2023-03-14T01:22:50,974 Created temporary directory: /tmp/pip-ephem-wheel-cache-kkk3xzys 2023-03-14T01:22:50,977 Created temporary directory: /tmp/pip-build-tracker-q87gzdg4 2023-03-14T01:22:50,978 Initialized build tracking at /tmp/pip-build-tracker-q87gzdg4 2023-03-14T01:22:50,978 Created build tracker: /tmp/pip-build-tracker-q87gzdg4 2023-03-14T01:22:50,978 Entered build tracker: /tmp/pip-build-tracker-q87gzdg4 2023-03-14T01:22:50,979 Created temporary directory: /tmp/pip-wheel-pd_dyi3j 2023-03-14T01:22:50,983 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-14T01:22:50,986 Created temporary directory: /tmp/pip-ephem-wheel-cache-pee7pf_w 2023-03-14T01:22:51,011 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-14T01:22:51,014 2 location(s) to search for versions of gencodegenes: 2023-03-14T01:22:51,014 * https://pypi.org/simple/gencodegenes/ 2023-03-14T01:22:51,014 * https://www.piwheels.org/simple/gencodegenes/ 2023-03-14T01:22:51,014 Fetching project page and analyzing links: https://pypi.org/simple/gencodegenes/ 2023-03-14T01:22:51,015 Getting page https://pypi.org/simple/gencodegenes/ 2023-03-14T01:22:51,017 Found index url https://pypi.org/simple 2023-03-14T01:22:51,069 Fetched page https://pypi.org/simple/gencodegenes/ as application/vnd.pypi.simple.v1+json 2023-03-14T01:22:51,082 Found link https://files.pythonhosted.org/packages/0d/12/072d7deae2b505465a3fb3c418776e4aa35aded87ec5e3a2dc8a256cf7e9/gencodegenes-0.9.15.tar.gz 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No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/b5/9e/6a869d5feaae0ad866993a0fa72a994d9b5003aa75baff4ae32b6f964960/gencodegenes-1.0.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,085 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/d5/e6/e0b9d67a234ec753559ac8fb699edea2f0409fe7d0d1c9d9670f9b72a941/gencodegenes-1.0.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,085 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/1b/48/bdad56e24c1d9b5579d92538bb062426a50630f21cfe952a0fd943e4b176/gencodegenes-1.0.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,086 Found link 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https://files.pythonhosted.org/packages/c2/10/a9db4714e2a43ccbc2b7913fda7bdb8575ae7e6374afa9ae66b9e1a07e7b/gencodegenes-1.0.5-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,096 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/83/87/44d5b41cc5696d95c1bc97b0bc8e92ea9d269e0dc9156a6274c4051ad1b0/gencodegenes-1.0.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,097 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/69/7f/a5ea48c4489b14f6b851213831462ec9bf8f37ba8cb7017e71464ed4aba9/gencodegenes-1.0.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,097 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/08/3f/46fb7c9848406464bfefc358039e4ae913241b8105195be628cb87e5f376/gencodegenes-1.0.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,097 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/c0/2d/5fbb04b25a4f172e36ff717867353d8740a461ef7e0fc0ed6bc9e16b565b/gencodegenes-1.0.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,097 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/70/23/2ee5158316d73c68743ba8739ed6bcf275065a445251c4b87194c72e5571/gencodegenes-1.0.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,097 Skipping link: No binaries permitted for gencodegenes: https://files.pythonhosted.org/packages/88/73/a1bccd4aa4581d4e651afe42e1c21ac1071f63d6449e240117efa41bccf8/gencodegenes-1.0.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,098 Found link https://files.pythonhosted.org/packages/a1/83/1f8048be04e69b1d31a3ab483f0703f4b311b5900158910ebe9b3d647396/gencodegenes-1.0.5.tar.gz (from https://pypi.org/simple/gencodegenes/) (requires-python:>=3.8), version: 1.0.5 2023-03-14T01:22:51,099 Fetching project page and analyzing links: https://www.piwheels.org/simple/gencodegenes/ 2023-03-14T01:22:51,099 Getting page https://www.piwheels.org/simple/gencodegenes/ 2023-03-14T01:22:51,100 Found index url https://www.piwheels.org/simple 2023-03-14T01:22:51,269 Fetched page https://www.piwheels.org/simple/gencodegenes/ as text/html 2023-03-14T01:22:51,274 Skipping link: No binaries permitted for gencodegenes: https://www.piwheels.org/simple/gencodegenes/gencodegenes-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=e6e8caec16e08255d98aedf6166847fea938122626d4e8ba1e8d0be29391624d (from https://www.piwheels.