2023-03-25T00:48:19,199 Created temporary directory: /tmp/pip-ephem-wheel-cache-tet_12py 2023-03-25T00:48:19,202 Created temporary directory: /tmp/pip-build-tracker-y0_tse7z 2023-03-25T00:48:19,202 Initialized build tracking at /tmp/pip-build-tracker-y0_tse7z 2023-03-25T00:48:19,203 Created build tracker: /tmp/pip-build-tracker-y0_tse7z 2023-03-25T00:48:19,203 Entered build tracker: /tmp/pip-build-tracker-y0_tse7z 2023-03-25T00:48:19,203 Created temporary directory: /tmp/pip-wheel-w1ls712m 2023-03-25T00:48:19,208 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. 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https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,329 Found link https://files.pythonhosted.org/packages/3d/c6/c039d2c2749bf2f45a0e15c5c7446c84077210527270a35612d20c86c063/biolink-model-3.1.1.tar.gz (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7), version: 3.1.1 2023-03-25T00:48:19,329 Skipping link: No binaries permitted for biolink-model: https://files.pythonhosted.org/packages/bf/4c/96cdc2767dbbe7880c2bcad50acab54d9672e1d9a05f9ca81fe7d76fcae8/biolink_model-3.1.1-py3-none-any.whl (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,330 Found link https://files.pythonhosted.org/packages/8b/40/a29611c683ac0baa63ca5b0b799df6479f3e437689d7882542bbc05e374a/biolink-model-3.1.2.tar.gz (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7), version: 3.1.2 2023-03-25T00:48:19,330 Skipping link: No binaries permitted for biolink-model: https://files.pythonhosted.org/packages/ad/7d/a1f20dc6487a3b7cf62c750d031c80b23de26d28a3dcd502e6bc5a8bd435/biolink_model-3.1.2-py3-none-any.whl (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,331 Found link https://files.pythonhosted.org/packages/ce/3d/154aaa163a5ece0a13f1148433b3f0e63028719f4a25f8d9773103f36f73/biolink-model-3.2.0.tar.gz (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7), version: 3.2.0 2023-03-25T00:48:19,331 Skipping link: No binaries permitted for biolink-model: https://files.pythonhosted.org/packages/4a/9d/6f0db7b65ee3ad0cb2924790b1e13ef313ddb711dfc6b5682718d1a9b888/biolink_model-3.2.0-py3-none-any.whl (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,331 Found link https://files.pythonhosted.org/packages/11/ef/1c19df436401799d574cfd02b4b97f07d3ee9f4163ccb25df760e1435620/biolink-model-3.2.1.tar.gz (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7), version: 3.2.1 2023-03-25T00:48:19,332 Skipping link: No binaries permitted for biolink-model: https://files.pythonhosted.org/packages/e7/f0/b35d3d303790037d9492c0bc66c962929f22d4418c131e8d26ea55ea2ddf/biolink_model-3.2.1-py3-none-any.whl (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,332 Found link https://files.pythonhosted.org/packages/f6/53/b2ca8b2e0edce4f04f785b866f8a61a5666ab235a1107549275ad8658e70/biolink-model-3.2.2.tar.gz (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7), version: 3.2.2 2023-03-25T00:48:19,333 Skipping link: No binaries permitted for biolink-model: https://files.pythonhosted.org/packages/f7/36/c83c4bde7fbd22fc16c1ceb51789d20c8469c9a43577b01d70ce96996bad/biolink_model-3.2.2-py3-none-any.whl (from https://pypi.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,333 Fetching project page and analyzing links: https://www.piwheels.org/simple/biolink-model/ 2023-03-25T00:48:19,333 Getting page https://www.piwheels.org/simple/biolink-model/ 2023-03-25T00:48:19,334 Found index url https://www.piwheels.org/simple 2023-03-25T00:48:19,490 Fetched page https://www.piwheels.org/simple/biolink-model/ as text/html 2023-03-25T00:48:19,493 Skipping link: No binaries permitted for biolink-model: https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.5-py3-none-any.whl#sha256=d4fb26095d715bd9abea9e36b3a3c14299c2de72b3c2333e8dc4b91248af2fb7 (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,493 Skipping link: No binaries permitted for biolink-model: https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.4-py3-none-any.whl#sha256=903f752ed3430dbab76022e2c69176550e267eb9c55ac4cb39b98d9b270609d0 (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,493 Skipping link: No binaries permitted for biolink-model: https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.3-py3-none-any.whl#sha256=882f1d08c2a5605c40c0ae3368dcc1acbf5349c9f9aff243c999f6fa575a1e52 (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,493 Skipping link: No binaries permitted for biolink-model: https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.2-py3-none-any.whl#sha256=460f615978ea5b78c1736ba23bc4c05f92a8125034eed571f83a57f1fc06f8fd (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-03-25T00:48:19,493 Skipping link: not a file: https://www.piwheels.org/simple/biolink-model/ 2023-03-25T00:48:19,494 Skipping link: not a file: https://pypi.org/simple/biolink-model/ 2023-03-25T00:48:19,516 Given no hashes to check 1 links for project 'biolink-model': discarding no candidates 2023-03-25T00:48:19,533 Collecting biolink-model==3.2.2 2023-03-25T00:48:19,535 Created temporary directory: /tmp/pip-unpack-trv_ibz4 2023-03-25T00:48:19,578 Downloading biolink-model-3.2.2.tar.gz (113 kB) 2023-03-25T00:48:19,707 Added biolink-model==3.2.2 from https://files.pythonhosted.org/packages/f6/53/b2ca8b2e0edce4f04f785b866f8a61a5666ab235a1107549275ad8658e70/biolink-model-3.