2023-04-03T09:21:40,912 Created temporary directory: /tmp/pip-ephem-wheel-cache-hnewmecl 2023-04-03T09:21:40,918 Created temporary directory: /tmp/pip-build-tracker-s_d0p5vy 2023-04-03T09:21:40,919 Initialized build tracking at /tmp/pip-build-tracker-s_d0p5vy 2023-04-03T09:21:40,919 Created build tracker: /tmp/pip-build-tracker-s_d0p5vy 2023-04-03T09:21:40,919 Entered build tracker: /tmp/pip-build-tracker-s_d0p5vy 2023-04-03T09:21:40,921 Created temporary directory: /tmp/pip-wheel-9vt29m5w 2023-04-03T09:21:40,930 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-03T09:21:40,937 Created temporary directory: /tmp/pip-ephem-wheel-cache-71kcmta_ 2023-04-03T09:21:40,990 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-03T09:21:40,997 2 location(s) to search for versions of kmergenetyper: 2023-04-03T09:21:40,997 * https://pypi.org/simple/kmergenetyper/ 2023-04-03T09:21:40,997 * https://www.piwheels.org/simple/kmergenetyper/ 2023-04-03T09:21:40,998 Fetching project page and analyzing links: https://pypi.org/simple/kmergenetyper/ 2023-04-03T09:21:40,999 Getting page https://pypi.org/simple/kmergenetyper/ 2023-04-03T09:21:41,003 Found index url https://pypi.org/simple 2023-04-03T09:21:41,188 Fetched page https://pypi.org/simple/kmergenetyper/ as application/vnd.pypi.simple.v1+json 2023-04-03T09:21:41,190 Found link https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.0 2023-04-03T09:21:41,191 Fetching project page and analyzing links: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-03T09:21:41,191 Getting page https://www.piwheels.org/simple/kmergenetyper/ 2023-04-03T09:21:41,193 Found index url https://www.piwheels.org/simple 2023-04-03T09:21:41,427 Fetched page https://www.piwheels.org/simple/kmergenetyper/ as text/html 2023-04-03T09:21:41,429 Skipping link: not a file: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-03T09:21:41,429 Skipping link: not a file: https://pypi.org/simple/kmergenetyper/ 2023-04-03T09:21:41,462 Given no hashes to check 1 links for project 'kmergenetyper': discarding no candidates 2023-04-03T09:21:41,492 Collecting kmergenetyper==1.0.0 2023-04-03T09:21:41,497 Created temporary directory: /tmp/pip-unpack-dqumruz9 2023-04-03T09:21:41,726 Downloading kmergenetyper-1.0.0.tar.gz (7.5 kB) 2023-04-03T09:21:41,813 Added kmergenetyper==1.0.0 from https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-s_d0p5vy' 2023-04-03T09:21:41,816 Running setup.py (path:/tmp/pip-wheel-9vt29m5w/kmergenetyper_a243e6b680784c989a1064838f4fff53/setup.py) egg_info for package kmergenetyper 2023-04-03T09:21:41,818 Created temporary directory: /tmp/pip-pip-egg-info-s121uivi 2023-04-03T09:21:41,818 Preparing metadata (setup.py): started 2023-04-03T09:21:41,820 Running command python setup.py egg_info 2023-04-03T09:21:43,372 running egg_info 2023-04-03T09:21:43,381 creating /tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info 2023-04-03T09:21:43,451 writing /tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/PKG-INFO 2023-04-03T09:21:43,456 writing dependency_links to /tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/dependency_links.txt 2023-04-03T09:21:43,461 writing top-level names to /tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/top_level.txt 2023-04-03T09:21:43,464 writing manifest file '/tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/SOURCES.txt' 2023-04-03T09:21:43,763 reading manifest file '/tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/SOURCES.txt' 2023-04-03T09:21:43,767 adding license file 'LICENSE' 2023-04-03T09:21:43,772 writing manifest file '/tmp/pip-pip-egg-info-s121uivi/kmergenetyper.egg-info/SOURCES.txt' 2023-04-03T09:21:43,891 Preparing metadata (setup.py): finished with status 'done' 2023-04-03T09:21:43,902 Source in /tmp/pip-wheel-9vt29m5w/kmergenetyper_a243e6b680784c989a1064838f4fff53 has version 1.0.0, which satisfies requirement kmergenetyper==1.0.0 from https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz 2023-04-03T09:21:43,904 Removed kmergenetyper==1.0.0 from