2023-03-13T16:19:48,052 Created temporary directory: /tmp/pip-ephem-wheel-cache-55thuyye 2023-03-13T16:19:48,057 Created temporary directory: /tmp/pip-build-tracker-vp0c9cvx 2023-03-13T16:19:48,058 Initialized build tracking at /tmp/pip-build-tracker-vp0c9cvx 2023-03-13T16:19:48,058 Created build tracker: /tmp/pip-build-tracker-vp0c9cvx 2023-03-13T16:19:48,059 Entered build tracker: /tmp/pip-build-tracker-vp0c9cvx 2023-03-13T16:19:48,060 Created temporary directory: /tmp/pip-wheel-irgf4aqm 2023-03-13T16:19:48,070 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-13T16:19:48,076 Created temporary directory: /tmp/pip-ephem-wheel-cache-5x13hh92 2023-03-13T16:19:48,128 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-13T16:19:48,135 2 location(s) to search for versions of npyc: 2023-03-13T16:19:48,135 * https://pypi.org/simple/npyc/ 2023-03-13T16:19:48,135 * https://www.piwheels.org/simple/npyc/ 2023-03-13T16:19:48,136 Fetching project page and analyzing links: https://pypi.org/simple/npyc/ 2023-03-13T16:19:48,137 Getting page https://pypi.org/simple/npyc/ 2023-03-13T16:19:48,141 Found index url https://pypi.org/simple 2023-03-13T16:19:48,327 Fetched page https://pypi.org/simple/npyc/ as application/vnd.pypi.simple.v1+json 2023-03-13T16:19:48,338 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/70/51/a36b75924f2d66c3267643fba5827ce806599c7796d796d16e4ef409b536/nPYc-1.0.4-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,339 Found link https://files.pythonhosted.org/packages/59/f9/d837e5faeb061dab18be5da518a37308e6f6b8f5d1f2fdcd22da2ddaa9f9/nPYc-1.0.4.tar.gz (from https://pypi.org/simple/npyc/), version: 1.0.4 2023-03-13T16:19:48,340 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/96/b6/7c905977a55bde0be11233ea1c47c9509ebd9e332e2bcec4e7f582a5722c/nPYc-1.1.0-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,340 Found link https://files.pythonhosted.org/packages/f2/ff/477e3f03ac749d4fbafbc8fb0601f42c9c86bc8c352d3679a0046c29a9a0/nPYc-1.1.0.tar.gz (from https://pypi.org/simple/npyc/), version: 1.1.0 2023-03-13T16:19:48,341 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/3c/a9/66462e34beef7dffa7eb58cf6c4ee659970ab65f3025b34976ae84d74775/nPYc-1.1.1-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,342 Found link https://files.pythonhosted.org/packages/41/4a/7c0bdd21584e52b8e787a9970fb76ccb9cf2345a321bc15372ad21a3d77a/nPYc-1.1.1.tar.gz (from https://pypi.org/simple/npyc/), version: 1.1.1 2023-03-13T16:19:48,342 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/83/f2/2fda345ea54a80d4d4d65903e2bc8272859a2c1eb12c9de2e65bb0481f37/nPYc-1.1.2-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,343 Found link https://files.pythonhosted.org/packages/38/43/2ebd159495767aa83f37ae9bae819e0a7cb48cc2d7949887f64f4dcdc68a/nPYc-1.1.2.tar.gz (from https://pypi.org/simple/npyc/), version: 1.1.2 2023-03-13T16:19:48,343 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/55/5f/a70c5ca7a2ab16ad00d611d709616685e5b0ea873e19cb92779e913b9820/nPYc-1.1.3-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,344 Found link https://files.pythonhosted.org/packages/d8/f5/40340d291a932dc309754bde861f5d69ab65775bca933e78c8872fd5227e/nPYc-1.1.3.tar.gz (from https://pypi.org/simple/npyc/), version: 1.1.3 2023-03-13T16:19:48,345 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/88/4e/224df1c51b47ca38a32866ba526eea19547d4b4a231502aa301c6daf5059/nPYc-1.2.0-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,345 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/c5/b1/10d2e66b568ceef3dfc63d9f877e423775087e0037155c73e7d427bf1f36/nPYc-1.2.1-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,346 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/a4/df/b3483d0557ccd5aa0fe39452ac6becfe2eda1cea5eb4b4d930b6fb8ff336/nPYc-1.2.3-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,346 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/4a/5e/22a7a26ee0bc5a41a7d2293f9ebbb2dc9c8ca8427d1d9b9cccaead3e0bda/nPYc-1.2.4-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,347 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/78/55/13acd307833dd53d30b48f1071fcb581de557601baddddee2d3aacd15b27/nPYc-1.2.5-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,347 Found link https://files.pythonhosted.org/packages/aa/90/fe2f5a62f223d293ab4e07b0162df579777cd9042c2390407e22576b2ab8/nPYc-1.2.5.tar.gz (from https://pypi.org/simple/npyc/), version: 1.2.5 2023-03-13T16:19:48,348 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/43/ba/46dd8d3372c395dae2eba87fd578ded6f51fbf6d0f79f8738fb8e8116f11/nPYc-1.2.6-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,348 Found link https://files.pythonhosted.org/packages/9b/3b/e1bb60fdbc83aad22701484d0f1e76aed83080f6f1f9af9e80980de922ca/nPYc-1.2.6.tar.gz (from https://pypi.org/simple/npyc/), version: 1.2.6 2023-03-13T16:19:48,349 Skipping link: No binaries permitted for npyc: https://files.pythonhosted.org/packages/99/f1/6f00a94f6c33de9a184109f5418ba11bb676eeba8035422d8b195360f761/nPYc-1.2.7-py3-none-any.whl (from https://pypi.org/simple/npyc/) 2023-03-13T16:19:48,350 Found link https://files.pythonhosted.org/packages/3e/30/56b9c50e6793aabf2bb7190562fbe1f03013d551223a772e8ee97173d14e/nPYc-1.2.7.tar.gz (from https://pypi.org/simple/npyc/), version: 1.2.7 2023-03-13T16:19:48,351 Fetching project page and analyzing links: https://www.piwheels.org/simple/npyc/ 2023-03-13T16:19:48,351 Getting page https://www.piwheels.org/simple/npyc/ 2023-03-13T16:19:48,353 Found index url https://www.piwheels.org/simple 2023-03-13T16:19:48,575 Fetched page https://www.piwheels.org/simple/npyc/ as text/html 2023-03-13T16:19:48,582 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.2.6-py3-none-any.whl#sha256=faed6be98cf44fab31a3976e9c228eef635c7109e57e653c481a6c3a32938790 (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,582 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.2.5-py3-none-any.whl#sha256=3eceddfcbd152dd0b35b8460998eef5bd8329ba359e5491b88f811f402489036 (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,583 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.1.3-py3-none-any.whl#sha256=93273fdebf94627160600ccc7b58a026b7cbe00ef94e20d926f1fd7afd7cab7a (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,583 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.1.2-py3-none-any.whl#sha256=0b3524c840f7ea407035ecbb37997438c595613ddf46d1918642b7e803ed7362 (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,584 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.1.1-py3-none-any.whl#sha256=dc1be4f578a342f8fdb8b350760a53b8e6471a87f68cfdef908642f7157e0dd2 (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,584 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.1.0-py3-none-any.whl#sha256=4bb1d3de7f0ff670d80fa46641b160311a9c9677548c7468f3cc3f17a4012025 (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,585 Skipping link: No binaries permitted for npyc: https://www.piwheels.org/simple/npyc/nPYc-1.0.4-py3-none-any.whl#sha256=7a86f68a638a86c8e8164d7cf61b47c156e2901534927f8fd5a8bbdcdbe358fc (from https://www.piwheels.org/simple/npyc/) 2023-03-13T16:19:48,585 Skipping link: not a file: https://www.piwheels.org/simple/npyc/ 2023-03-13T16:19:48,586 Skipping link: not a file: https://pypi.org/simple/npyc/ 2023-03-13T16:19:48,623 Given no hashes to check 1 links for project 'npyc': discarding no candidates 2023-03-13T16:19:48,654 Collecting npyc==1.2.7 2023-03-13T16:19:48,659 Created temporary directory: /tmp/pip-unpack-gq2k4jbh 2023-03-13T16:19:48,899 Downloading nPYc-1.2.7.tar.gz (301 kB) 2023-03-13T16:19:49,737 Added npyc==1.2.7 from