2023-03-10T16:02:28,041 Created temporary directory: /tmp/pip-ephem-wheel-cache-i41pkwy7 2023-03-10T16:02:28,046 Created temporary directory: /tmp/pip-build-tracker-3sz7yybp 2023-03-10T16:02:28,047 Initialized build tracking at /tmp/pip-build-tracker-3sz7yybp 2023-03-10T16:02:28,047 Created build tracker: /tmp/pip-build-tracker-3sz7yybp 2023-03-10T16:02:28,047 Entered build tracker: /tmp/pip-build-tracker-3sz7yybp 2023-03-10T16:02:28,048 Created temporary directory: /tmp/pip-wheel-3r5kag5m 2023-03-10T16:02:28,059 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-10T16:02:28,065 Created temporary directory: /tmp/pip-ephem-wheel-cache-fa7wwnex 2023-03-10T16:02:28,117 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-10T16:02:28,124 2 location(s) to search for versions of hpo-toolkit: 2023-03-10T16:02:28,124 * https://pypi.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,124 * https://www.piwheels.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,125 Fetching project page and analyzing links: https://pypi.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,126 Getting page https://pypi.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,130 Found index url https://pypi.org/simple 2023-03-10T16:02:28,329 Fetched page https://pypi.org/simple/hpo-toolkit/ as application/vnd.pypi.simple.v1+json 2023-03-10T16:02:28,337 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ca/a8/711d9dcbd5ce3032c2b87c17d4cea73a92d72373279a6797104f385fe772/hpo-toolkit-0.0.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,338 Skipping link: 0.0.1 Requires-Python >=3.8: https://files.pythonhosted.org/packages/ca/a8/711d9dcbd5ce3032c2b87c17d4cea73a92d72373279a6797104f385fe772/hpo-toolkit-0.0.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,339 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/db/4b/fefdb80f7fc92b4582605f934105959e44e73fb42593df986e489b48c639/hpo_toolkit-0.0.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,340 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/97/03/7730068713319df3faff2ee4bfe9f79b27291dcc2aa52bf7e6cbc08037b4/hpo-toolkit-0.1.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,340 Skipping link: 0.1.0 Requires-Python >=3.8: https://files.pythonhosted.org/packages/97/03/7730068713319df3faff2ee4bfe9f79b27291dcc2aa52bf7e6cbc08037b4/hpo-toolkit-0.1.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,341 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/bc/0f/b3d21a75ade171e203465bcd9bacd5ca53c26c9e9a822ba73ff46a93c30c/hpo_toolkit-0.1.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,342 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e2/e6/36ad8215b6c614fef18509b652c2dd66fd3ce6797d7b7d75a35609935505/hpo-toolkit-0.1.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,343 Skipping link: 0.1.1 Requires-Python >=3.8: https://files.pythonhosted.org/packages/e2/e6/36ad8215b6c614fef18509b652c2dd66fd3ce6797d7b7d75a35609935505/hpo-toolkit-0.1.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,343 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/fe/75/20ad6e1322bd96a826c2125746ef2e8d89a74a62c3cd0ba10d96fd3cd358/hpo_toolkit-0.1.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,345 Found link https://files.pythonhosted.org/packages/5f/45/51e64d48d20318801db3281d747451f60a876ec457ce063923c7cad89c6a/hpo-toolkit-0.1.2.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.2 2023-03-10T16:02:28,345 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/58/3f/1209266429cf4dd4c4ee136ba4ca3bb4aa9a6ab9429cab80d418d46b220c/hpo_toolkit-0.1.2-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2023-03-10T16:02:28,347 Found link https://files.pythonhosted.org/packages/fa/5f/eb46e3989329c498db93b7160015714202b11ef1818132264622eef9c552/hpo-toolkit-0.1.3.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3 2023-03-10T16:02:28,347 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/6c/e7/915925e63777254fbde62a3cf37a0f2110368cae8aac1f4274845afe3671/hpo_toolkit-0.1.3-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2023-03-10T16:02:28,349 Found link https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3.post0 2023-03-10T16:02:28,349 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/1d/8a/0ad17020c77918897b9eed16d237bedd1ecc7c4a020c52b28cd46a3c21bb/hpo_toolkit-0.1.3.post0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2023-03-10T16:02:28,350 Fetching project page and analyzing links: https://www.piwheels.