2023-04-03T09:06:51,522 Created temporary directory: /tmp/pip-ephem-wheel-cache-r9y9su2o 2023-04-03T09:06:51,525 Created temporary directory: /tmp/pip-build-tracker-ltqk0qtu 2023-04-03T09:06:51,525 Initialized build tracking at /tmp/pip-build-tracker-ltqk0qtu 2023-04-03T09:06:51,525 Created build tracker: /tmp/pip-build-tracker-ltqk0qtu 2023-04-03T09:06:51,525 Entered build tracker: /tmp/pip-build-tracker-ltqk0qtu 2023-04-03T09:06:51,526 Created temporary directory: /tmp/pip-wheel-j_ipw15f 2023-04-03T09:06:51,530 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-03T09:06:51,533 Created temporary directory: /tmp/pip-ephem-wheel-cache-pbtkcwen 2023-04-03T09:06:51,558 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-03T09:06:51,561 2 location(s) to search for versions of pydeseq2: 2023-04-03T09:06:51,561 * https://pypi.org/simple/pydeseq2/ 2023-04-03T09:06:51,561 * https://www.piwheels.org/simple/pydeseq2/ 2023-04-03T09:06:51,562 Fetching project page and analyzing links: https://pypi.org/simple/pydeseq2/ 2023-04-03T09:06:51,562 Getting page https://pypi.org/simple/pydeseq2/ 2023-04-03T09:06:51,564 Found index url https://pypi.org/simple 2023-04-03T09:06:51,617 Fetched page https://pypi.org/simple/pydeseq2/ as application/vnd.pypi.simple.v1+json 2023-04-03T09:06:51,620 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/6a/d8/27fabf02eb93ff3d5738cc2a9e632ce3121e0192fa70ec526978b695f4b3/pydeseq2-0.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,621 Found link https://files.pythonhosted.org/packages/f9/6e/e6330bb9e8587541662ca4c31244e8c648c5ccd2c6e2a8741c44104064fe/pydeseq2-0.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1 2023-04-03T09:06:51,621 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/84/f4/63dccc1353d615b6fe138cc5b9d4131e60f810ffd5f470f7503db1b53ac8/pydeseq2-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,622 Found link https://files.pythonhosted.org/packages/c9/ff/f26e18a599e5bb281dbff538e1574efb82371ffeab31250551af75e66a8c/pydeseq2-0.1.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.1.1 2023-04-03T09:06:51,622 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/b4/e5/30779418b356b50396c191bff80616a04b74aac723760d16721eeddf5b77/pydeseq2-0.2.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,623 Found link https://files.pythonhosted.org/packages/3a/7f/b1822adefa98674d9706b37def5de30cb68394107af0088489d6377ea365/pydeseq2-0.2.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.0 2023-04-03T09:06:51,623 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/2b/ad/0d76f6d103b69f051d2e3007eed6e20921c7646f85777cbf9eff4fb97154/pydeseq2-0.2.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,624 Found link https://files.pythonhosted.org/packages/56/e5/c5fdda92bfa028a54c465373bfb776ca3693291d6ab636b1815f8cb55a76/pydeseq2-0.2.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.2.1 2023-04-03T09:06:51,624 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/d8/a4/368994e23cb21d04fdf1cf831a6c0001bfd494535bb5a7daa71fde8593a0/pydeseq2-0.3.0-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,624 Found link https://files.pythonhosted.org/packages/fb/7c/718672c4521c1471e4c02bf0e8c42939424ea64110f6bbdf0337bb4f0027/pydeseq2-0.3.0.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.0 2023-04-03T09:06:51,625 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/75/65/3ce8c3fc9f1c6b8494905b2007f64b4f2263176d5bedf644cd9165ca8f39/pydeseq2-0.3.1-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,625 Found link https://files.pythonhosted.org/packages/43/35/2d38806ae43eb071d4b318381d132f8b9a78f67d3c569b44f9f5576984d2/pydeseq2-0.3.1.