2023-03-10T17:30:43,599 Created temporary directory: /tmp/pip-ephem-wheel-cache-90ppno4l
2023-03-10T17:30:43,604 Created temporary directory: /tmp/pip-build-tracker-jfk1khix
2023-03-10T17:30:43,605 Initialized build tracking at /tmp/pip-build-tracker-jfk1khix
2023-03-10T17:30:43,605 Created build tracker: /tmp/pip-build-tracker-jfk1khix
2023-03-10T17:30:43,606 Entered build tracker: /tmp/pip-build-tracker-jfk1khix
2023-03-10T17:30:43,607 Created temporary directory: /tmp/pip-wheel-teybjugv
2023-03-10T17:30:43,617 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-10T17:30:43,623 Created temporary directory: /tmp/pip-ephem-wheel-cache-qk7i0347
2023-03-10T17:30:43,677 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-10T17:30:43,683 2 location(s) to search for versions of gromacswrapper:
2023-03-10T17:30:43,683 * https://pypi.org/simple/gromacswrapper/
2023-03-10T17:30:43,683 * https://www.piwheels.org/simple/gromacswrapper/
2023-03-10T17:30:43,685 Fetching project page and analyzing links: https://pypi.org/simple/gromacswrapper/
2023-03-10T17:30:43,686 Getting page https://pypi.org/simple/gromacswrapper/
2023-03-10T17:30:43,690 Found index url https://pypi.org/simple
2023-03-10T17:30:43,919 Fetched page https://pypi.org/simple/gromacswrapper/ as application/vnd.pypi.simple.v1+json
2023-03-10T17:30:43,943   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/0f/f8/df1a8004045339699be417cf28d7e5665e6d7cf188d37302b1c84088ffae/GromacsWrapper-0.3.2-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,944   Found link https://files.pythonhosted.org/packages/1c/82/07f897423627742edc552e6510c3403d993dee6a16568b29bb57f560d74d/GromacsWrapper-0.3.2.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.3.2
2023-03-10T17:30:43,945   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/d1/6a/45248df62150c461d026222b1c6a8feee1254f8f542d44571ad0297a39b0/GromacsWrapper-0.3.3-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,945   Found link https://files.pythonhosted.org/packages/bf/93/c94529f7748235ead26e081b7ba8e2ff3713b4816210962f5a6805f4d199/GromacsWrapper-0.3.3.macosx-10.6-x86_64.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.3.3.macosx-10.6-x86_64
2023-03-10T17:30:43,946   Found link https://files.pythonhosted.org/packages/35/66/4c302aeef43e954027703aef79cc1b7e93d79e989d9d99d66eafa1341891/GromacsWrapper-0.3.3.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.3.3
2023-03-10T17:30:43,947   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/ff/f9/6bf4e0a4dae41c6a69bb316e8a522618f569e37b6ea1ef262ca11e9772f7/GromacsWrapper-0.4.0-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,947   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/64/c5/6f9c0596508628078b490f4aecef8d25ec7977f8315e720a46ebe4a72688/GromacsWrapper-0.4.0-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,948   Found link https://files.pythonhosted.org/packages/cd/99/ca570bede19f3a49c858a8ae94e947ba00bee60df552e765f11db69b42f9/GromacsWrapper-0.4.0.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.4.0
2023-03-10T17:30:43,949   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/a5/67/dec2dd69d69700289f12592961266c1a8a90eac4c091a961360a6cd55dc0/GromacsWrapper-0.5.0-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,949   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/48/04/c47c3b7ab4d8834c297ee4deabb5ab638884539fd46f23a581ffcebc1878/GromacsWrapper-0.5.0-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,950   Found link https://files.pythonhosted.org/packages/e4/6b/054d15e27a4ebe00534fef7e4319df3aa417aeef4d9d57ece2adede99df2/GromacsWrapper-0.5.0.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.5.0
2023-03-10T17:30:43,951   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/fe/c4/36e63d84bb3c68db615f7665a884563c454b4856fb1180e0774989a3aec5/GromacsWrapper-0.5.1-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,951   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f5/5b/804e8964272f2363876c893563e61a0ed3b3b3f6db929f3a96f9f0388221/GromacsWrapper-0.5.1-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,952   Found link https://files.pythonhosted.org/packages/b1/77/53fe38a44ca21fc0109a19e5ffee3f85db9307ae60bc51f619ebf22de70e/GromacsWrapper-0.5.1.macosx-10.11-x86_64.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.5.1.macosx-10.11-x86_64
