2023-03-21T07:21:47,717 Created temporary directory: /tmp/pip-ephem-wheel-cache-ggh31u9h 2023-03-21T07:21:47,723 Created temporary directory: /tmp/pip-build-tracker-c618n1do 2023-03-21T07:21:47,724 Initialized build tracking at /tmp/pip-build-tracker-c618n1do 2023-03-21T07:21:47,724 Created build tracker: /tmp/pip-build-tracker-c618n1do 2023-03-21T07:21:47,724 Entered build tracker: /tmp/pip-build-tracker-c618n1do 2023-03-21T07:21:47,726 Created temporary directory: /tmp/pip-wheel-q1b6yh9v 2023-03-21T07:21:47,736 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-21T07:21:47,742 Created temporary directory: /tmp/pip-ephem-wheel-cache-0kanius1 2023-03-21T07:21:47,803 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-21T07:21:47,809 2 location(s) to search for versions of genomicranges: 2023-03-21T07:21:47,809 * https://pypi.org/simple/genomicranges/ 2023-03-21T07:21:47,809 * https://www.piwheels.org/simple/genomicranges/ 2023-03-21T07:21:47,811 Fetching project page and analyzing links: https://pypi.org/simple/genomicranges/ 2023-03-21T07:21:47,812 Getting page https://pypi.org/simple/genomicranges/ 2023-03-21T07:21:47,816 Found index url https://pypi.org/simple 2023-03-21T07:21:48,054 Fetched page https://pypi.org/simple/genomicranges/ as application/vnd.pypi.simple.v1+json 2023-03-21T07:21:48,061 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/09/b1/66124bd9f9466a6670dd49719d48f75e2c8ee39ee62b845fe2281dd5129c/GenomicRanges-0.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,062 Found link https://files.pythonhosted.org/packages/f8/98/3e3203fd5e657991befa44e2dea23ec2df2c2b5573af9accdd3ddb7672b1/GenomicRanges-0.1.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.1 2023-03-21T07:21:48,063 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/31/29/8def5a85d78239bc4ece55984934faf89c0e0fa3afe7eddae7e83603d101/GenomicRanges-0.1.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,064 Found link https://files.pythonhosted.org/packages/fb/c1/73d2c384b0610a85e7024ba57860f4053dcf882b721f75bd4bbc880d1b7a/GenomicRanges-0.1.1.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.1.1 2023-03-21T07:21:48,064 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/77/06/ecbbfbbf9c95a2c5b94e87deceae9f4ab0bb5fd6b6719c0ba734b038fa82/GenomicRanges-0.2-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,065 Found link https://files.pythonhosted.org/packages/ab/ee/46554b3205b22dd5caf2c369f35f4e367c76a1860926f13f4bbf8ba633f7/GenomicRanges-0.2.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.2 2023-03-21T07:21:48,065 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/f4/70/e3b4d9d81b80db4ea608536aa2d08ef92b40b4d1657087156adaec6116bc/GenomicRanges-0.2.6-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,066 Found link https://files.pythonhosted.org/packages/a8/68/b26c7ecc01e37e11ebda181bc261128b64d9034729baf2c4b67bb6cd532c/GenomicRanges-0.2.6.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.2.6 2023-03-21T07:21:48,067 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/2a/9b/1b209bb9a64017d97994d867bbec3cc74071b2b5258b49cce150a28dea45/GenomicRanges-0.2.7-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,067 Found link https://files.pythonhosted.org/packages/7e/8a/5bff343ec2d7c7563e97977f9b157f50ed12fb4abd38d280802973f15866/GenomicRanges-0.2.7.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.2.7 2023-03-21T07:21:48,068 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/69/57/e8aa5eb8ad9d3d6d22d9d1005458ccdd6cce489e9b8fc3e4d3e8cf3842d2/GenomicRanges-0.2.8-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2023-03-21T07:21:48,068 Found link https://files.pythonhosted.org/packages/85/e3/6ac353ad06297035fba0c7d26f03d62ae31a0d30804a60e5a1bf9e9b8103/GenomicRanges-0.2.8.