2023-03-13T13:21:34,397 Created temporary directory: /tmp/pip-ephem-wheel-cache-ghrq47k9 2023-03-13T13:21:34,403 Created temporary directory: /tmp/pip-build-tracker-pkr9k09d 2023-03-13T13:21:34,403 Initialized build tracking at /tmp/pip-build-tracker-pkr9k09d 2023-03-13T13:21:34,404 Created build tracker: /tmp/pip-build-tracker-pkr9k09d 2023-03-13T13:21:34,404 Entered build tracker: /tmp/pip-build-tracker-pkr9k09d 2023-03-13T13:21:34,405 Created temporary directory: /tmp/pip-wheel-8v6xo81f 2023-03-13T13:21:34,416 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-13T13:21:34,422 Created temporary directory: /tmp/pip-ephem-wheel-cache-7m16t7zh 2023-03-13T13:21:34,476 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-13T13:21:34,483 2 location(s) to search for versions of bcbio-gff: 2023-03-13T13:21:34,483 * https://pypi.org/simple/bcbio-gff/ 2023-03-13T13:21:34,483 * https://www.piwheels.org/simple/bcbio-gff/ 2023-03-13T13:21:34,484 Fetching project page and analyzing links: https://pypi.org/simple/bcbio-gff/ 2023-03-13T13:21:34,485 Getting page https://pypi.org/simple/bcbio-gff/ 2023-03-13T13:21:34,489 Found index url https://pypi.org/simple 2023-03-13T13:21:34,671 Fetched page https://pypi.org/simple/bcbio-gff/ as application/vnd.pypi.simple.v1+json 2023-03-13T13:21:34,680 Found link https://files.pythonhosted.org/packages/0f/7b/508eb12b3d2ee89aed1da5daccfc6af4cc68774492ae744f3bf79fa1d394/bcbio-gff-0.2.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.2 2023-03-13T13:21:34,680 Found link https://files.pythonhosted.org/packages/b3/55/c5f2382bc610e4d5356a70e607db9c181e7c8d0d74b8bde4dd4ff7aaac0b/bcbio-gff-0.3.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.3 2023-03-13T13:21:34,681 Found link https://files.pythonhosted.org/packages/0f/25/58df1c623fbb9082e7cc76120cee5f34c679c93703d6e098b0587de5a983/bcbio-gff-0.4.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.4 2023-03-13T13:21:34,682 Found link https://files.pythonhosted.org/packages/05/a2/4d1bc8a54a930de08a9c80c5748f9cc2dde7a9c9608deb2c0e965794e5c9/bcbio-gff-0.5.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.5 2023-03-13T13:21:34,683 Found link https://files.pythonhosted.org/packages/e8/0d/b500bb14bb8c89cd38eebf2c6b63664f69b2e5decc5a66443b6b2d01110f/bcbio-gff-0.6.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6 2023-03-13T13:21:34,683 Found link https://files.pythonhosted.org/packages/26/ff/e3f26bad87926bd397173ddafed4b0a6e30394ed7d1717879bdc19142ceb/bcbio-gff-0.6.1.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.1 2023-03-13T13:21:34,684 Found link https://files.pythonhosted.org/packages/d2/02/722db105394093e107c6d4aeb7b8526909a2580b984e9b4f90202e9db1ab/bcbio-gff-0.6.2.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.2 2023-03-13T13:21:34,685 Found link https://files.pythonhosted.org/packages/94/df/e2d75cc688ac6eb53f5fb4e2cffd240596bbcd5be28bab8d4f6404a6f86c/bcbio-gff-0.6.4.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.4 2023-03-13T13:21:34,685 Found link https://files.pythonhosted.org/packages/58/b3/4d2a1c146a9cdb2e5a0c80ae8a39cd1fc2daf4b990084f4cc1fe084d518d/bcbio-gff-0.6.5.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.5 2023-03-13T13:21:34,686 Found link https://files.pythonhosted.org/packages/ba/93/34156e0ed3eff9dbd52035f53a48b2ff7ae6bd877cda23ea9fce26cac9fc/bcbio-gff-0.6.6.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.6 2023-03-13T13:21:34,687 Found link https://files.pythonhosted.org/packages/36/ea/43b0b78123aa89b352c401339be0a560c46f3d11b42ad3156a927761037d/bcbio-gff-0.6.7.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.7 2023-03-13T13:21:34,688 Found link https://files.pythonhosted.org/packages/ff/84/7b5fd81fab0ce826c048bea363d2e27179031bbfb8c289e9924ecb639f96/bcbio-gff-0.6.8.