2023-03-16T15:24:06,761 Created temporary directory: /tmp/pip-ephem-wheel-cache-z4x6cpqw 2023-03-16T15:24:06,767 Created temporary directory: /tmp/pip-build-tracker-0x2rk__c 2023-03-16T15:24:06,768 Initialized build tracking at /tmp/pip-build-tracker-0x2rk__c 2023-03-16T15:24:06,768 Created build tracker: /tmp/pip-build-tracker-0x2rk__c 2023-03-16T15:24:06,769 Entered build tracker: /tmp/pip-build-tracker-0x2rk__c 2023-03-16T15:24:06,770 Created temporary directory: /tmp/pip-wheel-ld7b0s1u 2023-03-16T15:24:06,780 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-16T15:24:06,786 Created temporary directory: /tmp/pip-ephem-wheel-cache-vema7moc 2023-03-16T15:24:06,839 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-16T15:24:06,846 2 location(s) to search for versions of nnunet: 2023-03-16T15:24:06,846 * https://pypi.org/simple/nnunet/ 2023-03-16T15:24:06,846 * https://www.piwheels.org/simple/nnunet/ 2023-03-16T15:24:06,847 Fetching project page and analyzing links: https://pypi.org/simple/nnunet/ 2023-03-16T15:24:06,848 Getting page https://pypi.org/simple/nnunet/ 2023-03-16T15:24:06,852 Found index url https://pypi.org/simple 2023-03-16T15:24:07,036 Fetched page https://pypi.org/simple/nnunet/ as application/vnd.pypi.simple.v1+json 2023-03-16T15:24:07,059 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/98/15/8fdec75d087aaa02d6d38330444f2d69bd1de2a809ad372fdeb2bd784571/nnunet-0.1-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,060 Found link https://files.pythonhosted.org/packages/33/ef/6fc6c45e43d1a51ebb9ebc08e69f31690e3557d5836cfefbcb60767d0cfa/nnunet-0.1.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.1 2023-03-16T15:24:07,060 Found link https://files.pythonhosted.org/packages/e7/b2/78f1d207c7558b0d07a8694102038ce46136a24bb7c92b978d1b44c7f3e8/nnunet-0.2.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.2 2023-03-16T15:24:07,061 Found link https://files.pythonhosted.org/packages/f1/82/a9d49663354d4dd648ae3ed18d1b76fb4eb2371e652c3f22dbf4e891e7fa/nnunet-0.3.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.3 2023-03-16T15:24:07,062 Found link https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.4 2023-03-16T15:24:07,063 Found link https://files.pythonhosted.org/packages/d9/0b/2292bad090451127cebbc6fb5bcab7e6cfb8615cb9979c4913bf5f2c0555/nnunet-0.5.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.5 2023-03-16T15:24:07,063 Found link https://files.pythonhosted.org/packages/6e/70/3692288e6e8be826c0d620814c98009824eff879dc2e8a65fa1ee4e3d82f/nnunet-0.6.tar.gz (from https://pypi.org/simple/nnunet/), version: 0.6 2023-03-16T15:24:07,064 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/f4/16/4ff784148dcf83374fb6aeb5756f549652b1878e138de06810625089f556/nnunet-1.0-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,064 Found link https://files.pythonhosted.org/packages/ac/e3/dc6583748ff9c1d2c7de5dd57425ddf884da934b88e215db8204120c625d/nnunet-1.0.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.0 2023-03-16T15:24:07,065 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/ab/3d/5e55f6d6060a05889b633eecef11259b63951acd4607f9fc99c1318bf4ee/nnunet-1.1-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,066 Found link https://files.pythonhosted.org/packages/bd/e4/2e4e9087e82a6520bf673b0b2d7015a31211851b20988154e809b415980e/nnunet-1.1.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1 2023-03-16T15:24:07,066 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/9f/c2/0723ff3d619b5881791e44ab51bbb68f21de70640b555fa28c7d1709759e/nnunet-1.1.1-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,067 Found link https://files.pythonhosted.org/packages/e5/8b/b037dd7481cdc6625a68e01439754987dc7d4b3d8007ed47895c460df848/nnunet-1.1.1.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.1 2023-03-16T15:24:07,068 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/26/05/ace11977f336d99eac8348568361cb899cb3aa61ba659929eae1d429633c/nnunet-1.1.2-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,068 Found link https://files.pythonhosted.org/packages/a0/46/022dea11a30200b97d5b4a7aca7f3ae23e1c62bc30f58c237f3c8bf85795/nnunet-1.1.2.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.2 2023-03-16T15:24:07,069 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/61/bb/cdebaa5d04838294575b6481eee3abf595a96e021c037ce174c4ecd60c9e/nnunet-1.1.3-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,069 Found link https://files.pythonhosted.org/packages/6e/b4/3a2acb7d2767e6c4840d6ef5c5b05d2235302528628afea118c35d13c7f2/nnunet-1.1.3.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.3 2023-03-16T15:24:07,070 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/b0/87/0781ef5cc44156f56c9a5fe541b1f9cd3ca7015f834fa53e5b0b6e6083b3/nnunet-1.1.4-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,071 Found link https://files.pythonhosted.org/packages/76/9e/f6fe1fbfe942cefa2184a63ae5419b9dc31a063889f93969776f4bbf1adc/nnunet-1.1.4.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.4 2023-03-16T15:24:07,071 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/fb/b8/4c4d1660152a6ae77c5e12100ebe263a3bed759cef80fdbaf8e4f9455b1a/nnunet-1.1.4.1-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,072 Found link https://files.pythonhosted.org/packages/02/4c/d35823e65e15e163036376a7640aa537d00d68ffa9da1df0478a768b6c72/nnunet-1.1.4.1.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.4.1 2023-03-16T15:24:07,072 Found link https://files.pythonhosted.org/packages/ae/30/95df2b703ee5da13ac55ee92d9301e7b1a6b285412e56f225d8c82409652/nnunet-1.1.4.3.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.1.4.3 2023-03-16T15:24:07,073 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/80/21/fdcfd654ca52d397af9c58cb1125cd91764946460aeceef0cee094d641d8/nnunet-1.5-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,074 Found link https://files.pythonhosted.org/packages/3b/d9/a9d12b894195a035cde2ae9ad66c4910e636a7a0c12ebae1ecc0ed7bee3e/nnunet-1.5.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.5 2023-03-16T15:24:07,074 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/4d/c6/02a6b8977c5cb829616fa52d7e708040c597759fefa58559243b6d401631/nnunet-1.6.2-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,075 Found link https://files.pythonhosted.org/packages/be/3e/f26155cc194c787c63b0cccb32ffda73ccfc312120749cb85fa08b054353/nnunet-1.6.2.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.6.2 2023-03-16T15:24:07,075 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/29/ae/2450c04de56fb1e3958ab6f2743bac96f3ab77e8758f7556b804e77a0d15/nnunet-1.6.3-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,076 Found link https://files.pythonhosted.org/packages/73/38/b009f2f8557318d86a0e1b87f323355e9d56b1f910a2dfdb20e14d39e572/nnunet-1.6.3.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.6.3 2023-03-16T15:24:07,077 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/21/88/7e5f0760dc2fd3957adbd23de6574fcc02c736ce598a79db68626eb4a2e5/nnunet-1.6.4-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,077 Found link https://files.pythonhosted.org/packages/62/1b/1b1d3280208e44cca5db54d2b8ee93cdf04b57b140a7da20412cd839558b/nnunet-1.6.4.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.6.4 2023-03-16T15:24:07,078 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/07/07/eed143cb7873f6d22e5b85a97cb58c3ca3ad627139d62aa604022340a2e7/nnunet-1.6.5-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,079 Found link https://files.pythonhosted.org/packages/6f/ba/d7c377a1f56324bf227a4c887fe85754663eca38af2aee891af0ecf90905/nnunet-1.6.5.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.6.5 2023-03-16T15:24:07,079 Skipping link: No binaries permitted for nnunet: https://files.pythonhosted.org/packages/d2/52/4df99c42d7668e58a32e5a01382b02edc0c7404ed4740b76652f51fc4352/nnunet-1.6.6-py3-none-any.whl (from https://pypi.org/simple/nnunet/) 2023-03-16T15:24:07,080 Found link https://files.pythonhosted.org/packages/e7/41/18a5b3081960b7dd080c72d8e1857c37f61c1d694ba0de6f21160ac4ac38/nnunet-1.6.6.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.6.6 2023-03-16T15:24:07,080 Found link https://files.pythonhosted.org/packages/8e/cf/0e5a45faba472c1df80da8d3fcb8d90b31a2258e48fdbc47cd2e30c16233/nnunet-1.7.0.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.7.0 2023-03-16T15:24:07,081 Found link https://files.pythonhosted.org/packages/94/69/e924d5234eab1c7bdebef5a81c8dc23a2a7ebd61f19461a72ed8c4940980/nnunet-1.7.1.tar.gz (from https://pypi.org/simple/nnunet/), version: 1.7.1 2023-03-16T15:24:07,082 Fetching project page and analyzing links: https://www.piwheels.org/simple/nnunet/ 2023-03-16T15:24:07,083 Getting page https://www.piwheels.org/simple/nnunet/ 2023-03-16T15:24:07,085 Found index url https://www.piwheels.org/simple 2023-03-16T15:24:07,316 Fetched page https://www.piwheels.org/simple/nnunet/ as text/html 2023-03-16T15:24:07,333 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.7.0-py3-none-any.whl#sha256=2c943c6b337fa56f7f30c1d8054668a678b2ca718aade63868ea7a0e49e7b57d (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,334 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.6.6-py3-none-any.whl#sha256=a1502ae6d173883bf624a2f6af486d831c14682ea2caafe5a94e16ca9cd300c3 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,335 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.6.5-py3-none-any.whl#sha256=e7efe29b93dc80b0fa6f5ab48d7caca5b6f9fae54541e49710dafe94aa459526 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,335 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.6.4-py3-none-any.whl#sha256=74dfcd31d4ba055774f4b6b91c65b6c1ac3861cd3da953a38c792ca741034560 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,336 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.6.3-py3-none-any.whl#sha256=b0599e62e822a137f36ec1413d51ad98aa2318c3875a3a99f33b4c674bf82dac (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,336 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.6.2-py3-none-any.whl#sha256=7996e8691dfecfccaf3db9b2272bdc18b6151f27a09b32ad8e37ead2d8cc4155 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,337 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.5-py3-none-any.whl#sha256=373f29c7eec6acf37f99c8c9cee6ccb5c32e8f0c5d4df063eb292157405f7b94 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,337 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.4.3-py3-none-any.whl#sha256=4ad0b6be1d0222cbcae2160518a5ab9f04c1c27f58803726c54cbb12839bff16 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,338 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.4.1-py3-none-any.whl#sha256=735ea39134a4e258056e6c588b9aa4e1524481537e383a621e2a92fbbe0457e4 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,338 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.4-py3-none-any.whl#sha256=8e8072c44ba0cc687a94a2c5f464e688e876ef536d63c57578f946211df052a3 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,339 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.3-py3-none-any.whl#sha256=50d3b27f0fae75543b5fce26016854ef74f1710daf58a66f412e0d4031ec524b (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,339 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.2-py3-none-any.whl#sha256=95a8263183bd1e771bc1ec0ce9b0d0e36866da9454ee9b7dc9cc3b18edfca907 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,340 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1.1-py3-none-any.whl#sha256=aa95941f2c22e371c548d84973be1b5142d98dd62d84addce02b8b989f8285b5 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,340 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.1-py3-none-any.whl#sha256=0f5bb751476b7455f5f80de6b0c5e5324849958ca6ee59729cfc9af2649c62c3 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,341 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-1.0-py3-none-any.whl#sha256=12cf9e0fcf96535942472b5ba61ab60416b498616def38fc427eedc616632246 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,341 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.6-py3-none-any.whl#sha256=b1e809b632403f71aed23b779a7046f12c85504cbc48e5ec0f0269f9eb6b8690 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,342 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.5-py3-none-any.whl#sha256=6df8c801f0e2cc5495fbc0f4a0f97623494f94fa49998c23b401250081a38536 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,342 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.4-py3-none-any.whl#sha256=3e717902a67e870d23f0c841a9e05d773587ffcce69318e069f4b89f0068dd69 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,343 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.3-py3-none-any.whl#sha256=0a055b67c90cc88ed6ef0b3e078a3b225de26c43e4fd2add79877f491f3dfb3f (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,343 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.2-py3-none-any.whl#sha256=cfe81ff6e1a895ee1f0ca6bb9137990f85f1443d75d56d6a93fb9e8ddc667768 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,344 Skipping link: No binaries permitted for nnunet: https://www.piwheels.org/simple/nnunet/nnunet-0.1-py3-none-any.whl#sha256=d55bb9b93a201c459b0dcbb12a52e4b1d4fc32370dcd53b35d000173c1483ef7 (from https://www.piwheels.org/simple/nnunet/) 2023-03-16T15:24:07,345 Skipping link: not a file: https://www.piwheels.org/simple/nnunet/ 2023-03-16T15:24:07,345 Skipping link: not a file: https://pypi.org/simple/nnunet/ 2023-03-16T15:24:07,386 Given no hashes to check 1 links for project 'nnunet': discarding no candidates 2023-03-16T15:24:07,416 Collecting nnunet==1.7.1 2023-03-16T15:24:07,421 Created temporary directory: /tmp/pip-unpack-2gqi234z 2023-03-16T15:24:07,653 Downloading nnunet-1.7.1.tar.gz (276 kB) 2023-03-16T15:24:09,056 Added nnunet==1.7.1 from https://files.pythonhosted.org/packages/94/69/e924d5234eab1c7bdebef5a81c8dc23a2a7ebd61f19461a72ed8c4940980/nnunet-1.