https://files.pythonhosted.org/packages/3e/30/56b9c50e6793aabf2bb7190562fbe1f03013d551223a772e8ee97173d14e/nPYc-1.2.7.tar.gz to build tracker '/tmp/pip-build-tracker-vp0c9cvx' 2023-03-13T16:19:49,740 Running setup.py (path:/tmp/pip-wheel-irgf4aqm/npyc_dc492e432f984ec1b6334a3c554007ab/setup.py) egg_info for package npyc 2023-03-13T16:19:49,741 Created temporary directory: /tmp/pip-pip-egg-info-s1xqsmio 2023-03-13T16:19:49,742 Preparing metadata (setup.py): started 2023-03-13T16:19:49,744 Running command python setup.py egg_info 2023-03-13T16:19:51,236 running egg_info 2023-03-13T16:19:51,238 creating /tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info 2023-03-13T16:19:51,289 writing /tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/PKG-INFO 2023-03-13T16:19:51,294 writing dependency_links to /tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/dependency_links.txt 2023-03-13T16:19:51,299 writing requirements to /tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/requires.txt 2023-03-13T16:19:51,301 writing top-level names to /tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/top_level.txt 2023-03-13T16:19:51,304 writing manifest file '/tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/SOURCES.txt' 2023-03-13T16:19:51,481 reading manifest file '/tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/SOURCES.txt' 2023-03-13T16:19:51,485 reading manifest template 'MANIFEST.in' 2023-03-13T16:19:51,486 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'documentation' 2023-03-13T16:19:51,487 warnings.warn(msg) 2023-03-13T16:19:51,487 warning: no files found matching 'COPYING.txt' 2023-03-13T16:19:51,941 adding license file 'LICENSE.md' 2023-03-13T16:19:51,957 writing manifest file '/tmp/pip-pip-egg-info-s1xqsmio/nPYc.egg-info/SOURCES.txt' 2023-03-13T16:19:52,075 Preparing metadata (setup.py): finished with status 'done' 2023-03-13T16:19:52,088 Source in /tmp/pip-wheel-irgf4aqm/npyc_dc492e432f984ec1b6334a3c554007ab has version 1.2.7, which satisfies requirement npyc==1.2.7 from https://files.pythonhosted.org/packages/3e/30/56b9c50e6793aabf2bb7190562fbe1f03013d551223a772e8ee97173d14e/nPYc-1.2.7.tar.gz 2023-03-13T16:19:52,090 Removed npyc==1.2.7 from https://files.pythonhosted.org/packages/3e/30/56b9c50e6793aabf2bb7190562fbe1f03013d551223a772e8ee97173d14e/nPYc-1.2.7.tar.gz from build tracker '/tmp/pip-build-tracker-vp0c9cvx' 2023-03-13T16:19:52,101 Created temporary directory: /tmp/pip-unpack-5m_ooxpt 2023-03-13T16:19:52,103 Building wheels for collected packages: npyc 2023-03-13T16:19:52,112 Created temporary directory: /tmp/pip-wheel-7jwx1ipk 2023-03-13T16:19:52,113 Building wheel for npyc (setup.py): started 2023-03-13T16:19:52,115 Destination directory: /tmp/pip-wheel-7jwx1ipk 2023-03-13T16:19:52,115 Running command python setup.py bdist_wheel 2023-03-13T16:19:53,323 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'documentation' 2023-03-13T16:19:53,324 warnings.warn(msg) 2023-03-13T16:19:54,028 running bdist_wheel 2023-03-13T16:19:54,185 running build 2023-03-13T16:19:54,186 running build_py 2023-03-13T16:19:54,244 creating build 2023-03-13T16:19:54,245 creating build/lib 2023-03-13T16:19:54,247 creating build/lib/nPYc 2023-03-13T16:19:54,249 copying nPYc/_toolboxPath.py -> build/lib/nPYc 2023-03-13T16:19:54,253 copying nPYc/__init__.py -> build/lib/nPYc 2023-03-13T16:19:54,258 creating build/lib/nPYc/reports 2023-03-13T16:19:54,260 copying nPYc/reports/_generateSampleReport.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,264 copying nPYc/reports/featureID.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,270 copying nPYc/reports/_generateFeatureDistributionReport.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,273 copying nPYc/reports/_generateBasicPCAReport.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,276 copying nPYc/reports/_finalReportPeakPantheR.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,281 copying nPYc/reports/generateReport.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,286 copying nPYc/reports/_generateReportMS.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,294 copying nPYc/reports/__init__.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,297 copying nPYc/reports/_generateReportNMR.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,302 copying nPYc/reports/_generateReportTargeted.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,310 copying nPYc/reports/metadata.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,313 copying nPYc/reports/multivariateReport.py -> build/lib/nPYc/reports 2023-03-13T16:19:54,319 creating build/lib/nPYc/enumerations 2023-03-13T16:19:54,321 copying nPYc/enumerations/_enumerations.py -> build/lib/nPYc/enumerations 2023-03-13T16:19:54,325 copying nPYc/enumerations/__init__.py -> build/lib/nPYc/enumerations 2023-03-13T16:19:54,332 creating build/lib/nPYc/plotting 2023-03-13T16:19:54,333 copying nPYc/plotting/_plotTargetedFeatureDistribution.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,337 copying nPYc/plotting/_plotTargeted.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,341 copying nPYc/plotting/_violinPlot.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,344 copying nPYc/plotting/_plotting.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,348 copying nPYc/plotting/_jointplotRSDvCorrelation.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,352 copying nPYc/plotting/_plotBatchAndROCorrection.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,357 copying nPYc/plotting/_plotSpectralVariance.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,361 copying nPYc/plotting/_correlationSpectroscopy.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,364 copying nPYc/plotting/_plotNMRsolvent.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,368 copying nPYc/plotting/_plotNMRcalibration.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,372 copying nPYc/plotting/_plotNMRbaseline.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,376 copying nPYc/plotting/_plotLOQRunOrder.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,381 copying nPYc/plotting/_nmrPlotting.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,386 copying nPYc/plotting/_plotFeatureLOQ.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,391 copying nPYc/plotting/_plotIonMap.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,395 copying nPYc/plotting/_plotVariableScatter.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,400 copying nPYc/plotting/__init__.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,404 copying nPYc/plotting/_plotDiscreteLoadings.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,408 copying nPYc/plotting/_plotRSDs.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,413 copying nPYc/plotting/_multivariatePlotting.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,419 copying nPYc/plotting/_rangeFrameLocator.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,423 copying nPYc/plotting/_plotTIC.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,428 copying nPYc/plotting/_plotFeatureAccuracyPrecision.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,433 copying nPYc/plotting/_plotFeatureRanges.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,437 copying nPYc/plotting/_plotLOQFeatureViolin.py -> build/lib/nPYc/plotting 2023-03-13T16:19:54,443 creating build/lib/nPYc/multivariate 2023-03-13T16:19:54,446 copying nPYc/multivariate/multivariateUtilities.py -> build/lib/nPYc/multivariate 2023-03-13T16:19:54,451 copying nPYc/multivariate/exploratoryAnalysisPCA.py -> build/lib/nPYc/multivariate 2023-03-13T16:19:54,455 copying nPYc/multivariate/__init__.py -> build/lib/nPYc/multivariate 2023-03-13T16:19:54,460 creating build/lib/nPYc/batchAndROCorrection 2023-03-13T16:19:54,462 copying nPYc/batchAndROCorrection/_batchAndROCorrection.py -> build/lib/nPYc/batchAndROCorrection 2023-03-13T16:19:54,467 copying nPYc/batchAndROCorrection/__init__.py -> build/lib/nPYc/batchAndROCorrection 2023-03-13T16:19:54,474 creating build/lib/nPYc/utilities 2023-03-13T16:19:54,476 copying nPYc/utilities/generic.