2023-03-24T06:09:20,143 Created temporary directory: /tmp/pip-ephem-wheel-cache-ha908pvp 2023-03-24T06:09:20,149 Created temporary directory: /tmp/pip-build-tracker-xnmq1xhk 2023-03-24T06:09:20,150 Initialized build tracking at /tmp/pip-build-tracker-xnmq1xhk 2023-03-24T06:09:20,150 Created build tracker: /tmp/pip-build-tracker-xnmq1xhk 2023-03-24T06:09:20,150 Entered build tracker: /tmp/pip-build-tracker-xnmq1xhk 2023-03-24T06:09:20,152 Created temporary directory: /tmp/pip-wheel-kfnr5iik 2023-03-24T06:09:20,167 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-24T06:09:20,172 Created temporary directory: /tmp/pip-ephem-wheel-cache-o01q50sc 2023-03-24T06:09:20,226 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-24T06:09:20,232 2 location(s) to search for versions of singlecellexperiment: 2023-03-24T06:09:20,232 * https://pypi.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,232 * https://www.piwheels.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,234 Fetching project page and analyzing links: https://pypi.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,235 Getting page https://pypi.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,239 Found index url https://pypi.org/simple 2023-03-24T06:09:20,427 Fetched page https://pypi.org/simple/singlecellexperiment/ as application/vnd.pypi.simple.v1+json 2023-03-24T06:09:20,435 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/06/22/dc7ff7a9cbb849320db55483824aa238639983004a3384e3cbb56fe1b55c/SingleCellExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,436 Found link https://files.pythonhosted.org/packages/4f/c7/2f87f03dc0a39652929e596b999610770d5a2ad3c98c9d4eda99ac6ad1fc/SingleCellExperiment-0.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.1 2023-03-24T06:09:20,437 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/12/17/fdf09ec58f3668dedd84dd72d7f33e9a39b92641c71419a31ba4b11fd93f/SingleCellExperiment-0.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,437 Found link https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2 2023-03-24T06:09:20,438 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/39/57/e51f288c79b8ceab3e3256bf280bea555114a5f69043fcd3079c61bc0c3a/SingleCellExperiment-0.2.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,438 Found link https://files.pythonhosted.org/packages/e6/16/21b02cd4340a21322d8f0393955aa35b917e5a3771293b7754897e44d7dd/SingleCellExperiment-0.2.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.1 2023-03-24T06:09:20,439 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/db/ba/9e1dc2767aa10eb42ccfd538a2f3f5a4e6fa6e50abda9df14e142606c1ce/SingleCellExperiment-0.2.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,440 Found link https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.2 2023-03-24T06:09:20,440 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/c7/95/91f1348839c55d478f9bd55165dbe3a80b33542a66a6c2d060bf30dd39b8/SingleCellExperiment-0.2.3-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,441 Found link https://files.pythonhosted.org/packages/9e/5d/e7e5d26eda5b1c4980132bc0750c92058994843f1dc478f9cdeb9a46f49b/SingleCellExperiment-0.2.3.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.3 2023-03-24T06:09:20,442 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/26/3f/a5b3987566df7f1f7d2813a867e61905c0de12927283eed6b9dea80453af/SingleCellExperiment-0.2.4-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,442 Found link https://files.pythonhosted.org/packages/86/3c/225b1d20037de71ffb5e7da70c4054c920653f9d0d5b9356a909c0c54a01/SingleCellExperiment-0.2.4.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.4 2023-03-24T06:09:20,443 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/ab/eb/0cece8ff3bbe0c637e5312dfdb8670f11c6188c5c6baea0b8912f984cdb6/SingleCellExperiment-0.2.5-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,443 Found link https://files.pythonhosted.org/packages/49/a6/2d242dfed7bfff76de83c02c20b6d73ff7a4621ae33458c0b0e35f98e2e5/SingleCellExperiment-0.2.5.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.5 2023-03-24T06:09:20,444 Fetching project page and analyzing links: https://www.piwheels.