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-0x2rk__c' 2023-03-16T15:24:09,059 Running setup.py (path:/tmp/pip-wheel-ld7b0s1u/nnunet_6adde0bead224488b5258d416ad04244/setup.py) egg_info for package nnunet 2023-03-16T15:24:09,060 Created temporary directory: /tmp/pip-pip-egg-info-l0nod5oo 2023-03-16T15:24:09,061 Preparing metadata (setup.py): started 2023-03-16T15:24:09,063 Running command python setup.py egg_info 2023-03-16T15:24:10,571 running egg_info 2023-03-16T15:24:10,574 creating /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info 2023-03-16T15:24:10,627 writing /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/PKG-INFO 2023-03-16T15:24:10,632 writing dependency_links to /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/dependency_links.txt 2023-03-16T15:24:10,638 writing entry points to /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/entry_points.txt 2023-03-16T15:24:10,641 writing requirements to /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/requires.txt 2023-03-16T15:24:10,643 writing top-level names to /tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/top_level.txt 2023-03-16T15:24:10,646 writing manifest file '/tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/SOURCES.txt' 2023-03-16T15:24:10,903 reading manifest file '/tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/SOURCES.txt' 2023-03-16T15:24:10,906 adding license file 'LICENSE' 2023-03-16T15:24:10,938 writing manifest file '/tmp/pip-pip-egg-info-l0nod5oo/nnunet.egg-info/SOURCES.txt' 2023-03-16T15:24:10,941 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:791: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2023-03-16T15:24:10,941 % (opt, underscore_opt) 2023-03-16T15:24:11,057 Preparing metadata (setup.py): finished with status 'done' 2023-03-16T15:24:11,070 Source in /tmp/pip-wheel-ld7b0s1u/nnunet_6adde0bead224488b5258d416ad04244 has version 1.7.1, which satisfies requirement nnunet==1.7.1 from https://files.pythonhosted.org/packages/94/69/e924d5234eab1c7bdebef5a81c8dc23a2a7ebd61f19461a72ed8c4940980/nnunet-1.7.1.tar.gz 2023-03-16T15:24:11,072 Removed nnunet==1.7.1 from https://files.pythonhosted.org/packages/94/69/e924d5234eab1c7bdebef5a81c8dc23a2a7ebd61f19461a72ed8c4940980/nnunet-1.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-0x2rk__c' 2023-03-16T15:24:11,082 Created temporary directory: /tmp/pip-unpack-dwotmguv 2023-03-16T15:24:11,084 Building wheels for collected packages: nnunet 2023-03-16T15:24:11,093 Created temporary directory: /tmp/pip-wheel-y1_ljdip 2023-03-16T15:24:11,094 Building wheel for nnunet (setup.py): started 2023-03-16T15:24:11,096 Destination directory: /tmp/pip-wheel-y1_ljdip 2023-03-16T15:24:11,096 Running command python setup.py bdist_wheel 2023-03-16T15:24:12,274 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:791: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2023-03-16T15:24:12,275 % (opt, underscore_opt) 2023-03-16T15:24:13,045 running bdist_wheel 2023-03-16T15:24:13,211 running build 2023-03-16T15:24:13,211 running build_py 2023-03-16T15:24:13,272 creating build 2023-03-16T15:24:13,273 creating build/lib 2023-03-16T15:24:13,274 creating build/lib/nnunet 2023-03-16T15:24:13,278 copying nnunet/configuration.py -> build/lib/nnunet 2023-03-16T15:24:13,282 copying nnunet/paths.py -> build/lib/nnunet 2023-03-16T15:24:13,298 copying nnunet/__init__.py -> build/lib/nnunet 2023-03-16T15:24:13,303 creating build/lib/nnunet/inference 2023-03-16T15:24:13,305 copying nnunet/inference/predict_simple.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,310 copying nnunet/inference/predict.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,316 copying nnunet/inference/ensemble_predictions.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,320 copying nnunet/inference/__init__.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,324 copying nnunet/inference/change_trainer.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,327 copying nnunet/inference/segmentation_export.py -> build/lib/nnunet/inference 2023-03-16T15:24:13,333 creating build/lib/nnunet/run 2023-03-16T15:24:13,335 copying nnunet/run/run_training_DP.py -> build/lib/nnunet/run 2023-03-16T15:24:13,340 copying nnunet/run/run_training_DDP.py -> build/lib/nnunet/run 2023-03-16T15:24:13,345 copying nnunet/run/default_configuration.py -> build/lib/nnunet/run 2023-03-16T15:24:13,349 copying nnunet/run/load_pretrained_weights.py -> build/lib/nnunet/run 2023-03-16T15:24:13,352 copying nnunet/run/run_training.py -> build/lib/nnunet/run 2023-03-16T15:24:13,356 copying nnunet/run/__init__.py -> build/lib/nnunet/run 2023-03-16T15:24:13,362 creating build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,364 copying nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,370 copying nnunet/experiment_planning/nnUNet_plan_and_preprocess.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,374 copying nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,379 copying nnunet/experiment_planning/change_batch_size.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,382 copying nnunet/experiment_planning/DatasetAnalyzer.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,386 copying nnunet/experiment_planning/experiment_planner_baseline_2DUNet_v21.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,391 copying nnunet/experiment_planning/nnUNet_convert_decathlon_task.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,394 copying nnunet/experiment_planning/utils.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,399 copying nnunet/experiment_planning/__init__.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,402 copying nnunet/experiment_planning/common_utils.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,407 copying nnunet/experiment_planning/experiment_planner_baseline_3DUNet_v21.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,411 copying nnunet/experiment_planning/summarize_plans.py -> build/lib/nnunet/experiment_planning 2023-03-16T15:24:13,420 creating build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,422 copying nnunet/dataset_conversion/Task032_BraTS_2018.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,426 copying nnunet/dataset_conversion/Task076_Fluo_N3DH_SIM.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,431 copying nnunet/dataset_conversion/Task120_Massachusetts_RoadSegm.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,435 copying nnunet/dataset_conversion/Task037_038_Chaos_Challenge.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,440 copying nnunet/dataset_conversion/Task082_BraTS_2020.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,446 copying nnunet/dataset_conversion/Task056_Verse_normalize_orientation.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,450 copying nnunet/dataset_conversion/Task155_RibFrac_binary.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,454 copying nnunet/dataset_conversion/Task027_AutomaticCardiacDetectionChallenge.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,458 copying nnunet/dataset_conversion/Task115_COVIDSegChallenge.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,463 copying nnunet/dataset_conversion/Task159_MyoPS2020.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,467 copying nnunet/dataset_conversion/Task083_VerSe2020.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,471 copying nnunet/dataset_conversion/Task114_heart_MNMs.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,476 copying nnunet/dataset_conversion/Task218_HC18.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,479 copying nnunet/dataset_conversion/Task061_CREMI.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,483 copying nnunet/dataset_conversion/Task059_EPFL_EM_MITO_SEG.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,487 copying nnunet/dataset_conversion/Task156_RibSeg.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,492 copying nnunet/dataset_conversion/Task043_BraTS_2019.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,496 copying nnunet/dataset_conversion/Task058_ISBI_EM_SEG.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,500 copying nnunet/dataset_conversion/Task135_KiTS2021.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,504 copying nnunet/dataset_conversion/Task055_SegTHOR.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,508 copying nnunet/dataset_conversion/Task075_Fluo_C3DH_A549_ManAndSim.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,512 copying nnunet/dataset_conversion/Task029_LiverTumorSegmentationChallenge.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,516 copying nnunet/dataset_conversion/Task216_Amos2022_task1.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,520 copying nnunet/dataset_conversion/utils.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,523 copying nnunet/dataset_conversion/Task024_Promise2012.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,527 copying nnunet/dataset_conversion/Task064_KiTS_labelsFixed.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,530 copying nnunet/dataset_conversion/Task217_Amos2022_task2.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,534 copying nnunet/dataset_conversion/Task154_RibFrac_multi_label.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,539 copying nnunet/dataset_conversion/Task065_KiTS_NicksLabels.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,542 copying nnunet/dataset_conversion/__init__.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,546 copying nnunet/dataset_conversion/Task035_ISBI_MSLesionSegmentationChallenge.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,550 copying nnunet/dataset_conversion/Task040_KiTS.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,554 copying nnunet/dataset_conversion/Task069_CovidSeg.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,558 copying nnunet/dataset_conversion/Task089_Fluo-N2DH-SIM.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,563 copying nnunet/dataset_conversion/Task056_VerSe2019.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,567 copying nnunet/dataset_conversion/Task062_NIHPancreas.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,571 copying nnunet/dataset_conversion/Task017_BeyondCranialVaultAbdominalOrganSegmentation.py -> build/lib/nnunet/dataset_conversion 2023-03-16T15:24:13,576 creating build/lib/nnunet/preprocessing 2023-03-16T15:24:13,577 copying nnunet/preprocessing/sanity_checks.py -> build/lib/nnunet/preprocessing 2023-03-16T15:24:13,582 copying nnunet/preprocessing/preprocessing.py -> build/lib/nnunet/preprocessing 2023-03-16T15:24:13,588 copying nnunet/preprocessing/cropping.py -> build/lib/nnunet/preprocessing 2023-03-16T15:24:13,592 copying nnunet/preprocessing/__init__.py -> build/lib/nnunet/preprocessing 2023-03-16T15:24:13,604 creating build/lib/nnunet/utilities 2023-03-16T15:24:13,606 copying nnunet/utilities/recursive_rename_taskXX_to_taskXXX.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,611 copying nnunet/utilities/sitk_stuff.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,614 copying nnunet/utilities/set_n_proc_DA.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,618 copying nnunet/utilities/random_stuff.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,621 copying nnunet/utilities/recursive_delete_npz.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,625 copying nnunet/utilities/file_endings.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,628 copying nnunet/utilities/folder_names.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,632 copying nnunet/utilities/one_hot_encoding.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,635 copying nnunet/utilities/overlay_plots.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,640 copying nnunet/utilities/to_torch.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,643 copying nnunet/utilities/tensor_utilities.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,647 copying nnunet/utilities/distributed.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,650 copying nnunet/utilities/file_conversions.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,655 copying nnunet/utilities/image_reorientation.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,659 copying nnunet/utilities/__init__.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,663 copying nnunet/utilities/nd_softmax.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,666 copying nnunet/utilities/task_name_id_conversion.py -> build/lib/nnunet/utilities 2023-03-16T15:24:13,672 creating build/lib/nnunet/postprocessing 2023-03-16T15:24:13,674 copying nnunet/postprocessing/consolidate_postprocessing.py -> build/lib/nnunet/postprocessing 2023-03-16T15:24:13,678 copying nnunet/postprocessing/consolidate_postprocessing_simple.py -> build/lib/nnunet/postprocessing 2023-03-16T15:24:13,682 copying nnunet/postprocessing/consolidate_all_for_paper.py -> build/lib/nnunet/postprocessing 2023-03-16T15:24:13,685 copying nnunet/postprocessing/connected_components.py -> build/lib/nnunet/postprocessing 2023-03-16T15:24:13,690 copying nnunet/postprocessing/__init__.py -> build/lib/nnunet/postprocessing 2023-03-16T15:24:13,695 creating build/lib/nnunet/evaluation 2023-03-16T15:24:13,696 copying nnunet/evaluation/region_based_evaluation.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,701 copying nnunet/evaluation/evaluator.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,706 copying nnunet/evaluation/surface_dice.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,709 copying nnunet/evaluation/collect_results_files.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,713 copying nnunet/evaluation/add_mean_dice_to_json.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,716 copying nnunet/evaluation/__init__.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,720 copying nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,723 copying nnunet/evaluation/metrics.py -> build/lib/nnunet/evaluation 2023-03-16T15:24:13,730 creating build/lib/nnunet/network_architecture 2023-03-16T15:24:13,731 copying nnunet/network_architecture/generic_UNet.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,737 copying nnunet/network_architecture/generic_modular_residual_UNet.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,742 copying nnunet/network_architecture/generic_modular_preact_residual_UNet.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,747 copying nnunet/network_architecture/neural_network.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,753 copying nnunet/network_architecture/generic_UNet_DP.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,757 copying nnunet/network_architecture/__init__.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,761 copying nnunet/network_architecture/initialization.