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,351 Getting page https://www.piwheels.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,353 Found index url https://www.piwheels.org/simple 2023-03-10T16:02:28,585 Fetched page https://www.piwheels.org/simple/hpo-toolkit/ as text/html 2023-03-10T16:02:28,595 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.3-py3-none-any.whl#sha256=f00d3839e2e2771a1a367a28f4c4cd683421b6945f35798e4f16347b307fb728 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2023-03-10T16:02:28,596 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.2-py3-none-any.whl#sha256=7098761793b2f1fde0dbf8f218e3a42721d05b1443d2405a7b7f7717768f7bdc (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2023-03-10T16:02:28,596 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.1-py3-none-any.whl#sha256=fc1c6e36d51bbdf8cbcc2cee69652c17601fde5f38bffd6a2de33043de5833c6 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,596 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.0-py3-none-any.whl#sha256=281377094b0839266141544d8b624f66426ef3bfd3ab32665265c4daef22c016 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,597 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.0.1-py3-none-any.whl#sha256=1f7dded9eaafd70bfca08fc03a34551b611fe805d4b8aed4594d587bab9b9ee3 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2023-03-10T16:02:28,598 Skipping link: not a file: https://www.piwheels.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,598 Skipping link: not a file: https://pypi.org/simple/hpo-toolkit/ 2023-03-10T16:02:28,631 Given no hashes to check 1 links for project 'hpo-toolkit': discarding no candidates 2023-03-10T16:02:28,661 Collecting hpo-toolkit==0.1.3.post0 2023-03-10T16:02:28,666 Created temporary directory: /tmp/pip-unpack-fkgmk_9c 2023-03-10T16:02:28,903 Downloading hpo-toolkit-0.1.3.post0.tar.gz (67 kB) 2023-03-10T16:02:29,235 Added hpo-toolkit==0.1.3.post0 from https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz to build tracker '/tmp/pip-build-tracker-3sz7yybp' 2023-03-10T16:02:29,244 Created temporary directory: /tmp/pip-build-env-y6l68m7e 2023-03-10T16:02:29,265 Installing build dependencies: started 2023-03-10T16:02:29,267 Running command pip subprocess to install build dependencies 2023-03-10T16:02:31,962 Using pip 23.0.1 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-03-10T16:02:33,175 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-10T16:02:33,231 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-10T16:02:37,026 Collecting setuptools>=65.6.3 2023-03-10T16:02:37,283 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.0-py3-none-any.whl (1.1 MB) 2023-03-10T16:02:42,610 Installing collected packages: setuptools 2023-03-10T16:02:47,062 Successfully installed setuptools-67.6.0 2023-03-10T16:02:47,985 Installing build dependencies: finished with status 'done' 2023-03-10T16:02:47,996 Getting requirements to build wheel: started 2023-03-10T16:02:47,998 Running command Getting requirements to build wheel 2023-03-10T16:02:49,280 No `packages` or `py_modules` configuration, performing automatic discovery. 2023-03-10T16:02:49,281 `src-layout` detected -- analysing ./src 2023-03-10T16:02:49,303 discovered packages -- ['hpotk', 'hpotk.ontology', 'hpotk.model', 'hpotk.algorithm', 'hpotk.constants', 'hpotk.graph', 'hpotk.annotations', 'hpotk.validate', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.graph.csr', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa'] 2023-03-10T16:02:49,304 discovered py_modules -- [] 2023-03-10T16:02:49,860 running egg_info 2023-03-10T16:02:49,869 writing src/hpo_toolkit.egg-info/PKG-INFO 2023-03-10T16:02:49,876 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2023-03-10T16:02:49,881 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2023-03-10T16:02:49,883 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2023-03-10T16:02:49,935 