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.1 2023-04-03T09:06:51,625 Skipping link: No binaries permitted for pydeseq2: https://files.pythonhosted.org/packages/c3/bf/5f7f5be8304288f71af7294ccc7475e75467ecc67bd62bf33b70dab378d0/pydeseq2-0.3.2-py3-none-any.whl (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,626 Found link https://files.pythonhosted.org/packages/ad/1a/06b710bc303c96536ca3b72d2424bb2a6857daacd6270bbec8beba741ac8/pydeseq2-0.3.2.tar.gz (from https://pypi.org/simple/pydeseq2/) (requires-python:>=3.8.0), version: 0.3.2 2023-04-03T09:06:51,626 Fetching project page and analyzing links: https://www.piwheels.org/simple/pydeseq2/ 2023-04-03T09:06:51,627 Getting page https://www.piwheels.org/simple/pydeseq2/ 2023-04-03T09:06:51,628 Found index url https://www.piwheels.org/simple 2023-04-03T09:06:51,856 Fetched page https://www.piwheels.org/simple/pydeseq2/ as text/html 2023-04-03T09:06:51,859 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.3.1-py3-none-any.whl#sha256=f823ca862fd73e4e89704e031a30430973dfe914298e4e5c97392b81249d4e94 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,859 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.3.0-py3-none-any.whl#sha256=44a524b0ae8109930bcabffd5f4d66579bcf231856002cdd23e63459802a257f (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,859 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.1-py3-none-any.whl#sha256=9d7edc8169b73a5ecae9697b34b25bfc2a5bff3ace3064304f8984bb9312055b (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,859 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.2.0-py3-none-any.whl#sha256=f220fee41dc6e576bb134683a83411a0ea57a4dde7e8e8e5b575b017a19745c2 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,859 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1.1-py3-none-any.whl#sha256=06c9ed7baf025f588298d4475b7cab5dc8bba1b81f10274a8fb1f29ee5b91874 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,860 Skipping link: No binaries permitted for pydeseq2: https://www.piwheels.org/simple/pydeseq2/pydeseq2-0.1-py3-none-any.whl#sha256=7a1eac03527023d591b98915498f03e3b44f498dc2d8e3e52f56b2dfa66a7387 (from https://www.piwheels.org/simple/pydeseq2/) (requires-python:>=3.8.0) 2023-04-03T09:06:51,860 Skipping link: not a file: https://www.piwheels.org/simple/pydeseq2/ 2023-04-03T09:06:51,860 Skipping link: not a file: https://pypi.org/simple/pydeseq2/ 2023-04-03T09:06:51,879 Given no hashes to check 1 links for project 'pydeseq2': discarding no candidates 2023-04-03T09:06:51,896 Collecting pydeseq2==0.3.2 2023-04-03T09:06:51,898 Created temporary directory: /tmp/pip-unpack-xwh9tv3q 2023-04-03T09:06:52,070 Downloading pydeseq2-0.3.2.tar.gz (37 kB) 2023-04-03T09:06:52,131 Added pydeseq2==0.3.2 from https://files.pythonhosted.org/packages/ad/1a/06b710bc303c96536ca3b72d2424bb2a6857daacd6270bbec8beba741ac8/pydeseq2-0.3.2.tar.gz to build tracker '/tmp/pip-build-tracker-ltqk0qtu' 2023-04-03T09:06:52,136 Created temporary directory: /tmp/pip-build-env-uij1vcfv 2023-04-03T09:06:52,147 Installing build dependencies: started 2023-04-03T09:06:52,148 Running command pip subprocess to install build dependencies 2023-04-03T09:06:53,406 Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-04-03T09:06:54,039 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-03T09:06:54,064 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-03T09:06:55,742 Collecting setuptools>=40.8.0 2023-04-03T09:06:55,863 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.1-py3-none-any.whl (1.1 MB) 2023-04-03T09:06:56,131 Collecting wheel 2023-04-03T09:06:56,150 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-04-03T09:06:58,319 Installing collected packages: wheel, setuptools 2023-04-03T09:06:58,566 Creating /tmp/pip-build-env-uij1vcfv/overlay/bin 2023-04-03T09:06:58,568 