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,764 copying nnunet/network_architecture/generic_modular_UNet.py -> build/lib/nnunet/network_architecture 2023-03-16T15:24:13,770 creating build/lib/nnunet/training 2023-03-16T15:24:13,772 copying nnunet/training/model_restore.py -> build/lib/nnunet/training 2023-03-16T15:24:13,776 copying nnunet/training/__init__.py -> build/lib/nnunet/training 2023-03-16T15:24:13,781 creating build/lib/nnunet/inference/pretrained_models 2023-03-16T15:24:13,783 copying nnunet/inference/pretrained_models/collect_pretrained_models.py -> build/lib/nnunet/inference/pretrained_models 2023-03-16T15:24:13,787 copying nnunet/inference/pretrained_models/__init__.py -> build/lib/nnunet/inference/pretrained_models 2023-03-16T15:24:13,790 copying nnunet/inference/pretrained_models/download_pretrained_model.py -> build/lib/nnunet/inference/pretrained_models 2023-03-16T15:24:13,796 creating build/lib/nnunet/inference/amos2022 2023-03-16T15:24:13,798 copying nnunet/inference/amos2022/inference_code.py -> build/lib/nnunet/inference/amos2022 2023-03-16T15:24:13,803 copying nnunet/inference/amos2022/__init__.py -> build/lib/nnunet/inference/amos2022 2023-03-16T15:24:13,807 creating build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,810 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v22.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,813 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_11GB.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,817 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v23.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,821 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_32GB.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,825 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_16GB.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,830 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_3convperstage.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,833 copying nnunet/experiment_planning/alternative_experiment_planning/__init__.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,836 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_residual_3DUNet_v21.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,840 copying nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_pretrained.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:13,845 creating build/lib/nnunet/experiment_planning/task_specific_planner 2023-03-16T15:24:13,846 copying nnunet/experiment_planning/task_specific_planner/__init__.py -> build/lib/nnunet/experiment_planning/task_specific_planner 2023-03-16T15:24:13,851 creating build/lib/nnunet/experiment_planning/old 2023-03-16T15:24:13,853 copying nnunet/experiment_planning/old/old_plan_and_preprocess_task.py -> build/lib/nnunet/experiment_planning/old 2023-03-16T15:24:13,857 copying nnunet/experiment_planning/old/__init__.py -> build/lib/nnunet/experiment_planning/old 2023-03-16T15:24:13,862 creating build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:13,864 copying nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_customTargetSpacing_2x2x2.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:13,867 copying nnunet/experiment_planning/alternative_experiment_planning/target_spacing/__init__.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:13,870 copying nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_targetSpacingForAnisoAxis.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:13,874 copying nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_noResampling.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:13,880 creating build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:13,882 copying nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_mm.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:13,886 copying nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_voxels.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:13,890 copying nnunet/experiment_planning/alternative_experiment_planning/patch_size/__init__.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:13,894 creating build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:13,896 copying nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_nonCT.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:13,900 copying nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_2DUNet_v21_RGB_scaleto_0_1.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:13,904 copying nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_CT2.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:13,907 copying nnunet/experiment_planning/alternative_experiment_planning/normalization/__init__.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:13,912 creating build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:13,914 copying nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_poolBasedOnSpacing.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:13,918 copying nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/__init__.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:13,921 copying nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_allConv3x3.py -> build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:13,927 creating build/lib/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:13,929 copying nnunet/experiment_planning/task_specific_planner/amos2022/residual_bfnnunet_planner.py -> build/lib/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:13,933 copying nnunet/experiment_planning/task_specific_planner/amos2022/__init__.py -> build/lib/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:13,937 creating build/lib/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:13,939 copying nnunet/preprocessing/custom_preprocessors/__init__.py -> build/lib/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:13,942 copying nnunet/preprocessing/custom_preprocessors/preprocessor_scale_RGB_to_0_1.py -> build/lib/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:13,948 creating build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,950 copying nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,953 copying nnunet/evaluation/model_selection/summarize_results_with_plans.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,958 copying nnunet/evaluation/model_selection/summarize_results_in_one_json.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,962 copying nnunet/evaluation/model_selection/rank_candidates_StructSeg.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,966 copying nnunet/evaluation/model_selection/figure_out_what_to_submit.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,971 copying nnunet/evaluation/model_selection/__init__.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,974 copying nnunet/evaluation/model_selection/rank_candidates.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,980 copying nnunet/evaluation/model_selection/ensemble.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,984 copying nnunet/evaluation/model_selection/rank_candidates_cascade.py -> build/lib/nnunet/evaluation/model_selection 2023-03-16T15:24:13,990 creating build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:13,991 copying nnunet/network_architecture/custom_modules/helperModules.py -> build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:13,995 copying nnunet/network_architecture/custom_modules/__init__.py -> build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:13,998 copying nnunet/network_architecture/custom_modules/mish.py -> build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:14,002 copying nnunet/network_architecture/custom_modules/feature_response_normalization.py -> build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:14,005 copying nnunet/network_architecture/custom_modules/conv_blocks.py -> build/lib/nnunet/network_architecture/custom_modules 2023-03-16T15:24:14,012 creating build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,013 copying nnunet/training/loss_functions/deep_supervision.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,017 copying nnunet/training/loss_functions/focal_loss.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,022 copying nnunet/training/loss_functions/TopK_loss.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,025 copying nnunet/training/loss_functions/dice_loss.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,030 copying nnunet/training/loss_functions/__init__.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,033 copying nnunet/training/loss_functions/crossentropy.py -> build/lib/nnunet/training/loss_functions 2023-03-16T15:24:14,038 creating build/lib/nnunet/training/optimizer 2023-03-16T15:24:14,040 copying nnunet/training/optimizer/__init__.py -> build/lib/nnunet/training/optimizer 2023-03-16T15:24:14,043 copying nnunet/training/optimizer/ranger.py -> build/lib/nnunet/training/optimizer 2023-03-16T15:24:14,048 creating build/lib/nnunet/training/cascade_stuff 2023-03-16T15:24:14,050 copying nnunet/training/cascade_stuff/predict_next_stage.py -> build/lib/nnunet/training/cascade_stuff 2023-03-16T15:24:14,055 copying nnunet/training/cascade_stuff/__init__.py -> build/lib/nnunet/training/cascade_stuff 2023-03-16T15:24:14,060 creating build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,062 copying nnunet/training/data_augmentation/data_augmentation_moreDA.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,067 copying nnunet/training/data_augmentation/data_augmentation_insaneDA.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,071 copying nnunet/training/data_augmentation/custom_transforms.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,076 copying nnunet/training/data_augmentation/data_augmentation_noDA.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,080 copying nnunet/training/data_augmentation/data_augmentation_insaneDA2.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,084 copying nnunet/training/data_augmentation/downsampling.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,088 copying nnunet/training/data_augmentation/default_data_augmentation.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,093 copying nnunet/training/data_augmentation/__init__.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,096 copying nnunet/training/data_augmentation/pyramid_augmentations.py -> build/lib/nnunet/training/data_augmentation 2023-03-16T15:24:14,102 creating build/lib/nnunet/training/dataloading 2023-03-16T15:24:14,104 copying nnunet/training/dataloading/dataset_loading.py -> build/lib/nnunet/training/dataloading 2023-03-16T15:24:14,110 copying nnunet/training/dataloading/__init__.py -> build/lib/nnunet/training/dataloading 2023-03-16T15:24:14,114 creating build/lib/nnunet/training/learning_rate 2023-03-16T15:24:14,116 copying nnunet/training/learning_rate/poly_lr.py -> build/lib/nnunet/training/learning_rate 2023-03-16T15:24:14,120 copying nnunet/training/learning_rate/__init__.py -> build/lib/nnunet/training/learning_rate 2023-03-16T15:24:14,124 creating build/lib/nnunet/training/network_training 2023-03-16T15:24:14,126 copying nnunet/training/network_training/network_trainer.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,132 copying nnunet/training/network_training/nnUNetTrainerV2_fp32.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,135 copying nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,140 copying nnunet/training/network_training/nnUNetTrainerV2_DP.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,144 copying nnunet/training/network_training/nnUNetTrainer.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,150 copying nnunet/training/network_training/__init__.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,153 copying nnunet/training/network_training/nnUNetTrainerV2.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,158 copying nnunet/training/network_training/nnUNetTrainerV2_DDP.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,164 copying nnunet/training/network_training/nnUNetTrainerV2_CascadeFullRes.py -> build/lib/nnunet/training/network_training 2023-03-16T15:24:14,171 creating build/lib/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:14,172 copying nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py -> build/lib/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:14,176 copying nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py -> build/lib/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:14,180 copying nnunet/training/network_training/nnUNet_variants/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:14,184 creating build/lib/nnunet/training/network_training/competitions_with_custom_Trainers 2023-03-16T15:24:14,186 copying nnunet/training/network_training/competitions_with_custom_Trainers/__init__.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers 2023-03-16T15:24:14,191 creating build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,193 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceBD.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,197 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_CEGDL.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,200 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_CE.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,204 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,207 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceSD.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,211 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice_squared.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,214 copying nnunet/training/network_training/nnUNet_variants/loss_function/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,217 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice_lr1en3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,221 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_TopK10.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,224 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_DiceCE_noSmooth.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,228 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_focalLoss.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,231 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_MCC.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,235 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_graduallyTransitionFromCEToDice.