2023-03-23T08:21:29,725 Created temporary directory: /tmp/pip-ephem-wheel-cache-km3mngq8 2023-03-23T08:21:29,728 Created temporary directory: /tmp/pip-build-tracker-5etu5cz1 2023-03-23T08:21:29,728 Initialized build tracking at /tmp/pip-build-tracker-5etu5cz1 2023-03-23T08:21:29,729 Created build tracker: /tmp/pip-build-tracker-5etu5cz1 2023-03-23T08:21:29,729 Entered build tracker: /tmp/pip-build-tracker-5etu5cz1 2023-03-23T08:21:29,729 Created temporary directory: /tmp/pip-wheel-8zmhtqz7 2023-03-23T08:21:29,734 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-23T08:21:29,737 Created temporary directory: /tmp/pip-ephem-wheel-cache-v9atxifb 2023-03-23T08:21:29,762 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-23T08:21:29,765 2 location(s) to search for versions of funid: 2023-03-23T08:21:29,765 * https://pypi.org/simple/funid/ 2023-03-23T08:21:29,765 * https://www.piwheels.org/simple/funid/ 2023-03-23T08:21:29,766 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-03-23T08:21:29,766 Getting page https://pypi.org/simple/funid/ 2023-03-23T08:21:29,768 Found index url https://pypi.org/simple 2023-03-23T08:21:29,817 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-03-23T08:21:29,821 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-03-23T08:21:29,821 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-03-23T08:21:29,822 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-03-23T08:21:29,822 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:29,823 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-03-23T08:21:29,823 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:29,824 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-03-23T08:21:29,824 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:29,825 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-03-23T08:21:29,825 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:29,826 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-03-23T08:21:29,826 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:29,827 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-03-23T08:21:29,827 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-03-23T08:21:29,827 Getting page https://www.piwheels.org/simple/funid/ 2023-03-23T08:21:29,828 Found index url https://www.piwheels.org/simple 2023-03-23T08:21:30,019 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-03-23T08:21:30,021 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:30,022 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:30,022 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:30,022 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-03-23T08:21:30,022 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-03-23T08:21:30,022 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-03-23T08:21:30,023 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-03-23T08:21:30,023 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-03-23T08:21:30,042 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-03-23T08:21:30,059 Collecting funid==0.3.5 2023-03-23T08:21:30,061 Created temporary directory: /tmp/pip-unpack-xqp6ff8b 2023-03-23T08:21:30,507 Downloading FunID-0.3.5.tar.gz (71.8 MB) 2023-03-23T08:22:06,683 Added funid==0.3.5 from https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-5etu5cz1' 2023-03-23T08:22:06,685 Running setup.py (path:/tmp/pip-wheel-8zmhtqz7/funid_a4a1dcc642804510a1b5d54e0f160029/setup.py) egg_info for package funid 2023-03-23T08:22:06,685 Created temporary directory: /tmp/pip-pip-egg-info-_1f6w5pg 2023-03-23T08:22:06,686 Preparing metadata (setup.py): started 2023-03-23T08:22:06,687 Running command python setup.py egg_info 2023-03-23T08:22:07,414 {'name': 'FunID', 'version': '0.3.5', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<=3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.7.1', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-03-23T08:22:07,415 running egg_info 2023-03-23T08:22:07,415 creating /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info 2023-03-23T08:22:07,449 writing /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/PKG-INFO 2023-03-23T08:22:07,452 writing dependency_links to /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/dependency_links.txt 2023-03-23T08:22:07,454 writing entry points to /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/entry_points.txt 2023-03-23T08:22:07,456 writing requirements to /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/requires.txt 2023-03-23T08:22:07,457 writing top-level names to /tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/top_level.txt 2023-03-23T08:22:07,459 writing manifest file '/tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/SOURCES.txt' 2023-03-23T08:22:07,577 reading manifest file '/tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/SOURCES.txt' 2023-03-23T08:22:07,579 adding license file 'LICENSE' 2023-03-23T08:22:07,582 writing manifest file '/tmp/pip-pip-egg-info-_1f6w5pg/FunID.egg-info/SOURCES.txt' 2023-03-23T08:22:07,642 Preparing metadata (setup.py): finished with status 'done' 2023-03-23T08:22:07,648 Source in /tmp/pip-wheel-8zmhtqz7/funid_a4a1dcc642804510a1b5d54e0f160029 has version 0.3.5, which satisfies requirement funid==0.3.5 from https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz 2023-03-23T08:22:07,649 Removed funid==0.3.5 from https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-5etu5cz1' 2023-03-23T08:22:07,656 Created temporary directory: /tmp/pip-unpack-rq0scgak 2023-03-23T08:22:07,657 Building wheels for collected packages: funid 2023-03-23T08:22:07,662 Created temporary directory: /tmp/pip-wheel-b2vjna0p 2023-03-23T08:22:07,662 Building wheel for funid (setup.py): started 2023-03-23T08:22:07,663 Destination directory: /tmp/pip-wheel-b2vjna0p 2023-03-23T08:22:07,663 Running command python setup.py bdist_wheel 2023-03-23T08:22:08,104 {'name': 'FunID', 'version': '0.3.5', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<=3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.7.1', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-03-23T08:22:08,380 running bdist_wheel 2023-03-23T08:22:08,703 running build 2023-03-23T08:22:08,704 running build_py 2023-03-23T08:22:08,740 creating build 2023-03-23T08:22:08,740 creating build/lib 2023-03-23T08:22:08,741 creating build/lib/funid 2023-03-23T08:22:08,742 copying funid/FunID_GUI.py -> build/lib/funid 2023-03-23T08:22:08,745 copying funid/main.py -> build/lib/funid 2023-03-23T08:22:08,747 copying funid/__init__.py -> build/lib/funid 2023-03-23T08:22:08,750 creating build/lib/funid/src 2023-03-23T08:22:08,751 copying funid/src/tree.py -> build/lib/funid/src 2023-03-23T08:22:08,754 copying funid/src/tool.py -> build/lib/funid/src 2023-03-23T08:22:08,756 copying funid/src/validate_option.py -> build/lib/funid/src 2023-03-23T08:22:08,759 copying funid/src/logger.py -> build/lib/funid/src 2023-03-23T08:22:08,761 copying funid/src/patch.py -> build/lib/funid/src 2023-03-23T08:22:08,764 copying funid/src/hasher.py -> build/lib/funid/src 2023-03-23T08:22:08,765 copying funid/src/reporter.py -> build/lib/funid/src 2023-03-23T08:22:08,769 copying funid/src/save.py -> build/lib/funid/src 2023-03-23T08:22:08,771 copying funid/src/search.py -> build/lib/funid/src 2023-03-23T08:22:08,773 copying funid/src/command.py -> build/lib/funid/src 2023-03-23T08:22:08,776 copying funid/src/initialize.py -> build/lib/funid/src 2023-03-23T08:22:08,779 copying funid/src/dataset.py -> build/lib/funid/src 2023-03-23T08:22:08,781 copying funid/src/manage_input.py -> build/lib/funid/src 2023-03-23T08:22:08,784 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-03-23T08:22:08,786 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-03-23T08:22:08,789 copying funid/src/cluster.py -> build/lib/funid/src 2023-03-23T08:22:08,792 copying funid/src/align.py -> build/lib/funid/src 2023-03-23T08:22:08,794 copying funid/src/concatenate.py -> build/lib/funid/src 2023-03-23T08:22:08,796 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-03-23T08:22:08,799 copying funid/src/trim.py -> build/lib/funid/src 2023-03-23T08:22:08,801 copying funid/src/ncbi.py -> build/lib/funid/src 2023-03-23T08:22:08,803 copying funid/src/modeltest.py -> build/lib/funid/src 2023-03-23T08:22:08,806 copying funid/src/ext.py -> build/lib/funid/src 2023-03-23T08:22:08,808 copying funid/src/validation.py -> build/lib/funid/src 2023-03-23T08:22:08,810 copying funid/src/__init__.py -> build/lib/funid/src 2023-03-23T08:22:08,812 copying funid/src/logics.py -> build/lib/funid/src 2023-03-23T08:22:08,814 creating build/lib/funid/data 2023-03-23T08:22:08,815 copying funid/data/__init__.py -> build/lib/funid/data 2023-03-23T08:22:08,818 running egg_info 2023-03-23T08:22:08,893 writing FunID.egg-info/PKG-INFO 2023-03-23T08:22:08,895 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-03-23T08:22:08,898 writing entry points to FunID.egg-info/entry_points.txt 2023-03-23T08:22:08,899 writing requirements to FunID.egg-info/requires.txt 2023-03-23T08:22:08,900 writing top-level names to FunID.egg-info/top_level.txt 2023-03-23T08:22:08,944 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-03-23T08:22:08,958 adding license file 'LICENSE' 2023-03-23T08:22:08,967 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-03-23T08:22:08,982 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,982 !! 2023-03-23T08:22:08,983 ############################ 2023-03-23T08:22:08,983 # Package would be ignored # 2023-03-23T08:22:08,983 ############################ 2023-03-23T08:22:08,983 Python recognizes 'funid.external' as an importable package, 2023-03-23T08:22:08,983 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,983 'funid.external' has been automatically added to the distribution only 2023-03-23T08:22:08,984 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,984 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,984 Please make sure that 'funid.external' is included as a package by using 2023-03-23T08:22:08,984 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:08,984 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:08,984 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:08,985 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:08,985 documentation page. 2023-03-23T08:22:08,985 !! 2023-03-23T08:22:08,985 check.warn(importable) 2023-03-23T08:22:08,985 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,986 !! 2023-03-23T08:22:08,986 ############################ 2023-03-23T08:22:08,986 # Package would be ignored # 2023-03-23T08:22:08,986 ############################ 2023-03-23T08:22:08,986 Python recognizes 'funid.external.BLAST_Windows' as an importable package, 2023-03-23T08:22:08,986 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,987 'funid.external.BLAST_Windows' has been automatically added to the distribution only 2023-03-23T08:22:08,987 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,987 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,987 Please make sure that 'funid.external.BLAST_Windows' is included as a package by using 2023-03-23T08:22:08,987 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:08,987 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:08,987 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:08,988 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:08,988 documentation page. 2023-03-23T08:22:08,988 !! 2023-03-23T08:22:08,988 check.warn(importable) 2023-03-23T08:22:08,989 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows.bin' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,989 !! 2023-03-23T08:22:08,989 ############################ 2023-03-23T08:22:08,989 # Package would be ignored # 2023-03-23T08:22:08,989 ############################ 2023-03-23T08:22:08,989 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package, 2023-03-23T08:22:08,990 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,990 'funid.external.BLAST_Windows.bin' has been automatically added to the distribution only 2023-03-23T08:22:08,990 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,990 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,990 Please make sure that 'funid.external.BLAST_Windows.bin' is included as a package by using 2023-03-23T08:22:08,990 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:08,990 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:08,991 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:08,991 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:08,991 documentation page. 2023-03-23T08:22:08,991 !! 2023-03-23T08:22:08,992 check.warn(importable) 2023-03-23T08:22:08,992 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows.doc' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,992 !! 2023-03-23T08:22:08,992 ############################ 2023-03-23T08:22:08,992 # Package would be ignored # 2023-03-23T08:22:08,992 ############################ 2023-03-23T08:22:08,993 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package, 2023-03-23T08:22:08,993 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,993 'funid.external.BLAST_Windows.doc' has been automatically added to the distribution only 2023-03-23T08:22:08,993 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,993 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,993 Please make sure that 'funid.external.BLAST_Windows.doc' is included as a package by using 2023-03-23T08:22:08,993 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:08,994 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:08,994 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:08,994 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:08,994 documentation page. 2023-03-23T08:22:08,994 !! 2023-03-23T08:22:08,995 check.warn(importable) 2023-03-23T08:22:08,995 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.FastTree_Windows' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,995 !! 2023-03-23T08:22:08,995 ############################ 2023-03-23T08:22:08,995 # Package would be ignored # 2023-03-23T08:22:08,995 ############################ 2023-03-23T08:22:08,996 Python recognizes 'funid.external.FastTree_Windows' as an importable package, 2023-03-23T08:22:08,996 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,996 'funid.external.FastTree_Windows' has been automatically added to the distribution only 2023-03-23T08:22:08,996 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,996 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,996 Please make sure that 'funid.external.FastTree_Windows' is included as a package by using 2023-03-23T08:22:08,996 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:08,997 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:08,997 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:08,997 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:08,997 documentation page. 2023-03-23T08:22:08,997 !! 