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,445 Getting page https://www.piwheels.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,447 Found index url https://www.piwheels.org/simple 2023-03-24T06:09:20,708 Fetched page https://www.piwheels.org/simple/singlecellexperiment/ as text/html 2023-03-24T06:09:20,715 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.4-py3-none-any.whl#sha256=47efbd0ede1392ee8f9c4777c21a6002f50c186bbb9f10e26d8de43e03165906 (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,715 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.3-py3-none-any.whl#sha256=2e07a3126c601d37f155a55c3a06f37e8a02682d018134f280b6967a1a52c6bc (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,716 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.2-py3-none-any.whl#sha256=bebfd5697c376b98a2cd4ccf7a10b257390d8711dd7b46cde48f2550545bf09e (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,716 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.1-py3-none-any.whl#sha256=79346b13d2b934a5e3ea35c048ac23d7cf2655855f8b490272d0861daf232df9 (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,717 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2-py3-none-any.whl#sha256=a65a3769c1131ce8b3960c77dfebb0d0a4684a3c6e27ee1b7f5b3a6412615ffb (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,717 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.1-py3-none-any.whl#sha256=3f769bcfff226d0998e8ad6fb4dff2e44710993eb3067a315d50b3031efb1e4f (from https://www.piwheels.org/simple/singlecellexperiment/) 2023-03-24T06:09:20,718 Skipping link: not a file: https://www.piwheels.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,718 Skipping link: not a file: https://pypi.org/simple/singlecellexperiment/ 2023-03-24T06:09:20,753 Given no hashes to check 1 links for project 'singlecellexperiment': discarding no candidates 2023-03-24T06:09:20,783 Collecting singlecellexperiment==0.2.5 2023-03-24T06:09:20,788 Created temporary directory: /tmp/pip-unpack-vdz0ztri 2023-03-24T06:09:21,089 Downloading SingleCellExperiment-0.2.5.tar.gz (1.1 MB) 2023-03-24T06:09:21,670 Added singlecellexperiment==0.2.5 from https://files.pythonhosted.org/packages/49/a6/2d242dfed7bfff76de83c02c20b6d73ff7a4621ae33458c0b0e35f98e2e5/SingleCellExperiment-0.2.5.tar.gz to build tracker '/tmp/pip-build-tracker-xnmq1xhk' 2023-03-24T06:09:21,683 Created temporary directory: /tmp/pip-build-env-238xhod5 2023-03-24T06:09:21,703 Installing build dependencies: started 2023-03-24T06:09:21,706 Running command pip subprocess to install build dependencies 2023-03-24T06:09:24,547 Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-03-24T06:09:25,770 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-24T06:09:25,827 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-24T06:09:29,764 Collecting setuptools>=46.1.0 2023-03-24T06:09:29,989 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.0-py3-none-any.whl (1.1 MB) 2023-03-24T06:09:30,913 Collecting setuptools_scm[toml]>=5 2023-03-24T06:09:30,979 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-03-24T06:09:31,511 Collecting wheel 2023-03-24T06:09:31,546 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-03-24T06:09:31,908 Collecting typing-extensions 2023-03-24T06:09:31,944 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.5.0-py3-none-any.whl (27 kB) 2023-03-24T06:09:32,219 Collecting tomli>=1.0.0 2023-03-24T06:09:32,252 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-03-24T06:09:32,674 Collecting packaging>=20.0 2023-03-24T06:09:32,733 Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB) 2023-03-24T06:09:33,693 Collecting importlib-metadata 2023-03-24T06:09:33,752 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.1.0-py3-none-any.whl (21 kB) 2023-03-24T06:09:35,413 Collecting zipp>=0.5 2023-03-24T06:09:35,475 Using cached https://www.piwheels.org/simple/zipp/zipp-3.15.0-py3-none-any.whl (6.8 kB) 2023-03-24T06:09:41,157 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2023-03-24T06:09:41,666 Creating /tmp/pip-build-env-238xhod5/overlay/bin 2023-03-24T06:09:41,671 changing mode of /tmp/pip-build-env-238xhod5/overlay/bin/wheel to 755 2023-03-24T06:09:46,903 Successfully installed importlib-metadata-6.1.0 packaging-23.0 setuptools-67.6.