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,480 copying nPYc/utilities/_checkInRange.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,483 copying nPYc/utilities/_filters.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,486 copying nPYc/utilities/_fitPeak.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,490 copying nPYc/utilities/_conditionalJoin.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,494 copying nPYc/utilities/_calibratePPMscale.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,497 copying nPYc/utilities/_readBrukerXML.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,501 copying nPYc/utilities/_getMetadataFrommzML.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,505 copying nPYc/utilities/_internal.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,509 copying nPYc/utilities/_buildSpectrumFromQIfeature.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,513 copying nPYc/utilities/_getMetadataFromBrukerNMR.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,517 copying nPYc/utilities/ms.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,521 copying nPYc/utilities/_importBrukerSpectrum.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,526 copying nPYc/utilities/__init__.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,530 copying nPYc/utilities/extractParams.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,534 copying nPYc/utilities/_lineWidth.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,538 copying nPYc/utilities/_getMetadataFromWatersRaw.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,542 copying nPYc/utilities/_massSpectrumBuilder.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,546 copying nPYc/utilities/_addReferenceRanges.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,550 copying nPYc/utilities/_nmr.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,553 copying nPYc/utilities/_npc_sampleledger.py -> build/lib/nPYc/utilities 2023-03-13T16:19:54,559 creating build/lib/nPYc/objects 2023-03-13T16:19:54,561 copying nPYc/objects/_nmrDataset.py -> build/lib/nPYc/objects 2023-03-13T16:19:54,566 copying nPYc/objects/_dataset.py -> build/lib/nPYc/objects 2023-03-13T16:19:54,575 copying nPYc/objects/_msDataset.py -> build/lib/nPYc/objects 2023-03-13T16:19:54,585 copying nPYc/objects/__init__.py -> build/lib/nPYc/objects 2023-03-13T16:19:54,588 copying nPYc/objects/_targetedDataset.py -> build/lib/nPYc/objects 2023-03-13T16:19:54,604 creating build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,606 copying nPYc/utilities/normalisation/_normaliserABC.py -> build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,610 copying nPYc/utilities/normalisation/_nullNormaliser.py -> build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,614 copying nPYc/utilities/normalisation/_probabilisticQuotientNormaliser.py -> build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,619 copying nPYc/utilities/normalisation/__init__.py -> build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,623 copying nPYc/utilities/normalisation/_totalAreaNormaliser.py -> build/lib/nPYc/utilities/normalisation 2023-03-13T16:19:54,626 running egg_info 2023-03-13T16:19:54,749 writing nPYc.egg-info/PKG-INFO 2023-03-13T16:19:54,753 writing dependency_links to nPYc.egg-info/dependency_links.txt 2023-03-13T16:19:54,758 writing requirements to nPYc.egg-info/requires.txt 2023-03-13T16:19:54,761 writing top-level names to nPYc.egg-info/top_level.txt 2023-03-13T16:19:54,836 reading manifest file 'nPYc.egg-info/SOURCES.txt' 2023-03-13T16:19:54,860 reading manifest template 'MANIFEST.in' 2023-03-13T16:19:54,862 warning: no files found matching 'COPYING.txt' 2023-03-13T16:19:55,313 adding license file 'LICENSE.md' 2023-03-13T16:19:55,337 writing manifest file 'nPYc.egg-info/SOURCES.txt' 2023-03-13T16:19:55,344 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'nPYc.StudyDesigns' as data is deprecated, please list it in `packages`. 2023-03-13T16:19:55,344 !! 2023-03-13T16:19:55,345 ############################ 2023-03-13T16:19:55,345 # Package would be ignored # 2023-03-13T16:19:55,346 ############################ 2023-03-13T16:19:55,346 Python recognizes 'nPYc.StudyDesigns' as an importable package, 2023-03-13T16:19:55,346 but it is not listed in the `packages` configuration of setuptools. 2023-03-13T16:19:55,347 'nPYc.StudyDesigns' has been automatically added to the distribution only 2023-03-13T16:19:55,347 because it may contain data files, but this behavior is likely to change 2023-03-13T16:19:55,348 in future versions of setuptools (and therefore is considered deprecated). 2023-03-13T16:19:55,348 Please make sure that 'nPYc.StudyDesigns' is included as a package by using 2023-03-13T16:19:55,349 the `packages` configuration field or the proper discovery methods 2023-03-13T16:19:55,349 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-13T16:19:55,349 instead of `find_packages(...)`/`find:`). 2023-03-13T16:19:55,350 You can read more about "package discovery" and "data files" on setuptools 2023-03-13T16:19:55,350 documentation page. 2023-03-13T16:19:55,351 !! 2023-03-13T16:19:55,352 check.warn(importable) 2023-03-13T16:19:55,352 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'nPYc.StudyDesigns.BlankISATAB' as data is deprecated, please list it in `packages`. 2023-03-13T16:19:55,352 !! 2023-03-13T16:19:55,353 ############################ 2023-03-13T16:19:55,354 # Package would be ignored # 2023-03-13T16:19:55,354 ############################ 2023-03-13T16:19:55,354 Python recognizes 'nPYc.StudyDesigns.BlankISATAB' as an importable package, 2023-03-13T16:19:55,354 but it is not listed in the `packages` configuration of setuptools. 2023-03-13T16:19:55,355 'nPYc.StudyDesigns.BlankISATAB' has been automatically added to the distribution only 2023-03-13T16:19:55,355 because it may contain data files, but this behavior is likely to change 2023-03-13T16:19:55,356 in future versions of setuptools (and therefore is considered deprecated). 2023-03-13T16:19:55,356 Please make sure that 'nPYc.StudyDesigns.BlankISATAB' is included as a package by using 2023-03-13T16:19:55,356 the `packages` configuration field or the proper discovery methods 2023-03-13T16:19:55,357 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-13T16:19:55,357 instead of `find_packages(...)`/`find:`). 2023-03-13T16:19:55,358 You can read more about "package discovery" and "data files" on setuptools 2023-03-13T16:19:55,358 documentation page. 2023-03-13T16:19:55,359 !! 2023-03-13T16:19:55,359 check.warn(importable) 2023-03-13T16:19:55,360 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'nPYc.StudyDesigns.ISATABFieldMappings' as data is deprecated, please list it in `packages`. 2023-03-13T16:19:55,360 !! 2023-03-13T16:19:55,361 ############################ 2023-03-13T16:19:55,361 # Package would be ignored # 2023-03-13T16:19:55,361 ############################ 2023-03-13T16:19:55,362 Python recognizes 'nPYc.StudyDesigns.ISATABFieldMappings' as an importable package, 2023-03-13T16:19:55,362 but it is not listed in the `packages` configuration of setuptools. 