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,239 copying nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_DiceTopK10.py -> build/lib/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:14,245 creating build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,247 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_reduceMomentumDuringTraining.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,251 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_fp16.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,254 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_ReduceOnPlateau.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,258 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_cycleAtEnd.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,261 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,265 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_lrs.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,268 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en4.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,272 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_warmup.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,275 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum095.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,279 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule2.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,282 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,286 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_lr_3en4.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,289 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum098.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,292 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,295 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_ReduceOnPlateau.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,299 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,302 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,306 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr1en2.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,310 copying nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09in2D.py -> build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:14,315 creating build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,317 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noDA.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,322 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA2.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,325 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noMirroring.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,329 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_insaneDA.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,333 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA5.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,338 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,341 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,346 copying nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_independentScalePerAxis.py -> build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:14,350 creating build/lib/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:14,352 copying nnunet/training/network_training/nnUNet_variants/copies/nnUNetTrainerV2_copies.py -> build/lib/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:14,356 copying nnunet/training/network_training/nnUNet_variants/copies/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:14,360 creating build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,362 copying nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_DAVariants.py -> build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,366 copying nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter_lowerLR.py -> build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,370 copying nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_lowerLR.py -> build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,373 copying nnunet/training/network_training/nnUNet_variants/cascade/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,376 copying nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter.py -> build/lib/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:14,381 creating build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:14,384 copying nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_2epochs.py -> build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:14,389 copying nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_dummyLoad.py -> build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:14,394 copying nnunet/training/network_training/nnUNet_variants/benchmarking/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:14,399 creating build/lib/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:14,401 copying nnunet/training/network_training/nnUNet_variants/miscellaneous/nnUNetTrainerV2_fullEvals.py -> build/lib/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:14,406 copying nnunet/training/network_training/nnUNet_variants/miscellaneous/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:14,411 creating build/lib/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:14,413 copying nnunet/training/network_training/nnUNet_variants/resampling/nnUNetTrainerV2_resample33.py -> build/lib/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:14,418 copying nnunet/training/network_training/nnUNet_variants/resampling/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:14,425 creating build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,428 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,432 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,436 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,440 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization_lr1en3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,444 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,448 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_softDeepSupervision.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,452 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_convReLUIN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,455 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_noDeepSupervision.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,460 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_convlReLUIN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,464 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_Mish.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,467 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit_DA5.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,472 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GeLU.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,476 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_LReLU_slope_2en1.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,480 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_biasInSegOutput.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,484 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,488 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_FRN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,492 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_BN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,495 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,499 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,503 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_biasInSegOutput.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,507 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3_BN.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,511 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_allConv3x3.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,514 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,518 copying nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage_samefilters.py -> build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:14,524 creating build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:14,526 copying nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions_moreDA.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:14,532 copying nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:14,537 copying nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/__init__.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:14,542 creating build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:14,544 copying nnunet/training/network_training/competitions_with_custom_Trainers/MMS/__init__.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:14,547 copying nnunet/training/network_training/competitions_with_custom_Trainers/MMS/nnUNetTrainerV2_MMS.py -> build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:14,693 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-16T15:24:14,693 setuptools.SetuptoolsDeprecationWarning, 2023-03-16T15:24:14,749 installing to build/bdist.linux-armv7l/wheel 2023-03-16T15:24:14,750 running install 2023-03-16T15:24:14,814 running install_lib 2023-03-16T15:24:14,880 creating build/bdist.linux-armv7l 2023-03-16T15:24:14,881 creating build/bdist.linux-armv7l/wheel 2023-03-16T15:24:14,885 creating build/bdist.linux-armv7l/wheel/nnunet 2023-03-16T15:24:14,888 creating build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,891 creating build/bdist.linux-armv7l/wheel/nnunet/inference/pretrained_models 2023-03-16T15:24:14,894 copying build/lib/nnunet/inference/pretrained_models/collect_pretrained_models.py -> build/bdist.linux-armv7l/wheel/nnunet/inference/pretrained_models 2023-03-16T15:24:14,899 copying build/lib/nnunet/inference/pretrained_models/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/inference/pretrained_models 2023-03-16T15:24:14,903 copying build/lib/nnunet/inference/pretrained_models/download_pretrained_model.py -> build/bdist.linux-armv7l/wheel/nnunet/inference/pretrained_models 2023-03-16T15:24:14,909 copying build/lib/nnunet/inference/predict_simple.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,914 copying build/lib/nnunet/inference/predict.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,922 copying build/lib/nnunet/inference/ensemble_predictions.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,928 creating build/bdist.linux-armv7l/wheel/nnunet/inference/amos2022 2023-03-16T15:24:14,931 copying build/lib/nnunet/inference/amos2022/inference_code.py -> build/bdist.linux-armv7l/wheel/nnunet/inference/amos2022 2023-03-16T15:24:14,936 copying build/lib/nnunet/inference/amos2022/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/inference/amos2022 2023-03-16T15:24:14,940 copying build/lib/nnunet/inference/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,944 copying build/lib/nnunet/inference/change_trainer.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,948 copying build/lib/nnunet/inference/segmentation_export.py -> build/bdist.linux-armv7l/wheel/nnunet/inference 2023-03-16T15:24:14,954 creating build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,957 copying build/lib/nnunet/run/run_training_DP.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,962 copying build/lib/nnunet/run/run_training_DDP.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,967 copying build/lib/nnunet/run/default_configuration.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,972 copying build/lib/nnunet/run/load_pretrained_weights.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,976 copying build/lib/nnunet/run/run_training.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,981 copying build/lib/nnunet/run/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/run 2023-03-16T15:24:14,986 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:14,989 copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:14,995 copying build/lib/nnunet/experiment_planning/nnUNet_plan_and_preprocess.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,001 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,004 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:15,007 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_customTargetSpacing_2x2x2.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:15,011 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:15,015 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_targetSpacingForAnisoAxis.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:15,019 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_noResampling.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/target_spacing 2023-03-16T15:24:15,024 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v22.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,028 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_11GB.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,033 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v23.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,037 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_32GB.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,041 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_16GB.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,046 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_3convperstage.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,052 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:15,054 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_mm.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:15,059 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_voxels.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:15,064 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/patch_size/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/patch_size 2023-03-16T15:24:15,069 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:15,071 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_nonCT.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:15,075 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_2DUNet_v21_RGB_scaleto_0_1.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:15,080 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_CT2.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:15,084 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/normalization 2023-03-16T15:24:15,088 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:15,091 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_poolBasedOnSpacing.