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-y0_tse7z' 2023-03-25T00:48:19,714 Created temporary directory: /tmp/pip-build-env-l1xjrvoy 2023-03-25T00:48:19,729 Installing build dependencies: started 2023-03-25T00:48:19,730 Running command pip subprocess to install build dependencies 2023-03-25T00:48:20,990 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-03-25T00:48:21,621 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-25T00:48:21,648 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-25T00:48:22,077 Collecting poetry-core>=1.0.0 2023-03-25T00:48:22,167 Using cached https://www.piwheels.org/simple/poetry-core/poetry_core-1.5.2-py3-none-any.whl (465 kB) 2023-03-25T00:48:22,377 Collecting poetry-dynamic-versioning 2023-03-25T00:48:22,396 Using cached https://www.piwheels.org/simple/poetry-dynamic-versioning/poetry_dynamic_versioning-0.21.4-py3-none-any.whl (14 kB) 2023-03-25T00:48:22,656 Collecting tomlkit>=0.4 2023-03-25T00:48:22,685 Using cached https://www.piwheels.org/simple/tomlkit/tomlkit-0.11.6-py3-none-any.whl (35 kB) 2023-03-25T00:48:22,862 Collecting jinja2<4,>=2.11.1 2023-03-25T00:48:22,884 Using cached https://www.piwheels.org/simple/jinja2/Jinja2-3.1.2-py3-none-any.whl (133 kB) 2023-03-25T00:48:23,107 Collecting dunamai<2.0.0,>=1.16.0 2023-03-25T00:48:23,124 Using cached https://www.piwheels.org/simple/dunamai/dunamai-1.16.0-py3-none-any.whl (23 kB) 2023-03-25T00:48:23,307 Collecting packaging>=20.9 2023-03-25T00:48:23,328 Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB) 2023-03-25T00:48:23,763 Collecting MarkupSafe>=2.0 2023-03-25T00:48:23,780 Using cached https://www.piwheels.org/simple/markupsafe/MarkupSafe-2.1.2-cp39-cp39-linux_armv7l.whl (23 kB) 2023-03-25T00:48:25,708 Installing collected packages: tomlkit, poetry-core, packaging, MarkupSafe, jinja2, dunamai, poetry-dynamic-versioning 2023-03-25T00:48:28,343 Creating /tmp/pip-build-env-l1xjrvoy/overlay/bin 2023-03-25T00:48:28,345 changing mode of /tmp/pip-build-env-l1xjrvoy/overlay/bin/dunamai to 755 2023-03-25T00:48:28,403 changing mode of /tmp/pip-build-env-l1xjrvoy/overlay/bin/poetry-dynamic-versioning to 755 2023-03-25T00:48:28,425 Successfully installed MarkupSafe-2.1.2 dunamai-1.16.0 jinja2-3.1.2 packaging-23.0 poetry-core-1.5.2 poetry-dynamic-versioning-0.21.4 tomlkit-0.11.6 2023-03-25T00:48:28,940 Installing build dependencies: finished with status 'done' 2023-03-25T00:48:28,945 Getting requirements to build wheel: started 2023-03-25T00:48:28,946 Running command Getting requirements to build wheel 2023-03-25T00:48:29,366 Getting requirements to build wheel: finished with status 'done' 2023-03-25T00:48:29,372 Created temporary directory: /tmp/pip-modern-metadata-lkyvn_6q 2023-03-25T00:48:29,375 Preparing metadata (pyproject.toml): started 2023-03-25T00:48:29,376 Running command Preparing metadata (pyproject.toml) 2023-03-25T00:48:30,470 Traceback (most recent call last): 2023-03-25T00:48:30,471 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-03-25T00:48:30,471 main() 2023-03-25T00:48:30,471 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-03-25T00:48:30,472 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-03-25T00:48:30,472 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 149, in prepare_metadata_for_build_wheel 2023-03-25T00:48:30,472 return hook(metadata_directory, config_settings) 2023-03-25T00:48:30,472 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/poetry/core/masonry/api.py", line 40, in prepare_metadata_for_build_wheel 2023-03-25T00:48:30,473 poetry = Factory().create_poetry(Path(".").resolve(), with_groups=False) 2023-03-25T00:48:30,473 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/poetry_dynamic_versioning/patch.py", line 22, in alt_poetry_create 2023-03-25T00:48:30,473 name = _get_and_apply_version( 2023-03-25T00:48:30,473 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/poetry_dynamic_versioning/__init__.py", line 341, in _get_and_apply_version 2023-03-25T00:48:30,474 version = _get_version(config) 2023-03-25T00:48:30,474 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/poetry_dynamic_versioning/__init__.py", line 197, in _get_version 2023-03-25T00:48:30,474 version = Version.from_vcs( 2023-03-25T00:48:30,474 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/dunamai/__init__.py", line 1751, in from_vcs 2023-03-25T00:48:30,476 return cls._do_vcs_callback( 2023-03-25T00:48:30,476 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/dunamai/__init__.py", line 1785, in _do_vcs_callback 2023-03-25T00:48:30,477 return callback(**kwargs) 2023-03-25T00:48:30,477 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/dunamai/__init__.py", line 970, in from_git 