2023-03-13T16:19:55,363 'nPYc.StudyDesigns.ISATABFieldMappings' has been automatically added to the distribution only 2023-03-13T16:19:55,363 because it may contain data files, but this behavior is likely to change 2023-03-13T16:19:55,363 in future versions of setuptools (and therefore is considered deprecated). 2023-03-13T16:19:55,364 Please make sure that 'nPYc.StudyDesigns.ISATABFieldMappings' is included as a package by using 2023-03-13T16:19:55,364 the `packages` configuration field or the proper discovery methods 2023-03-13T16:19:55,364 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-13T16:19:55,365 instead of `find_packages(...)`/`find:`). 2023-03-13T16:19:55,365 You can read more about "package discovery" and "data files" on setuptools 2023-03-13T16:19:55,366 documentation page. 2023-03-13T16:19:55,366 !! 2023-03-13T16:19:55,367 check.warn(importable) 2023-03-13T16:19:55,367 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'nPYc.StudyDesigns.SOP' as data is deprecated, please list it in `packages`. 2023-03-13T16:19:55,368 !! 2023-03-13T16:19:55,369 ############################ 2023-03-13T16:19:55,369 # Package would be ignored # 2023-03-13T16:19:55,369 ############################ 2023-03-13T16:19:55,370 Python recognizes 'nPYc.StudyDesigns.SOP' as an importable package, 2023-03-13T16:19:55,370 but it is not listed in the `packages` configuration of setuptools. 2023-03-13T16:19:55,370 'nPYc.StudyDesigns.SOP' has been automatically added to the distribution only 2023-03-13T16:19:55,371 because it may contain data files, but this behavior is likely to change 2023-03-13T16:19:55,371 in future versions of setuptools (and therefore is considered deprecated). 2023-03-13T16:19:55,372 Please make sure that 'nPYc.StudyDesigns.SOP' is included as a package by using 2023-03-13T16:19:55,372 the `packages` configuration field or the proper discovery methods 2023-03-13T16:19:55,372 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-13T16:19:55,372 instead of `find_packages(...)`/`find:`). 2023-03-13T16:19:55,373 You can read more about "package discovery" and "data files" on setuptools 2023-03-13T16:19:55,373 documentation page. 2023-03-13T16:19:55,374 !! 2023-03-13T16:19:55,375 check.warn(importable) 2023-03-13T16:19:55,375 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'nPYc.Templates' as data is deprecated, please list it in `packages`. 2023-03-13T16:19:55,376 !! 2023-03-13T16:19:55,377 ############################ 2023-03-13T16:19:55,377 # Package would be ignored # 2023-03-13T16:19:55,377 ############################ 2023-03-13T16:19:55,378 Python recognizes 'nPYc.Templates' as an importable package, 2023-03-13T16:19:55,378 but it is not listed in the `packages` configuration of setuptools. 2023-03-13T16:19:55,379 'nPYc.Templates' has been automatically added to the distribution only 2023-03-13T16:19:55,379 because it may contain data files, but this behavior is likely to change 2023-03-13T16:19:55,379 in future versions of setuptools (and therefore is considered deprecated). 2023-03-13T16:19:55,380 Please make sure that 'nPYc.Templates' is included as a package by using 2023-03-13T16:19:55,380 the `packages` configuration field or the proper discovery methods 2023-03-13T16:19:55,381 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-13T16:19:55,381 instead of `find_packages(...)`/`find:`). 2023-03-13T16:19:55,382 You can read more about "package discovery" and "data files" on setuptools 2023-03-13T16:19:55,382 documentation page. 2023-03-13T16:19:55,383 !! 2023-03-13T16:19:55,384 check.warn(importable) 2023-03-13T16:19:55,384 creating build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,385 copying nPYc/StudyDesigns/Abbreviations.csv -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,385 copying nPYc/StudyDesigns/AssayParameters.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,385 copying nPYc/StudyDesigns/AssayParametersSchema.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,389 copying nPYc/StudyDesigns/BI-LISA_analyteGroups.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,393 copying nPYc/StudyDesigns/BI-LISA_reference_groups.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,397 copying nPYc/StudyDesigns/BI-LISA_reference_ranges.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,402 copying nPYc/StudyDesigns/BI-LISAref.csv -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,411 copying nPYc/StudyDesigns/DilutionSeries.csv -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,416 copying nPYc/StudyDesigns/ExactMasses.csv -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,421 copying nPYc/StudyDesigns/colours.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,425 copying nPYc/StudyDesigns/urine_quant_b_reference_groups.json -> build/lib/nPYc/StudyDesigns 2023-03-13T16:19:55,429 creating build/lib/nPYc/StudyDesigns/BlankISATAB 2023-03-13T16:19:55,430 creating build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:55,433 copying nPYc/StudyDesigns/BlankISATAB/blank-ms/a_npc-test-study_metabolite_profiling_mass_spectrometry.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:55,437 copying nPYc/StudyDesigns/BlankISATAB/blank-ms/i_Investigation.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:55,442 copying nPYc/StudyDesigns/BlankISATAB/blank-ms/s_NPC-Test-Study.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:55,446 creating build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:55,448 copying nPYc/StudyDesigns/BlankISATAB/blank-nmr/a_npc-test-study_metabolite_profiling_NMR_spectroscopy.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:55,452 copying nPYc/StudyDesigns/BlankISATAB/blank-nmr/i_Investigation.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:55,456 copying nPYc/StudyDesigns/BlankISATAB/blank-nmr/s_NPC-Test-Study.txt -> build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:55,460 creating build/lib/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:55,462 copying nPYc/StudyDesigns/ISATABFieldMappings/MSFields.json -> build/lib/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:55,466 copying nPYc/StudyDesigns/ISATABFieldMappings/NMRFields.json -> build/lib/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:55,470 creating build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,472 copying nPYc/StudyDesigns/SOP/AminoAcidMS.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,477 copying nPYc/StudyDesigns/SOP/BrukerBI-LISA.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,481 copying nPYc/StudyDesigns/SOP/BrukerBI-QUANT-PS.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,485 copying nPYc/StudyDesigns/SOP/BrukerQuant-UR.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,489 copying nPYc/StudyDesigns/SOP/Generic.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,493 copying nPYc/StudyDesigns/SOP/GenericMS.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,499 copying nPYc/StudyDesigns/SOP/GenericNMRblood.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,503 copying nPYc/StudyDesigns/SOP/GenericNMRurine.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,507 copying nPYc/StudyDesigns/SOP/NMR1Djresblood.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,511 copying nPYc/StudyDesigns/SOP/NMR1Djresurine.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,515 copying nPYc/StudyDesigns/SOP/OxylipinMS.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,520 copying nPYc/StudyDesigns/SOP/TryptophanMS.json -> build/lib/nPYc/StudyDesigns/SOP 2023-03-13T16:19:55,525 creating build/lib/nPYc/Templates 2023-03-13T16:19:55,527 copying nPYc/Templates/ID_request_MS.