi.org/simple
2023-03-07T09:37:34,587 Fetched page https://pypi.org/simple/papyrus-scripts/ as application/vnd.pypi.simple.v1+json
2023-03-07T09:37:34,589   Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/b5/19/95564c6182f53424b98a9b226fad2732a775e1b03240f98026d1f4a31c09/papyrus_scripts-1.0.0-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/)
2023-03-07T09:37:34,590   Found link https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.0
2023-03-07T09:37:34,591 Fetching project page and analyzing links: https://www.piwheels.org/simple/papyrus-scripts/
2023-03-07T09:37:34,591 Getting page https://www.piwheels.org/simple/papyrus-scripts/
2023-03-07T09:37:34,593 Found index url https://www.piwheels.org/simple
2023-03-07T09:37:34,820 Fetched page https://www.piwheels.org/simple/papyrus-scripts/ as text/html
2023-03-07T09:37:34,822 Skipping link: not a file: https://www.piwheels.org/simple/papyrus-scripts/
2023-03-07T09:37:34,823 Skipping link: not a file: https://pypi.org/simple/papyrus-scripts/
2023-03-07T09:37:34,859 Given no hashes to check 1 links for project 'papyrus-scripts': discarding no candidates
2023-03-07T09:37:34,889 Collecting papyrus-scripts==1.0.0
2023-03-07T09:37:34,894   Created temporary directory: /tmp/pip-unpack-zrpzpnv5
2023-03-07T09:37:35,138   Downloading papyrus_scripts-1.0.0.tar.gz (68 kB)
2023-03-07T09:37:35,350   Added papyrus-scripts==1.0.0 from https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-o_u588pd'
2023-03-07T09:37:35,353   Running setup.py (path:/tmp/pip-wheel-o3r0bhhl/papyrus-scripts_31dade1992294d42bb4fd53d824d525a/setup.py) egg_info for package papyrus-scripts
2023-03-07T09:37:35,354   Created temporary directory: /tmp/pip-pip-egg-info-yimqgv5d
2023-03-07T09:37:35,355   Preparing metadata (setup.py): started
2023-03-07T09:37:35,357   Running command python setup.py egg_info
2023-03-07T09:37:37,010   running egg_info
2023-03-07T09:37:37,014   creating /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info
2023-03-07T09:37:37,069   writing /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/PKG-INFO
2023-03-07T09:37:37,074   writing dependency_links to /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/dependency_links.txt
2023-03-07T09:37:37,078   writing entry points to /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/entry_points.txt
2023-03-07T09:37:37,082   writing requirements to /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/requires.txt
2023-03-07T09:37:37,084   writing top-level names to /tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/top_level.txt
2023-03-07T09:37:37,086   writing manifest file '/tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/SOURCES.txt'
2023-03-07T09:37:37,275   reading manifest file '/tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/SOURCES.txt'
2023-03-07T09:37:37,279   adding license file 'LICENSE'
2023-03-07T09:37:37,285   writing manifest file '/tmp/pip-pip-egg-info-yimqgv5d/papyrus_scripts.egg-info/SOURCES.txt'
2023-03-07T09:37:37,287   /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead.
2023-03-07T09:37:37,288     warnings.warn(msg, warning_class)
2023-03-07T09:37:37,405   Preparing metadata (setup.py): finished with status 'done'
2023-03-07T09:37:37,420   Source in /tmp/pip-wheel-o3r0bhhl/papyrus-scripts_31dade1992294d42bb4fd53d824d525a has version 1.0.0, which satisfies requirement papyrus-scripts==1.0.0 from https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz
2023-03-07T09:37:37,422   Removed papyrus-scripts==1.0.0 from https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-o_u588pd'
2023-03-07T09:37:37,434 Created temporary directory: /tmp/pip-unpack-y3n34sn1
2023-03-07T09:37:37,435 Building wheels for collected packages: papyrus-scripts
2023-03-07T09:37:37,445   Created temporary directory: /tmp/pip-wheel-4tzbojxx
2023-03-07T09:37:37,446   Building wheel for papyrus-scripts (setup.py): started
2023-03-07T09:37:37,448   Destination directory: /tmp/pip-wheel-4tzbojxx
2023-03-07T09:37:37,448   Running command python setup.py bdist_wheel
2023-03-07T09:37:38,712   /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead.