2023-03-10T17:30:43,952   Found link https://files.pythonhosted.org/packages/35/d6/42ddf83fc37b799713172dcf513db4bbd73ecf045f057452928be246bc3e/GromacsWrapper-0.5.1.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.5.1
2023-03-10T17:30:43,953   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/f0/42/df783ba6989d3c4e4053f2dcb6244f508bdf9fc83a114fb7b1cae10afaed/GromacsWrapper-0.6.0-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,954   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/14/8d/fbc4c84e69dbbb4679255649796f69cc02a6be14111cf8bdc9596bbb040b/GromacsWrapper-0.6.0-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,954   Found link https://files.pythonhosted.org/packages/2e/3c/ac70551ec83243b7904ab9eecb6c1c723f0cb3aebdcf9e202657400ee822/GromacsWrapper-0.6.0.macosx-10.11-x86_64.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.6.0.macosx-10.11-x86_64
2023-03-10T17:30:43,955   Found link https://files.pythonhosted.org/packages/1d/9e/a17ddbb7b5eb3883c23aeffb908db75f3a53c5f23f75dbe436623c30a995/GromacsWrapper-0.6.0.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.6.0
2023-03-10T17:30:43,956   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/7d/89/1626beff2767aa84154d92cd9827a0c9facb796cfe570299015839e9b297/GromacsWrapper-0.6.1-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,956   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e0/78/d33323f7af1cec6bbec69beb2ade16dbf0acb092e418fbbc136b8239fe05/GromacsWrapper-0.6.1-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,957   Found link https://files.pythonhosted.org/packages/c3/a5/80e4e3514100be0781e2e5065bcf19089b7df8d0909c635d5c73402575d0/GromacsWrapper-0.6.1.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.6.1
2023-03-10T17:30:43,958   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/54/d2/86d38c5c5340d3e919a7a1c1fab1a9ceb32fb289177455a606e692a0c99c/GromacsWrapper-0.6.2-py2-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,958   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/22/98/a3eef95a73167ae53651d000c5c11b1460d1da857d87a8303a1b019606e1/GromacsWrapper-0.6.2-py2.7.egg (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,959   Found link https://files.pythonhosted.org/packages/3c/50/7956b36059ae8daeb6a38b503320c0cf79e66fbc917f1646e574daf7d5ab/GromacsWrapper-0.6.2.macosx-10.11-x86_64.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.6.2.macosx-10.11-x86_64
2023-03-10T17:30:43,960   Found link https://files.pythonhosted.org/packages/b4/6c/300d9aeac9ae5e6436850d6c9ac6fa542e664da389713946ec7dc6f8b53c/GromacsWrapper-0.6.2.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.6.2
2023-03-10T17:30:43,960   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/93/18/c51a38ca96686276b614e8251845e8c1921efe764efd98423ace710c7d7b/GromacsWrapper-0.7.0-py2.py3-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,961   Found link https://files.pythonhosted.org/packages/d9/f2/2f573b4e2f1d674a375bb39f23088fc1b0b90d2cd9a927b1320617a0f7bc/GromacsWrapper-0.7.0.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.7.0
2023-03-10T17:30:43,962   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/7b/a1/3f2240ace2d5ecbdf9a251fabc2f274c761522a549795ba03327d40c7a65/GromacsWrapper-0.8.0-py2.py3-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,962   Found link https://files.pythonhosted.org/packages/bf/40/9533380f268d0115da45ae2b140dda623e07764a12a9af44b25c4d32de01/GromacsWrapper-0.8.0.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.8.0
2023-03-10T17:30:43,963   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/e7/7b/e2a3990e329fa476b9142b156e5c8b8b9a4e57bb563b4ffc23d2de3a388c/GromacsWrapper-0.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,963   Found link https://files.pythonhosted.org/packages/69/97/166e4728582382278991024dae08670c1791984f1fcd7e43c8cc0fce1b06/GromacsWrapper-0.8.1.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.8.1