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,532 copying nPYc/Templates/MS_BatchCorrectionAssessmentReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,536 copying nPYc/Templates/MS_BatchCorrectionSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,540 copying nPYc/Templates/MS_CorrelationToDilutionReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,544 copying nPYc/Templates/MS_FeatureSelectionReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,548 copying nPYc/Templates/MS_FeatureSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,553 copying nPYc/Templates/MS_FinalSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,558 copying nPYc/Templates/MS_FinalSummaryReport_Abridged.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,562 copying nPYc/Templates/MS_peakPantheR_FinalSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,567 copying nPYc/Templates/NMR_FinalSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,571 copying nPYc/Templates/NMR_QCSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,575 copying nPYc/Templates/NPC_MultivariateReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,581 copying nPYc/Templates/Targeted_FeatureSummaryReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,585 copying nPYc/Templates/Targeted_FinalReportMS.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,590 copying nPYc/Templates/Targeted_FinalReportNMR.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,595 copying nPYc/Templates/Targeted_MergeLOQReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,599 copying nPYc/Templates/base_QC.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,603 copying nPYc/Templates/base_generic.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,608 copying nPYc/Templates/featureDistributionReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,612 copying nPYc/Templates/generateReportBILISA.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,616 copying nPYc/Templates/generateReportBIQuantUR.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,620 copying nPYc/Templates/generateReportTargeted.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,625 copying nPYc/Templates/generateSampleReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,630 copying nPYc/Templates/npc-main.css -> build/lib/nPYc/Templates 2023-03-13T16:19:55,634 copying nPYc/Templates/pcaReport.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,639 copying nPYc/Templates/sampleReportChunk.html -> build/lib/nPYc/Templates 2023-03-13T16:19:55,643 copying nPYc/Templates/toolbox_logo.png -> build/lib/nPYc/Templates 2023-03-13T16:19:55,724 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-13T16:19:55,725 setuptools.SetuptoolsDeprecationWarning, 2023-03-13T16:19:55,782 installing to build/bdist.linux-armv7l/wheel 2023-03-13T16:19:55,783 running install 2023-03-13T16:19:55,842 running install_lib 2023-03-13T16:19:55,898 creating build/bdist.linux-armv7l 2023-03-13T16:19:55,899 creating build/bdist.linux-armv7l/wheel 2023-03-13T16:19:55,903 creating build/bdist.linux-armv7l/wheel/nPYc 2023-03-13T16:19:55,907 creating build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,909 copying build/lib/nPYc/Templates/pcaReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,913 copying build/lib/nPYc/Templates/npc-main.css -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,918 copying build/lib/nPYc/Templates/Targeted_FinalReportNMR.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,923 copying build/lib/nPYc/Templates/MS_FinalSummaryReport_Abridged.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,927 copying build/lib/nPYc/Templates/MS_FeatureSelectionReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,931 copying build/lib/nPYc/Templates/MS_peakPantheR_FinalSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,935 copying build/lib/nPYc/Templates/Targeted_FeatureSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,940 copying build/lib/nPYc/Templates/MS_CorrelationToDilutionReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,943 copying build/lib/nPYc/Templates/NMR_QCSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,947 copying build/lib/nPYc/Templates/MS_BatchCorrectionSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,951 copying build/lib/nPYc/Templates/NMR_FinalSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,955 copying build/lib/nPYc/Templates/toolbox_logo.png -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,960 copying build/lib/nPYc/Templates/sampleReportChunk.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,963 copying build/lib/nPYc/Templates/MS_BatchCorrectionAssessmentReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,967 copying build/lib/nPYc/Templates/Targeted_FinalReportMS.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,971 copying build/lib/nPYc/Templates/MS_FeatureSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,975 copying build/lib/nPYc/Templates/base_QC.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,978 copying build/lib/nPYc/Templates/ID_request_MS.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,982 copying build/lib/nPYc/Templates/featureDistributionReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,986 copying build/lib/nPYc/Templates/generateReportBIQuantUR.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,990 copying build/lib/nPYc/Templates/base_generic.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,993 copying build/lib/nPYc/Templates/MS_FinalSummaryReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:55,997 copying build/lib/nPYc/Templates/generateReportTargeted.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:56,002 copying build/lib/nPYc/Templates/NPC_MultivariateReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:56,006 copying build/lib/nPYc/Templates/generateReportBILISA.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:56,010 copying build/lib/nPYc/Templates/generateSampleReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:56,013 copying build/lib/nPYc/Templates/Targeted_MergeLOQReport.html -> build/bdist.linux-armv7l/wheel/nPYc/Templates 2023-03-13T16:19:56,018 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,020 copying build/lib/nPYc/StudyDesigns/BI-LISA_reference_ranges.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,024 copying build/lib/nPYc/StudyDesigns/BI-LISA_reference_groups.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,030 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,031 copying build/lib/nPYc/StudyDesigns/SOP/GenericMS.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,036 copying build/lib/nPYc/StudyDesigns/SOP/NMR1Djresurine.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,039 copying build/lib/nPYc/StudyDesigns/SOP/OxylipinMS.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,043 copying build/lib/nPYc/StudyDesigns/SOP/GenericNMRurine.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,047 copying build/lib/nPYc/StudyDesigns/SOP/NMR1Djresblood.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,051 copying build/lib/nPYc/StudyDesigns/SOP/BrukerQuant-UR.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,054 copying build/lib/nPYc/StudyDesigns/SOP/BrukerBI-LISA.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,058 copying build/lib/nPYc/StudyDesigns/SOP/GenericNMRblood.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,061 copying build/lib/nPYc/StudyDesigns/SOP/TryptophanMS.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,065 copying build/lib/nPYc/StudyDesigns/SOP/BrukerBI-QUANT-PS.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,069 copying build/lib/nPYc/StudyDesigns/SOP/Generic.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,072 copying build/lib/nPYc/StudyDesigns/SOP/AminoAcidMS.