2023-03-23T08:22:08,998 check.warn(importable) 2023-03-23T08:22:08,998 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.RAxML_Windows' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:08,998 !! 2023-03-23T08:22:08,998 ############################ 2023-03-23T08:22:08,998 # Package would be ignored # 2023-03-23T08:22:08,998 ############################ 2023-03-23T08:22:08,999 Python recognizes 'funid.external.RAxML_Windows' as an importable package, 2023-03-23T08:22:08,999 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:08,999 'funid.external.RAxML_Windows' has been automatically added to the distribution only 2023-03-23T08:22:08,999 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:08,999 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:08,999 Please make sure that 'funid.external.RAxML_Windows' is included as a package by using 2023-03-23T08:22:08,999 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,000 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,000 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,000 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,000 documentation page. 2023-03-23T08:22:09,000 !! 2023-03-23T08:22:09,001 check.warn(importable) 2023-03-23T08:22:09,001 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,001 !! 2023-03-23T08:22:09,001 ############################ 2023-03-23T08:22:09,001 # Package would be ignored # 2023-03-23T08:22:09,002 ############################ 2023-03-23T08:22:09,002 Python recognizes 'funid.external.mmseqs_Windows' as an importable package, 2023-03-23T08:22:09,002 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,002 'funid.external.mmseqs_Windows' has been automatically added to the distribution only 2023-03-23T08:22:09,002 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,002 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,002 Please make sure that 'funid.external.mmseqs_Windows' is included as a package by using 2023-03-23T08:22:09,003 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,003 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,003 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,003 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,003 documentation page. 2023-03-23T08:22:09,003 !! 2023-03-23T08:22:09,004 check.warn(importable) 2023-03-23T08:22:09,004 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.bin' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,004 !! 2023-03-23T08:22:09,004 ############################ 2023-03-23T08:22:09,004 # Package would be ignored # 2023-03-23T08:22:09,004 ############################ 2023-03-23T08:22:09,005 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package, 2023-03-23T08:22:09,005 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,005 'funid.external.mmseqs_Windows.bin' has been automatically added to the distribution only 2023-03-23T08:22:09,005 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,005 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,005 Please make sure that 'funid.external.mmseqs_Windows.bin' is included as a package by using 2023-03-23T08:22:09,005 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,006 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,006 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,006 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,006 documentation page. 2023-03-23T08:22:09,006 !! 2023-03-23T08:22:09,007 check.warn(importable) 2023-03-23T08:22:09,007 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.examples' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,007 !! 2023-03-23T08:22:09,007 ############################ 2023-03-23T08:22:09,007 # Package would be ignored # 2023-03-23T08:22:09,007 ############################ 2023-03-23T08:22:09,008 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package, 2023-03-23T08:22:09,008 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,008 'funid.external.mmseqs_Windows.examples' has been automatically added to the distribution only 2023-03-23T08:22:09,008 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,008 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,009 Please make sure that 'funid.external.mmseqs_Windows.examples' is included as a package by using 2023-03-23T08:22:09,009 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,009 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,009 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,009 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,009 documentation page. 2023-03-23T08:22:09,010 !! 2023-03-23T08:22:09,010 check.warn(importable) 2023-03-23T08:22:09,010 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.matrices' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,010 !! 2023-03-23T08:22:09,011 ############################ 2023-03-23T08:22:09,011 # Package would be ignored # 2023-03-23T08:22:09,011 ############################ 2023-03-23T08:22:09,011 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package, 2023-03-23T08:22:09,011 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,011 'funid.external.mmseqs_Windows.matrices' has been automatically added to the distribution only 2023-03-23T08:22:09,011 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,012 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,012 Please make sure that 'funid.external.mmseqs_Windows.matrices' is included as a package by using 2023-03-23T08:22:09,012 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,012 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,012 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,012 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,013 documentation page. 2023-03-23T08:22:09,013 !! 2023-03-23T08:22:09,013 check.warn(importable) 2023-03-23T08:22:09,013 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.util' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,013 !! 2023-03-23T08:22:09,014 ############################ 2023-03-23T08:22:09,014 # Package would be ignored # 2023-03-23T08:22:09,014 ############################ 2023-03-23T08:22:09,014 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package, 2023-03-23T08:22:09,014 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,015 'funid.external.mmseqs_Windows.util' has been automatically added to the distribution only 2023-03-23T08:22:09,015 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,016 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,016 Please make sure that 'funid.external.mmseqs_Windows.util' is included as a package by using 2023-03-23T08:22:09,016 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,016 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,017 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,017 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,017 documentation page. 2023-03-23T08:22:09,017 !! 2023-03-23T08:22:09,018 check.warn(importable) 2023-03-23T08:22:09,018 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,018 !! 