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:02:49,942 adding license file 'LICENSE' 2023-03-10T16:02:49,953 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:02:49,957 /tmp/pip-build-env-y6l68m7e/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-03-10T16:02:49,958 warnings.warn(msg, _BetaConfiguration) 2023-03-10T16:02:50,123 Getting requirements to build wheel: finished with status 'done' 2023-03-10T16:02:50,147 Installing backend dependencies: started 2023-03-10T16:02:50,150 Running command pip subprocess to install backend dependencies 2023-03-10T16:02:52,845 Using pip 23.0.1 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-03-10T16:02:54,053 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-10T16:02:54,110 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-10T16:02:54,986 Collecting wheel 2023-03-10T16:02:55,031 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-03-10T16:02:59,170 Installing collected packages: wheel 2023-03-10T16:02:59,449 Creating /tmp/pip-build-env-y6l68m7e/normal/bin 2023-03-10T16:02:59,455 changing mode of /tmp/pip-build-env-y6l68m7e/normal/bin/wheel to 755 2023-03-10T16:02:59,482 Successfully installed wheel-0.38.4 2023-03-10T16:03:00,346 Installing backend dependencies: finished with status 'done' 2023-03-10T16:03:00,351 Created temporary directory: /tmp/pip-modern-metadata-qa2hqwzn 2023-03-10T16:03:00,358 Preparing metadata (pyproject.toml): started 2023-03-10T16:03:00,360 Running command Preparing metadata (pyproject.toml) 2023-03-10T16:03:01,612 No `packages` or `py_modules` configuration, performing automatic discovery. 2023-03-10T16:03:01,613 `src-layout` detected -- analysing ./src 2023-03-10T16:03:01,627 discovered packages -- ['hpotk', 'hpotk.ontology', 'hpotk.model', 'hpotk.algorithm', 'hpotk.constants', 'hpotk.graph', 'hpotk.annotations', 'hpotk.validate', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.graph.csr', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa'] 2023-03-10T16:03:01,627 discovered py_modules -- [] 2023-03-10T16:03:02,248 running dist_info 2023-03-10T16:03:02,261 creating /tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info 2023-03-10T16:03:02,270 writing /tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/PKG-INFO 2023-03-10T16:03:02,278 writing dependency_links to /tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/dependency_links.txt 2023-03-10T16:03:02,283 writing requirements to /tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/requires.txt 2023-03-10T16:03:02,285 writing top-level names to /tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/top_level.txt 2023-03-10T16:03:02,288 writing manifest file '/tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:03:02,351 reading manifest file '/tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:03:02,356 adding license file 'LICENSE' 2023-03-10T16:03:02,365 writing manifest file '/tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:03:02,367 creating '/tmp/pip-modern-metadata-qa2hqwzn/hpo_toolkit-0.1.3.post0.dist-info' 2023-03-10T16:03:02,453 /tmp/pip-build-env-y6l68m7e/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-03-10T16:03:02,454 warnings.warn(msg, _BetaConfiguration) 2023-03-10T16:03:02,627 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-10T16:03:02,651 Source in /tmp/pip-wheel-3r5kag5m/hpo-toolkit_878c0b54d8ff4aa8aca6bb4c6d8018dc has version 0.1.3.post0, which satisfies requirement hpo-toolkit==0.1.3.post0 from https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz 2023-03-10T16:03:02,653 Removed hpo-toolkit==0.1.3.post0 from https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz from build tracker '/tmp/pip-build-tracker-3sz7yybp' 2023-03-10T16:03:02,677 Created temporary directory: /tmp/pip-unpack-qn1vkm6d 2023-03-10T16:03:02,678 Building wheels for collected packages: hpo-toolkit 2023-03-10T16:03:02,688 Created temporary directory: /tmp/pip-wheel-8ezo16nu 2023-03-10T16:03:02,688 Destination directory: /tmp/pip-wheel-8ezo16nu 2023-03-10T16:03:02,693 Building wheel for hpo-toolkit (pyproject.toml): started 2023-03-10T16:03:02,695 Running command Building wheel for hpo-toolkit (pyproject.toml) 2023-03-10T16:03:03,869 No `packages` or `py_modules` configuration, performing automatic discovery. 