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/SOP 2023-03-13T16:19:56,078 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:56,080 copying build/lib/nPYc/StudyDesigns/ISATABFieldMappings/MSFields.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:56,083 copying build/lib/nPYc/StudyDesigns/ISATABFieldMappings/NMRFields.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/ISATABFieldMappings 2023-03-13T16:19:56,087 copying build/lib/nPYc/StudyDesigns/colours.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,090 copying build/lib/nPYc/StudyDesigns/AssayParameters.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,094 copying build/lib/nPYc/StudyDesigns/BI-LISAref.csv -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,103 copying build/lib/nPYc/StudyDesigns/AssayParametersSchema.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,107 copying build/lib/nPYc/StudyDesigns/BI-LISA_analyteGroups.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,110 copying build/lib/nPYc/StudyDesigns/urine_quant_b_reference_groups.json -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,115 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB 2023-03-13T16:19:56,117 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:56,119 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms/i_Investigation.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:56,124 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms/s_NPC-Test-Study.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:56,127 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-ms/a_npc-test-study_metabolite_profiling_mass_spectrometry.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-ms 2023-03-13T16:19:56,132 creating build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:56,133 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr/i_Investigation.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:56,138 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr/s_NPC-Test-Study.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:56,142 copying build/lib/nPYc/StudyDesigns/BlankISATAB/blank-nmr/a_npc-test-study_metabolite_profiling_NMR_spectroscopy.txt -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns/BlankISATAB/blank-nmr 2023-03-13T16:19:56,145 copying build/lib/nPYc/StudyDesigns/Abbreviations.csv -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,150 copying build/lib/nPYc/StudyDesigns/DilutionSeries.csv -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,154 copying build/lib/nPYc/StudyDesigns/ExactMasses.csv -> build/bdist.linux-armv7l/wheel/nPYc/StudyDesigns 2023-03-13T16:19:56,160 creating build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,162 copying build/lib/nPYc/reports/_generateSampleReport.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,167 copying build/lib/nPYc/reports/featureID.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,173 copying build/lib/nPYc/reports/_generateFeatureDistributionReport.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,176 copying build/lib/nPYc/reports/_generateBasicPCAReport.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,180 copying build/lib/nPYc/reports/_finalReportPeakPantheR.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,184 copying build/lib/nPYc/reports/generateReport.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,188 copying build/lib/nPYc/reports/_generateReportMS.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,197 copying build/lib/nPYc/reports/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,200 copying build/lib/nPYc/reports/_generateReportNMR.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,205 copying build/lib/nPYc/reports/_generateReportTargeted.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,211 copying build/lib/nPYc/reports/metadata.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,215 copying build/lib/nPYc/reports/multivariateReport.py -> build/bdist.linux-armv7l/wheel/nPYc/reports 2023-03-13T16:19:56,222 creating build/bdist.linux-armv7l/wheel/nPYc/enumerations 2023-03-13T16:19:56,223 copying build/lib/nPYc/enumerations/_enumerations.py -> build/bdist.linux-armv7l/wheel/nPYc/enumerations 2023-03-13T16:19:56,228 copying build/lib/nPYc/enumerations/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/enumerations 2023-03-13T16:19:56,233 creating build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,235 copying build/lib/nPYc/plotting/_plotTargetedFeatureDistribution.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,239 copying build/lib/nPYc/plotting/_plotTargeted.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,242 copying build/lib/nPYc/plotting/_violinPlot.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,246 copying build/lib/nPYc/plotting/_plotting.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,251 copying build/lib/nPYc/plotting/_jointplotRSDvCorrelation.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,254 copying build/lib/nPYc/plotting/_plotBatchAndROCorrection.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,259 copying build/lib/nPYc/plotting/_plotSpectralVariance.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,263 copying build/lib/nPYc/plotting/_correlationSpectroscopy.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,266 copying build/lib/nPYc/plotting/_plotNMRsolvent.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,270 copying build/lib/nPYc/plotting/_plotNMRcalibration.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,274 copying build/lib/nPYc/plotting/_plotNMRbaseline.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,278 copying build/lib/nPYc/plotting/_plotLOQRunOrder.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,283 copying build/lib/nPYc/plotting/_nmrPlotting.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,287 copying build/lib/nPYc/plotting/_plotFeatureLOQ.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,292 copying build/lib/nPYc/plotting/_plotIonMap.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,296 copying build/lib/nPYc/plotting/_plotVariableScatter.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,301 copying build/lib/nPYc/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,304 copying build/lib/nPYc/plotting/_plotDiscreteLoadings.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,308 copying build/lib/nPYc/plotting/_plotRSDs.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,312 copying build/lib/nPYc/plotting/_multivariatePlotting.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,319 copying build/lib/nPYc/plotting/_rangeFrameLocator.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,322 copying build/lib/nPYc/plotting/_plotTIC.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,326 copying build/lib/nPYc/plotting/_plotFeatureAccuracyPrecision.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,330 copying build/lib/nPYc/plotting/_plotFeatureRanges.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,334 copying build/lib/nPYc/plotting/_plotLOQFeatureViolin.py -> build/bdist.linux-armv7l/wheel/nPYc/plotting 2023-03-13T16:19:56,340 creating build/bdist.linux-armv7l/wheel/nPYc/multivariate 2023-03-13T16:19:56,342 copying build/lib/nPYc/multivariate/multivariateUtilities.py -> build/bdist.linux-armv7l/wheel/nPYc/multivariate 2023-03-13T16:19:56,346 copying build/lib/nPYc/multivariate/exploratoryAnalysisPCA.py -> build/bdist.linux-armv7l/wheel/nPYc/multivariate 2023-03-13T16:19:56,350 copying build/lib/nPYc/multivariate/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/multivariate 2023-03-13T16:19:56,353 copying build/lib/nPYc/_toolboxPath.py -> build/bdist.linux-armv7l/wheel/nPYc 2023-03-13T16:19:56,358 creating build/bdist.linux-armv7l/wheel/nPYc/batchAndROCorrection 2023-03-13T16:19:56,360 copying build/lib/nPYc/batchAndROCorrection/_batchAndROCorrection.py -> build/bdist.linux-armv7l/wheel/nPYc/batchAndROCorrection 2023-03-13T16:19:56,365 copying build/lib/nPYc/batchAndROCorrection/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/batchAndROCorrection 2023-03-13T16:19:56,370 creating build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,371 copying build/lib/nPYc/utilities/generic.