2023-03-10T17:30:43,964   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/32/aa/88b2f02902b62b21610e094f54ef18d9014db6b0b72dc84f78d5af6265b1/GromacsWrapper-0.8.2-py2.py3-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,965   Found link https://files.pythonhosted.org/packages/82/da/17cc4a3e750598b0dceb57202c5e69f5b5e06d9b9076c8a402e7e46b2183/GromacsWrapper-0.8.2.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.8.2
2023-03-10T17:30:43,965   Skipping link: No binaries permitted for gromacswrapper: https://files.pythonhosted.org/packages/07/8b/d299c81ca31a5bb50b7e9c3b606fbb2c5b63a41bdb0ff47af3c3d16858e1/GromacsWrapper-0.8.3-py2.py3-none-any.whl (from https://pypi.org/simple/gromacswrapper/)
2023-03-10T17:30:43,966   Found link https://files.pythonhosted.org/packages/21/6a/8f955c014c2412c26774be56a531aa578623094b09dc9e5e4cdc9270d1ef/GromacsWrapper-0.8.3.tar.gz (from https://pypi.org/simple/gromacswrapper/), version: 0.8.3
2023-03-10T17:30:43,967 Fetching project page and analyzing links: https://www.piwheels.org/simple/gromacswrapper/
2023-03-10T17:30:43,968 Getting page https://www.piwheels.org/simple/gromacswrapper/
2023-03-10T17:30:43,970 Found index url https://www.piwheels.org/simple
2023-03-10T17:30:44,196 Fetched page https://www.piwheels.org/simple/gromacswrapper/ as text/html
2023-03-10T17:30:44,203   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.8.2-py2.py3-none-any.whl#sha256=445a92617b4f7a9119390845d7a31d648db1d981a45051fbd92713cca00fb218 (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,203   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.8.1-py2.py3-none-any.whl#sha256=db1aae5344bc47c17e7ac5545b18bc9b1f5932239a30fb416ca3f6281ffba133 (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,204   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.8.0-py2.py3-none-any.whl#sha256=a5fdbcf494f9cf32cd89262341601100f3ad24f979849ba6cf30b153d68a8762 (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,204   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.7.0-py2.py3-none-any.whl#sha256=1c3913aa358b0a6b9327192c2d70fa76b3f8d3753ccc2475eccc4300c9e8c1fc (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,205   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.6.2-py3-none-any.whl#sha256=e43b405c7f7c663d37c6ae68e08f49ad4d23f1f8cbc5975b3c02bc1e2a5e3d8a (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,205   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.6.1-py3-none-any.whl#sha256=4a7a4d7bfd57a54a89765786ae4317fa8ac32e69a614d50780b6895a491c87de (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,206   Skipping link: No binaries permitted for gromacswrapper: https://www.piwheels.org/simple/gromacswrapper/GromacsWrapper-0.6.0-py3-none-any.whl#sha256=6a080436e3ea8ae130016d96a6865ee60220794b9bf670091839a4b6411ce8cb (from https://www.piwheels.org/simple/gromacswrapper/)
2023-03-10T17:30:44,206 Skipping link: not a file: https://www.piwheels.org/simple/gromacswrapper/
2023-03-10T17:30:44,207 Skipping link: not a file: https://pypi.org/simple/gromacswrapper/
2023-03-10T17:30:44,245 Given no hashes to check 1 links for project 'gromacswrapper': discarding no candidates
2023-03-10T17:30:44,276 Collecting gromacswrapper==0.8.3
2023-03-10T17:30:44,281   Created temporary directory: /tmp/pip-unpack-zop7j5gx
2023-03-10T17:30:44,666   Downloading GromacsWrapper-0.8.3.tar.gz (184 kB)
2023-03-10T17:30:45,042   Added gromacswrapper==0.8.3 from https://files.pythonhosted.org/packages/21/6a/8f955c014c2412c26774be56a531aa578623094b09dc9e5e4cdc9270d1ef/GromacsWrapper-0.8.3.tar.gz to build tracker '/tmp/pip-build-tracker-jfk1khix'
2023-03-10T17:30:45,045   Running setup.py (path:/tmp/pip-wheel-teybjugv/gromacswrapper_3b5ac168947c4df7898b96d5eb00d33f/setup.py) egg_info for package gromacswrapper
2023-03-10T17:30:45,046   Created temporary directory: /tmp/pip-pip-egg-info-l7zbpgbr
2023-03-10T17:30:45,047   Preparing metadata (setup.py): started
2023-03-10T17:30:45,049   Running command python setup.py egg_info
2023-03-10T17:30:46,639   running egg_info
2023-03-10T17:30:46,642   creating /tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info