2023-03-10T16:03:03,871 `src-layout` detected -- analysing ./src 2023-03-10T16:03:03,885 discovered packages -- ['hpotk', 'hpotk.ontology', 'hpotk.model', 'hpotk.algorithm', 'hpotk.constants', 'hpotk.graph', 'hpotk.annotations', 'hpotk.validate', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.graph.csr', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa'] 2023-03-10T16:03:03,885 discovered py_modules -- [] 2023-03-10T16:03:04,458 running bdist_wheel 2023-03-10T16:03:04,491 running build 2023-03-10T16:03:04,492 running build_py 2023-03-10T16:03:04,502 creating build 2023-03-10T16:03:04,503 creating build/lib 2023-03-10T16:03:04,504 creating build/lib/hpotk 2023-03-10T16:03:04,507 copying src/hpotk/util.py -> build/lib/hpotk 2023-03-10T16:03:04,511 copying src/hpotk/__init__.py -> build/lib/hpotk 2023-03-10T16:03:04,515 creating build/lib/hpotk/ontology 2023-03-10T16:03:04,517 copying src/hpotk/ontology/_default.py -> build/lib/hpotk/ontology 2023-03-10T16:03:04,522 copying src/hpotk/ontology/__init__.py -> build/lib/hpotk/ontology 2023-03-10T16:03:04,525 copying src/hpotk/ontology/_attrs.py -> build/lib/hpotk/ontology 2023-03-10T16:03:04,529 copying src/hpotk/ontology/_api.py -> build/lib/hpotk/ontology 2023-03-10T16:03:04,533 creating build/lib/hpotk/model 2023-03-10T16:03:04,535 copying src/hpotk/model/_base.py -> build/lib/hpotk/model 2023-03-10T16:03:04,539 copying src/hpotk/model/_term_id.py -> build/lib/hpotk/model 2023-03-10T16:03:04,542 copying src/hpotk/model/__init__.py -> build/lib/hpotk/model 2023-03-10T16:03:04,545 copying src/hpotk/model/_term.py -> build/lib/hpotk/model 2023-03-10T16:03:04,551 creating build/lib/hpotk/algorithm 2023-03-10T16:03:04,552 copying src/hpotk/algorithm/_traversal.py -> build/lib/hpotk/algorithm 2023-03-10T16:03:04,557 copying src/hpotk/algorithm/__init__.py -> build/lib/hpotk/algorithm 2023-03-10T16:03:04,562 creating build/lib/hpotk/constants 2023-03-10T16:03:04,563 copying src/hpotk/constants/__init__.py -> build/lib/hpotk/constants 2023-03-10T16:03:04,569 creating build/lib/hpotk/graph 2023-03-10T16:03:04,571 copying src/hpotk/graph/_csr_graph.py -> build/lib/hpotk/graph 2023-03-10T16:03:04,574 copying src/hpotk/graph/_factory.py -> build/lib/hpotk/graph 2023-03-10T16:03:04,578 copying src/hpotk/graph/__init__.py -> build/lib/hpotk/graph 2023-03-10T16:03:04,582 copying src/hpotk/graph/_api.py -> build/lib/hpotk/graph 2023-03-10T16:03:04,587 creating build/lib/hpotk/annotations 2023-03-10T16:03:04,588 copying src/hpotk/annotations/_base.py -> build/lib/hpotk/annotations 2023-03-10T16:03:04,593 copying src/hpotk/annotations/__init__.py -> build/lib/hpotk/annotations 2023-03-10T16:03:04,597 copying src/hpotk/annotations/_simple.py -> build/lib/hpotk/annotations 2023-03-10T16:03:04,602 creating build/lib/hpotk/validate 2023-03-10T16:03:04,603 copying src/hpotk/validate/_hpo.py -> build/lib/hpotk/validate 2023-03-10T16:03:04,608 copying src/hpotk/validate/__init__.py -> build/lib/hpotk/validate 2023-03-10T16:03:04,611 copying src/hpotk/validate/_model.py -> build/lib/hpotk/validate 2023-03-10T16:03:04,616 creating build/lib/hpotk/ontology/load 2023-03-10T16:03:04,618 copying src/hpotk/ontology/load/__init__.py -> build/lib/hpotk/ontology/load 2023-03-10T16:03:04,624 creating build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,625 copying src/hpotk/ontology/load/obographs/_factory.py -> build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,629 copying src/hpotk/ontology/load/obographs/__init__.py -> build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,633 copying src/hpotk/ontology/load/obographs/_load.py -> build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,637 copying src/hpotk/ontology/load/obographs/_model.py -> build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,642 copying src/hpotk/ontology/load/obographs/test_load.py -> build/lib/hpotk/ontology/load/obographs 2023-03-10T16:03:04,647 creating build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,649 copying src/hpotk/constants/hpo/severity.