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,375 copying build/lib/nPYc/utilities/_checkInRange.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,379 copying build/lib/nPYc/utilities/_filters.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,383 copying build/lib/nPYc/utilities/_fitPeak.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,387 copying build/lib/nPYc/utilities/_conditionalJoin.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,391 copying build/lib/nPYc/utilities/_calibratePPMscale.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,395 copying build/lib/nPYc/utilities/_readBrukerXML.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,399 copying build/lib/nPYc/utilities/_getMetadataFrommzML.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,403 copying build/lib/nPYc/utilities/_internal.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,406 copying build/lib/nPYc/utilities/_buildSpectrumFromQIfeature.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,410 copying build/lib/nPYc/utilities/_getMetadataFromBrukerNMR.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,413 copying build/lib/nPYc/utilities/ms.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,417 copying build/lib/nPYc/utilities/_importBrukerSpectrum.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,422 copying build/lib/nPYc/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,425 copying build/lib/nPYc/utilities/extractParams.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,430 creating build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,432 copying build/lib/nPYc/utilities/normalisation/_normaliserABC.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,435 copying build/lib/nPYc/utilities/normalisation/_nullNormaliser.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,439 copying build/lib/nPYc/utilities/normalisation/_probabilisticQuotientNormaliser.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,443 copying build/lib/nPYc/utilities/normalisation/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,446 copying build/lib/nPYc/utilities/normalisation/_totalAreaNormaliser.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities/normalisation 2023-03-13T16:19:56,450 copying build/lib/nPYc/utilities/_lineWidth.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,453 copying build/lib/nPYc/utilities/_getMetadataFromWatersRaw.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,457 copying build/lib/nPYc/utilities/_massSpectrumBuilder.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,460 copying build/lib/nPYc/utilities/_addReferenceRanges.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,464 copying build/lib/nPYc/utilities/_nmr.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,467 copying build/lib/nPYc/utilities/_npc_sampleledger.py -> build/bdist.linux-armv7l/wheel/nPYc/utilities 2023-03-13T16:19:56,470 copying build/lib/nPYc/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc 2023-03-13T16:19:56,475 creating build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,476 copying build/lib/nPYc/objects/_nmrDataset.py -> build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,481 copying build/lib/nPYc/objects/_dataset.py -> build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,490 copying build/lib/nPYc/objects/_msDataset.py -> build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,501 copying build/lib/nPYc/objects/__init__.py -> build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,505 copying build/lib/nPYc/objects/_targetedDataset.py -> build/bdist.linux-armv7l/wheel/nPYc/objects 2023-03-13T16:19:56,521 running install_egg_info 2023-03-13T16:19:56,590 Copying nPYc.egg-info to build/bdist.linux-armv7l/wheel/nPYc-1.2.7-py3.7.egg-info 2023-03-13T16:19:56,615 running install_scripts 2023-03-13T16:19:56,660 adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*") 2023-03-13T16:19:56,668 creating build/bdist.linux-armv7l/wheel/nPYc-1.2.7.dist-info/WHEEL 2023-03-13T16:19:56,673 creating '/tmp/pip-wheel-7jwx1ipk/nPYc-1.2.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-13T16:19:56,678 adding 'nPYc/__init__.py' 2023-03-13T16:19:56,681 adding 'nPYc/_toolboxPath.py' 2023-03-13T16:19:56,684 adding 'nPYc/StudyDesigns/Abbreviations.csv' 2023-03-13T16:19:56,687 adding 'nPYc/StudyDesigns/AssayParameters.json' 2023-03-13T16:19:56,690 adding 'nPYc/StudyDesigns/AssayParametersSchema.json' 2023-03-13T16:19:56,692 adding 'nPYc/StudyDesigns/BI-LISA_analyteGroups.json' 2023-03-13T16:19:56,695 adding 'nPYc/StudyDesigns/BI-LISA_reference_groups.json' 2023-03-13T16:19:56,698 adding 'nPYc/StudyDesigns/BI-LISA_reference_ranges.json' 2023-03-13T16:19:56,755 adding 'nPYc/StudyDesigns/BI-LISAref.csv' 2023-03-13T16:19:56,759 adding 'nPYc/StudyDesigns/DilutionSeries.csv' 2023-03-13T16:19:56,764 adding 'nPYc/StudyDesigns/ExactMasses.csv' 2023-03-13T16:19:56,767 adding 'nPYc/StudyDesigns/colours.json' 2023-03-13T16:19:56,769 adding 'nPYc/StudyDesigns/urine_quant_b_reference_groups.json' 2023-03-13T16:19:56,774 adding 'nPYc/StudyDesigns/BlankISATAB/blank-ms/a_npc-test-study_metabolite_profiling_mass_spectrometry.txt' 2023-03-13T16:19:56,777 adding 'nPYc/StudyDesigns/BlankISATAB/blank-ms/i_Investigation.txt' 2023-03-13T16:19:56,780 adding 'nPYc/StudyDesigns/BlankISATAB/blank-ms/s_NPC-Test-Study.txt' 2023-03-13T16:19:56,783 adding 'nPYc/StudyDesigns/BlankISATAB/blank-nmr/a_npc-test-study_metabolite_profiling_NMR_spectroscopy.txt' 2023-03-13T16:19:56,786 adding 'nPYc/StudyDesigns/BlankISATAB/blank-nmr/i_Investigation.txt' 2023-03-13T16:19:56,789 adding 'nPYc/StudyDesigns/BlankISATAB/blank-nmr/s_NPC-Test-Study.txt' 2023-03-13T16:19:56,793 adding 'nPYc/StudyDesigns/ISATABFieldMappings/MSFields.json' 2023-03-13T16:19:56,795 adding 'nPYc/StudyDesigns/ISATABFieldMappings/NMRFields.json' 2023-03-13T16:19:56,800 adding 'nPYc/StudyDesigns/SOP/AminoAcidMS.json' 2023-03-13T16:19:56,803 adding 'nPYc/StudyDesigns/SOP/BrukerBI-LISA.json' 2023-03-13T16:19:56,806 adding 'nPYc/StudyDesigns/SOP/BrukerBI-QUANT-PS.json' 2023-03-13T16:19:56,808 adding 'nPYc/StudyDesigns/SOP/BrukerQuant-UR.json' 2023-03-13T16:19:56,811 adding 'nPYc/StudyDesigns/SOP/Generic.json' 2023-03-13T16:19:56,814 adding 'nPYc/StudyDesigns/SOP/GenericMS.json' 2023-03-13T16:19:56,817 adding 'nPYc/StudyDesigns/SOP/GenericNMRblood.json' 2023-03-13T16:19:56,820 adding 'nPYc/StudyDesigns/SOP/GenericNMRurine.json' 2023-03-13T16:19:56,823 adding 'nPYc/StudyDesigns/SOP/NMR1Djresblood.json' 2023-03-13T16:19:56,826 adding 'nPYc/StudyDesigns/SOP/NMR1Djresurine.json' 2023-03-13T16:19:56,830 adding 'nPYc/StudyDesigns/SOP/OxylipinMS.json' 2023-03-13T16:19:56,833 adding 'nPYc/StudyDesigns/SOP/TryptophanMS.json' 2023-03-13T16:19:56,838 adding 'nPYc/Templates/ID_request_MS.html' 2023-03-13T16:19:56,841 adding 'nPYc/Templates/MS_BatchCorrectionAssessmentReport.html' 2023-03-13T16:19:56,844 adding 'nPYc/Templates/MS_BatchCorrectionSummaryReport.html' 2023-03-13T16:19:56,846 adding 'nPYc/Templates/MS_CorrelationToDilutionReport.html' 2023-03-13T16:19:56,849 adding 'nPYc/Templates/MS_FeatureSelectionReport.html' 2023-03-13T16:19:56,852 