2023-03-23T08:22:09,018 ############################ 2023-03-23T08:22:09,018 # Package would be ignored # 2023-03-23T08:22:09,019 ############################ 2023-03-23T08:22:09,019 Python recognizes 'funid.test_dataset.penicillium' as an importable package, 2023-03-23T08:22:09,019 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,019 'funid.test_dataset.penicillium' has been automatically added to the distribution only 2023-03-23T08:22:09,019 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,019 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,020 Please make sure that 'funid.test_dataset.penicillium' is included as a package by using 2023-03-23T08:22:09,020 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,020 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,020 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,020 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,020 documentation page. 2023-03-23T08:22:09,021 !! 2023-03-23T08:22:09,021 check.warn(importable) 2023-03-23T08:22:09,021 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium.DB' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,021 !! 2023-03-23T08:22:09,021 ############################ 2023-03-23T08:22:09,022 # Package would be ignored # 2023-03-23T08:22:09,022 ############################ 2023-03-23T08:22:09,022 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package, 2023-03-23T08:22:09,022 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,022 'funid.test_dataset.penicillium.DB' has been automatically added to the distribution only 2023-03-23T08:22:09,022 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,022 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,023 Please make sure that 'funid.test_dataset.penicillium.DB' is included as a package by using 2023-03-23T08:22:09,023 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,023 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,023 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,023 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,023 documentation page. 2023-03-23T08:22:09,024 !! 2023-03-23T08:22:09,024 check.warn(importable) 2023-03-23T08:22:09,024 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium.Query' as data is deprecated, please list it in `packages`. 2023-03-23T08:22:09,024 !! 2023-03-23T08:22:09,025 ############################ 2023-03-23T08:22:09,025 # Package would be ignored # 2023-03-23T08:22:09,025 ############################ 2023-03-23T08:22:09,025 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package, 2023-03-23T08:22:09,025 but it is not listed in the `packages` configuration of setuptools. 2023-03-23T08:22:09,025 'funid.test_dataset.penicillium.Query' has been automatically added to the distribution only 2023-03-23T08:22:09,025 because it may contain data files, but this behavior is likely to change 2023-03-23T08:22:09,025 in future versions of setuptools (and therefore is considered deprecated). 2023-03-23T08:22:09,026 Please make sure that 'funid.test_dataset.penicillium.Query' is included as a package by using 2023-03-23T08:22:09,026 the `packages` configuration field or the proper discovery methods 2023-03-23T08:22:09,026 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-03-23T08:22:09,026 instead of `find_packages(...)`/`find:`). 2023-03-23T08:22:09,026 You can read more about "package discovery" and "data files" on setuptools 2023-03-23T08:22:09,026 documentation page. 2023-03-23T08:22:09,027 !! 2023-03-23T08:22:09,027 check.warn(importable) 2023-03-23T08:22:09,027 creating build/lib/funid/external 2023-03-23T08:22:09,027 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-03-23T08:22:09,027 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-03-23T08:22:09,529 copying funid/external/__init__.py -> build/lib/funid/external 2023-03-23T08:22:09,530 creating build/lib/funid/external/BLAST_Windows 2023-03-23T08:22:09,531 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-03-23T08:22:09,535 creating build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:09,537 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:09,840 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:09,843 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:09,845 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:09,849 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:10,101 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:10,106 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-03-23T08:22:10,109 creating build/lib/funid/external/BLAST_Windows/doc 2023-03-23T08:22:10,110 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-03-23T08:22:10,113 creating build/lib/funid/external/FastTree_Windows 2023-03-23T08:22:10,114 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-03-23T08:22:10,128 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-03-23T08:22:10,129 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:10,130 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:10,143 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:10,146 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:10,148 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-03-23T08:22:10,149 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-03-23T08:22:10,154 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:10,155 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:10,157 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:10,160 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:10,163 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:10,166 creating build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,167 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,171 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,173 copying funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,210 copying funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,241 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,276 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,312 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,347 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,385 copying funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,420 copying funid/external/RAxML_Windows/raxmlHPC.exe -> build/lib/funid/external/RAxML_Windows 2023-03-23T08:22:10,453 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:10,454 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:10,507 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:10,509 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:10,513 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:10,519 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:10,519 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:10,731 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:10,913 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:10,940 creating build/lib/funid/external/mmseqs_Windows 2023-03-23T08:22:10,941 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-03-23T08:22:10,945 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-03-23T08:22:10,949 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-03-23T08:22:10,951 copying funid/external/mmseqs_Windows/userguide.pdf -> build/lib/funid/external/mmseqs_Windows 2023-03-23T08:22:11,036 creating build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,037 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,052 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,056 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,061 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,068 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,111 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,181 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,186 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:11,446 creating build/lib/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:11,447 copying funid/external/mmseqs_Windows/examples/DB.