2023-03-10T17:30:46,700   writing /tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/PKG-INFO
2023-03-10T17:30:46,706   writing dependency_links to /tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/dependency_links.txt
2023-03-10T17:30:46,711   writing requirements to /tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/requires.txt
2023-03-10T17:30:46,713   writing top-level names to /tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/top_level.txt
2023-03-10T17:30:46,716   writing manifest file '/tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/SOURCES.txt'
2023-03-10T17:30:46,917   reading manifest file '/tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/SOURCES.txt'
2023-03-10T17:30:46,921   reading manifest template 'MANIFEST.in'
2023-03-10T17:30:46,930   adding license file 'COPYING'
2023-03-10T17:30:46,931   adding license file 'AUTHORS'
2023-03-10T17:30:46,939   writing manifest file '/tmp/pip-pip-egg-info-l7zbpgbr/GromacsWrapper.egg-info/SOURCES.txt'
2023-03-10T17:30:47,059   Preparing metadata (setup.py): finished with status 'done'
2023-03-10T17:30:47,074   Source in /tmp/pip-wheel-teybjugv/gromacswrapper_3b5ac168947c4df7898b96d5eb00d33f has version 0.8.3, which satisfies requirement gromacswrapper==0.8.3 from https://files.pythonhosted.org/packages/21/6a/8f955c014c2412c26774be56a531aa578623094b09dc9e5e4cdc9270d1ef/GromacsWrapper-0.8.3.tar.gz
2023-03-10T17:30:47,076   Removed gromacswrapper==0.8.3 from https://files.pythonhosted.org/packages/21/6a/8f955c014c2412c26774be56a531aa578623094b09dc9e5e4cdc9270d1ef/GromacsWrapper-0.8.3.tar.gz from build tracker '/tmp/pip-build-tracker-jfk1khix'
2023-03-10T17:30:47,088 Created temporary directory: /tmp/pip-unpack-25ciq4sx
2023-03-10T17:30:47,089 Building wheels for collected packages: gromacswrapper
2023-03-10T17:30:47,098   Created temporary directory: /tmp/pip-wheel-gh1oaz_y
2023-03-10T17:30:47,099   Building wheel for gromacswrapper (setup.py): started
2023-03-10T17:30:47,101   Destination directory: /tmp/pip-wheel-gh1oaz_y
2023-03-10T17:30:47,102   Running command python setup.py bdist_wheel
2023-03-10T17:30:49,169   running bdist_wheel
2023-03-10T17:30:49,352   running build
2023-03-10T17:30:49,352   running build_py
2023-03-10T17:30:49,367   creating build
2023-03-10T17:30:49,367   creating build/lib
2023-03-10T17:30:49,369   creating build/lib/gromacs
2023-03-10T17:30:49,371   copying gromacs/scaling.py -> build/lib/gromacs
2023-03-10T17:30:49,377   copying gromacs/qsub.py -> build/lib/gromacs
2023-03-10T17:30:49,382   copying gromacs/__init__.py -> build/lib/gromacs
2023-03-10T17:30:49,387   copying gromacs/tools.py -> build/lib/gromacs
2023-03-10T17:30:49,392   copying gromacs/utilities.py -> build/lib/gromacs
2023-03-10T17:30:49,398   copying gromacs/core.py -> build/lib/gromacs
2023-03-10T17:30:49,404   copying gromacs/run.py -> build/lib/gromacs
2023-03-10T17:30:49,409   copying gromacs/config.py -> build/lib/gromacs
2023-03-10T17:30:49,415   copying gromacs/cbook.py -> build/lib/gromacs
2023-03-10T17:30:49,424   copying gromacs/collections.py -> build/lib/gromacs
2023-03-10T17:30:49,428   copying gromacs/setup.py -> build/lib/gromacs
2023-03-10T17:30:49,435   copying gromacs/environment.py -> build/lib/gromacs
2023-03-10T17:30:49,439   copying gromacs/log.py -> build/lib/gromacs
2023-03-10T17:30:49,442   copying gromacs/_version.py -> build/lib/gromacs
2023-03-10T17:30:49,446   copying gromacs/exceptions.py -> build/lib/gromacs
2023-03-10T17:30:49,449   copying gromacs/formats.py -> build/lib/gromacs
2023-03-10T17:30:49,455   creating build/lib/gromacs/fileformats
2023-03-10T17:30:49,456   copying gromacs/fileformats/ndx.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,461   copying gromacs/fileformats/__init__.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,464   copying gromacs/fileformats/blocks.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,470   copying gromacs/fileformats/mdp.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,474   copying gromacs/fileformats/convert.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,478   copying gromacs/fileformats/xvg.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,485   copying gromacs/fileformats/xpm.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,489   copying gromacs/fileformats/top.py -> build/lib/gromacs/fileformats