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.8 2023-03-13T13:21:34,688 Found link https://files.pythonhosted.org/packages/cd/de/13a70a7a158fc9d61ea18b9dadd2ef07584c44a912708b6d29de0185fc1d/bcbio-gff-0.6.9.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.6.9 2023-03-13T13:21:34,689 Found link https://files.pythonhosted.org/packages/41/b0/e6a00273dd38694c585237d7644dc92bee69e8a023abde8658f9faf0b5b0/bcbio-gff-0.7.0.tar.gz (from https://pypi.org/simple/bcbio-gff/), version: 0.7.0 2023-03-13T13:21:34,690 Skipping link: No binaries permitted for bcbio-gff: https://files.pythonhosted.org/packages/65/ca/a662629e1b030af679d228aed5c813f0a8ceedec69f30885f1ec5571ea8a/bcbio_gff-0.7.0-py3-none-any.whl (from https://pypi.org/simple/bcbio-gff/) 2023-03-13T13:21:34,691 Fetching project page and analyzing links: https://www.piwheels.org/simple/bcbio-gff/ 2023-03-13T13:21:34,691 Getting page https://www.piwheels.org/simple/bcbio-gff/ 2023-03-13T13:21:34,693 Found index url https://www.piwheels.org/simple 2023-03-13T13:21:34,924 Fetched page https://www.piwheels.org/simple/bcbio-gff/ as text/html 2023-03-13T13:21:34,935 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.9-py3-none-any.whl#sha256=28d283f764df2bcd245795f560b0b5911c398e41c706d5d1c6160e7fb5a693a4 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,936 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.8-py3-none-any.whl#sha256=60d3a3f0c0ef57d14de440969f381d9b279a3b6f40474e78bb807c1b3e0da6e2 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,937 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.7-py3-none-any.whl#sha256=3bf61b615bc27683f6e822fe2d56b9fb6785b2704fc416081ecd7e5eb36f4e62 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,937 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.6-py3-none-any.whl#sha256=fed4e11dc189716661bd3953c6830f5c5688d008270ddc799b1af74d5410f954 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,938 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.5-py3-none-any.whl#sha256=f3e2b0fb48ae692b5036735749852c53875b4abe9855824ccf5e86c7857f355b (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,938 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.4-py3-none-any.whl#sha256=f7fff5ea6cacce98b07767e8781979d74c0621d9cbdbca8254cad00a8c72071f (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,939 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.2-py3-none-any.whl#sha256=b3d402fa8f0151e47bcae8302ef07ce311fb1c1dc62ae8016f295624984edc63 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,939 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6.1-py3-none-any.whl#sha256=8cd45e5fbbf3bff14daa227b3a1fe86ebd1c5f7ff7542400ac9c426b01b145f4 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,940 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.6-py3-none-any.whl#sha256=9042a9615f9acc2dba5010f43bc8ea8913db3525bd597feaf5f36a50ee1a62b3 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,940 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.5-py3-none-any.whl#sha256=f19c6bf7223ccfdba69a5b19bd352224a14ba56f088c026bd210e0911f245a39 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,941 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.4-py3-none-any.whl#sha256=774c81b9acbf242e42b1dd809f154efeb177930fa5458785c68eee1dca065018 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,941 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.3-py3-none-any.whl#sha256=9beae40dd3eaf73b8691c6235b718792fa4292e499ea80797fec58075af0a889 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,942 Skipping link: No binaries permitted for bcbio-gff: https://www.piwheels.org/simple/bcbio-gff/bcbio_gff-0.2-py3-none-any.whl#sha256=bce47eae598edb3d56a44b017370befb7b1234b1491b88f04087fb146d642e83 (from https://www.piwheels.org/simple/bcbio-gff/) 2023-03-13T13:21:34,942 Skipping link: not a file: https://www.piwheels.org/simple/bcbio-gff/ 2023-03-13T13:21:34,943 Skipping link: not a file: https://pypi.org/simple/bcbio-gff/ 2023-03-13T13:21:34,993 Given no hashes to check 1 links for project 'bcbio-gff': discarding no candidates 2023-03-13T13:21:35,024 Collecting bcbio-gff==0.7.0 2023-03-13T13:21:35,028 Created temporary directory: /tmp/pip-unpack-p1ivu5lg 2023-03-13T13:21:35,257 Downloading bcbio-gff-0.7.0.tar.gz (20 kB) 2023-03-13T13:21:35,358 Added bcbio-gff==0.7.0 from https://files.pythonhosted.org/packages/41/b0/e6a00273dd38694c585237d7644dc92bee69e8a023abde8658f9faf0b5b0/bcbio-gff-0.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-pkr9k09d' 2023-03-13T13:21:35,360 Running setup.py (path:/tmp/pip-wheel-8v6xo81f/bcbio-gff_b23e551d9b9f4bc9ade3c414f7c3ad87/setup.py) egg_info for package bcbio-gff 2023-03-13T13:21:35,362 Created temporary directory: /tmp/pip-pip-egg-info-psxiwtl8 2023-03-13T13:21:35,362 Preparing metadata (setup.py): started 2023-03-13T13:21:35,364 Running command python setup.py egg_info 2023-03-13T13:21:37,444 running egg_info 2023-03-13T13:21:37,447 creating /tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info 2023-03-13T13:21:37,512 writing /tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/PKG-INFO 2023-03-13T13:21:37,516 writing dependency_links to /tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/dependency_links.txt 2023-03-13T13:21:37,520 writing requirements to /tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/requires.txt 2023-03-13T13:21:37,522 writing top-level names to /tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/top_level.txt 2023-03-13T13:21:37,525 writing manifest file '/tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/SOURCES.txt' 2023-03-13T13:21:37,732 reading manifest file '/tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/SOURCES.txt' 2023-03-13T13:21:37,735 reading manifest template 'MANIFEST.in' 2023-03-13T13:21:37,745 adding license file 'LICENSE' 2023-03-13T13:21:37,750 writing manifest file '/tmp/pip-pip-egg-info-psxiwtl8/bcbio_gff.egg-info/SOURCES.txt' 2023-03-13T13:21:37,889 Preparing metadata (setup.py): finished with status 'done' 2023-03-13T13:21:37,901 Source in /tmp/pip-wheel-8v6xo81f/bcbio-gff_b23e551d9b9f4bc9ade3c414f7c3ad87 has version 0.7.0, which satisfies requirement bcbio-gff==0.7.0 from https://files.pythonhosted.org/packages/41/b0/e6a00273dd38694c585237d7644dc92bee69e8a023abde8658f9faf0b5b0/bcbio-gff-0.7.0.tar.gz 2023-03-13T13:21:37,903 Removed bcbio-gff==0.7.0 from https://files.pythonhosted.org/packages/41/b0/e6a00273dd38694c585237d7644dc92bee69e8a023abde8658f9faf0b5b0/bcbio-gff-0.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-pkr9k09d' 2023-03-13T13:21:37,913 Created temporary directory: /tmp/pip-unpack-1sf8i9vj 2023-03-13T13:21:37,914 Building wheels for collected packages: bcbio-gff 2023-03-13T13:21:37,923 Created temporary directory: /tmp/pip-wheel-ioww_lsk 2023-03-13T13:21:37,924 Building wheel for bcbio-gff (setup.py): started 2023-03-13T13:21:37,926 Destination directory: /tmp/pip-wheel-ioww_lsk 2023-03-13T13:21:37,927 Running command python setup.py bdist_wheel 2023-03-13T13:21:40,072 running bdist_wheel 2023-03-13T13:21:40,826 running build 2023-03-13T13:21:40,827 running build_py 2023-03-13T13:21:40,917 creating build 2023-03-13T13:21:40,918 creating build/lib 2023-03-13T13:21:40,920 creating build/lib/BCBio 2023-03-13T13:21:40,922 copying BCBio/__init__.py -> build/lib/BCBio 2023-03-13T13:21:40,927 