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,275 Skipping link: No binaries permitted for gencodegenes: https://www.piwheels.org/simple/gencodegenes/gencodegenes-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=e6e8caec16e08255d98aedf6166847fea938122626d4e8ba1e8d0be29391624d (from https://www.piwheels.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,276 Skipping link: No binaries permitted for gencodegenes: https://www.piwheels.org/simple/gencodegenes/gencodegenes-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=7d4f6d406625530020a94fe09af3ab9bdc5ea1d7585f3068158152e756b1bfb1 (from https://www.piwheels.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,276 Skipping link: No binaries permitted for gencodegenes: https://www.piwheels.org/simple/gencodegenes/gencodegenes-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=7d4f6d406625530020a94fe09af3ab9bdc5ea1d7585f3068158152e756b1bfb1 (from https://www.piwheels.org/simple/gencodegenes/) (requires-python:>=3.8) 2023-03-14T01:22:51,277 Skipping link: not a file: https://www.piwheels.org/simple/gencodegenes/ 2023-03-14T01:22:51,277 Skipping link: not a file: https://pypi.org/simple/gencodegenes/ 2023-03-14T01:22:51,322 Given no hashes to check 1 links for project 'gencodegenes': discarding no candidates 2023-03-14T01:22:51,362 Collecting gencodegenes==1.0.5 2023-03-14T01:22:51,364 Created temporary directory: /tmp/pip-unpack-zl0l98hx 2023-03-14T01:22:51,584 Downloading gencodegenes-1.0.5.tar.gz (218 kB) 2023-03-14T01:22:51,747 Added gencodegenes==1.0.5 from https://files.pythonhosted.org/packages/a1/83/1f8048be04e69b1d31a3ab483f0703f4b311b5900158910ebe9b3d647396/gencodegenes-1.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-q87gzdg4' 2023-03-14T01:22:51,752 Created temporary directory: /tmp/pip-build-env-9jbvwz4g 2023-03-14T01:22:51,763 Installing build dependencies: started 2023-03-14T01:22:51,764 Running command pip subprocess to install build dependencies 2023-03-14T01:22:53,021 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-03-14T01:22:53,608 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-14T01:22:53,643 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-14T01:22:55,248 Collecting cython 2023-03-14T01:22:55,749 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.33-cp39-cp39-linux_armv7l.whl (5.0 MB) 2023-03-14T01:22:57,390 Collecting setuptools>=40.6.0 2023-03-14T01:22:57,552 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.0-py3-none-any.whl (1.1 MB) 2023-03-14T01:22:57,837 Collecting wheel 2023-03-14T01:22:57,881 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-03-14T01:22:59,709 Installing collected packages: wheel, setuptools, cython 2023-03-14T01:22:59,859 Creating /tmp/pip-build-env-9jbvwz4g/overlay/bin 2023-03-14T01:22:59,862 changing mode of /tmp/pip-build-env-9jbvwz4g/overlay/bin/wheel to 755 2023-03-14T01:23:05,016 changing mode of /tmp/pip-build-env-9jbvwz4g/overlay/bin/cygdb to 755 2023-03-14T01:23:05,019 changing mode of /tmp/pip-build-env-9jbvwz4g/overlay/bin/cython to 755 2023-03-14T01:23:05,022 changing mode of /tmp/pip-build-env-9jbvwz4g/overlay/bin/cythonize to 755 2023-03-14T01:23:05,046 Successfully installed cython-0.29.33 setuptools-67.6.0 wheel-0.38.4 2023-03-14T01:23:05,586 Installing build dependencies: finished with status 'done' 2023-03-14T01:23:05,598 Getting requirements to build wheel: started 2023-03-14T01:23:05,599 Running command Getting requirements to build wheel 2023-03-14T01:23:09,360 Compiling src/gencodegenes/transcript.pyx because