2023-03-27T08:06:54,811 Created temporary directory: /tmp/pip-ephem-wheel-cache-qepajvye 2023-03-27T08:06:54,814 Created temporary directory: /tmp/pip-build-tracker-29ow0p88 2023-03-27T08:06:54,814 Initialized build tracking at /tmp/pip-build-tracker-29ow0p88 2023-03-27T08:06:54,814 Created build tracker: /tmp/pip-build-tracker-29ow0p88 2023-03-27T08:06:54,814 Entered build tracker: /tmp/pip-build-tracker-29ow0p88 2023-03-27T08:06:54,815 Created temporary directory: /tmp/pip-wheel-2wx55j1i 2023-03-27T08:06:54,819 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-27T08:06:54,822 Created temporary directory: /tmp/pip-ephem-wheel-cache-0oxv9g5z 2023-03-27T08:06:54,850 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-27T08:06:54,854 2 location(s) to search for versions of pydeseq2: 2023-03-27T08:06:54,854 * https://pypi.org/simple/pydeseq2/ 2023-03-27T08:06:54,854 * https://www.piwheels.org/simple/pydeseq2/ 2023-03-27T08:06:54,854 Fetching project page and analyzing links: https://pypi.org/simple/pydeseq2/ 2023-03-27T08:06:54,855 Getting page https://pypi.org/simple/pydeseq2/ 2023-03-27T08:06:54,856 Found index url https://pypi.org/simple 2023-03-27T08:06:54,908 Fetched page https://pypi.org/simple/pydeseq2/ as application/vnd.pypi.simple.v1+json 2023-03-27T08:06:54,911 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/6a/d8/27fabf02eb93ff3d5738cc2a9e632ce3121e0192fa70ec526978b695f4b3/pydeseq2-0.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,912 Found link https://files.pythonhosted.org/packages/f9/6e/e6330bb9e8587541662ca4c31244e8c648c5ccd2c6e2a8741c44104064fe/pydeseq2-0.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1 2023-03-27T08:06:54,912 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/84/f4/63dccc1353d615b6fe138cc5b9d4131e60f810ffd5f470f7503db1b53ac8/pydeseq2-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,913 Found link https://files.pythonhosted.org/packages/c9/ff/f26e18a599e5bb281dbff538e1574efb82371ffeab31250551af75e66a8c/pydeseq2-0.1.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1.1 2023-03-27T08:06:54,913 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/b4/e5/30779418b356b50396c191bff80616a04b74aac723760d16721eeddf5b77/pydeseq2-0.2.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,913 Found link https://files.pythonhosted.org/packages/3a/7f/b1822adefa98674d9706b37def5de30cb68394107af0088489d6377ea365/pydeseq2-0.2.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.0 2023-03-27T08:06:54,914 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/2b/ad/0d76f6d103b69f051d2e3007eed6e20921c7646f85777cbf9eff4fb97154/pydeseq2-0.2.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,914 Found link https://files.pythonhosted.org/packages/56/e5/c5fdda92bfa028a54c465373bfb776ca3693291d6ab636b1815f8cb55a76/pydeseq2-0.2.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.1 2023-03-27T08:06:54,914 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/d8/a4/368994e23cb21d04fdf1cf831a6c0001bfd494535bb5a7daa71fde8593a0/pydeseq2-0.3.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,915 Found link https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.0 2023-03-27T08:06:54,915 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/75/65/3ce8c3fc9f1c6b8494905b2007f64b4f2263176d5bedf644cd9165ca8f39/pydeseq2-0.3.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:54,916 Found link https://files.pythonhosted.org/packages/43/35/2d38806ae43eb071d4b318381d132f8b9a78f67d3c569b44f9f5576984d2/pydeseq2-0.3.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.1 2023-03-27T08:06:54,916 Fetching project page and analyzing links: https://www.piwheels.org/simple/pydeseq2/ 2023-03-27T08:06:54,916 Getting page https://www.piwheels.org/simple/pydeseq2/ 2023-03-27T08:06:54,917 Found index url https://www.piwheels.org/simple 2023-03-27T08:06:55,069 Fetched page https://www.piwheels.org/simple/pydeseq2/ as text/html 2023-03-27T08:06:55,071 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.3.0-py3-none-any.whl#sha256=44a524b0ae8109930bcabffd5f4d66579bcf231856002cdd23e63459802a257f (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:55,071 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.1-py3-none-any.whl#sha256=9d7edc8169b73a5ecae9697b34b25bfc2a5bff3ace3064304f8984bb9312055b (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:55,072 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.0-py3-none-any.whl#sha256=f220fee41dc6e576bb134683a83411a0ea57a4dde7e8e8e5b575b017a19745c2 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:55,072 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1.1-py3-none-any.whl#sha256=06c9ed7baf025f588298d4475b7cab5dc8bba1b81f10274a8fb1f29ee5b91874 