2023-03-10T17:30:49,507   creating build/lib/gromacs/templates
2023-03-10T17:30:49,508   copying gromacs/templates/local.sh -> build/lib/gromacs/templates
2023-03-10T17:30:49,512   copying gromacs/templates/darwin.sh -> build/lib/gromacs/templates
2023-03-10T17:30:49,516   copying gromacs/templates/md_OPLSAA_gpu.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,520   copying gromacs/templates/md_CHARMM27.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,524   copying gromacs/templates/em.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,528   copying gromacs/templates/md_CHARMM27_gpu.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,533   copying gromacs/templates/md_G43a1.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,537   copying gromacs/templates/md_OPLSAA.mdp -> build/lib/gromacs/templates
2023-03-10T17:30:49,541   copying gromacs/templates/gromacswrapper_465.cfg -> build/lib/gromacs/templates
2023-03-10T17:30:49,545   copying gromacs/templates/gromacswrapper.cfg -> build/lib/gromacs/templates
2023-03-10T17:30:49,553   UPDATING build/lib/gromacs/_version.py
2023-03-10T17:30:49,555   set build/lib/gromacs/_version.py to '0.8.3'
2023-03-10T17:30:49,555   running build_scripts
2023-03-10T17:30:49,556   creating build/scripts-3.7
2023-03-10T17:30:49,559   copying and adjusting scripts/gw-join_parts.py -> build/scripts-3.7
2023-03-10T17:30:49,562   copying and adjusting scripts/gw-merge_topologies.py -> build/scripts-3.7
2023-03-10T17:30:49,567   copying scripts/gw-forcefield.py -> build/scripts-3.7
2023-03-10T17:30:49,572   copying scripts/gw-partial_tempering.py -> build/scripts-3.7
2023-03-10T17:30:49,575   changing mode of build/scripts-3.7/gw-join_parts.py from 644 to 755
2023-03-10T17:30:49,575   changing mode of build/scripts-3.7/gw-merge_topologies.py from 644 to 755
2023-03-10T17:30:49,643   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-03-10T17:30:49,644     setuptools.SetuptoolsDeprecationWarning,
2023-03-10T17:30:49,703   installing to build/bdist.linux-armv7l/wheel
2023-03-10T17:30:49,703   running install
2023-03-10T17:30:49,762   running install_lib
2023-03-10T17:30:49,825   creating build/bdist.linux-armv7l
2023-03-10T17:30:49,825   creating build/bdist.linux-armv7l/wheel
2023-03-10T17:30:49,829   creating build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,831   copying build/lib/gromacs/scaling.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,837   copying build/lib/gromacs/qsub.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,842   copying build/lib/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,847   copying build/lib/gromacs/tools.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,853   copying build/lib/gromacs/utilities.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,859   copying build/lib/gromacs/core.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,865   copying build/lib/gromacs/run.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,871   copying build/lib/gromacs/config.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,877   copying build/lib/gromacs/cbook.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,887   copying build/lib/gromacs/collections.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,892   copying build/lib/gromacs/setup.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,898   copying build/lib/gromacs/environment.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,902   copying build/lib/gromacs/log.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,906   copying build/lib/gromacs/_version.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,911   creating build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,913   copying build/lib/gromacs/fileformats/ndx.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,917   copying build/lib/gromacs/fileformats/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,921   copying build/lib/gromacs/fileformats/blocks.