it depends on /tmp/pip-build-env-9jbvwz4g/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd. 2023-03-14T01:23:09,361 Compiling src/gencodegenes/gencode.pyx because it depends on /tmp/pip-build-env-9jbvwz4g/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd. 2023-03-14T01:23:09,361 [1/2] Cythonizing src/gencodegenes/gencode.pyx 2023-03-14T01:23:09,361 [2/2] Cythonizing src/gencodegenes/transcript.pyx 2023-03-14T01:23:09,441 running egg_info 2023-03-14T01:23:09,446 writing src/gencodegenes.egg-info/PKG-INFO 2023-03-14T01:23:09,448 writing dependency_links to src/gencodegenes.egg-info/dependency_links.txt 2023-03-14T01:23:09,451 writing requirements to src/gencodegenes.egg-info/requires.txt 2023-03-14T01:23:09,452 writing top-level names to src/gencodegenes.egg-info/top_level.txt 2023-03-14T01:23:09,480 reading manifest file 'src/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:09,482 reading manifest template 'MANIFEST.in' 2023-03-14T01:23:09,486 warning: no files found matching 'src/gencodegenes/data/rates.txt' 2023-03-14T01:23:09,488 warning: no files found matching 'data/*.txt' 2023-03-14T01:23:09,489 adding license file 'LICENSE.txt' 2023-03-14T01:23:09,492 writing manifest file 'src/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:09,724 Getting requirements to build wheel: finished with status 'done' 2023-03-14T01:23:09,734 Created temporary directory: /tmp/pip-modern-metadata-81slyb4s 2023-03-14T01:23:09,737 Preparing metadata (pyproject.toml): started 2023-03-14T01:23:09,738 Running command Preparing metadata (pyproject.toml) 2023-03-14T01:23:10,975 running dist_info 2023-03-14T01:23:11,001 creating /tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info 2023-03-14T01:23:11,006 writing /tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/PKG-INFO 2023-03-14T01:23:11,009 writing dependency_links to /tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/dependency_links.txt 2023-03-14T01:23:11,011 writing requirements to /tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/requires.txt 2023-03-14T01:23:11,012 writing top-level names to /tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/top_level.txt 2023-03-14T01:23:11,014 writing manifest file '/tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:11,038 reading manifest file '/tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:11,040 reading manifest template 'MANIFEST.in' 2023-03-14T01:23:11,044 warning: no files found matching 'src/gencodegenes/data/rates.txt' 2023-03-14T01:23:11,046 warning: no files found matching 'data/*.txt' 2023-03-14T01:23:11,047 adding license file 'LICENSE.txt' 2023-03-14T01:23:11,050 writing manifest file '/tmp/pip-modern-metadata-81slyb4s/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:11,051 creating '/tmp/pip-modern-metadata-81slyb4s/gencodegenes-1.0.5.dist-info' 2023-03-14T01:23:11,362 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-14T01:23:11,369 Source in /tmp/pip-wheel-pd_dyi3j/gencodegenes_086ae80d28ce422dacb09f95f12fef76 has version 1.0.5, which satisfies requirement gencodegenes==1.0.5 from https://files.pythonhosted.org/packages/a1/83/1f8048be04e69b1d31a3ab483f0703f4b311b5900158910ebe9b3d647396/gencodegenes-1.0.5.tar.gz 2023-03-14T01:23:11,370 Removed gencodegenes==1.0.5 from https://files.pythonhosted.org/packages/a1/83/1f8048be04e69b1d31a3ab483f0703f4b311b5900158910ebe9b3d647396/gencodegenes-1.