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,653 copying src/hpotk/constants/hpo/frequency.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,656 copying src/hpotk/constants/hpo/base.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,660 copying src/hpotk/constants/hpo/organ_system.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,663 copying src/hpotk/constants/hpo/__init__.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,667 copying src/hpotk/constants/hpo/onset.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,670 copying src/hpotk/constants/hpo/inheritance.py -> build/lib/hpotk/constants/hpo 2023-03-10T16:03:04,675 creating build/lib/hpotk/graph/csr 2023-03-10T16:03:04,677 copying src/hpotk/graph/csr/_csr.py -> build/lib/hpotk/graph/csr 2023-03-10T16:03:04,682 copying src/hpotk/graph/csr/test__csr.py -> build/lib/hpotk/graph/csr 2023-03-10T16:03:04,686 copying src/hpotk/graph/csr/__init__.py -> build/lib/hpotk/graph/csr 2023-03-10T16:03:04,691 creating build/lib/hpotk/annotations/load 2023-03-10T16:03:04,693 copying src/hpotk/annotations/load/__init__.py -> build/lib/hpotk/annotations/load 2023-03-10T16:03:04,696 copying src/hpotk/annotations/load/_api.py -> build/lib/hpotk/annotations/load 2023-03-10T16:03:04,701 creating build/lib/hpotk/annotations/load/hpoa 2023-03-10T16:03:04,703 copying src/hpotk/annotations/load/hpoa/_impl.py -> build/lib/hpotk/annotations/load/hpoa 2023-03-10T16:03:04,708 copying src/hpotk/annotations/load/hpoa/__init__.py -> build/lib/hpotk/annotations/load/hpoa 2023-03-10T16:03:04,712 running egg_info 2023-03-10T16:03:04,730 writing src/hpo_toolkit.egg-info/PKG-INFO 2023-03-10T16:03:04,738 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2023-03-10T16:03:04,741 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2023-03-10T16:03:04,743 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2023-03-10T16:03:04,778 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:03:04,785 adding license file 'LICENSE' 2023-03-10T16:03:04,796 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2023-03-10T16:03:04,842 installing to build/bdist.linux-armv7l/wheel 2023-03-10T16:03:04,842 running install 2023-03-10T16:03:04,903 running install_lib 2023-03-10T16:03:04,913 creating build/bdist.linux-armv7l 2023-03-10T16:03:04,914 creating build/bdist.linux-armv7l/wheel 2023-03-10T16:03:04,918 creating build/bdist.linux-armv7l/wheel/hpotk 2023-03-10T16:03:04,920 copying build/lib/hpotk/util.py -> build/bdist.linux-armv7l/wheel/hpotk 2023-03-10T16:03:04,926 creating build/bdist.linux-armv7l/wheel/hpotk/ontology 2023-03-10T16:03:04,929 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2023-03-10T16:03:04,933 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,935 copying build/lib/hpotk/ontology/load/obographs/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,940 copying build/lib/hpotk/ontology/load/obographs/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,944 copying build/lib/hpotk/ontology/load/obographs/_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,949 copying build/lib/hpotk/ontology/load/obographs/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,953 copying build/lib/hpotk/ontology/load/obographs/test_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2023-03-10T16:03:04,957 copying build/lib/hpotk/ontology/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2023-03-10T16:03:04,961 copying build/lib/hpotk/ontology/_default.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2023-03-10T16:03:04,965 copying build/lib/hpotk/ontology/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2023-03-10T16:03:04,968 copying build/lib/hpotk/ontology/_attrs.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2023-03-10T16:03:04,972 copying build/lib/hpotk/ontology/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2023-03-10T16:03:04,977 creating build/bdist.linux-armv7l/wheel/hpotk/model 2023-03-10T16:03:04,979 copying build/lib/hpotk/model/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2023-03-10T16:03:04,983 copying build/lib/hpotk/model/_term_id.