2023-03-07T09:37:38,713     warnings.warn(msg, warning_class)
2023-03-07T09:37:39,578   running bdist_wheel
2023-03-07T09:37:40,265   running build
2023-03-07T09:37:40,265   running build_py
2023-03-07T09:37:40,328   creating build
2023-03-07T09:37:40,329   creating build/lib
2023-03-07T09:37:40,331   creating build/lib/papyrus_scripts
2023-03-07T09:37:40,333   copying src/papyrus_scripts/matchRCSB.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,338   copying src/papyrus_scripts/download.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,343   copying src/papyrus_scripts/neuralnet.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,349   copying src/papyrus_scripts/subsim_search.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,358   copying src/papyrus_scripts/fingerprint.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,363   copying src/papyrus_scripts/version.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,368   copying src/papyrus_scripts/preprocess.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,376   copying src/papyrus_scripts/cli.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,382   copying src/papyrus_scripts/__init__.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,386   copying src/papyrus_scripts/__main__.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,391   copying src/papyrus_scripts/modelling.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,408   copying src/papyrus_scripts/reader.py -> build/lib/papyrus_scripts
2023-03-07T09:37:40,416   creating build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,419   copying src/papyrus_scripts/utils/mol_reader.py -> build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,425   copying src/papyrus_scripts/utils/__init__.py -> build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,429   copying src/papyrus_scripts/utils/UniprotMatch.py -> build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,434   copying src/papyrus_scripts/utils/IO.py -> build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,439   running egg_info
2023-03-07T09:37:40,572   writing src/papyrus_scripts.egg-info/PKG-INFO
2023-03-07T09:37:40,577   writing dependency_links to src/papyrus_scripts.egg-info/dependency_links.txt
2023-03-07T09:37:40,582   writing entry points to src/papyrus_scripts.egg-info/entry_points.txt
2023-03-07T09:37:40,586   writing requirements to src/papyrus_scripts.egg-info/requires.txt
2023-03-07T09:37:40,588   writing top-level names to src/papyrus_scripts.egg-info/top_level.txt
2023-03-07T09:37:40,654   reading manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt'
2023-03-07T09:37:40,659   adding license file 'LICENSE'
2023-03-07T09:37:40,667   writing manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt'
2023-03-07T09:37:40,673   copying src/papyrus_scripts/utils/links.json -> build/lib/papyrus_scripts/utils
2023-03-07T09:37:40,743   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-03-07T09:37:40,744     setuptools.SetuptoolsDeprecationWarning,
2023-03-07T09:37:40,800   installing to build/bdist.linux-armv7l/wheel
2023-03-07T09:37:40,801   running install
2023-03-07T09:37:40,861   running install_lib
2023-03-07T09:37:40,920   creating build/bdist.linux-armv7l
2023-03-07T09:37:40,921   creating build/bdist.linux-armv7l/wheel
2023-03-07T09:37:40,924   creating build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,926   copying build/lib/papyrus_scripts/matchRCSB.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,931   copying build/lib/papyrus_scripts/download.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,936   copying build/lib/papyrus_scripts/neuralnet.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,942   copying build/lib/papyrus_scripts/subsim_search.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,949   copying build/lib/papyrus_scripts/fingerprint.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,953   copying build/lib/papyrus_scripts/version.