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-q87gzdg4' 2023-03-14T01:23:11,376 Created temporary directory: /tmp/pip-unpack-0gj6b5ge 2023-03-14T01:23:11,377 Building wheels for collected packages: gencodegenes 2023-03-14T01:23:11,381 Created temporary directory: /tmp/pip-wheel-fdtmep2g 2023-03-14T01:23:11,382 Destination directory: /tmp/pip-wheel-fdtmep2g 2023-03-14T01:23:11,385 Building wheel for gencodegenes (pyproject.toml): started 2023-03-14T01:23:11,386 Running command Building wheel for gencodegenes (pyproject.toml) 2023-03-14T01:23:12,723 running bdist_wheel 2023-03-14T01:23:12,745 running build 2023-03-14T01:23:12,745 running build_py 2023-03-14T01:23:12,756 creating build 2023-03-14T01:23:12,756 creating build/lib.linux-armv7l-cpython-39 2023-03-14T01:23:12,757 creating build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,758 copying src/gencodegenes/__init__.py -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,760 running egg_info 2023-03-14T01:23:12,782 writing src/gencodegenes.egg-info/PKG-INFO 2023-03-14T01:23:12,783 writing dependency_links to src/gencodegenes.egg-info/dependency_links.txt 2023-03-14T01:23:12,785 writing requirements to src/gencodegenes.egg-info/requires.txt 2023-03-14T01:23:12,786 writing top-level names to src/gencodegenes.egg-info/top_level.txt 2023-03-14T01:23:12,795 reading manifest file 'src/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:12,797 reading manifest template 'MANIFEST.in' 2023-03-14T01:23:12,801 warning: no files found matching 'src/gencodegenes/data/rates.txt' 2023-03-14T01:23:12,803 warning: no files found matching 'data/*.txt' 2023-03-14T01:23:12,803 adding license file 'LICENSE.txt' 2023-03-14T01:23:12,807 writing manifest file 'src/gencodegenes.egg-info/SOURCES.txt' 2023-03-14T01:23:12,810 copying src/gencodegenes/gencode.cpp -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,828 copying src/gencodegenes/gencode.pyx -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,830 copying src/gencodegenes/transcript.cpp -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,847 copying src/gencodegenes/transcript.pxd -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,849 copying src/gencodegenes/transcript.pyx -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,852 copying src/gencodegenes/tx.h -> build/lib.linux-armv7l-cpython-39/gencodegenes 2023-03-14T01:23:12,854 running build_ext 2023-03-14T01:23:12,860 building 'gencodegenes.transcript' extension 2023-03-14T01:23:12,860 creating build/temp.linux-armv7l-cpython-39 2023-03-14T01:23:12,861 creating build/temp.linux-armv7l-cpython-39/src 2023-03-14T01:23:12,862 creating build/temp.linux-armv7l-cpython-39/src/gencodegenes 2023-03-14T01:23:12,863 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/gencodegenes -Isrc/ -I/usr/include/python3.9 -c src/gencodegenes/transcript.cpp -o build/temp.linux-armv7l-cpython-39/src/gencodegenes/transcript.o -std=c++11 -I/usr/include 2023-03-14T01:23:32,796 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/gencodegenes -Isrc/ -I/usr/include/python3.9 -c src/tx.cpp -o build/temp.linux-armv7l-cpython-39/src/tx.o -std=c++11 -I/usr/include 2023-03-14T01:23:40,172 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/gencodegenes/transcript.o build/temp.linux-armv7l-cpython-39/src/tx.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/gencodegenes/transcript.cpython-39-arm-linux-gnueabihf.so 2023-03-14T01:23:40,600 building 'gencodegenes.gencode' extension 2023-03-14T01:23:40,601 creating build/temp.linux-armv7l-cpython-39/src/gzstream 2023-03-14T01:23:40,602 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -Isrc/zlib -I/usr/include/python3.9 -c src/gencode.cpp -o build/temp.linux-armv7l-cpython-39/src/gencode.o -std=c++11 -I/usr/include 2023-03-14T01:23:53,343 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -Isrc/zlib -I/usr/include/python3.9 -c src/gencodegenes/gencode.cpp -o build/temp.linux-armv7l-cpython-39/src/gencodegenes/gencode.o -std=c++11 -I/usr/include 2023-03-14T01:24:20,530 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -Isrc/zlib -I/usr/include/python3.9 -c src/gtf.cpp -o build/temp.linux-armv7l-cpython-39/src/gtf.o -std=c++11 -I/usr/include 2023-03-14T01:24:22,965 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -Isrc/zlib -I/usr/include/python3.9 -c src/gzstream/gzstream.C -o build/temp.linux-armv7l-cpython-39/src/gzstream/gzstream.o -std=c++11 -I/usr/include 2023-03-14T01:24:24,341 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -Isrc/zlib -I/usr/include/python3.9 -c src/tx.cpp -o