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:55,072 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1-py3-none-any.whl#sha256=7a1eac03527023d591b98915498f03e3b44f498dc2d8e3e52f56b2dfa66a7387 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-03-27T08:06:55,072 Skipping link: not a file: https://www.piwheels.org/simple/pydeseq2/ 2023-03-27T08:06:55,072 Skipping link: not a file: https://pypi.org/simple/pydeseq2/ 2023-03-27T08:06:55,091 Given no hashes to check 1 links for project 'pydeseq2': discarding no candidates 2023-03-27T08:06:55,108 Collecting pydeseq2==0.3.1 2023-03-27T08:06:55,110 Created temporary directory: /tmp/pip-unpack-oidymaa2 2023-03-27T08:06:55,287 Downloading pydeseq2-0.3.1.tar.gz (36 kB) 2023-03-27T08:06:55,352 Added pydeseq2==0.3.1 from https://files.pythonhosted.org/packages/43/35/2d38806ae43eb071d4b318381d132f8b9a78f67d3c569b44f9f5576984d2/pydeseq2-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-29ow0p88' 2023-03-27T08:06:55,356 Created temporary directory: /tmp/pip-build-env-xe7_qzwb 2023-03-27T08:06:55,367 Installing build dependencies: started 2023-03-27T08:06:55,368 Running command pip subprocess to install build dependencies 2023-03-27T08:06:56,613 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-03-27T08:06:57,232 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-03-27T08:06:57,258 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-03-27T08:06:58,926 Collecting setuptools>=40.8.0 2023-03-27T08:06:59,027 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.0-py3-none-any.whl (1.1 MB) 2023-03-27T08:06:59,300 Collecting wheel 2023-03-27T08:06:59,320 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-03-27T08:07:01,478 Installing collected packages: wheel, setuptools 2023-03-27T08:07:01,714 Creating /tmp/pip-build-env-xe7_qzwb/overlay/bin 2023-03-27T08:07:01,717 changing mode of /tmp/pip-build-env-xe7_qzwb/overlay/bin/wheel to 755 2023-03-27T08:07:03,956 Successfully installed setuptools-67.6.0 wheel-0.40.0 2023-03-27T08:07:04,453 Installing build dependencies: finished with status 'done' 2023-03-27T08:07:04,459 Getting requirements to build wheel: started 2023-03-27T08:07:04,460 Running command Getting requirements to build wheel 2023-03-27T08:07:05,035 running egg_info 2023-03-27T08:07:05,040 writing pydeseq2.egg-info/PKG-INFO 2023-03-27T08:07:05,042 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-03-27T08:07:05,045 writing requirements to pydeseq2.egg-info/requires.txt 2023-03-27T08:07:05,046 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-03-27T08:07:05,068 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:05,070 adding license file 'LICENSE' 2023-03-27T08:07:05,072 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:05,135 Getting requirements to build wheel: finished with status 'done' 2023-03-27T08:07:05,145 Created temporary directory: /tmp/pip-modern-metadata-6fr26_5o 2023-03-27T08:07:05,148 Preparing metadata (pyproject.toml): started 2023-03-27T08:07:05,149 Running command Preparing metadata (pyproject.toml) 2023-03-27T08:07:05,677 running dist_info 2023-03-27T08:07:05,698 creating /tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info 2023-03-27T08:07:05,703 writing /tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/PKG-INFO 2023-03-27T08:07:05,705 writing dependency_links to /tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/dependency_links.txt 2023-03-27T08:07:05,708 writing requirements to /tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/requires.txt 2023-03-27T08:07:05,709 writing top-level names to /tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/top_level.txt 2023-03-27T08:07:05,711 writing manifest file '/tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:05,729 reading manifest file '/tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:05,731 adding license file 'LICENSE' 2023-03-27T08:07:05,733 writing manifest file '/tmp/pip-modern-metadata-6fr26_5o/pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:05,734 creating '/tmp/pip-modern-metadata-6fr26_5o/pydeseq2-0.3.1.dist-info' 2023-03-27T08:07:05,906 Preparing metadata (pyproject.toml): finished with status 'done' 2023-03-27T08:07:05,917 Source in /tmp/pip-wheel-2wx55j1i/pydeseq2_b82ee7f301be48d3b48898f71491217d has version 0.3.1, which satisfies requirement pydeseq2==0.3.1 from https://files.pythonhosted.org/packages/43/35/2d38806ae43eb071d4b318381d132f8b9a78f67d3c569b44f9f5576984d2/pydeseq2-0.3.1.tar.gz 2023-03-27T08:07:05,918 Removed pydeseq2==0.3.1 from