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,957   copying build/lib/papyrus_scripts/preprocess.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,964   creating build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,966   copying build/lib/papyrus_scripts/utils/links.json -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,971   copying build/lib/papyrus_scripts/utils/mol_reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,976   copying build/lib/papyrus_scripts/utils/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,980   copying build/lib/papyrus_scripts/utils/UniprotMatch.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,984   copying build/lib/papyrus_scripts/utils/IO.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-03-07T09:37:40,989   copying build/lib/papyrus_scripts/cli.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,995   copying build/lib/papyrus_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:40,998   copying build/lib/papyrus_scripts/__main__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:41,002   copying build/lib/papyrus_scripts/modelling.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:41,010   copying build/lib/papyrus_scripts/reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-03-07T09:37:41,015   running install_egg_info
2023-03-07T09:37:41,080   Copying src/papyrus_scripts.egg-info to build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.0-py3.7.egg-info
2023-03-07T09:37:41,104   running install_scripts
2023-03-07T09:37:41,150   creating build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.0.dist-info/WHEEL
2023-03-07T09:37:41,155   creating '/tmp/pip-wheel-4tzbojxx/papyrus_scripts-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-03-07T09:37:41,161   adding 'papyrus_scripts/__init__.py'
2023-03-07T09:37:41,163   adding 'papyrus_scripts/__main__.py'
2023-03-07T09:37:41,170   adding 'papyrus_scripts/cli.py'
2023-03-07T09:37:41,175   adding 'papyrus_scripts/download.py'
2023-03-07T09:37:41,179   adding 'papyrus_scripts/fingerprint.py'
2023-03-07T09:37:41,183   adding 'papyrus_scripts/matchRCSB.py'
2023-03-07T09:37:41,195   adding 'papyrus_scripts/modelling.py'
2023-03-07T09:37:41,202   adding 'papyrus_scripts/neuralnet.py'
2023-03-07T09:37:41,212   adding 'papyrus_scripts/preprocess.py'
2023-03-07T09:37:41,218   adding 'papyrus_scripts/reader.py'
2023-03-07T09:37:41,230   adding 'papyrus_scripts/subsim_search.py'
2023-03-07T09:37:41,233   adding 'papyrus_scripts/version.py'
2023-03-07T09:37:41,239   adding 'papyrus_scripts/utils/IO.py'
2023-03-07T09:37:41,244   adding 'papyrus_scripts/utils/UniprotMatch.py'
2023-03-07T09:37:41,246   adding 'papyrus_scripts/utils/__init__.py'
2023-03-07T09:37:41,250   adding 'papyrus_scripts/utils/links.json'
2023-03-07T09:37:41,255   adding 'papyrus_scripts/utils/mol_reader.py'
2023-03-07T09:37:41,260   adding 'papyrus_scripts-1.0.0.dist-info/LICENSE'
2023-03-07T09:37:41,264   adding 'papyrus_scripts-1.0.0.dist-info/METADATA'
2023-03-07T09:37:41,266   adding 'papyrus_scripts-1.0.0.dist-info/WHEEL'
2023-03-07T09:37:41,268   adding 'papyrus_scripts-1.0.0.dist-info/entry_points.txt'
2023-03-07T09:37:41,270   adding 'papyrus_scripts-1.0.0.dist-info/top_level.txt'
2023-03-07T09:37:41,272   adding 'papyrus_scripts-1.0.0.dist-info/RECORD'
2023-03-07T09:37:41,277   removing build/bdist.linux-armv7l/wheel
2023-03-07T09:37:41,458   Building wheel for papyrus-scripts (setup.py): finished with status 'done'
2023-03-07T09:37:41,467   Created wheel for papyrus-scripts: filename=papyrus_scripts-1.0.0-py3-none-any.whl size=71584 sha256=0547595805abc574ec34f214d521dcf762c43e1c7da898f1bb95a2c6eda24460
2023-03-07T09:37:41,469   Stored in directory: /tmp/pip-ephem-wheel-cache-_n5n2_94/wheels/43/d7/56/919384147f921d3a48d933305d6bc087dfb787513d72f4eb7a
2023-03-07T09:37:41,499 Successfully built papyrus-scripts
2023-03-07T09:37:41,512 Removed build tracker: '/tmp/pip-build-tracker-o_u588pd'