creating build/lib/BCBio/GFF 2023-03-13T13:21:40,929 copying BCBio/GFF/GFFOutput.py -> build/lib/BCBio/GFF 2023-03-13T13:21:40,933 copying BCBio/GFF/__init__.py -> build/lib/BCBio/GFF 2023-03-13T13:21:40,937 copying BCBio/GFF/_utils.py -> build/lib/BCBio/GFF 2023-03-13T13:21:40,941 copying BCBio/GFF/GFFParser.py -> build/lib/BCBio/GFF 2023-03-13T13:21:41,022 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-13T13:21:41,023 setuptools.SetuptoolsDeprecationWarning, 2023-03-13T13:21:41,089 installing to build/bdist.linux-armv7l/wheel 2023-03-13T13:21:41,089 running install 2023-03-13T13:21:41,149 running install_lib 2023-03-13T13:21:41,225 creating build/bdist.linux-armv7l 2023-03-13T13:21:41,227 creating build/bdist.linux-armv7l/wheel 2023-03-13T13:21:41,232 creating build/bdist.linux-armv7l/wheel/BCBio 2023-03-13T13:21:41,234 copying build/lib/BCBio/__init__.py -> build/bdist.linux-armv7l/wheel/BCBio 2023-03-13T13:21:41,239 creating build/bdist.linux-armv7l/wheel/BCBio/GFF 2023-03-13T13:21:41,241 copying build/lib/BCBio/GFF/GFFOutput.py -> build/bdist.linux-armv7l/wheel/BCBio/GFF 2023-03-13T13:21:41,246 copying build/lib/BCBio/GFF/__init__.py -> build/bdist.linux-armv7l/wheel/BCBio/GFF 2023-03-13T13:21:41,249 copying build/lib/BCBio/GFF/_utils.py -> build/bdist.linux-armv7l/wheel/BCBio/GFF 2023-03-13T13:21:41,253 copying build/lib/BCBio/GFF/GFFParser.py -> build/bdist.linux-armv7l/wheel/BCBio/GFF 2023-03-13T13:21:41,259 running install_egg_info 2023-03-13T13:21:41,419 running egg_info 2023-03-13T13:21:41,483 writing bcbio_gff.egg-info/PKG-INFO 2023-03-13T13:21:41,487 writing dependency_links to bcbio_gff.egg-info/dependency_links.txt 2023-03-13T13:21:41,491 writing requirements to bcbio_gff.egg-info/requires.txt 2023-03-13T13:21:41,493 writing top-level names to bcbio_gff.egg-info/top_level.txt 2023-03-13T13:21:41,565 reading manifest file 'bcbio_gff.egg-info/SOURCES.txt' 2023-03-13T13:21:41,570 reading manifest template 'MANIFEST.in' 2023-03-13T13:21:41,579 adding license file 'LICENSE' 2023-03-13T13:21:41,585 writing manifest file 'bcbio_gff.egg-info/SOURCES.txt' 2023-03-13T13:21:41,588 Copying bcbio_gff.egg-info to build/bdist.linux-armv7l/wheel/bcbio_gff-0.7.0-py3.7.egg-info 2023-03-13T13:21:41,607 running install_scripts 2023-03-13T13:21:41,633 creating build/bdist.linux-armv7l/wheel/bcbio_gff-0.7.0.dist-info/WHEEL 2023-03-13T13:21:41,638 creating '/tmp/pip-wheel-ioww_lsk/bcbio_gff-0.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-13T13:21:41,642 adding 'BCBio/__init__.py' 2023-03-13T13:21:41,647 adding 'BCBio/GFF/GFFOutput.py' 2023-03-13T13:21:41,660 adding 'BCBio/GFF/GFFParser.py' 2023-03-13T13:21:41,663 adding 'BCBio/GFF/__init__.py' 2023-03-13T13:21:41,665 adding 'BCBio/GFF/_utils.py' 2023-03-13T13:21:41,670 adding 'bcbio_gff-0.7.0.dist-info/LICENSE' 2023-03-13T13:21:41,672 adding 'bcbio_gff-0.7.0.dist-info/METADATA' 2023-03-13T13:21:41,674 adding 'bcbio_gff-0.7.0.dist-info/WHEEL' 2023-03-13T13:21:41,676 adding 'bcbio_gff-0.7.0.dist-info/top_level.txt' 2023-03-13T13:21:41,678 adding 'bcbio_gff-0.7.0.dist-info/RECORD' 2023-03-13T13:21:41,680 removing build/bdist.linux-armv7l/wheel 2023-03-13T13:21:41,858 Building wheel for bcbio-gff (setup.py): finished with status 'done' 2023-03-13T13:21:41,865 Created wheel for bcbio-gff: filename=bcbio_gff-0.7.0-py3-none-any.whl size=16043 sha256=cd4b2591d4c2aa1eabff8d2c9285bf51a104beb162e60cbfad991f4d79caf5f4 2023-03-13T13:21:41,868 Stored in directory: /tmp/pip-ephem-wheel-cache-7m16t7zh/wheels/9a/7f/ba/f80b1571933db0b36557b0417a32e0b2d1c702c8010fd6f0e9 2023-03-13T13:21:41,891 Successfully built bcbio-gff 2023-03-13T13:21:41,899 Removed build tracker: '/tmp/pip-build-tracker-pkr9k09d'