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.5.0 wheel-0.40.0 zipp-3.15.0 2023-03-24T06:09:47,926 Installing build dependencies: finished with status 'done' 2023-03-24T06:09:47,939 Getting requirements to build wheel: started 2023-03-24T06:09:47,941 Running command Getting requirements to build wheel 2023-03-24T06:09:49,777 running egg_info 2023-03-24T06:09:49,792 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-03-24T06:09:49,796 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-03-24T06:09:49,801 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-03-24T06:09:49,804 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-03-24T06:09:49,926 listing git files failed - pretending there aren't any 2023-03-24T06:09:49,946 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:49,956 adding license file 'LICENSE.txt' 2023-03-24T06:09:49,966 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:50,103 Getting requirements to build wheel: finished with status 'done' 2023-03-24T06:09:50,131 Created temporary directory: /tmp/pip-modern-metadata-t7cpj2w7 2023-03-24T06:09:50,137 Preparing metadata (pyproject.toml): started 2023-03-24T06:09:50,140 Running command Preparing metadata (pyproject.toml) 2023-03-24T06:09:51,686 running dist_info 2023-03-24T06:09:51,730 creating /tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info 2023-03-24T06:09:51,745 writing /tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/PKG-INFO 2023-03-24T06:09:51,751 writing dependency_links to /tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/dependency_links.txt 2023-03-24T06:09:51,756 writing requirements to /tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/requires.txt 2023-03-24T06:09:51,759 writing top-level names to /tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/top_level.txt 2023-03-24T06:09:51,762 writing manifest file '/tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:51,880 listing git files failed - pretending there aren't any 2023-03-24T06:09:51,898 reading manifest file '/tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:51,910 adding license file 'LICENSE.txt' 2023-03-24T06:09:51,917 writing manifest file '/tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:51,919 creating '/tmp/pip-modern-metadata-t7cpj2w7/SingleCellExperiment-0.2.5.dist-info' 2023-03-24T06:09:52,271 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-24T06:09:52,285 Source in /tmp/pip-wheel-kfnr5iik/singlecellexperiment_9758ffa4c7d4420f92cf8fc461bb3211 has version 0.2.5, which satisfies requirement singlecellexperiment==0.2.5 from https://files.pythonhosted.org/packages/49/a6/2d242dfed7bfff76de83c02c20b6d73ff7a4621ae33458c0b0e35f98e2e5/SingleCellExperiment-0.2.5.tar.gz 2023-03-24T06:09:52,287 Removed singlecellexperiment==0.2.5 from https://files.pythonhosted.org/packages/49/a6/2d242dfed7bfff76de83c02c20b6d73ff7a4621ae33458c0b0e35f98e2e5/SingleCellExperiment-0.2.5.tar.gz from build tracker '/tmp/pip-build-tracker-xnmq1xhk' 2023-03-24T06:09:52,296 Created temporary directory: /tmp/pip-unpack-6fxx1tnd 2023-03-24T06:09:52,297 Building wheels for collected packages: singlecellexperiment 2023-03-24T06:09:52,306 Created temporary directory: /tmp/pip-wheel-hg13tzqe 2023-03-24T06:09:52,307 Destination directory: /tmp/pip-wheel-hg13tzqe 2023-03-24T06:09:52,312 Building wheel for singlecellexperiment (pyproject.toml): started 2023-03-24T06:09:52,314 Running command Building wheel for singlecellexperiment (pyproject.toml) 2023-03-24T06:09:53,929 running bdist_wheel 2023-03-24T06:09:54,022 running build 2023-03-24T06:09:54,023 running build_py 2023-03-24T06:09:54,045 creating build 2023-03-24T06:09:54,045 creating build/lib 2023-03-24T06:09:54,047 creating build/lib/singlecellexperiment 2023-03-24T06:09:54,049 copying src/singlecellexperiment/SingleCellExperiment.py -> build/lib/singlecellexperiment 2023-03-24T06:09:54,054 copying src/singlecellexperiment/__init__.py -> build/lib/singlecellexperiment 2023-03-24T06:09:54,059 creating build/lib/singlecellexperiment/io 2023-03-24T06:09:54,060 copying src/singlecellexperiment/io/anndata.py -> build/lib/singlecellexperiment/io 2023-03-24T06:09:54,064 copying src/singlecellexperiment/io/tenx.py -> build/lib/singlecellexperiment/io 2023-03-24T06:09:54,067 copying src/singlecellexperiment/io/__init__.py -> build/lib/singlecellexperiment/io 2023-03-24T06:09:54,070 running egg_info 2023-03-24T06:09:54,118 writing src/SingleCellExperiment.egg-info/PKG-INFO 2023-03-24T06:09:54,121 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2023-03-24T06:09:54,125 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2023-03-24T06:09:54,127 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2023-03-24T06:09:54,214 listing git files failed - pretending there aren't any 2023-03-24T06:09:54,233 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:54,240 adding license file 'LICENSE.txt' 2023-03-24T06:09:54,250 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2023-03-24T06:09:54,304 installing to build/bdist.linux-armv7l/wheel 2023-03-24T06:09:54,304 running install 2023-03-24T06:09:54,363 running install_lib 2023-03-24T06:09:54,383 creating build/bdist.linux-armv7l 2023-03-24T06:09:54,384 creating build/bdist.linux-armv7l/wheel 2023-03-24T06:09:54,388 creating build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-03-24T06:09:54,390 copying build/lib/singlecellexperiment/SingleCellExperiment.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-03-24T06:09:54,396 creating build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-03-24T06:09:54,398 copying build/lib/singlecellexperiment/io/anndata.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-03-24T06:09:54,402 copying build/lib/singlecellexperiment/io/tenx.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-03-24T06:09:54,405 copying build/lib/singlecellexperiment/io/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2023-03-24T06:09:54,409 copying build/lib/singlecellexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2023-03-24T06:09:54,412 running install_egg_info 2023-03-24T06:09:54,434 Copying src/SingleCellExperiment.egg-info to build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.5-py3.7.egg-info 2023-03-24T06:09:54,458 running install_scripts 2023-03-24T06:09:54,492 creating build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.5.dist-info/WHEEL 2023-03-24T06:09:54,498 creating '/tmp/pip-wheel-hg13tzqe/.tmp-nxx17t6d/SingleCellExperiment-0.2.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-24T06:09:54,509 adding 'singlecellexperiment/SingleCellExperiment.py' 2023-03-24T06:09:54,512 adding 'singlecellexperiment/__init__.py' 2023-03-24T06:09:54,515 adding 'singlecellexperiment/io/__init__.py' 2023-03-24T06:09:54,517 adding 'singlecellexperiment/io/anndata.py' 2023-03-24T06:09:54,520 adding 'singlecellexperiment/io/tenx.py' 2023-03-24T06:09:54,522 adding 'SingleCellExperiment-0.2.5.dist-info/LICENSE.txt' 2023-03-24T06:09:54,525 adding 'SingleCellExperiment-0.2.5.dist-info/METADATA' 2023-03-24T06:09:54,527 adding 'SingleCellExperiment-0.2.5.dist-info/WHEEL' 2023-03-24T06:09:54,529 adding 'SingleCellExperiment-0.2.5.dist-info/top_level.txt' 2023-03-24T06:09:54,531 adding 'SingleCellExperiment-0.2.5.dist-info/RECORD' 2023-03-24T06:09:54,534 removing build/bdist.linux-armv7l/wheel 2023-03-24T06:09:54,695 Building wheel for singlecellexperiment (pyproject.toml): finished with status 'done' 2023-03-24T06:09:54,708 Created wheel for singlecellexperiment: filename=SingleCellExperiment-0.2.5-py3-none-any.whl size=9523 sha256=801dc260f35802873fabf8027063c80b52d61492885d6b33976e69369a3d04af 2023-03-24T06:09:54,710 Stored in directory: /tmp/pip-ephem-wheel-cache-o01q50sc/wheels/43/f1/23/7136fcf7fc082a95abe7cd9a453253f5dff80826bac0f250db 2023-03-24T06:09:54,735 Successfully built singlecellexperiment 2023-03-24T06:09:54,744 Removed build tracker: '/tmp/pip-build-tracker-xnmq1xhk'