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:15,096 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:15,099 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_allConv3x3.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs 2023-03-16T15:24:15,104 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,108 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_residual_3DUNet_v21.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,113 copying build/lib/nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_pretrained.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/alternative_experiment_planning 2023-03-16T15:24:15,117 copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,122 copying build/lib/nnunet/experiment_planning/change_batch_size.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,127 copying build/lib/nnunet/experiment_planning/DatasetAnalyzer.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,132 copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_2DUNet_v21.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,137 copying build/lib/nnunet/experiment_planning/nnUNet_convert_decathlon_task.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,142 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/task_specific_planner 2023-03-16T15:24:15,145 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:15,148 copying build/lib/nnunet/experiment_planning/task_specific_planner/amos2022/residual_bfnnunet_planner.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:15,153 copying build/lib/nnunet/experiment_planning/task_specific_planner/amos2022/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/task_specific_planner/amos2022 2023-03-16T15:24:15,157 copying build/lib/nnunet/experiment_planning/task_specific_planner/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/task_specific_planner 2023-03-16T15:24:15,161 creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/old 2023-03-16T15:24:15,164 copying build/lib/nnunet/experiment_planning/old/old_plan_and_preprocess_task.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/old 2023-03-16T15:24:15,169 copying build/lib/nnunet/experiment_planning/old/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning/old 2023-03-16T15:24:15,173 copying build/lib/nnunet/experiment_planning/utils.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,178 copying build/lib/nnunet/experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,182 copying build/lib/nnunet/experiment_planning/common_utils.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,186 copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_3DUNet_v21.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,191 copying build/lib/nnunet/experiment_planning/summarize_plans.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning 2023-03-16T15:24:15,197 creating build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,199 copying build/lib/nnunet/dataset_conversion/Task032_BraTS_2018.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,203 copying build/lib/nnunet/dataset_conversion/Task076_Fluo_N3DH_SIM.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,208 copying build/lib/nnunet/dataset_conversion/Task120_Massachusetts_RoadSegm.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,212 copying build/lib/nnunet/dataset_conversion/Task037_038_Chaos_Challenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,217 copying build/lib/nnunet/dataset_conversion/Task082_BraTS_2020.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,223 copying build/lib/nnunet/dataset_conversion/Task056_Verse_normalize_orientation.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,227 copying build/lib/nnunet/dataset_conversion/Task155_RibFrac_binary.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,231 copying build/lib/nnunet/dataset_conversion/Task027_AutomaticCardiacDetectionChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,235 copying build/lib/nnunet/dataset_conversion/Task115_COVIDSegChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,240 copying build/lib/nnunet/dataset_conversion/Task159_MyoPS2020.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,244 copying build/lib/nnunet/dataset_conversion/Task083_VerSe2020.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,248 copying build/lib/nnunet/dataset_conversion/Task114_heart_MNMs.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,253 copying build/lib/nnunet/dataset_conversion/Task218_HC18.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,256 copying build/lib/nnunet/dataset_conversion/Task061_CREMI.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,261 copying build/lib/nnunet/dataset_conversion/Task059_EPFL_EM_MITO_SEG.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,265 copying build/lib/nnunet/dataset_conversion/Task156_RibSeg.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,269 copying build/lib/nnunet/dataset_conversion/Task043_BraTS_2019.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,273 copying build/lib/nnunet/dataset_conversion/Task058_ISBI_EM_SEG.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,277 copying build/lib/nnunet/dataset_conversion/Task135_KiTS2021.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,281 copying build/lib/nnunet/dataset_conversion/Task055_SegTHOR.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,284 copying build/lib/nnunet/dataset_conversion/Task075_Fluo_C3DH_A549_ManAndSim.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,289 copying build/lib/nnunet/dataset_conversion/Task029_LiverTumorSegmentationChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,293 copying build/lib/nnunet/dataset_conversion/Task216_Amos2022_task1.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,296 copying build/lib/nnunet/dataset_conversion/utils.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,300 copying build/lib/nnunet/dataset_conversion/Task024_Promise2012.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,303 copying build/lib/nnunet/dataset_conversion/Task064_KiTS_labelsFixed.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,307 copying build/lib/nnunet/dataset_conversion/Task217_Amos2022_task2.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,311 copying build/lib/nnunet/dataset_conversion/Task154_RibFrac_multi_label.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,315 copying build/lib/nnunet/dataset_conversion/Task065_KiTS_NicksLabels.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,318 copying build/lib/nnunet/dataset_conversion/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,322 copying build/lib/nnunet/dataset_conversion/Task035_ISBI_MSLesionSegmentationChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,326 copying build/lib/nnunet/dataset_conversion/Task040_KiTS.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,330 copying build/lib/nnunet/dataset_conversion/Task069_CovidSeg.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,334 copying build/lib/nnunet/dataset_conversion/Task089_Fluo-N2DH-SIM.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,339 copying build/lib/nnunet/dataset_conversion/Task056_VerSe2019.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,343 copying build/lib/nnunet/dataset_conversion/Task062_NIHPancreas.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,347 copying build/lib/nnunet/dataset_conversion/Task017_BeyondCranialVaultAbdominalOrganSegmentation.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion 2023-03-16T15:24:15,350 copying build/lib/nnunet/configuration.py -> build/bdist.linux-armv7l/wheel/nnunet 2023-03-16T15:24:15,354 copying build/lib/nnunet/paths.py -> build/bdist.linux-armv7l/wheel/nnunet 2023-03-16T15:24:15,359 creating build/bdist.linux-armv7l/wheel/nnunet/preprocessing 2023-03-16T15:24:15,360 copying build/lib/nnunet/preprocessing/sanity_checks.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing 2023-03-16T15:24:15,366 creating build/bdist.linux-armv7l/wheel/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:15,368 copying build/lib/nnunet/preprocessing/custom_preprocessors/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:15,371 copying build/lib/nnunet/preprocessing/custom_preprocessors/preprocessor_scale_RGB_to_0_1.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing/custom_preprocessors 2023-03-16T15:24:15,375 copying build/lib/nnunet/preprocessing/preprocessing.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing 2023-03-16T15:24:15,382 copying build/lib/nnunet/preprocessing/cropping.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing 2023-03-16T15:24:15,386 copying build/lib/nnunet/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing 2023-03-16T15:24:15,391 creating build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,393 copying build/lib/nnunet/utilities/recursive_rename_taskXX_to_taskXXX.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,396 copying build/lib/nnunet/utilities/sitk_stuff.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,400 copying build/lib/nnunet/utilities/set_n_proc_DA.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,403 copying build/lib/nnunet/utilities/random_stuff.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,407 copying build/lib/nnunet/utilities/recursive_delete_npz.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,410 copying build/lib/nnunet/utilities/file_endings.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,414 copying build/lib/nnunet/utilities/folder_names.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,417 copying build/lib/nnunet/utilities/one_hot_encoding.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,421 copying build/lib/nnunet/utilities/overlay_plots.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,425 copying build/lib/nnunet/utilities/to_torch.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,429 copying build/lib/nnunet/utilities/tensor_utilities.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,432 copying build/lib/nnunet/utilities/distributed.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,436 copying build/lib/nnunet/utilities/file_conversions.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,440 copying build/lib/nnunet/utilities/image_reorientation.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,443 copying build/lib/nnunet/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,447 copying build/lib/nnunet/utilities/nd_softmax.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,451 copying build/lib/nnunet/utilities/task_name_id_conversion.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities 2023-03-16T15:24:15,454 copying build/lib/nnunet/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet 2023-03-16T15:24:15,459 creating build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,460 copying build/lib/nnunet/postprocessing/consolidate_postprocessing.py -> build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,464 copying build/lib/nnunet/postprocessing/consolidate_postprocessing_simple.py -> build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,468 copying build/lib/nnunet/postprocessing/consolidate_all_for_paper.py -> build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,471 copying build/lib/nnunet/postprocessing/connected_components.py -> build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,476 copying build/lib/nnunet/postprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/postprocessing 2023-03-16T15:24:15,480 creating build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,482 copying build/lib/nnunet/evaluation/region_based_evaluation.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,486 copying build/lib/nnunet/evaluation/evaluator.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,491 copying build/lib/nnunet/evaluation/surface_dice.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,495 copying build/lib/nnunet/evaluation/collect_results_files.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,498 copying build/lib/nnunet/evaluation/add_mean_dice_to_json.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,502 copying build/lib/nnunet/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,505 copying build/lib/nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,510 creating build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,511 copying build/lib/nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,515 copying build/lib/nnunet/evaluation/model_selection/summarize_results_with_plans.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,519 copying build/lib/nnunet/evaluation/model_selection/summarize_results_in_one_json.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,524 copying build/lib/nnunet/evaluation/model_selection/rank_candidates_StructSeg.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,528 copying build/lib/nnunet/evaluation/model_selection/figure_out_what_to_submit.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,533 copying build/lib/nnunet/evaluation/model_selection/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,536 copying build/lib/nnunet/evaluation/model_selection/rank_candidates.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,541 copying build/lib/nnunet/evaluation/model_selection/ensemble.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,545 copying build/lib/nnunet/evaluation/model_selection/rank_candidates_cascade.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection 2023-03-16T15:24:15,550 copying build/lib/nnunet/evaluation/metrics.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation 2023-03-16T15:24:15,556 creating build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,557 copying build/lib/nnunet/network_architecture/generic_UNet.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,563 copying build/lib/nnunet/network_architecture/generic_modular_residual_UNet.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,568 copying build/lib/nnunet/network_architecture/generic_modular_preact_residual_UNet.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,575 creating build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,577 copying build/lib/nnunet/network_architecture/custom_modules/helperModules.