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:11,691 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:11,700 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,701 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,704 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,706 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,709 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,711 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,713 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,716 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,718 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,721 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,723 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,725 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,727 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,730 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,733 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,735 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,737 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,740 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,742 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,744 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,747 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,749 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,751 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,754 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,756 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,759 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,761 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,764 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,766 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,769 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,771 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,774 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,776 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,779 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,781 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,784 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,786 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,788 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,791 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,793 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,796 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,799 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,801 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:11,804 creating build/lib/funid/external/mmseqs_Windows/util 2023-03-23T08:22:11,805 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-03-23T08:22:11,807 creating build/lib/funid/external/trimal.v1.2rev59 2023-03-23T08:22:11,808 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:11,809 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:11,812 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:11,814 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:11,818 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:11,820 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:11,821 copying funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:11,840 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:11,857 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,858 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,862 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,866 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,870 copying funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,873 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,875 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,878 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,880 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,883 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,886 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,888 copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:11,938 copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:12,002 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,003 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,008 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,012 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,015 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,019 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,022 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,026 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,029 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,032 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,037 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,040 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,043 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,046 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,049 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,052 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,055 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,058 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,061 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,113 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,119 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,121 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,125 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:12,127 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-03-23T08:22:12,130 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-03-23T08:22:12,134 creating build/lib/funid/test_dataset 2023-03-23T08:22:12,135 creating build/lib/funid/test_dataset/penicillium 2023-03-23T08:22:12,136 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-03-23T08:22:12,139 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-03-23T08:22:12,142 creating build/lib/funid/test_dataset/penicillium/DB 2023-03-23T08:22:12,143 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-03-23T08:22:12,354 creating build/lib/funid/test_dataset/penicillium/Query 2023-03-23T08:22:12,355 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-03-23T08:22:12,361 creating build/lib/funid/preset 2023-03-23T08:22:12,363 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-03-23T08:22:12,366 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-03-23T08:22:12,433 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-03-23T08:22:12,433 warnings.warn( 2023-03-23T08:22:12,467 installing to build/bdist.linux-armv7l/wheel 2023-03-23T08:22:12,468 running install 2023-03-23T08:22:12,494 running install_lib 2023-03-23T08:22:12,529 creating build/bdist.linux-armv7l 2023-03-23T08:22:12,530 creating build/bdist.linux-armv7l/wheel 2023-03-23T08:22:12,532 creating build/bdist.linux-armv7l/wheel/funid 2023-03-23T08:22:12,534 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-03-23T08:22:12,535 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-03-23T08:22:12,537 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-03-23T08:22:12,540 creating build/bdist.linux-armv7l/wheel/funid/external 2023-03-23T08:22:12,541 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-03-23T08:22:13,097 