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2023-03-10T16:03:04,987 copying build/lib/hpotk/model/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2023-03-10T16:03:04,990 copying build/lib/hpotk/model/_term.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2023-03-10T16:03:04,996 creating build/bdist.linux-armv7l/wheel/hpotk/algorithm 2023-03-10T16:03:04,998 copying build/lib/hpotk/algorithm/_traversal.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2023-03-10T16:03:05,003 copying build/lib/hpotk/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2023-03-10T16:03:05,007 creating build/bdist.linux-armv7l/wheel/hpotk/constants 2023-03-10T16:03:05,010 creating build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,012 copying build/lib/hpotk/constants/hpo/severity.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,016 copying build/lib/hpotk/constants/hpo/frequency.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,020 copying build/lib/hpotk/constants/hpo/base.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,023 copying build/lib/hpotk/constants/hpo/organ_system.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,027 copying build/lib/hpotk/constants/hpo/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,030 copying build/lib/hpotk/constants/hpo/onset.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,034 copying build/lib/hpotk/constants/hpo/inheritance.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2023-03-10T16:03:05,038 copying build/lib/hpotk/constants/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants 2023-03-10T16:03:05,043 creating build/bdist.linux-armv7l/wheel/hpotk/graph 2023-03-10T16:03:05,045 copying build/lib/hpotk/graph/_csr_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2023-03-10T16:03:05,050 creating build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2023-03-10T16:03:05,052 copying build/lib/hpotk/graph/csr/_csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2023-03-10T16:03:05,056 copying build/lib/hpotk/graph/csr/test__csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2023-03-10T16:03:05,061 copying build/lib/hpotk/graph/csr/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2023-03-10T16:03:05,064 copying build/lib/hpotk/graph/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2023-03-10T16:03:05,068 copying build/lib/hpotk/graph/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2023-03-10T16:03:05,072 copying build/lib/hpotk/graph/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2023-03-10T16:03:05,076 copying build/lib/hpotk/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk 2023-03-10T16:03:05,080 creating build/bdist.linux-armv7l/wheel/hpotk/annotations 2023-03-10T16:03:05,082 copying build/lib/hpotk/annotations/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2023-03-10T16:03:05,088 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2023-03-10T16:03:05,090 copying build/lib/hpotk/annotations/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2023-03-10T16:03:05,094 copying build/lib/hpotk/annotations/load/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2023-03-10T16:03:05,099 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2023-03-10T16:03:05,100 copying build/lib/hpotk/annotations/load/hpoa/_impl.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2023-03-10T16:03:05,105 copying build/lib/hpotk/annotations/load/hpoa/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2023-03-10T16:03:05,109 copying build/lib/hpotk/annotations/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2023-03-10T16:03:05,112 copying build/lib/hpotk/annotations/_simple.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2023-03-10T16:03:05,117 creating build/bdist.linux-armv7l/wheel/hpotk/validate 2023-03-10T16:03:05,119 copying build/lib/hpotk/validate/_hpo.