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,580 copying build/lib/nnunet/network_architecture/custom_modules/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,583 copying build/lib/nnunet/network_architecture/custom_modules/mish.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,587 copying build/lib/nnunet/network_architecture/custom_modules/feature_response_normalization.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,591 copying build/lib/nnunet/network_architecture/custom_modules/conv_blocks.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture/custom_modules 2023-03-16T15:24:15,595 copying build/lib/nnunet/network_architecture/neural_network.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,602 copying build/lib/nnunet/network_architecture/generic_UNet_DP.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,606 copying build/lib/nnunet/network_architecture/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,609 copying build/lib/nnunet/network_architecture/initialization.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,613 copying build/lib/nnunet/network_architecture/generic_modular_UNet.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture 2023-03-16T15:24:15,620 creating build/bdist.linux-armv7l/wheel/nnunet/training 2023-03-16T15:24:15,622 creating build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,624 copying build/lib/nnunet/training/loss_functions/deep_supervision.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,628 copying build/lib/nnunet/training/loss_functions/focal_loss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,632 copying build/lib/nnunet/training/loss_functions/TopK_loss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,636 copying build/lib/nnunet/training/loss_functions/dice_loss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,641 copying build/lib/nnunet/training/loss_functions/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,645 copying build/lib/nnunet/training/loss_functions/crossentropy.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions 2023-03-16T15:24:15,650 creating build/bdist.linux-armv7l/wheel/nnunet/training/optimizer 2023-03-16T15:24:15,651 copying build/lib/nnunet/training/optimizer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/optimizer 2023-03-16T15:24:15,654 copying build/lib/nnunet/training/optimizer/ranger.py -> build/bdist.linux-armv7l/wheel/nnunet/training/optimizer 2023-03-16T15:24:15,660 creating build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff 2023-03-16T15:24:15,662 copying build/lib/nnunet/training/cascade_stuff/predict_next_stage.py -> build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff 2023-03-16T15:24:15,667 copying build/lib/nnunet/training/cascade_stuff/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff 2023-03-16T15:24:15,671 creating build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,673 copying build/lib/nnunet/training/data_augmentation/data_augmentation_moreDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,678 copying build/lib/nnunet/training/data_augmentation/data_augmentation_insaneDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,683 copying build/lib/nnunet/training/data_augmentation/custom_transforms.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,687 copying build/lib/nnunet/training/data_augmentation/data_augmentation_noDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,692 copying build/lib/nnunet/training/data_augmentation/data_augmentation_insaneDA2.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,696 copying build/lib/nnunet/training/data_augmentation/downsampling.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,701 copying build/lib/nnunet/training/data_augmentation/default_data_augmentation.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,705 copying build/lib/nnunet/training/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,710 copying build/lib/nnunet/training/data_augmentation/pyramid_augmentations.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation 2023-03-16T15:24:15,714 copying build/lib/nnunet/training/model_restore.py -> build/bdist.linux-armv7l/wheel/nnunet/training 2023-03-16T15:24:15,720 creating build/bdist.linux-armv7l/wheel/nnunet/training/dataloading 2023-03-16T15:24:15,722 copying build/lib/nnunet/training/dataloading/dataset_loading.py -> build/bdist.linux-armv7l/wheel/nnunet/training/dataloading 2023-03-16T15:24:15,728 copying build/lib/nnunet/training/dataloading/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/dataloading 2023-03-16T15:24:15,732 copying build/lib/nnunet/training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training 2023-03-16T15:24:15,737 creating build/bdist.linux-armv7l/wheel/nnunet/training/learning_rate 2023-03-16T15:24:15,739 copying build/lib/nnunet/training/learning_rate/poly_lr.py -> build/bdist.linux-armv7l/wheel/nnunet/training/learning_rate 2023-03-16T15:24:15,742 copying build/lib/nnunet/training/learning_rate/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/learning_rate 2023-03-16T15:24:15,747 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,748 copying build/lib/nnunet/training/network_training/network_trainer.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,755 copying build/lib/nnunet/training/network_training/nnUNetTrainerV2_fp32.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,758 copying build/lib/nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,763 copying build/lib/nnunet/training/network_training/nnUNetTrainerV2_DP.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,768 copying build/lib/nnunet/training/network_training/nnUNetTrainer.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:15,776 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:15,778 copying build/lib/nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:15,783 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,785 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceBD.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,789 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_CEGDL.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,793 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_CE.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,796 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,800 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceSD.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,803 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice_squared.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,807 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,810 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_Dice_lr1en3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,814 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_TopK10.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,817 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_DiceCE_noSmooth.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,821 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_focalLoss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,825 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_MCC.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,829 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_graduallyTransitionFromCEToDice.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,833 copying build/lib/nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_DiceTopK10.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/loss_function 2023-03-16T15:24:15,838 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,839 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_reduceMomentumDuringTraining.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,843 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_fp16.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,847 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_ReduceOnPlateau.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,851 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_cycleAtEnd.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,855 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,859 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_lrs.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,862 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en4.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,866 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_warmup.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,870 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum095.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,873 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule2.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,877 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,881 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_lr_3en4.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,884 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum098.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,888 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,891 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_ReduceOnPlateau.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,895 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,898 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,902 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr1en2.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,906 copying build/lib/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09in2D.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/optimizer_and_lr 2023-03-16T15:24:15,911 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,912 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,917 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA2.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,921 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noMirroring.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,925 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_insaneDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,929 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA5.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,934 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,937 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,942 copying build/lib/nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_independentScalePerAxis.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/data_augmentation 2023-03-16T15:24:15,946 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:15,948 copying build/lib/nnunet/training/network_training/nnUNet_variants/copies/nnUNetTrainerV2_copies.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:15,952 copying build/lib/nnunet/training/network_training/nnUNet_variants/copies/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/copies 2023-03-16T15:24:15,956 copying build/lib/nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:15,961 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,963 copying build/lib/nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_DAVariants.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,967 copying build/lib/nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter_lowerLR.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,971 copying build/lib/nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_lowerLR.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,975 copying build/lib/nnunet/training/network_training/nnUNet_variants/cascade/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,977 copying build/lib/nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/cascade 2023-03-16T15:24:15,982 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:15,984 copying build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_2epochs.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:15,989 copying build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_dummyLoad.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:15,994 copying build/lib/nnunet/training/network_training/nnUNet_variants/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/benchmarking 2023-03-16T15:24:15,998 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:16,000 copying build/lib/nnunet/training/network_training/nnUNet_variants/miscellaneous/nnUNetTrainerV2_fullEvals.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:16,005 copying build/lib/nnunet/training/network_training/nnUNet_variants/miscellaneous/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/miscellaneous 2023-03-16T15:24:16,008 copying build/lib/nnunet/training/network_training/nnUNet_variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants 2023-03-16T15:24:16,013 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:16,014 copying build/lib/nnunet/training/network_training/nnUNet_variants/resampling/nnUNetTrainerV2_resample33.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:16,018 copying build/lib/nnunet/training/network_training/nnUNet_variants/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/resampling 2023-03-16T15:24:16,024 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,025 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,031 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,035 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,039 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization_lr1en3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,043 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,047 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_softDeepSupervision.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,052 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_convReLUIN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,056 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_noDeepSupervision.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,060 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_convlReLUIN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,064 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_Mish.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,068 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit_DA5.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,073 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GeLU.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,078 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_LReLU_slope_2en1.