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,926   copying build/lib/gromacs/fileformats/mdp.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,930   copying build/lib/gromacs/fileformats/convert.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,935   copying build/lib/gromacs/fileformats/xvg.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,941   copying build/lib/gromacs/fileformats/xpm.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,946   copying build/lib/gromacs/fileformats/top.py -> build/bdist.linux-armv7l/wheel/gromacs/fileformats
2023-03-10T17:30:49,953   copying build/lib/gromacs/exceptions.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,957   creating build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,959   copying build/lib/gromacs/templates/md_OPLSAA_gpu.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,963   copying build/lib/gromacs/templates/md_CHARMM27.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,967   copying build/lib/gromacs/templates/em.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,971   copying build/lib/gromacs/templates/md_CHARMM27_gpu.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,975   copying build/lib/gromacs/templates/md_G43a1.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,978   copying build/lib/gromacs/templates/gromacswrapper_465.cfg -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,982   copying build/lib/gromacs/templates/local.sh -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,985   copying build/lib/gromacs/templates/md_OPLSAA.mdp -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,989   copying build/lib/gromacs/templates/gromacswrapper.cfg -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,992   copying build/lib/gromacs/templates/darwin.sh -> build/bdist.linux-armv7l/wheel/gromacs/templates
2023-03-10T17:30:49,996   copying build/lib/gromacs/formats.py -> build/bdist.linux-armv7l/wheel/gromacs
2023-03-10T17:30:49,999   running install_egg_info
2023-03-10T17:30:50,138   running egg_info
2023-03-10T17:30:50,195   writing GromacsWrapper.egg-info/PKG-INFO
2023-03-10T17:30:50,199   writing dependency_links to GromacsWrapper.egg-info/dependency_links.txt
2023-03-10T17:30:50,203   writing requirements to GromacsWrapper.egg-info/requires.txt
2023-03-10T17:30:50,205   writing top-level names to GromacsWrapper.egg-info/top_level.txt
2023-03-10T17:30:50,278   reading manifest file 'GromacsWrapper.egg-info/SOURCES.txt'
2023-03-10T17:30:50,288   reading manifest template 'MANIFEST.in'
2023-03-10T17:30:50,297   adding license file 'COPYING'
2023-03-10T17:30:50,297   adding license file 'AUTHORS'
2023-03-10T17:30:50,308   writing manifest file 'GromacsWrapper.egg-info/SOURCES.txt'
2023-03-10T17:30:50,311   Copying GromacsWrapper.egg-info to build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3-py3.7.egg-info
2023-03-10T17:30:50,334   running install_scripts
2023-03-10T17:30:50,337   creating build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data
2023-03-10T17:30:50,337   creating build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts
2023-03-10T17:30:50,339   copying build/scripts-3.7/gw-forcefield.py -> build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts
2023-03-10T17:30:50,344   copying build/scripts-3.7/gw-merge_topologies.py -> build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts
2023-03-10T17:30:50,348   copying build/scripts-3.7/gw-partial_tempering.py -> build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts
2023-03-10T17:30:50,352   copying build/scripts-3.7/gw-join_parts.py -> build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts
2023-03-10T17:30:50,355   changing mode of build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts/gw-forcefield.py to 755
2023-03-10T17:30:50,355   changing mode of build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts/gw-merge_topologies.py to 755
2023-03-10T17:30:50,356   changing mode of build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts/gw-partial_tempering.py to 755