changing mode of /tmp/pip-build-env-uij1vcfv/overlay/bin/wheel to 755 2023-04-03T09:07:00,815 Successfully installed setuptools-67.6.1 wheel-0.40.0 2023-04-03T09:07:01,311 Installing build dependencies: finished with status 'done' 2023-04-03T09:07:01,317 Getting requirements to build wheel: started 2023-04-03T09:07:01,318 Running command Getting requirements to build wheel 2023-04-03T09:07:01,912 running egg_info 2023-04-03T09:07:01,917 writing pydeseq2.egg-info/PKG-INFO 2023-04-03T09:07:01,920 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-04-03T09:07:01,922 writing requirements to pydeseq2.egg-info/requires.txt 2023-04-03T09:07:01,923 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-04-03T09:07:01,943 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:01,945 adding license file 'LICENSE' 2023-04-03T09:07:01,948 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:02,010 Getting requirements to build wheel: finished with status 'done' 2023-04-03T09:07:02,020 Created temporary directory: /tmp/pip-modern-metadata-pzxhupw8 2023-04-03T09:07:02,026 Preparing metadata (pyproject.toml): started 2023-04-03T09:07:02,027 Running command Preparing metadata (pyproject.toml) 2023-04-03T09:07:02,569 running dist_info 2023-04-03T09:07:02,588 creating /tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info 2023-04-03T09:07:02,592 writing /tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/PKG-INFO 2023-04-03T09:07:02,595 writing dependency_links to /tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/dependency_links.txt 2023-04-03T09:07:02,597 writing requirements to /tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/requires.txt 2023-04-03T09:07:02,598 writing top-level names to /tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/top_level.txt 2023-04-03T09:07:02,600 writing manifest file '/tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:02,617 reading manifest file '/tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:02,620 adding license file 'LICENSE' 2023-04-03T09:07:02,622 writing manifest file '/tmp/pip-modern-metadata-pzxhupw8/pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:02,623 creating '/tmp/pip-modern-metadata-pzxhupw8/pydeseq2-0.3.2.dist-info' 2023-04-03T09:07:02,790 Preparing metadata (pyproject.toml): finished with status 'done' 2023-04-03T09:07:02,797 Source in /tmp/pip-wheel-j_ipw15f/pydeseq2_2802edfaec86405a932ed33e67dd29f5 has version 0.3.2, which satisfies requirement pydeseq2==0.3.2 from https://files.pythonhosted.org/packages/ad/1a/06b710bc303c96536ca3b72d2424bb2a6857daacd6270bbec8beba741ac8/pydeseq2-0.3.2.tar.gz 2023-04-03T09:07:02,798 Removed pydeseq2==0.3.2 from https://files.pythonhosted.org/packages/ad/1a/06b710bc303c96536ca3b72d2424bb2a6857daacd6270bbec8beba741ac8/pydeseq2-0.3.2.tar.gz from build tracker '/tmp/pip-build-tracker-ltqk0qtu' 2023-04-03T09:07:02,805 Created temporary directory: /tmp/pip-unpack-4f7v_5fn 2023-04-03T09:07:02,805 Building wheels for collected packages: pydeseq2 2023-04-03T09:07:02,810 Created temporary directory: /tmp/pip-wheel-fuvz18u5 2023-04-03T09:07:02,810 Destination directory: /tmp/pip-wheel-fuvz18u5 2023-04-03T09:07:02,812 Building wheel for pydeseq2 (pyproject.toml): started 2023-04-03T09:07:02,813 Running command Building wheel for pydeseq2 (pyproject.toml) 2023-04-03T09:07:03,392 running bdist_wheel 2023-04-03T09:07:03,428 running build 2023-04-03T09:07:03,428 running build_py 2023-04-03T09:07:03,436 creating build 2023-04-03T09:07:03,437 creating build/lib 2023-04-03T09:07:03,437 creating build/lib/pydeseq2 2023-04-03T09:07:03,439 copying pydeseq2/__version__.py -> build/lib/pydeseq2 2023-04-03T09:07:03,441 copying pydeseq2/utils.py -> build/lib/pydeseq2 2023-04-03T09:07:03,444 copying pydeseq2/grid_search.py -> build/lib/pydeseq2 2023-04-03T09:07:03,447 copying pydeseq2/__init__.py -> build/lib/pydeseq2 2023-04-03T09:07:03,449 copying pydeseq2/preprocessing.py -> build/lib/pydeseq2 2023-04-03T09:07:03,450 copying pydeseq2/dds.py -> build/lib/pydeseq2 2023-04-03T09:07:03,454 copying pydeseq2/ds.py -> build/lib/pydeseq2 2023-04-03T09:07:03,473 installing to build/bdist.linux-armv7l/wheel 2023-04-03T09:07:03,473 running install 2023-04-03T09:07:03,499 running install_lib 2023-04-03T09:07:03,506 creating build/bdist.linux-armv7l 2023-04-03T09:07:03,507 creating build/bdist.linux-armv7l/wheel 2023-04-03T09:07:03,509 creating build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,510 copying build/lib/pydeseq2/__version__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,512 copying build/lib/pydeseq2/utils.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,516 copying build/lib/pydeseq2/grid_search.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,518 copying build/lib/pydeseq2/__init__.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,520 copying build/lib/pydeseq2/preprocessing.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,522 copying build/lib/pydeseq2/dds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,525 copying build/lib/pydeseq2/ds.py -> build/bdist.linux-armv7l/wheel/pydeseq2 2023-04-03T09:07:03,528 running install_egg_info 2023-04-03T09:07:03,553 running egg_info 2023-04-03T09:07:03,557 writing pydeseq2.egg-info/PKG-INFO 2023-04-03T09:07:03,559 writing dependency_links to pydeseq2.egg-info/dependency_links.txt 2023-04-03T09:07:03,561 writing requirements to pydeseq2.egg-info/requires.txt 2023-04-03T09:07:03,562 writing top-level names to pydeseq2.egg-info/top_level.txt 2023-04-03T09:07:03,570 reading manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:03,572 adding license file 'LICENSE' 2023-04-03T09:07:03,574 writing manifest file 'pydeseq2.egg-info/SOURCES.txt' 2023-04-03T09:07:03,576 Copying pydeseq2.egg-info to build/bdist.linux-armv7l/wheel/pydeseq2-0.3.2-py3.9.egg-info 2023-04-03T09:07:03,588 running install_scripts 2023-04-03T09:07:03,607 creating build/bdist.linux-armv7l/wheel/pydeseq2-0.3.2.dist-info/WHEEL 2023-04-03T09:07:03,610 creating '/tmp/pip-wheel-fuvz18u5/.tmp-99z_1w_e/pydeseq2-0.3.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-03T09:07:03,613 adding 'pydeseq2/__init__.py' 2023-04-03T09:07:03,614 adding 'pydeseq2/__version__.py' 2023-04-03T09:07:03,619 adding 'pydeseq2/dds.py' 2023-04-03T09:07:03,622 adding 'pydeseq2/ds.py' 2023-04-03T09:07:03,624 adding 'pydeseq2/grid_search.py' 2023-04-03T09:07:03,625 adding 'pydeseq2/preprocessing.py' 2023-04-03T09:07:03,630 adding 'pydeseq2/utils.py' 2023-04-03T09:07:03,632 adding 'pydeseq2-0.3.2.dist-info/LICENSE' 2023-04-03T09:07:03,634 adding 'pydeseq2-0.3.2.dist-info/METADATA' 2023-04-03T09:07:03,635 adding 'pydeseq2-0.3.2.dist-info/WHEEL' 2023-04-03T09:07:03,636 adding 'pydeseq2-0.3.2.dist-info/top_level.txt' 2023-04-03T09:07:03,637 adding 'pydeseq2-0.3.2.dist-info/RECORD' 2023-04-03T09:07:03,639 removing build/bdist.linux-armv7l/wheel 2023-04-03T09:07:03,719 Building wheel for pydeseq2 (pyproject.toml): finished with status 'done' 2023-04-03T09:07:03,726 Created wheel for pydeseq2: filename=pydeseq2-0.3.2-py3-none-any.whl size=32153 sha256=f801726d438d1a12dcd143300b2557b7ffe088f83c221fd3975ccb3c7efadf73 2023-04-03T09:07:03,727 Stored in directory: /tmp/pip-ephem-wheel-cache-pbtkcwen/wheels/25/8c/c8/7b4261e7a6104ed95a43acfadf36bfd632c2c3ab74fd0a34c2 2023-04-03T09:07:03,740 Successfully built pydeseq2 2023-04-03T09:07:03,745 Removed build tracker: '/tmp/pip-build-tracker-ltqk0qtu'