https://files.pythonhosted.org/packages/43/35/2d38806ae43eb071d4b318381d132f8b9a78f67d3c569b44f9f5576984d2/pydeseq2-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-29ow0p88' 2023-03-27T08:07:05,924 Created temporary directory: /tmp/pip-unpack-4u2g_l5m 2023-03-27T08:07:05,924 Building wheels for collected packages: pydeseq2 2023-03-27T08:07:05,929 Created temporary directory: /tmp/pip-wheel-cd7dqdg2 2023-03-27T08:07:05,930 Destination directory: /tmp/pip-wheel-cd7dqdg2 2023-03-27T08:07:05,932 Building wheel for pydeseq2 (pyproject.toml): started 2023-03-27T08:07:05,933 Running command Building wheel for pydeseq2 (pyproject.toml) 2023-03-27T08:07:06,510 running bdist_wheel 2023-03-27T08:07:06,547 running build 2023-03-27T08:07:06,547 running build_py 2023-03-27T08:07:06,555 creating build 2023-03-27T08:07:06,556 creating build/lib 2023-03-27T08:07:06,557 creating build/lib/pydeseq2 2023-03-27T08:07:06,558 copying pydeseq2/__version__.py -> build/lib/pydeseq2 2023-03-27T08:07:06,560 copying pydeseq2/utils.py -> build/lib/pydeseq2 2023-03-27T08:07:06,564 copying pydeseq2/grid_search.py -> build/lib/pydeseq2 2023-03-27T08:07:06,566 copying pydeseq2/__init__.py -> build/lib/pydeseq2 2023-03-27T08:07:06,569 copying pydeseq2/preprocessing.py -> build/lib/pydeseq2 2023-03-27T08:07:06,570 copying pydeseq2/dds.py -> build/lib/pydeseq2 2023-03-27T08:07:06,574 copying pydeseq2/ds.py -> build/lib/pydeseq2 2023-03-27T08:07:06,593 installing to build/bdist.linux-armv7l/wheel 2023-03-27T08:07:06,593 running install 2023-03-27T08:07:06,619 running install_lib 2023-03-27T08:07:06,626 creating build/bdist.linux-armv7l 2023-03-27T08:07:06,627 creating build/bdist.linux-armv7l/wheel 2023-03-27T08:07:06,629 creating build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,630 copying build/lib/pydeseq2/__version__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,632 copying build/lib/pydeseq2/utils.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,635 copying build/lib/pydeseq2/grid_search.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,637 copying build/lib/pydeseq2/__init__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,639 copying build/lib/pydeseq2/preprocessing.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,641 copying build/lib/pydeseq2/dds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,644 copying build/lib/pydeseq2/ds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-03-27T08:07:06,647 running install_egg_info 2023-03-27T08:07:06,671 running egg_info 2023-03-27T08:07:06,676 writing pydeseq2.egg-info/PKG-INFO 2023-03-27T08:07:06,678 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-03-27T08:07:06,679 writing requirements to pydeseq2.egg-info/requires.txt 2023-03-27T08:07:06,680 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-03-27T08:07:06,688 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:06,690 adding license file 'LICENSE' 2023-03-27T08:07:06,693 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-03-27T08:07:06,695 Copying pydeseq2.egg-info to build/bdist.linux-armv7l/wheel/pydeseq2-0.3.1-py3.9.egg-info 2023-03-27T08:07:06,705 running install_scripts 2023-03-27T08:07:06,724 creating build/bdist.linux-armv7l/wheel/pydeseq2-0.3.1.dist-info/WHEEL 2023-03-27T08:07:06,727 creating '/tmp/pip-wheel-cd7dqdg2/.tmp-4roae685/pydeseq2-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-03-27T08:07:06,729 adding 'pydeseq2/__init__.py' 2023-03-27T08:07:06,730 adding 'pydeseq2/__version__.py' 2023-03-27T08:07:06,735 adding 'pydeseq2/dds.py' 2023-03-27T08:07:06,738 adding 'pydeseq2/ds.py' 2023-03-27T08:07:06,740 adding 'pydeseq2/grid_search.py' 2023-03-27T08:07:06,741 adding 'pydeseq2/preprocessing.py' 2023-03-27T08:07:06,746 adding 'pydeseq2/utils.py' 2023-03-27T08:07:06,748 adding 'pydeseq2-0.3.1.dist-info/LICENSE' 2023-03-27T08:07:06,750 adding 'pydeseq2-0.3.1.dist-info/METADATA' 2023-03-27T08:07:06,751 adding 'pydeseq2-0.3.1.dist-info/WHEEL' 2023-03-27T08:07:06,752 adding 'pydeseq2-0.3.1.dist-info/top_level.txt' 2023-03-27T08:07:06,753 adding 'pydeseq2-0.3.1.dist-info/RECORD' 2023-03-27T08:07:06,754 removing build/bdist.linux-armv7l/wheel 2023-03-27T08:07:06,834 Building wheel for pydeseq2 (pyproject.toml): finished with status 'done' 2023-03-27T08:07:06,840 Created wheel for pydeseq2: filename=pydeseq2-0.3.1-py3-none-any.whl size=32086 sha256=f823ca862fd73e4e89704e031a30430973dfe914298e4e5c97392b81249d4e94 2023-03-27T08:07:06,841 Stored in directory: /tmp/pip-ephem-wheel-cache-0oxv9g5z/wheels/0a/54/1d/a7b46b01c034a74fe8ade3a336c95c967db7b5ea7d51892718 2023-03-27T08:07:06,853 Successfully built pydeseq2 2023-03-27T08:07:06,858 Removed build tracker: '/tmp/pip-build-tracker-29ow0p88'