2023-03-10T17:30:50,357   changing mode of build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.data/scripts/gw-join_parts.py to 755
2023-03-10T17:30:50,401   adding license file "COPYING" (matched pattern "COPYING*")
2023-03-10T17:30:50,402   adding license file "AUTHORS" (matched pattern "AUTHORS*")
2023-03-10T17:30:50,414   creating build/bdist.linux-armv7l/wheel/GromacsWrapper-0.8.3.dist-info/WHEEL
2023-03-10T17:30:50,419   creating '/tmp/pip-wheel-gh1oaz_y/GromacsWrapper-0.8.3-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-03-10T17:30:50,425   adding 'GromacsWrapper-0.8.3.data/scripts/gw-forcefield.py'
2023-03-10T17:30:50,428   adding 'GromacsWrapper-0.8.3.data/scripts/gw-join_parts.py'
2023-03-10T17:30:50,431   adding 'GromacsWrapper-0.8.3.data/scripts/gw-merge_topologies.py'
2023-03-10T17:30:50,434   adding 'GromacsWrapper-0.8.3.data/scripts/gw-partial_tempering.py'
2023-03-10T17:30:50,443   adding 'gromacs/__init__.py'
2023-03-10T17:30:50,446   adding 'gromacs/_version.py'
2023-03-10T17:30:50,477   adding 'gromacs/cbook.py'
2023-03-10T17:30:50,482   adding 'gromacs/collections.py'
2023-03-10T17:30:50,492   adding 'gromacs/config.py'
2023-03-10T17:30:50,502   adding 'gromacs/core.py'
2023-03-10T17:30:50,507   adding 'gromacs/environment.py'
2023-03-10T17:30:50,510   adding 'gromacs/exceptions.py'
2023-03-10T17:30:50,512   adding 'gromacs/formats.py'
2023-03-10T17:30:50,515   adding 'gromacs/log.py'
2023-03-10T17:30:50,522   adding 'gromacs/qsub.py'
2023-03-10T17:30:50,528   adding 'gromacs/run.py'
2023-03-10T17:30:50,532   adding 'gromacs/scaling.py'
2023-03-10T17:30:50,547   adding 'gromacs/setup.py'
2023-03-10T17:30:50,554   adding 'gromacs/tools.py'
2023-03-10T17:30:50,563   adding 'gromacs/utilities.py'
2023-03-10T17:30:50,568   adding 'gromacs/fileformats/__init__.py'
2023-03-10T17:30:50,573   adding 'gromacs/fileformats/blocks.py'
2023-03-10T17:30:50,577   adding 'gromacs/fileformats/convert.py'
2023-03-10T17:30:50,581   adding 'gromacs/fileformats/mdp.py'
2023-03-10T17:30:50,585   adding 'gromacs/fileformats/ndx.py'
2023-03-10T17:30:50,596   adding 'gromacs/fileformats/top.py'
2023-03-10T17:30:50,602   adding 'gromacs/fileformats/xpm.py'
2023-03-10T17:30:50,617   adding 'gromacs/fileformats/xvg.py'
2023-03-10T17:30:50,622   adding 'gromacs/templates/darwin.sh'
2023-03-10T17:30:50,625   adding 'gromacs/templates/em.mdp'
2023-03-10T17:30:50,627   adding 'gromacs/templates/gromacswrapper.cfg'
2023-03-10T17:30:50,630   adding 'gromacs/templates/gromacswrapper_465.cfg'
2023-03-10T17:30:50,632   adding 'gromacs/templates/local.sh'
2023-03-10T17:30:50,636   adding 'gromacs/templates/md_CHARMM27.mdp'
2023-03-10T17:30:50,639   adding 'gromacs/templates/md_CHARMM27_gpu.mdp'
2023-03-10T17:30:50,641   adding 'gromacs/templates/md_G43a1.mdp'
2023-03-10T17:30:50,644   adding 'gromacs/templates/md_OPLSAA.mdp'
2023-03-10T17:30:50,647   adding 'gromacs/templates/md_OPLSAA_gpu.mdp'
2023-03-10T17:30:50,650   adding 'GromacsWrapper-0.8.3.dist-info/AUTHORS'
2023-03-10T17:30:50,664   adding 'GromacsWrapper-0.8.3.dist-info/COPYING'
2023-03-10T17:30:50,668   adding 'GromacsWrapper-0.8.3.dist-info/METADATA'
2023-03-10T17:30:50,670   adding 'GromacsWrapper-0.8.3.dist-info/WHEEL'
2023-03-10T17:30:50,672   adding 'GromacsWrapper-0.8.3.dist-info/top_level.txt'
2023-03-10T17:30:50,674   adding 'GromacsWrapper-0.8.3.dist-info/zip-safe'
2023-03-10T17:30:50,676   adding 'GromacsWrapper-0.8.3.dist-info/RECORD'
2023-03-10T17:30:50,686   removing build/bdist.linux-armv7l/wheel
2023-03-10T17:30:50,855   Building wheel for gromacswrapper (setup.py): finished with status 'done'
2023-03-10T17:30:50,867   Created wheel for gromacswrapper: filename=GromacsWrapper-0.8.3-py2.py3-none-any.whl size=177805 sha256=11ebc72027f949fd4c6c58d9f5e5ee705c2a26c4b55dd7159daacec2a12bad5d
2023-03-10T17:30:50,870   Stored in directory: /tmp/pip-ephem-wheel-cache-qk7i0347/wheels/40/67/9e/06244e65f327de8eb233192d4e06b4ca7ed780be72b88ff8d7
2023-03-10T17:30:50,903 Successfully built gromacswrapper
2023-03-10T17:30:50,925 Removed build tracker: '/tmp/pip-build-tracker-jfk1khix'