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,082 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_biasInSegOutput.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,085 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,089 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_FRN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,093 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_BN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,097 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,100 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,104 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_biasInSegOutput.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,107 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3_BN.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,112 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_allConv3x3.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,115 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,119 copying build/lib/nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage_samefilters.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants/architectural_variants 2023-03-16T15:24:16,123 copying build/lib/nnunet/training/network_training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:16,128 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers 2023-03-16T15:24:16,131 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:16,133 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions_moreDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:16,138 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:16,144 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020 2023-03-16T15:24:16,148 creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:16,150 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/MMS/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:16,154 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/MMS/nnUNetTrainerV2_MMS.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers/MMS 2023-03-16T15:24:16,157 copying build/lib/nnunet/training/network_training/competitions_with_custom_Trainers/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/competitions_with_custom_Trainers 2023-03-16T15:24:16,161 copying build/lib/nnunet/training/network_training/nnUNetTrainerV2.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:16,166 copying build/lib/nnunet/training/network_training/nnUNetTrainerV2_DDP.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:16,172 copying build/lib/nnunet/training/network_training/nnUNetTrainerV2_CascadeFullRes.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training 2023-03-16T15:24:16,176 running install_egg_info 2023-03-16T15:24:16,320 running egg_info 2023-03-16T15:24:16,373 writing nnunet.egg-info/PKG-INFO 2023-03-16T15:24:16,377 writing dependency_links to nnunet.egg-info/dependency_links.txt 2023-03-16T15:24:16,383 writing entry points to nnunet.egg-info/entry_points.txt 2023-03-16T15:24:16,386 writing requirements to nnunet.egg-info/requires.txt 2023-03-16T15:24:16,388 writing top-level names to nnunet.egg-info/top_level.txt 2023-03-16T15:24:16,528 reading manifest file 'nnunet.egg-info/SOURCES.txt' 2023-03-16T15:24:16,550 adding license file 'LICENSE' 2023-03-16T15:24:16,594 writing manifest file 'nnunet.egg-info/SOURCES.txt' 2023-03-16T15:24:16,598 Copying nnunet.egg-info to build/bdist.linux-armv7l/wheel/nnunet-1.7.1-py3.7.egg-info 2023-03-16T15:24:16,623 running install_scripts 2023-03-16T15:24:16,665 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-03-16T15:24:16,675 creating build/bdist.linux-armv7l/wheel/nnunet-1.7.1.dist-info/WHEEL 2023-03-16T15:24:16,679 creating '/tmp/pip-wheel-y1_ljdip/nnunet-1.7.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-16T15:24:16,684 adding 'nnunet/__init__.py' 2023-03-16T15:24:16,687 adding 'nnunet/configuration.py' 2023-03-16T15:24:16,690 adding 'nnunet/paths.py' 2023-03-16T15:24:16,695 adding 'nnunet/dataset_conversion/Task017_BeyondCranialVaultAbdominalOrganSegmentation.py' 2023-03-16T15:24:16,698 adding 'nnunet/dataset_conversion/Task024_Promise2012.py' 2023-03-16T15:24:16,702 adding 'nnunet/dataset_conversion/Task027_AutomaticCardiacDetectionChallenge.py' 2023-03-16T15:24:16,705 adding 'nnunet/dataset_conversion/Task029_LiverTumorSegmentationChallenge.py' 2023-03-16T15:24:16,708 adding 'nnunet/dataset_conversion/Task032_BraTS_2018.py' 2023-03-16T15:24:16,712 adding 'nnunet/dataset_conversion/Task035_ISBI_MSLesionSegmentationChallenge.py' 2023-03-16T15:24:16,717 adding 'nnunet/dataset_conversion/Task037_038_Chaos_Challenge.py' 2023-03-16T15:24:16,722 adding 'nnunet/dataset_conversion/Task040_KiTS.py' 2023-03-16T15:24:16,725 adding 'nnunet/dataset_conversion/Task043_BraTS_2019.py' 2023-03-16T15:24:16,728 adding 'nnunet/dataset_conversion/Task055_SegTHOR.py' 2023-03-16T15:24:16,732 adding 'nnunet/dataset_conversion/Task056_VerSe2019.py' 2023-03-16T15:24:16,736 adding 'nnunet/dataset_conversion/Task056_Verse_normalize_orientation.py' 2023-03-16T15:24:16,739 adding 'nnunet/dataset_conversion/Task058_ISBI_EM_SEG.py' 2023-03-16T15:24:16,742 adding 'nnunet/dataset_conversion/Task059_EPFL_EM_MITO_SEG.py' 2023-03-16T15:24:16,746 adding 'nnunet/dataset_conversion/Task061_CREMI.py' 2023-03-16T15:24:16,749 adding 'nnunet/dataset_conversion/Task062_NIHPancreas.py' 2023-03-16T15:24:16,752 adding 'nnunet/dataset_conversion/Task064_KiTS_labelsFixed.py' 2023-03-16T15:24:16,755 adding 'nnunet/dataset_conversion/Task065_KiTS_NicksLabels.py' 2023-03-16T15:24:16,758 adding 'nnunet/dataset_conversion/Task069_CovidSeg.py' 2023-03-16T15:24:16,761 adding 'nnunet/dataset_conversion/Task075_Fluo_C3DH_A549_ManAndSim.py' 2023-03-16T15:24:16,766 adding 'nnunet/dataset_conversion/Task076_Fluo_N3DH_SIM.py' 2023-03-16T15:24:16,775 adding 'nnunet/dataset_conversion/Task082_BraTS_2020.py' 2023-03-16T15:24:16,779 adding 'nnunet/dataset_conversion/Task083_VerSe2020.py' 2023-03-16T15:24:16,783 adding 'nnunet/dataset_conversion/Task089_Fluo-N2DH-SIM.py' 2023-03-16T15:24:16,788 adding 'nnunet/dataset_conversion/Task114_heart_MNMs.py' 2023-03-16T15:24:16,793 adding 'nnunet/dataset_conversion/Task115_COVIDSegChallenge.py' 2023-03-16T15:24:16,797 adding 'nnunet/dataset_conversion/Task120_Massachusetts_RoadSegm.py' 2023-03-16T15:24:16,800 adding 'nnunet/dataset_conversion/Task135_KiTS2021.py' 2023-03-16T15:24:16,803 adding 'nnunet/dataset_conversion/Task154_RibFrac_multi_label.py' 2023-03-16T15:24:16,807 adding 'nnunet/dataset_conversion/Task155_RibFrac_binary.py' 2023-03-16T15:24:16,810 adding 'nnunet/dataset_conversion/Task156_RibSeg.py' 2023-03-16T15:24:16,813 adding 'nnunet/dataset_conversion/Task159_MyoPS2020.py' 2023-03-16T15:24:16,816 adding 'nnunet/dataset_conversion/Task216_Amos2022_task1.py' 2023-03-16T15:24:16,819 adding 'nnunet/dataset_conversion/Task217_Amos2022_task2.py' 2023-03-16T15:24:16,822 adding 'nnunet/dataset_conversion/Task218_HC18.py' 2023-03-16T15:24:16,824 adding 'nnunet/dataset_conversion/__init__.py' 2023-03-16T15:24:16,827 adding 'nnunet/dataset_conversion/utils.py' 2023-03-16T15:24:16,831 adding 'nnunet/evaluation/__init__.py' 2023-03-16T15:24:16,834 adding 'nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py' 2023-03-16T15:24:16,837 adding 'nnunet/evaluation/add_mean_dice_to_json.py' 2023-03-16T15:24:16,840 adding 'nnunet/evaluation/collect_results_files.py' 2023-03-16T15:24:16,846 adding 'nnunet/evaluation/evaluator.py' 2023-03-16T15:24:16,850 adding 'nnunet/evaluation/metrics.py' 2023-03-16T15:24:16,853 adding 'nnunet/evaluation/region_based_evaluation.py' 2023-03-16T15:24:16,856 adding 'nnunet/evaluation/surface_dice.py' 2023-03-16T15:24:16,860 adding 'nnunet/evaluation/model_selection/__init__.py' 2023-03-16T15:24:16,863 adding 'nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py' 2023-03-16T15:24:16,866 adding 'nnunet/evaluation/model_selection/ensemble.py' 2023-03-16T15:24:16,871 adding 'nnunet/evaluation/model_selection/figure_out_what_to_submit.py' 2023-03-16T15:24:16,875 adding 'nnunet/evaluation/model_selection/rank_candidates.py' 2023-03-16T15:24:16,879 adding 'nnunet/evaluation/model_selection/rank_candidates_StructSeg.py' 2023-03-16T15:24:16,883 adding 'nnunet/evaluation/model_selection/rank_candidates_cascade.py' 2023-03-16T15:24:16,887 adding 'nnunet/evaluation/model_selection/summarize_results_in_one_json.py' 2023-03-16T15:24:16,891 adding 'nnunet/evaluation/model_selection/summarize_results_with_plans.py' 2023-03-16T15:24:16,897 adding 'nnunet/experiment_planning/DatasetAnalyzer.py' 2023-03-16T15:24:16,899 adding 'nnunet/experiment_planning/__init__.py' 2023-03-16T15:24:16,902 adding 'nnunet/experiment_planning/change_batch_size.py' 2023-03-16T15:24:16,906 adding 'nnunet/experiment_planning/common_utils.py' 2023-03-16T15:24:16,910 adding 'nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py' 2023-03-16T15:24:16,913 adding 'nnunet/experiment_planning/experiment_planner_baseline_2DUNet_v21.py' 2023-03-16T15:24:16,920 adding 'nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py' 2023-03-16T15:24:16,925 adding 'nnunet/experiment_planning/experiment_planner_baseline_3DUNet_v21.py' 2023-03-16T15:24:16,928 adding 'nnunet/experiment_planning/nnUNet_convert_decathlon_task.py' 2023-03-16T15:24:16,933 adding 'nnunet/experiment_planning/nnUNet_plan_and_preprocess.py' 2023-03-16T15:24:16,936 adding 'nnunet/experiment_planning/summarize_plans.py' 2023-03-16T15:24:16,940 adding 'nnunet/experiment_planning/utils.py' 2023-03-16T15:24:16,944 adding 'nnunet/experiment_planning/alternative_experiment_planning/__init__.py' 2023-03-16T15:24:16,947 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_11GB.py' 2023-03-16T15:24:16,951 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_16GB.py' 2023-03-16T15:24:16,955 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_32GB.py' 2023-03-16T15:24:16,957 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v21_3convperstage.py' 2023-03-16T15:24:16,961 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v22.py' 2023-03-16T15:24:16,963 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_baseline_3DUNet_v23.py' 2023-03-16T15:24:16,966 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_pretrained.py' 2023-03-16T15:24:16,969 adding 'nnunet/experiment_planning/alternative_experiment_planning/experiment_planner_residual_3DUNet_v21.py' 2023-03-16T15:24:16,973 adding 'nnunet/experiment_planning/alternative_experiment_planning/normalization/__init__.py' 2023-03-16T15:24:16,976 adding 'nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_2DUNet_v21_RGB_scaleto_0_1.py' 2023-03-16T15:24:16,979 adding 'nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_CT2.py' 2023-03-16T15:24:16,981 adding 'nnunet/experiment_planning/alternative_experiment_planning/normalization/experiment_planner_3DUNet_nonCT.py' 2023-03-16T15:24:16,985 adding 'nnunet/experiment_planning/alternative_experiment_planning/patch_size/__init__.py' 2023-03-16T15:24:16,988 adding 'nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_mm.py' 2023-03-16T15:24:16,992 adding 'nnunet/experiment_planning/alternative_experiment_planning/patch_size/experiment_planner_3DUNet_isotropic_in_voxels.py' 2023-03-16T15:24:16,995 adding 'nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/__init__.py' 2023-03-16T15:24:16,999 adding 'nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_allConv3x3.py' 2023-03-16T15:24:17,003 adding 'nnunet/experiment_planning/alternative_experiment_planning/pooling_and_convs/experiment_planner_baseline_3DUNet_poolBasedOnSpacing.py' 2023-03-16T15:24:17,006 adding 'nnunet/experiment_planning/alternative_experiment_planning/target_spacing/__init__.py' 2023-03-16T15:24:17,009 adding 'nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_targetSpacingForAnisoAxis.py' 2023-03-16T15:24:17,012 adding 'nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_customTargetSpacing_2x2x2.py' 2023-03-16T15:24:17,016 adding 'nnunet/experiment_planning/alternative_experiment_planning/target_spacing/experiment_planner_baseline_3DUNet_v21_noResampling.py' 2023-03-16T15:24:17,020 adding 'nnunet/experiment_planning/old/__init__.py' 2023-03-16T15:24:17,023 adding 'nnunet/experiment_planning/old/old_plan_and_preprocess_task.py' 2023-03-16T15:24:17,026 adding 'nnunet/experiment_planning/task_specific_planner/__init__.py' 2023-03-16T15:24:17,029 adding 'nnunet/experiment_planning/task_specific_planner/amos2022/__init__.py' 2023-03-16T15:24:17,033 adding 'nnunet/experiment_planning/task_specific_planner/amos2022/residual_bfnnunet_planner.py' 2023-03-16T15:24:17,037 adding 'nnunet/inference/__init__.py' 2023-03-16T15:24:17,040 adding 'nnunet/inference/change_trainer.py' 2023-03-16T15:24:17,043 adding 'nnunet/inference/ensemble_predictions.py' 2023-03-16T15:24:17,053 adding 'nnunet/inference/predict.py' 2023-03-16T15:24:17,059 adding 'nnunet/inference/predict_simple.py' 2023-03-16T15:24:17,063 adding 'nnunet/inference/segmentation_export.py' 2023-03-16T15:24:17,066 adding 'nnunet/inference/amos2022/__init__.py' 2023-03-16T15:24:17,071 adding 'nnunet/inference/amos2022/inference_code.py' 2023-03-16T15:24:17,074 adding 'nnunet/inference/pretrained_models/__init__.py' 2023-03-16T15:24:17,079 adding 'nnunet/inference/pretrained_models/collect_pretrained_models.py' 2023-03-16T15:24:17,085 adding 'nnunet/inference/pretrained_models/download_pretrained_model.py' 2023-03-16T15:24:17,089 adding 'nnunet/network_architecture/__init__.py' 2023-03-16T15:24:17,094 adding 'nnunet/network_architecture/generic_UNet.py' 2023-03-16T15:24:17,099 adding 'nnunet/network_architecture/generic_UNet_DP.py' 2023-03-16T15:24:17,104 adding 'nnunet/network_architecture/generic_modular_UNet.py' 2023-03-16T15:24:17,111 adding 'nnunet/network_architecture/generic_modular_preact_residual_UNet.py' 2023-03-16T15:24:17,117 adding 'nnunet/network_architecture/generic_modular_residual_UNet.py' 2023-03-16T15:24:17,120 adding 'nnunet/network_architecture/initialization.py' 2023-03-16T15:24:17,128 adding 'nnunet/network_architecture/neural_network.py' 2023-03-16T15:24:17,133 adding 'nnunet/network_architecture/custom_modules/__init__.py' 2023-03-16T15:24:17,137 adding 'nnunet/network_architecture/custom_modules/conv_blocks.py' 2023-03-16T15:24:17,140 adding 'nnunet/network_architecture/custom_modules/feature_response_normalization.py' 