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.2.8 2023-03-21T07:21:48,069 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomicranges/ 2023-03-21T07:21:48,070 Getting page https://www.piwheels.org/simple/genomicranges/ 2023-03-21T07:21:48,072 Found index url https://www.piwheels.org/simple 2023-03-21T07:21:48,284 Fetched page https://www.piwheels.org/simple/genomicranges/ as text/html 2023-03-21T07:21:48,293 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2.7-py3-none-any.whl#sha256=708985949d6f680693bf3e0a9731e999f85d8d39b59c26514544543a46df46cf (from https://www.piwheels.org/simple/genomicranges/) 2023-03-21T07:21:48,294 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2.6-py3-none-any.whl#sha256=319269c9ff09b906843541695c9c9ab49813f2760549ffc9bc1aeb5f48cdbc7a (from https://www.piwheels.org/simple/genomicranges/) 2023-03-21T07:21:48,295 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2-py3-none-any.whl#sha256=13e5945ef21f2d062b6268ed8399dee27baa6e7f567898334ff5bce7f690c995 (from https://www.piwheels.org/simple/genomicranges/) 2023-03-21T07:21:48,295 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1.1-py3-none-any.whl#sha256=6728545e04f3d54afc4ef16ea9e031842e6a1d3db474b34c2dd7b0af700be3d6 (from https://www.piwheels.org/simple/genomicranges/) 2023-03-21T07:21:48,296 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1-py3-none-any.whl#sha256=d2109a9a366cf41f6ee4a8d33fd2c3ec02a2048d4fb5d7468801e434b6c1ee4c (from https://www.piwheels.org/simple/genomicranges/) 2023-03-21T07:21:48,296 Skipping link: not a file: https://www.piwheels.org/simple/genomicranges/ 2023-03-21T07:21:48,297 Skipping link: not a file: https://pypi.org/simple/genomicranges/ 2023-03-21T07:21:48,331 Given no hashes to check 1 links for project 'genomicranges': discarding no candidates 2023-03-21T07:21:48,360 Collecting genomicranges==0.2.8 2023-03-21T07:21:48,365 Created temporary directory: /tmp/pip-unpack-8b6u7wss 2023-03-21T07:21:48,592 Downloading GenomicRanges-0.2.8.tar.gz (46 kB) 2023-03-21T07:21:48,899 Added genomicranges==0.2.8 from https://files.pythonhosted.org/packages/85/e3/6ac353ad06297035fba0c7d26f03d62ae31a0d30804a60e5a1bf9e9b8103/GenomicRanges-0.2.8.tar.gz to build tracker '/tmp/pip-build-tracker-c618n1do' 2023-03-21T07:21:48,912 Created temporary directory: /tmp/pip-build-env-4gz8830r 2023-03-21T07:21:48,933 Installing build dependencies: started 2023-03-21T07:21:48,935 Running command pip subprocess to install build dependencies 2023-03-21T07:21:51,700 Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-03-21T07:21:52,893 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-21T07:21:52,954 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-21T07:21:56,869 Collecting setuptools>=46.1.0 2023-03-21T07:21:57,117 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.0-py3-none-any.whl (1.1 MB) 2023-03-21T07:21:58,091 Collecting setuptools_scm[toml]>=5 2023-03-21T07:21:58,162 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-03-21T07:21:58,698 Collecting wheel 2023-03-21T07:21:58,734 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-03-21T07:21:59,839 Collecting importlib-metadata 2023-03-21T07:21:59,903 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.1.0-py3-none-any.whl (21 kB) 2023-03-21T07:22:00,166 Collecting typing-extensions 2023-03-21T07:22:00,199 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.5.0-py3-none-any.whl (27 kB) 2023-03-21T07:22:00,629 Collecting packaging>=20.0 2023-03-21T07:22:00,684 Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB) 2023-03-21T07:22:00,983 Collecting tomli>=1.0.0 2023-03-21T07:22:01,019 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-03-21T07:22:02,698 Collecting zipp>=0.5 2023-03-21T07:22:02,833 Using cached https://www.piwheels.org/simple/zipp/zipp-3.15.0-py3-none-any.whl (6.8 kB) 2023-03-21T07:22:08,123 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2023-03-21T07:22:08,640 Creating /tmp/pip-build-env-4gz8830r/overlay/bin 2023-03-21T07:22:08,644 changing mode of /tmp/pip-build-env-4gz8830r/overlay/bin/wheel to 755 2023-03-21T07:22:13,894 Successfully installed importlib-metadata-6.1.0 packaging-23.0 setuptools-67.6.