2023-03-25T00:48:30,478 _detect_vcs(Vcs.Git) 2023-03-25T00:48:30,478 File "/tmp/pip-build-env-l1xjrvoy/overlay/lib/python3.9/site-packages/dunamai/__init__.py", line 303, in _detect_vcs 2023-03-25T00:48:30,479 raise RuntimeError( 2023-03-25T00:48:30,479 RuntimeError: This does not appear to be a Git project 2023-03-25T00:48:30,578 ERROR: [present-rich] Preparing metadata (pyproject.toml) exited with 1 2023-03-25T00:48:30,596 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpuibeek4b[/] 2023-03-25T00:48:30,596 [bold magenta]cwd[/]: /tmp/pip-wheel-w1ls712m/biolink-model_bd4d3c589bc64f0184605e39276566e5 2023-03-25T00:48:30,596 Preparing metadata (pyproject.toml): finished with status 'error' 2023-03-25T00:48:30,599 ERROR: [present-rich] metadata generation failed 2023-03-25T00:48:30,605 Exception information: 2023-03-25T00:48:30,605 Traceback (most recent call last): 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata.py", line 35, in generate_metadata 2023-03-25T00:48:30,605 distinfo_dir = backend.prepare_metadata_for_build_wheel(metadata_dir) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/misc.py", line 722, in prepare_metadata_for_build_wheel 2023-03-25T00:48:30,605 return super().prepare_metadata_for_build_wheel( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 186, in prepare_metadata_for_build_wheel 2023-03-25T00:48:30,605 return self._call_hook('prepare_metadata_for_build_wheel', { 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook 2023-03-25T00:48:30,605 self._subprocess_runner( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 252, in runner 2023-03-25T00:48:30,605 call_subprocess( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-03-25T00:48:30,605 raise error 2023-03-25T00:48:30,605 pip._internal.exceptions.InstallationSubprocessError: Preparing metadata (pyproject.toml) exited with 1 2023-03-25T00:48:30,605 2023-03-25T00:48:30,605 The above exception was the direct cause of the following exception: 2023-03-25T00:48:30,605 2023-03-25T00:48:30,605 Traceback (most recent call last): 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2023-03-25T00:48:30,605 status = run_func(*args) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2023-03-25T00:48:30,605 return func(self, options, args) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 170, in run 2023-03-25T00:48:30,605 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-03-25T00:48:30,605 result = self._result = resolver.resolve( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2023-03-25T00:48:30,605 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2023-03-25T00:48:30,605 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria 2023-03-25T00:48:30,605 if not criterion.candidates: 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__ 2023-03-25T00:48:30,605 return bool(self._sequence) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-03-25T00:48:30,605 return any(self) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-03-25T00:48:30,605 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-03-25T00:48:30,605 candidate = func() 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-03-25T00:48:30,605 self._link_candidate_cache[link] = LinkCandidate( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 297, in __init__ 2023-03-25T00:48:30,605 super().__init__( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 162, in __init__ 2023-03-25T00:48:30,605 self.dist = self._prepare() 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 231, in _prepare 2023-03-25T00:48:30,605 dist = self._prepare_distribution() 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 308, in _prepare_distribution 2023-03-25T00:48:30,605 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 491, in prepare_linked_requirement 2023-03-25T00:48:30,605 return self._prepare_linked_requirement(req, parallel_builds) 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 577, in _prepare_linked_requirement 2023-03-25T00:48:30,605 dist = _get_prepared_distribution( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-03-25T00:48:30,605 abstract_dist.prepare_distribution_metadata( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-03-25T00:48:30,605 self.req.prepare_metadata() 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/req/req_install.py", line 539, in prepare_metadata 2023-03-25T00:48:30,605 self.metadata_directory = generate_metadata( 2023-03-25T00:48:30,605 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata.py", line 37, in generate_metadata 2023-03-25T00:48:30,605 raise MetadataGenerationFailed(package_details=details) from error 2023-03-25T00:48:30,605 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-03-25T00:48:30,617 Removed biolink-model==3.2.2 from https://files.pythonhosted.org/packages/f6/53/b2ca8b2e0edce4f04f785b866f8a61a5666ab235a1107549275ad8658e70/biolink-model-3.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-y0_tse7z' 2023-03-25T00:48:30,618 Removed build tracker: '/tmp/pip-build-tracker-y0_tse7z'