2023-03-16T15:24:17,142 adding 'nnunet/network_architecture/custom_modules/helperModules.py' 2023-03-16T15:24:17,145 adding 'nnunet/network_architecture/custom_modules/mish.py' 2023-03-16T15:24:17,148 adding 'nnunet/postprocessing/__init__.py' 2023-03-16T15:24:17,154 adding 'nnunet/postprocessing/connected_components.py' 2023-03-16T15:24:17,157 adding 'nnunet/postprocessing/consolidate_all_for_paper.py' 2023-03-16T15:24:17,160 adding 'nnunet/postprocessing/consolidate_postprocessing.py' 2023-03-16T15:24:17,163 adding 'nnunet/postprocessing/consolidate_postprocessing_simple.py' 2023-03-16T15:24:17,167 adding 'nnunet/preprocessing/__init__.py' 2023-03-16T15:24:17,170 adding 'nnunet/preprocessing/cropping.py' 2023-03-16T15:24:17,178 adding 'nnunet/preprocessing/preprocessing.py' 2023-03-16T15:24:17,184 adding 'nnunet/preprocessing/sanity_checks.py' 2023-03-16T15:24:17,188 adding 'nnunet/preprocessing/custom_preprocessors/__init__.py' 2023-03-16T15:24:17,191 adding 'nnunet/preprocessing/custom_preprocessors/preprocessor_scale_RGB_to_0_1.py' 2023-03-16T15:24:17,194 adding 'nnunet/run/__init__.py' 2023-03-16T15:24:17,197 adding 'nnunet/run/default_configuration.py' 2023-03-16T15:24:17,200 adding 'nnunet/run/load_pretrained_weights.py' 2023-03-16T15:24:17,204 adding 'nnunet/run/run_training.py' 2023-03-16T15:24:17,209 adding 'nnunet/run/run_training_DDP.py' 2023-03-16T15:24:17,213 adding 'nnunet/run/run_training_DP.py' 2023-03-16T15:24:17,217 adding 'nnunet/training/__init__.py' 2023-03-16T15:24:17,221 adding 'nnunet/training/model_restore.py' 2023-03-16T15:24:17,224 adding 'nnunet/training/cascade_stuff/__init__.py' 2023-03-16T15:24:17,228 adding 'nnunet/training/cascade_stuff/predict_next_stage.py' 2023-03-16T15:24:17,232 adding 'nnunet/training/data_augmentation/__init__.py' 2023-03-16T15:24:17,235 adding 'nnunet/training/data_augmentation/custom_transforms.py' 2023-03-16T15:24:17,239 adding 'nnunet/training/data_augmentation/data_augmentation_insaneDA.py' 2023-03-16T15:24:17,243 adding 'nnunet/training/data_augmentation/data_augmentation_insaneDA2.py' 2023-03-16T15:24:17,247 adding 'nnunet/training/data_augmentation/data_augmentation_moreDA.py' 2023-03-16T15:24:17,250 adding 'nnunet/training/data_augmentation/data_augmentation_noDA.py' 2023-03-16T15:24:17,255 adding 'nnunet/training/data_augmentation/default_data_augmentation.py' 2023-03-16T15:24:17,258 adding 'nnunet/training/data_augmentation/downsampling.py' 2023-03-16T15:24:17,262 adding 'nnunet/training/data_augmentation/pyramid_augmentations.py' 2023-03-16T15:24:17,266 adding 'nnunet/training/dataloading/__init__.py' 2023-03-16T15:24:17,273 adding 'nnunet/training/dataloading/dataset_loading.py' 2023-03-16T15:24:17,278 adding 'nnunet/training/learning_rate/__init__.py' 2023-03-16T15:24:17,280 adding 'nnunet/training/learning_rate/poly_lr.py' 2023-03-16T15:24:17,284 adding 'nnunet/training/loss_functions/TopK_loss.py' 2023-03-16T15:24:17,286 adding 'nnunet/training/loss_functions/__init__.py' 2023-03-16T15:24:17,289 adding 'nnunet/training/loss_functions/crossentropy.py' 2023-03-16T15:24:17,291 adding 'nnunet/training/loss_functions/deep_supervision.py' 2023-03-16T15:24:17,296 adding 'nnunet/training/loss_functions/dice_loss.py' 2023-03-16T15:24:17,299 adding 'nnunet/training/loss_functions/focal_loss.py' 2023-03-16T15:24:17,303 adding 'nnunet/training/network_training/__init__.py' 2023-03-16T15:24:17,312 adding 'nnunet/training/network_training/network_trainer.py' 2023-03-16T15:24:17,323 adding 'nnunet/training/network_training/nnUNetTrainer.py' 2023-03-16T15:24:17,329 adding 'nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py' 2023-03-16T15:24:17,335 adding 'nnunet/training/network_training/nnUNetTrainerV2.py' 2023-03-16T15:24:17,342 adding 'nnunet/training/network_training/nnUNetTrainerV2_CascadeFullRes.py' 2023-03-16T15:24:17,351 adding 'nnunet/training/network_training/nnUNetTrainerV2_DDP.py' 2023-03-16T15:24:17,356 adding 'nnunet/training/network_training/nnUNetTrainerV2_DP.py' 2023-03-16T15:24:17,359 adding 'nnunet/training/network_training/nnUNetTrainerV2_fp32.py' 2023-03-16T15:24:17,362 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/__init__.py' 2023-03-16T15:24:17,365 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/__init__.py' 2023-03-16T15:24:17,371 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions.py' 2023-03-16T15:24:17,376 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/BraTS2020/nnUNetTrainerV2BraTSRegions_moreDA.py' 2023-03-16T15:24:17,380 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/MMS/__init__.py' 2023-03-16T15:24:17,382 adding 'nnunet/training/network_training/competitions_with_custom_Trainers/MMS/nnUNetTrainerV2_MMS.py' 2023-03-16T15:24:17,386 adding 'nnunet/training/network_training/nnUNet_variants/__init__.py' 2023-03-16T15:24:17,389 adding 'nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py' 2023-03-16T15:24:17,392 adding 'nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py' 2023-03-16T15:24:17,397 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/__init__.py' 2023-03-16T15:24:17,399 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage.py' 2023-03-16T15:24:17,402 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_3ConvPerStage_samefilters.py' 2023-03-16T15:24:17,405 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_BN.py' 2023-03-16T15:24:17,408 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_FRN.py' 2023-03-16T15:24:17,411 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GN.py' 2023-03-16T15:24:17,414 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_GeLU.py' 2023-03-16T15:24:17,417 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_LReLU_slope_2en1.py' 2023-03-16T15:24:17,420 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_Mish.py' 2023-03-16T15:24:17,423 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization.py' 2023-03-16T15:24:17,426 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_NoNormalization_lr1en3.py' 2023-03-16T15:24:17,429 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU.py' 2023-03-16T15:24:17,432 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_biasInSegOutput.py' 2023-03-16T15:24:17,434 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ReLU_convReLUIN.py' 2023-03-16T15:24:17,438 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet.py' 2023-03-16T15:24:17,441 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3.py' 2023-03-16T15:24:17,444 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_DA3_BN.py' 2023-03-16T15:24:17,447 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit.py' 2023-03-16T15:24:17,452 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_ResencUNet_SimonsInit_DA5.py' 2023-03-16T15:24:17,456 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_allConv3x3.py' 2023-03-16T15:24:17,459 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_biasInSegOutput.py' 2023-03-16T15:24:17,462 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_lReLU_convlReLUIN.py' 2023-03-16T15:24:17,465 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_noDeepSupervision.py' 2023-03-16T15:24:17,469 adding 'nnunet/training/network_training/nnUNet_variants/architectural_variants/nnUNetTrainerV2_softDeepSupervision.py' 2023-03-16T15:24:17,473 adding 'nnunet/training/network_training/nnUNet_variants/benchmarking/__init__.py' 2023-03-16T15:24:17,476 adding 'nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_2epochs.py' 2023-03-16T15:24:17,480 adding 'nnunet/training/network_training/nnUNet_variants/benchmarking/nnUNetTrainerV2_dummyLoad.py' 2023-03-16T15:24:17,484 adding 'nnunet/training/network_training/nnUNet_variants/cascade/__init__.py' 2023-03-16T15:24:17,486 adding 'nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_DAVariants.py' 2023-03-16T15:24:17,489 adding 'nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_lowerLR.py' 2023-03-16T15:24:17,492 adding 'nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter.py' 2023-03-16T15:24:17,495 adding 'nnunet/training/network_training/nnUNet_variants/cascade/nnUNetTrainerV2CascadeFullRes_shorter_lowerLR.py' 2023-03-16T15:24:17,498 adding 'nnunet/training/network_training/nnUNet_variants/copies/__init__.py' 2023-03-16T15:24:17,501 adding 'nnunet/training/network_training/nnUNet_variants/copies/nnUNetTrainerV2_copies.py' 2023-03-16T15:24:17,505 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/__init__.py' 2023-03-16T15:24:17,508 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA2.py' 2023-03-16T15:24:17,512 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA3.py' 2023-03-16T15:24:17,517 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_DA5.py' 2023-03-16T15:24:17,520 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_independentScalePerAxis.py' 2023-03-16T15:24:17,524 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_insaneDA.py' 2023-03-16T15:24:17,527 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noDA.py' 2023-03-16T15:24:17,531 adding 'nnunet/training/network_training/nnUNet_variants/data_augmentation/nnUNetTrainerV2_noMirroring.py' 2023-03-16T15:24:17,535 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/__init__.py' 2023-03-16T15:24:17,537 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceBD.py' 2023-03-16T15:24:17,540 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_ForceSD.py' 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'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_MCC.py' 2023-03-16T15:24:17,565 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_Loss_TopK10.py' 2023-03-16T15:24:17,567 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_focalLoss.py' 2023-03-16T15:24:17,570 adding 'nnunet/training/network_training/nnUNet_variants/loss_function/nnUNetTrainerV2_graduallyTransitionFromCEToDice.py' 2023-03-16T15:24:17,574 adding 'nnunet/training/network_training/nnUNet_variants/miscellaneous/__init__.py' 2023-03-16T15:24:17,580 adding 'nnunet/training/network_training/nnUNet_variants/miscellaneous/nnUNetTrainerV2_fullEvals.py' 2023-03-16T15:24:17,584 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/__init__.py' 2023-03-16T15:24:17,586 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam.py' 2023-03-16T15:24:17,590 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_ReduceOnPlateau.py' 2023-03-16T15:24:17,592 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Adam_lr_3en4.py' 2023-03-16T15:24:17,595 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr1en2.py' 2023-03-16T15:24:17,597 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en3.py' 2023-03-16T15:24:17,600 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_Ranger_lr3en4.py' 2023-03-16T15:24:17,603 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_ReduceOnPlateau.py' 2023-03-16T15:24:17,606 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule.py' 2023-03-16T15:24:17,609 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_fixedSchedule2.py' 2023-03-16T15:24:17,612 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_SGD_lrs.py' 2023-03-16T15:24:17,615 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_cycleAtEnd.py' 2023-03-16T15:24:17,617 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_fp16.py' 2023-03-16T15:24:17,620 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09.py' 2023-03-16T15:24:17,623 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum095.py' 2023-03-16T15:24:17,625 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum098.py' 2023-03-16T15:24:17,628 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_momentum09in2D.py' 2023-03-16T15:24:17,631 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_reduceMomentumDuringTraining.py' 2023-03-16T15:24:17,634 adding 'nnunet/training/network_training/nnUNet_variants/optimizer_and_lr/nnUNetTrainerV2_warmup.py' 2023-03-16T15:24:17,637 adding 'nnunet/training/network_training/nnUNet_variants/resampling/__init__.py' 2023-03-16T15:24:17,640 adding 'nnunet/training/network_training/nnUNet_variants/resampling/nnUNetTrainerV2_resample33.py' 2023-03-16T15:24:17,643 adding 'nnunet/training/optimizer/__init__.py' 2023-03-16T15:24:17,647 adding 'nnunet/training/optimizer/ranger.py' 2023-03-16T15:24:17,651 adding 'nnunet/utilities/__init__.py' 2023-03-16T15:24:17,653 adding 'nnunet/utilities/distributed.py' 2023-03-16T15:24:17,657 adding 'nnunet/utilities/file_conversions.py' 2023-03-16T15:24:17,659 adding 'nnunet/utilities/file_endings.py' 2023-03-16T15:24:17,662 adding 'nnunet/utilities/folder_names.py' 2023-03-16T15:24:17,665 adding 'nnunet/utilities/image_reorientation.py' 2023-03-16T15:24:17,668 adding 'nnunet/utilities/nd_softmax.py' 2023-03-16T15:24:17,670 adding 'nnunet/utilities/one_hot_encoding.py' 2023-03-16T15:24:17,674 adding 'nnunet/utilities/overlay_plots.py' 2023-03-16T15:24:17,677 adding 'nnunet/utilities/random_stuff.py' 2023-03-16T15:24:17,679 adding 'nnunet/utilities/recursive_delete_npz.py' 2023-03-16T15:24:17,682 adding 'nnunet/utilities/recursive_rename_taskXX_to_taskXXX.py' 2023-03-16T15:24:17,685 adding 'nnunet/utilities/set_n_proc_DA.py' 2023-03-16T15:24:17,687 adding 'nnunet/utilities/sitk_stuff.py' 2023-03-16T15:24:17,690 adding 'nnunet/utilities/task_name_id_conversion.py' 2023-03-16T15:24:17,693 adding 'nnunet/utilities/tensor_utilities.py' 2023-03-16T15:24:17,695 adding 'nnunet/utilities/to_torch.py' 2023-03-16T15:24:17,703 adding 'nnunet-1.7.1.dist-info/LICENSE' 2023-03-16T15:24:17,705 adding 'nnunet-1.7.1.dist-info/METADATA' 2023-03-16T15:24:17,707 adding 'nnunet-1.7.1.dist-info/WHEEL' 2023-03-16T15:24:17,709 adding 'nnunet-1.7.1.dist-info/entry_points.txt' 2023-03-16T15:24:17,711 adding 'nnunet-1.7.1.dist-info/top_level.txt' 2023-03-16T15:24:17,720 adding 'nnunet-1.7.1.dist-info/RECORD' 2023-03-16T15:24:17,756 removing build/bdist.linux-armv7l/wheel 2023-03-16T15:24:18,061 Building wheel for nnunet (setup.py): finished with status 'done' 2023-03-16T15:24:18,084 Created wheel for nnunet: filename=nnunet-1.7.1-py3-none-any.whl size=531268 sha256=03199ba728a1b1681e5a3deb5de35ce7006f1f418b55bd005f56625fdd8fadc8 2023-03-16T15:24:18,086 Stored in directory: /tmp/pip-ephem-wheel-cache-vema7moc/wheels/9e/b4/a2/425c1b772f3eea4585ea9620b8e452de2614b6952305baf769 2023-03-16T15:24:18,136 Successfully built nnunet 2023-03-16T15:24:18,186 Removed build tracker: '/tmp/pip-build-tracker-0x2rk__c'