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2023-03-10T16:03:05,123 copying build/lib/hpotk/validate/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2023-03-10T16:03:05,127 copying build/lib/hpotk/validate/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2023-03-10T16:03:05,130 running install_egg_info 2023-03-10T16:03:05,140 Copying src/hpo_toolkit.egg-info to build/bdist.linux-armv7l/wheel/hpo_toolkit-0.1.3.post0-py3.7.egg-info 2023-03-10T16:03:05,168 running install_scripts 2023-03-10T16:03:05,213 creating build/bdist.linux-armv7l/wheel/hpo_toolkit-0.1.3.post0.dist-info/WHEEL 2023-03-10T16:03:05,218 creating '/tmp/pip-wheel-8ezo16nu/.tmp-15f61eqn/hpo_toolkit-0.1.3.post0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-10T16:03:05,225 adding 'hpotk/__init__.py' 2023-03-10T16:03:05,229 adding 'hpotk/util.py' 2023-03-10T16:03:05,232 adding 'hpotk/algorithm/__init__.py' 2023-03-10T16:03:05,235 adding 'hpotk/algorithm/_traversal.py' 2023-03-10T16:03:05,239 adding 'hpotk/annotations/__init__.py' 2023-03-10T16:03:05,243 adding 'hpotk/annotations/_base.py' 2023-03-10T16:03:05,246 adding 'hpotk/annotations/_simple.py' 2023-03-10T16:03:05,250 adding 'hpotk/annotations/load/__init__.py' 2023-03-10T16:03:05,252 adding 'hpotk/annotations/load/_api.py' 2023-03-10T16:03:05,256 adding 'hpotk/annotations/load/hpoa/__init__.py' 2023-03-10T16:03:05,259 adding 'hpotk/annotations/load/hpoa/_impl.py' 2023-03-10T16:03:05,263 adding 'hpotk/constants/__init__.py' 2023-03-10T16:03:05,266 adding 'hpotk/constants/hpo/__init__.py' 2023-03-10T16:03:05,269 adding 'hpotk/constants/hpo/base.py' 2023-03-10T16:03:05,272 adding 'hpotk/constants/hpo/frequency.py' 2023-03-10T16:03:05,274 adding 'hpotk/constants/hpo/inheritance.py' 2023-03-10T16:03:05,277 adding 'hpotk/constants/hpo/onset.py' 2023-03-10T16:03:05,279 adding 'hpotk/constants/hpo/organ_system.py' 2023-03-10T16:03:05,282 adding 'hpotk/constants/hpo/severity.py' 2023-03-10T16:03:05,285 adding 'hpotk/graph/__init__.py' 2023-03-10T16:03:05,288 adding 'hpotk/graph/_api.py' 2023-03-10T16:03:05,291 adding 'hpotk/graph/_csr_graph.py' 2023-03-10T16:03:05,294 adding 'hpotk/graph/_factory.py' 2023-03-10T16:03:05,298 adding 'hpotk/graph/csr/__init__.py' 2023-03-10T16:03:05,301 adding 'hpotk/graph/csr/_csr.py' 2023-03-10T16:03:05,304 adding 'hpotk/graph/csr/test__csr.py' 2023-03-10T16:03:05,308 adding 'hpotk/model/__init__.py' 2023-03-10T16:03:05,310 adding 'hpotk/model/_base.py' 2023-03-10T16:03:05,313 adding 'hpotk/model/_term.py' 2023-03-10T16:03:05,316 adding 'hpotk/model/_term_id.py' 2023-03-10T16:03:05,320 adding 'hpotk/ontology/__init__.py' 2023-03-10T16:03:05,322 adding 'hpotk/ontology/_api.py' 2023-03-10T16:03:05,325 adding 'hpotk/ontology/_attrs.py' 2023-03-10T16:03:05,328 adding 'hpotk/ontology/_default.py' 2023-03-10T16:03:05,331 adding 'hpotk/ontology/load/__init__.py' 2023-03-10T16:03:05,335 adding 'hpotk/ontology/load/obographs/__init__.py' 2023-03-10T16:03:05,337 adding 'hpotk/ontology/load/obographs/_factory.py' 2023-03-10T16:03:05,341 adding 'hpotk/ontology/load/obographs/_load.py' 2023-03-10T16:03:05,345 adding 'hpotk/ontology/load/obographs/_model.py' 2023-03-10T16:03:05,347 adding 'hpotk/ontology/load/obographs/test_load.py' 2023-03-10T16:03:05,351 adding 'hpotk/validate/__init__.py' 2023-03-10T16:03:05,354 adding 'hpotk/validate/_hpo.py' 2023-03-10T16:03:05,356 adding 'hpotk/validate/_model.py' 2023-03-10T16:03:05,371 adding 'hpo_toolkit-0.1.3.post0.dist-info/LICENSE' 2023-03-10T16:03:05,388 adding 'hpo_toolkit-0.1.3.post0.dist-info/METADATA' 2023-03-10T16:03:05,391 adding 'hpo_toolkit-0.1.3.post0.dist-info/WHEEL' 2023-03-10T16:03:05,392 adding 'hpo_toolkit-0.1.3.post0.dist-info/top_level.txt' 2023-03-10T16:03:05,395 adding 'hpo_toolkit-0.1.3.post0.dist-info/RECORD' 2023-03-10T16:03:05,401 removing build/bdist.linux-armv7l/wheel 2023-03-10T16:03:05,438 /tmp/pip-build-env-y6l68m7e/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-03-10T16:03:05,439 warnings.warn(msg, _BetaConfiguration) 2023-03-10T16:03:05,612 Building wheel for hpo-toolkit (pyproject.toml): finished with status 'done' 2023-03-10T16:03:05,628 Created wheel for hpo-toolkit: filename=hpo_toolkit-0.1.3.post0-py3-none-any.whl size=62214 sha256=18ee8da29a052f43b699b468fd06b408f120009588fffbe58553bc4ba143c6a2 2023-03-10T16:03:05,630 Stored in directory: /tmp/pip-ephem-wheel-cache-fa7wwnex/wheels/1d/98/ab/c2d2ec1639410d0c9089545b073101aa32ae5fc8cfd58b8d51 2023-03-10T16:03:05,672 Successfully built hpo-toolkit 2023-03-10T16:03:05,683 Removed build tracker: '/tmp/pip-build-tracker-3sz7yybp'