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.5.0 wheel-0.40.0 zipp-3.15.0 2023-03-21T07:22:14,903 Installing build dependencies: finished with status 'done' 2023-03-21T07:22:14,914 Getting requirements to build wheel: started 2023-03-21T07:22:14,916 Running command Getting requirements to build wheel 2023-03-21T07:22:16,727 running egg_info 2023-03-21T07:22:16,742 writing src/GenomicRanges.egg-info/PKG-INFO 2023-03-21T07:22:16,746 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2023-03-21T07:22:16,751 writing requirements to src/GenomicRanges.egg-info/requires.txt 2023-03-21T07:22:16,754 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2023-03-21T07:22:16,880 listing git files failed - pretending there aren't any 2023-03-21T07:22:16,915 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:16,926 adding license file 'LICENSE.txt' 2023-03-21T07:22:16,938 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:17,075 Getting requirements to build wheel: finished with status 'done' 2023-03-21T07:22:17,104 Created temporary directory: /tmp/pip-modern-metadata-if67ki2_ 2023-03-21T07:22:17,110 Preparing metadata (pyproject.toml): started 2023-03-21T07:22:17,112 Running command Preparing metadata (pyproject.toml) 2023-03-21T07:22:18,648 running dist_info 2023-03-21T07:22:18,693 creating /tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info 2023-03-21T07:22:18,707 writing /tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/PKG-INFO 2023-03-21T07:22:18,712 writing dependency_links to /tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/dependency_links.txt 2023-03-21T07:22:18,717 writing requirements to /tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/requires.txt 2023-03-21T07:22:18,719 writing top-level names to /tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/top_level.txt 2023-03-21T07:22:18,722 writing manifest file '/tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:18,842 listing git files failed - pretending there aren't any 2023-03-21T07:22:18,860 reading manifest file '/tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:18,867 adding license file 'LICENSE.txt' 2023-03-21T07:22:18,876 writing manifest file '/tmp/pip-modern-metadata-if67ki2_/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:18,878 creating '/tmp/pip-modern-metadata-if67ki2_/GenomicRanges-0.2.8.dist-info' 2023-03-21T07:22:19,221 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-21T07:22:19,235 Source in /tmp/pip-wheel-q1b6yh9v/genomicranges_d75a7f81490548cdba0a6287b8c13af6 has version 0.2.8, which satisfies requirement genomicranges==0.2.8 from https://files.pythonhosted.org/packages/85/e3/6ac353ad06297035fba0c7d26f03d62ae31a0d30804a60e5a1bf9e9b8103/GenomicRanges-0.2.8.tar.gz 2023-03-21T07:22:19,237 Removed genomicranges==0.2.8 from https://files.pythonhosted.org/packages/85/e3/6ac353ad06297035fba0c7d26f03d62ae31a0d30804a60e5a1bf9e9b8103/GenomicRanges-0.2.8.tar.gz from build tracker '/tmp/pip-build-tracker-c618n1do' 2023-03-21T07:22:19,247 Created temporary directory: /tmp/pip-unpack-8193zs0n 2023-03-21T07:22:19,248 Building wheels for collected packages: genomicranges 2023-03-21T07:22:19,257 Created temporary directory: /tmp/pip-wheel-h6u26lil 2023-03-21T07:22:19,258 Destination directory: /tmp/pip-wheel-h6u26lil 2023-03-21T07:22:19,263 Building wheel for genomicranges (pyproject.toml): started 2023-03-21T07:22:19,266 Running command Building wheel for genomicranges (pyproject.toml) 2023-03-21T07:22:20,889 running bdist_wheel 2023-03-21T07:22:20,981 running build 2023-03-21T07:22:20,981 running build_py 2023-03-21T07:22:21,003 creating build 2023-03-21T07:22:21,004 creating build/lib 2023-03-21T07:22:21,005 creating build/lib/genomicranges 2023-03-21T07:22:21,008 copying src/genomicranges/utils.py -> build/lib/genomicranges 2023-03-21T07:22:21,013 copying src/genomicranges/SeqInfo.py -> build/lib/genomicranges 2023-03-21T07:22:21,016 copying src/genomicranges/__init__.py -> build/lib/genomicranges 2023-03-21T07:22:21,020 copying src/genomicranges/GenomicRanges.py -> build/lib/genomicranges 2023-03-21T07:22:21,037 copying src/genomicranges/_utils.py -> build/lib/genomicranges 2023-03-21T07:22:21,043 creating build/lib/genomicranges/io 2023-03-21T07:22:21,045 copying src/genomicranges/io/ucsc.py -> build/lib/genomicranges/io 2023-03-21T07:22:21,048 copying src/genomicranges/io/tiling.py -> build/lib/genomicranges/io 2023-03-21T07:22:21,052 copying src/genomicranges/io/gtf.py -> build/lib/genomicranges/io 2023-03-21T07:22:21,055 copying src/genomicranges/io/pdf.py -> build/lib/genomicranges/io 2023-03-21T07:22:21,059 copying src/genomicranges/io/__init__.py -> build/lib/genomicranges/io 2023-03-21T07:22:21,062 running egg_info 2023-03-21T07:22:21,110 writing src/GenomicRanges.egg-info/PKG-INFO 2023-03-21T07:22:21,113 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2023-03-21T07:22:21,117 writing requirements to src/GenomicRanges.egg-info/requires.txt 2023-03-21T07:22:21,119 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2023-03-21T07:22:21,203 listing git files failed - pretending there aren't any 2023-03-21T07:22:21,222 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:21,230 adding license file 'LICENSE.txt' 2023-03-21T07:22:21,242 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2023-03-21T07:22:21,296 installing to build/bdist.linux-armv7l/wheel 2023-03-21T07:22:21,297 running install 2023-03-21T07:22:21,358 running install_lib 2023-03-21T07:22:21,377 creating build/bdist.linux-armv7l 2023-03-21T07:22:21,378 creating build/bdist.linux-armv7l/wheel 2023-03-21T07:22:21,381 creating build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,384 creating build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,386 copying build/lib/genomicranges/io/ucsc.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,391 copying build/lib/genomicranges/io/tiling.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,394 copying build/lib/genomicranges/io/gtf.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,398 copying build/lib/genomicranges/io/pdf.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,401 copying build/lib/genomicranges/io/__init__.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2023-03-21T07:22:21,405 copying build/lib/genomicranges/utils.py -> build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,410 copying build/lib/genomicranges/SeqInfo.py -> build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,414 copying build/lib/genomicranges/__init__.py -> build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,418 copying build/lib/genomicranges/GenomicRanges.py -> build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,426 copying build/lib/genomicranges/_utils.py -> build/bdist.linux-armv7l/wheel/genomicranges 2023-03-21T07:22:21,430 running install_egg_info 2023-03-21T07:22:21,451 Copying src/GenomicRanges.egg-info to build/bdist.linux-armv7l/wheel/GenomicRanges-0.2.8-py3.7.egg-info 2023-03-21T07:22:21,473 running install_scripts 2023-03-21T07:22:21,509 creating build/bdist.linux-armv7l/wheel/GenomicRanges-0.2.8.dist-info/WHEEL 2023-03-21T07:22:21,514 creating '/tmp/pip-wheel-h6u26lil/.tmp-kiyd_zhm/GenomicRanges-0.2.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-21T07:22:21,537 adding 'genomicranges/GenomicRanges.py' 2023-03-21T07:22:21,542 adding 'genomicranges/SeqInfo.py' 2023-03-21T07:22:21,544 adding 'genomicranges/__init__.py' 2023-03-21T07:22:21,548 adding 'genomicranges/_utils.py' 2023-03-21T07:22:21,554 adding 'genomicranges/utils.py' 2023-03-21T07:22:21,558 adding 'genomicranges/io/__init__.py' 2023-03-21T07:22:21,560 adding 'genomicranges/io/gtf.py' 2023-03-21T07:22:21,563 adding 'genomicranges/io/pdf.py' 2023-03-21T07:22:21,566 adding 'genomicranges/io/tiling.py' 2023-03-21T07:22:21,568 adding 'genomicranges/io/ucsc.py' 2023-03-21T07:22:21,570 adding 'GenomicRanges-0.2.8.dist-info/LICENSE.txt' 2023-03-21T07:22:21,573 adding 'GenomicRanges-0.2.8.dist-info/METADATA' 2023-03-21T07:22:21,575 adding 'GenomicRanges-0.2.8.dist-info/WHEEL' 2023-03-21T07:22:21,577 adding 'GenomicRanges-0.2.8.dist-info/top_level.txt' 2023-03-21T07:22:21,579 adding 'GenomicRanges-0.2.8.dist-info/RECORD' 2023-03-21T07:22:21,582 removing build/bdist.linux-armv7l/wheel 2023-03-21T07:22:21,747 Building wheel for genomicranges (pyproject.toml): finished with status 'done' 2023-03-21T07:22:21,761 Created wheel for genomicranges: filename=GenomicRanges-0.2.8-py3-none-any.whl size=26644 sha256=42e4e909776464a152ea9dcfc35151bc640b422400c40b9a0c545c00bab439cc 2023-03-21T07:22:21,763 Stored in directory: /tmp/pip-ephem-wheel-cache-0kanius1/wheels/78/6f/5f/2fba5b8554b243aa4d14ded126a276249c3b6bc41fc54b3a67 2023-03-21T07:22:21,789 Successfully built genomicranges 2023-03-21T07:22:21,798 Removed build tracker: '/tmp/pip-build-tracker-c618n1do'