adding 'nPYc/Templates/MS_FeatureSummaryReport.html' 2023-03-13T16:19:56,855 adding 'nPYc/Templates/MS_FinalSummaryReport.html' 2023-03-13T16:19:56,858 adding 'nPYc/Templates/MS_FinalSummaryReport_Abridged.html' 2023-03-13T16:19:56,861 adding 'nPYc/Templates/MS_peakPantheR_FinalSummaryReport.html' 2023-03-13T16:19:56,864 adding 'nPYc/Templates/NMR_FinalSummaryReport.html' 2023-03-13T16:19:56,867 adding 'nPYc/Templates/NMR_QCSummaryReport.html' 2023-03-13T16:19:56,870 adding 'nPYc/Templates/NPC_MultivariateReport.html' 2023-03-13T16:19:56,874 adding 'nPYc/Templates/Targeted_FeatureSummaryReport.html' 2023-03-13T16:19:56,877 adding 'nPYc/Templates/Targeted_FinalReportMS.html' 2023-03-13T16:19:56,880 adding 'nPYc/Templates/Targeted_FinalReportNMR.html' 2023-03-13T16:19:56,883 adding 'nPYc/Templates/Targeted_MergeLOQReport.html' 2023-03-13T16:19:56,885 adding 'nPYc/Templates/base_QC.html' 2023-03-13T16:19:56,888 adding 'nPYc/Templates/base_generic.html' 2023-03-13T16:19:56,891 adding 'nPYc/Templates/featureDistributionReport.html' 2023-03-13T16:19:56,894 adding 'nPYc/Templates/generateReportBILISA.html' 2023-03-13T16:19:56,897 adding 'nPYc/Templates/generateReportBIQuantUR.html' 2023-03-13T16:19:56,900 adding 'nPYc/Templates/generateReportTargeted.html' 2023-03-13T16:19:56,903 adding 'nPYc/Templates/generateSampleReport.html' 2023-03-13T16:19:56,907 adding 'nPYc/Templates/npc-main.css' 2023-03-13T16:19:56,910 adding 'nPYc/Templates/pcaReport.html' 2023-03-13T16:19:56,912 adding 'nPYc/Templates/sampleReportChunk.html' 2023-03-13T16:19:56,919 adding 'nPYc/Templates/toolbox_logo.png' 2023-03-13T16:19:56,923 adding 'nPYc/batchAndROCorrection/__init__.py' 2023-03-13T16:19:56,928 adding 'nPYc/batchAndROCorrection/_batchAndROCorrection.py' 2023-03-13T16:19:56,932 adding 'nPYc/enumerations/__init__.py' 2023-03-13T16:19:56,935 adding 'nPYc/enumerations/_enumerations.py' 2023-03-13T16:19:56,939 adding 'nPYc/multivariate/__init__.py' 2023-03-13T16:19:56,942 adding 'nPYc/multivariate/exploratoryAnalysisPCA.py' 2023-03-13T16:19:56,945 adding 'nPYc/multivariate/multivariateUtilities.py' 2023-03-13T16:19:56,949 adding 'nPYc/objects/__init__.py' 2023-03-13T16:19:56,973 adding 'nPYc/objects/_dataset.py' 2023-03-13T16:19:57,007 adding 'nPYc/objects/_msDataset.py' 2023-03-13T16:19:57,016 adding 'nPYc/objects/_nmrDataset.py' 2023-03-13T16:19:57,069 adding 'nPYc/objects/_targetedDataset.py' 2023-03-13T16:19:57,079 adding 'nPYc/plotting/__init__.py' 2023-03-13T16:19:57,082 adding 'nPYc/plotting/_correlationSpectroscopy.py' 2023-03-13T16:19:57,085 adding 'nPYc/plotting/_jointplotRSDvCorrelation.py' 2023-03-13T16:19:57,098 adding 'nPYc/plotting/_multivariatePlotting.py' 2023-03-13T16:19:57,103 adding 'nPYc/plotting/_nmrPlotting.py' 2023-03-13T16:19:57,108 adding 'nPYc/plotting/_plotBatchAndROCorrection.py' 2023-03-13T16:19:57,111 adding 'nPYc/plotting/_plotDiscreteLoadings.py' 2023-03-13T16:19:57,114 adding 'nPYc/plotting/_plotFeatureAccuracyPrecision.py' 2023-03-13T16:19:57,119 adding 'nPYc/plotting/_plotFeatureLOQ.py' 2023-03-13T16:19:57,122 adding 'nPYc/plotting/_plotFeatureRanges.py' 2023-03-13T16:19:57,126 adding 'nPYc/plotting/_plotIonMap.py' 2023-03-13T16:19:57,132 adding 'nPYc/plotting/_plotLOQFeatureViolin.py' 2023-03-13T16:19:57,138 adding 'nPYc/plotting/_plotLOQRunOrder.py' 2023-03-13T16:19:57,141 adding 'nPYc/plotting/_plotNMRbaseline.py' 2023-03-13T16:19:57,145 adding 'nPYc/plotting/_plotNMRcalibration.py' 2023-03-13T16:19:57,148 adding 'nPYc/plotting/_plotNMRsolvent.py' 2023-03-13T16:19:57,152 adding 'nPYc/plotting/_plotRSDs.py' 2023-03-13T16:19:57,156 adding 'nPYc/plotting/_plotSpectralVariance.py' 2023-03-13T16:19:57,160 adding 'nPYc/plotting/_plotTIC.py' 2023-03-13T16:19:57,164 adding 'nPYc/plotting/_plotTargeted.py' 2023-03-13T16:19:57,167 adding 'nPYc/plotting/_plotTargetedFeatureDistribution.py' 2023-03-13T16:19:57,171 adding 'nPYc/plotting/_plotVariableScatter.py' 2023-03-13T16:19:57,177 adding 'nPYc/plotting/_plotting.py' 2023-03-13T16:19:57,180 adding 'nPYc/plotting/_rangeFrameLocator.py' 2023-03-13T16:19:57,183 adding 'nPYc/plotting/_violinPlot.py' 2023-03-13T16:19:57,188 adding 'nPYc/reports/__init__.py' 2023-03-13T16:19:57,194 adding 'nPYc/reports/_finalReportPeakPantheR.py' 2023-03-13T16:19:57,197 adding 'nPYc/reports/_generateBasicPCAReport.py' 2023-03-13T16:19:57,201 adding 'nPYc/reports/_generateFeatureDistributionReport.py' 2023-03-13T16:19:57,217 adding 'nPYc/reports/_generateReportMS.py' 2023-03-13T16:19:57,224 adding 'nPYc/reports/_generateReportNMR.py' 2023-03-13T16:19:57,239 adding 'nPYc/reports/_generateReportTargeted.py' 2023-03-13T16:19:57,244 adding 'nPYc/reports/_generateSampleReport.py' 2023-03-13T16:19:57,251 adding 'nPYc/reports/featureID.py' 2023-03-13T16:19:57,255 adding 'nPYc/reports/generateReport.py' 2023-03-13T16:19:57,257 adding 'nPYc/reports/metadata.py' 2023-03-13T16:19:57,267 adding 'nPYc/reports/multivariateReport.py' 2023-03-13T16:19:57,272 adding 'nPYc/utilities/__init__.py' 2023-03-13T16:19:57,274 adding 'nPYc/utilities/_addReferenceRanges.py' 2023-03-13T16:19:57,277 adding 'nPYc/utilities/_buildSpectrumFromQIfeature.py' 2023-03-13T16:19:57,280 adding 'nPYc/utilities/_calibratePPMscale.py' 2023-03-13T16:19:57,283 adding 'nPYc/utilities/_checkInRange.py' 2023-03-13T16:19:57,285 adding 'nPYc/utilities/_conditionalJoin.py' 2023-03-13T16:19:57,288 adding 'nPYc/utilities/_filters.py' 2023-03-13T16:19:57,292 adding 'nPYc/utilities/_fitPeak.py' 2023-03-13T16:19:57,295 adding 'nPYc/utilities/_getMetadataFromBrukerNMR.py' 2023-03-13T16:19:57,298 adding 'nPYc/utilities/_getMetadataFromWatersRaw.py' 2023-03-13T16:19:57,301 adding 'nPYc/utilities/_getMetadataFrommzML.py' 2023-03-13T16:19:57,304 adding 'nPYc/utilities/_importBrukerSpectrum.py' 2023-03-13T16:19:57,307 adding 'nPYc/utilities/_internal.py' 2023-03-13T16:19:57,310 adding 'nPYc/utilities/_lineWidth.py' 2023-03-13T16:19:57,313 adding 'nPYc/utilities/_massSpectrumBuilder.py' 2023-03-13T16:19:57,315 adding 'nPYc/utilities/_nmr.py' 2023-03-13T16:19:57,318 adding 'nPYc/utilities/_npc_sampleledger.py' 2023-03-13T16:19:57,322 adding 'nPYc/utilities/_readBrukerXML.py' 2023-03-13T16:19:57,325 adding 'nPYc/utilities/extractParams.py' 2023-03-13T16:19:57,328 adding 'nPYc/utilities/generic.py' 2023-03-13T16:19:57,331 adding 'nPYc/utilities/ms.py' 2023-03-13T16:19:57,335 adding 'nPYc/utilities/normalisation/__init__.py' 2023-03-13T16:19:57,338 adding 'nPYc/utilities/normalisation/_normaliserABC.py' 2023-03-13T16:19:57,341 adding 'nPYc/utilities/normalisation/_nullNormaliser.py' 2023-03-13T16:19:57,344 adding 'nPYc/utilities/normalisation/_probabilisticQuotientNormaliser.py' 2023-03-13T16:19:57,347 adding 'nPYc/utilities/normalisation/_totalAreaNormaliser.py' 2023-03-13T16:19:57,351 adding 'nPYc-1.2.7.dist-info/LICENSE.md' 2023-03-13T16:19:57,354 adding 'nPYc-1.2.7.dist-info/METADATA' 2023-03-13T16:19:57,356 adding 'nPYc-1.2.7.dist-info/WHEEL' 2023-03-13T16:19:57,358 adding 'nPYc-1.2.7.dist-info/top_level.txt' 2023-03-13T16:19:57,362 adding 'nPYc-1.2.7.dist-info/RECORD' 2023-03-13T16:19:57,381 removing build/bdist.linux-armv7l/wheel 2023-03-13T16:19:57,601 Building wheel for npyc (setup.py): finished with status 'done' 2023-03-13T16:19:57,619 Created wheel for npyc: filename=nPYc-1.2.7-py3-none-any.whl size=359928 sha256=a7060a9291fbbac3b30d3a989b7d0296918158a7dd1239fbfcd439f18d98890f 2023-03-13T16:19:57,621 Stored in directory: /tmp/pip-ephem-wheel-cache-5x13hh92/wheels/a0/d4/20/ddce06c933bb4f998551c65930663a9c092a96b11a11fd3db4 2023-03-13T16:19:57,658 Successfully built npyc 2023-03-13T16:19:57,697 Removed build tracker: '/tmp/pip-build-tracker-vp0c9cvx'