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-03-23T08:22:13,099 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:13,101 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,103 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,105 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,108 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,111 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,113 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,115 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,117 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,120 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,122 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,125 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,128 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,130 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,132 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,135 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,137 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,139 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,143 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,145 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,148 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,150 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,152 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,154 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-03-23T08:22:13,159 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,160 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,163 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,165 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,167 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,169 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,172 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,174 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,177 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,205 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,255 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,257 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,259 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-03-23T08:22:13,260 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:13,262 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:13,265 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:13,268 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:13,269 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:13,283 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-03-23T08:22:13,298 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-03-23T08:22:13,301 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-03-23T08:22:13,303 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-03-23T08:22:13,304 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-03-23T08:22:13,306 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,307 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,553 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,556 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,872 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,878 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,881 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,885 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-03-23T08:22:13,887 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-03-23T08:22:13,891 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:13,892 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:13,927 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:13,957 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:13,991 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:13,992 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,023 copying build/lib/funid/external/RAxML_Windows/raxmlHPC.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,054 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,099 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,102 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,133 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-03-23T08:22:14,164 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-03-23T08:22:14,168 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-03-23T08:22:14,170 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:14,171 copying build/lib/funid/external/mmseqs_Windows/examples/DB.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:14,390 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-03-23T08:22:14,400 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-03-23T08:22:14,404 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-03-23T08:22:14,407 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-03-23T08:22:14,410 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,411 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,415 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,429 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,433 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,437 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,477 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,562 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,823 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-03-23T08:22:14,831 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,833 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,835 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,837 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,839 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,841 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,843 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,845 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,847 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,849 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,851 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,853 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,855 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,857 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,860 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,862 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,864 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,866 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,868 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,870 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,872 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,874 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,876 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,878 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,880 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,882 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,884 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,886 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,889 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,891 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,893 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,895 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,897 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,899 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,901 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,903 