build/temp.linux-armv7l-cpython-39/src/tx.o -std=c++11 -I/usr/include 2023-03-14T01:24:31,753 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/gencode.o build/temp.linux-armv7l-cpython-39/src/gencodegenes/gencode.o build/temp.linux-armv7l-cpython-39/src/gtf.o build/temp.linux-armv7l-cpython-39/src/gzstream/gzstream.o build/temp.linux-armv7l-cpython-39/src/tx.o -L/usr/lib -lz -o build/lib.linux-armv7l-cpython-39/gencodegenes/gencode.cpython-39-arm-linux-gnueabihf.so 2023-03-14T01:24:32,380 installing to build/bdist.linux-armv7l/wheel 2023-03-14T01:24:32,380 running install 2023-03-14T01:24:32,406 running install_lib 2023-03-14T01:24:32,414 creating build/bdist.linux-armv7l 2023-03-14T01:24:32,415 creating build/bdist.linux-armv7l/wheel 2023-03-14T01:24:32,417 creating build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,418 copying build/lib.linux-armv7l-cpython-39/gencodegenes/transcript.cpp -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,435 copying build/lib.linux-armv7l-cpython-39/gencodegenes/gencode.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,534 copying build/lib.linux-armv7l-cpython-39/gencodegenes/tx.h -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,536 copying build/lib.linux-armv7l-cpython-39/gencodegenes/transcript.pxd -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,539 copying build/lib.linux-armv7l-cpython-39/gencodegenes/gencode.cpp -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,556 copying build/lib.linux-armv7l-cpython-39/gencodegenes/gencode.pyx -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,559 copying build/lib.linux-armv7l-cpython-39/gencodegenes/transcript.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,611 copying build/lib.linux-armv7l-cpython-39/gencodegenes/__init__.py -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,612 copying build/lib.linux-armv7l-cpython-39/gencodegenes/transcript.pyx -> build/bdist.linux-armv7l/wheel/gencodegenes 2023-03-14T01:24:32,615 running install_egg_info 2023-03-14T01:24:32,627 Copying src/gencodegenes.egg-info to build/bdist.linux-armv7l/wheel/gencodegenes-1.0.5-py3.9.egg-info 2023-03-14T01:24:32,638 running install_scripts 2023-03-14T01:24:32,687 creating build/bdist.linux-armv7l/wheel/gencodegenes-1.0.5.dist-info/WHEEL 2023-03-14T01:24:32,690 creating '/tmp/pip-wheel-fdtmep2g/.tmp-gg9kla5w/gencodegenes-1.0.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-14T01:24:32,693 adding 'gencodegenes/__init__.py' 2023-03-14T01:24:32,753 adding 'gencodegenes/gencode.cpp' 2023-03-14T01:24:33,595 adding 'gencodegenes/gencode.cpython-39-arm-linux-gnueabihf.so' 2023-03-14T01:24:33,628 adding 'gencodegenes/gencode.pyx' 2023-03-14T01:24:33,680 adding 'gencodegenes/transcript.cpp' 2023-03-14T01:24:34,122 adding 'gencodegenes/transcript.cpython-39-arm-linux-gnueabihf.so' 2023-03-14T01:24:34,139 adding 'gencodegenes/transcript.pxd' 2023-03-14T01:24:34,142 adding 'gencodegenes/transcript.pyx' 2023-03-14T01:24:34,143 adding 'gencodegenes/tx.h' 2023-03-14T01:24:34,146 adding 'gencodegenes-1.0.5.dist-info/LICENSE.txt' 2023-03-14T01:24:34,147 adding 'gencodegenes-1.0.5.dist-info/METADATA' 2023-03-14T01:24:34,148 adding 'gencodegenes-1.0.5.dist-info/WHEEL' 2023-03-14T01:24:34,149 adding 'gencodegenes-1.0.5.dist-info/top_level.txt' 2023-03-14T01:24:34,150 adding 'gencodegenes-1.0.5.dist-info/RECORD' 2023-03-14T01:24:34,192 removing build/bdist.linux-armv7l/wheel 2023-03-14T01:24:34,341 Building wheel for gencodegenes (pyproject.toml): finished with status 'done' 2023-03-14T01:24:34,420 Created wheel for gencodegenes: filename=gencodegenes-1.0.5-cp39-cp39-linux_armv7l.whl size=2617185 sha256=1449563468d1cfffe62497f27e15fbc870e8e08c0605138f04a45af6ec4b5ae1 2023-03-14T01:24:34,421 Stored in directory: /tmp/pip-ephem-wheel-cache-pee7pf_w/wheels/b1/0a/6d/065ec5baf0b92be64882723d643fcb5195d0fcc1c43f592293 2023-03-14T01:24:34,434 Successfully built gencodegenes 2023-03-14T01:24:34,526 Removed build tracker: '/tmp/pip-build-tracker-q87gzdg4'