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,905 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,907 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,910 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,912 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,914 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,916 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,918 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-03-23T08:22:14,920 copying build/lib/funid/external/mmseqs_Windows/userguide.pdf -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-03-23T08:22:15,019 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-03-23T08:22:15,020 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-03-23T08:22:15,023 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-03-23T08:22:15,024 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:15,026 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:15,027 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:15,030 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:15,033 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:15,035 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-03-23T08:22:15,038 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:15,040 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:15,042 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-03-23T08:22:15,055 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-03-23T08:22:15,056 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-03-23T08:22:15,061 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-03-23T08:22:15,063 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-03-23T08:22:15,064 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-03-23T08:22:15,081 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:15,082 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:15,131 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:15,134 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:15,134 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:15,417 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:15,521 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-03-23T08:22:16,326 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:16,332 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-03-23T08:22:16,342 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-03-23T08:22:16,346 creating build/bdist.linux-armv7l/wheel/funid/data 2023-03-23T08:22:16,348 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-03-23T08:22:16,354 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-03-23T08:22:16,357 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-03-23T08:22:16,360 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-03-23T08:22:16,362 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-03-23T08:22:16,364 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-03-23T08:22:16,365 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-03-23T08:22:16,379 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-03-23T08:22:16,382 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-03-23T08:22:16,383 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-03-23T08:22:16,391 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-03-23T08:22:16,395 creating build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,396 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,400 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,403 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,408 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,411 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,414 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,416 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,420 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,423 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,426 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,428 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,432 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,435 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,438 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,441 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,446 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,449 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,451 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,454 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,457 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,459 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,462 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,465 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,468 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,471 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,474 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-03-23T08:22:16,477 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-03-23T08:22:16,480 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-03-23T08:22:16,481 running install_egg_info 2023-03-23T08:22:16,524 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.5-py3.9.egg-info 2023-03-23T08:22:16,545 running install_scripts 2023-03-23T08:22:16,574 creating build/bdist.linux-armv7l/wheel/FunID-0.3.5.dist-info/WHEEL 2023-03-23T08:22:16,578 creating '/tmp/pip-wheel-b2vjna0p/FunID-0.3.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-23T08:22:16,583 adding 'funid/FunID_GUI.py' 2023-03-23T08:22:16,585 adding 'funid/__init__.py' 2023-03-23T08:22:16,587 adding 'funid/main.py' 2023-03-23T08:22:16,591 adding 'funid/data/Option_manager.xlsx' 2023-03-23T08:22:16,592 adding 'funid/data/__init__.py' 2023-03-23T08:22:16,600 adding 'funid/data/genus_line.txt' 2023-03-23T08:22:16,608 adding 'funid/external/MAFFT_LICENSE' 2023-03-23T08:22:19,735 adding 'funid/external/MAFFT_Windows.zip' 2023-03-23T08:22:19,904 adding 'funid/external/__init__.py' 2023-03-23T08:22:19,913 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-03-23T08:22:22,915 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-03-23T08:22:23,305 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-03-23T08:22:23,307 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-03-23T08:22:23,311 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-03-23T08:22:25,396 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-03-23T08:22:25,552 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-03-23T08:22:25,557 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-03-23T08:22:25,559 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-03-23T08:22:25,616 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-03-23T08:22:25,658 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-03-23T08:22:25,661 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-03-23T08:22:25,662 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-03-23T08:22:25,667 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-03-23T08:22:25,670 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-03-23T08:22:25,672 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-03-23T08:22:25,674 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-03-23T08:22:25,676 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-03-23T08:22:25,683 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-03-23T08:22:25,685 adding 'funid/external/RAxML_Windows/README' 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