https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-s_d0p5vy' 2023-04-03T09:21:43,913 Created temporary directory: /tmp/pip-unpack-kt7rzp7z 2023-04-03T09:21:43,914 Building wheels for collected packages: kmergenetyper 2023-04-03T09:21:43,923 Created temporary directory: /tmp/pip-wheel-u4k15ecm 2023-04-03T09:21:43,924 Building wheel for kmergenetyper (setup.py): started 2023-04-03T09:21:43,926 Destination directory: /tmp/pip-wheel-u4k15ecm 2023-04-03T09:21:43,926 Running command python setup.py bdist_wheel 2023-04-03T09:21:45,995 running bdist_wheel 2023-04-03T09:21:46,207 running build 2023-04-03T09:21:46,207 running build_py 2023-04-03T09:21:46,284 creating build 2023-04-03T09:21:46,285 creating build/lib 2023-04-03T09:21:46,286 creating build/lib/kgt 2023-04-03T09:21:46,289 copying kgt/version.py -> build/lib/kgt 2023-04-03T09:21:46,293 copying kgt/typeGenes.py -> build/lib/kgt 2023-04-03T09:21:46,296 copying kgt/__init__.py -> build/lib/kgt 2023-04-03T09:21:46,299 copying kgt/kma.py -> build/lib/kgt 2023-04-03T09:21:46,303 copying kgt/realignConsensus.py -> build/lib/kgt 2023-04-03T09:21:46,306 running egg_info 2023-04-03T09:21:46,470 writing kmergenetyper.egg-info/PKG-INFO 2023-04-03T09:21:46,474 writing dependency_links to kmergenetyper.egg-info/dependency_links.txt 2023-04-03T09:21:46,479 writing top-level names to kmergenetyper.egg-info/top_level.txt 2023-04-03T09:21:46,554 reading manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-03T09:21:46,558 adding license file 'LICENSE' 2023-04-03T09:21:46,563 writing manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-03T09:21:46,568 running build_scripts 2023-04-03T09:21:46,569 creating build/scripts-3.7 2023-04-03T09:21:46,571 copying and adjusting bin/kgt -> build/scripts-3.7 2023-04-03T09:21:46,574 changing mode of build/scripts-3.7/kgt from 644 to 755 2023-04-03T09:21:46,652 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-03T09:21:46,653 setuptools.SetuptoolsDeprecationWarning, 2023-04-03T09:21:46,729 installing to build/bdist.linux-armv7l/wheel 2023-04-03T09:21:46,729 running install 2023-04-03T09:21:46,789 running install_lib 2023-04-03T09:21:46,865 creating build/bdist.linux-armv7l 2023-04-03T09:21:46,866 creating build/bdist.linux-armv7l/wheel 2023-04-03T09:21:46,870 creating build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,872 copying build/lib/kgt/version.py -> build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,877 copying build/lib/kgt/typeGenes.py -> build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,880 copying build/lib/kgt/__init__.py -> build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,884 copying build/lib/kgt/kma.py -> build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,888 copying build/lib/kgt/realignConsensus.py -> build/bdist.linux-armv7l/wheel/kgt 2023-04-03T09:21:46,891 running install_egg_info 2023-04-03T09:21:46,974 Copying kmergenetyper.egg-info to build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0-py3.7.egg-info 2023-04-03T09:21:46,990 running install_scripts 2023-04-03T09:21:46,992 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0.data 2023-04-03T09:21:46,993 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0.data/scripts 2023-04-03T09:21:46,995 copying build/scripts-3.7/kgt -> build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0.data/scripts 2023-04-03T09:21:46,999 changing mode of build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0.data/scripts/kgt to 755 2023-04-03T09:21:47,024 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-04-03T09:21:47,032 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.0.dist-info/WHEEL 2023-04-03T09:21:47,037 creating '/tmp/pip-wheel-u4k15ecm/kmergenetyper-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-03T09:21:47,042 adding 'kgt/__init__.py' 2023-04-03T09:21:47,045 adding 'kgt/kma.py' 2023-04-03T09:21:47,048 adding 'kgt/realignConsensus.py' 2023-04-03T09:21:47,051 adding 'kgt/typeGenes.py' 2023-04-03T09:21:47,053 adding 'kgt/version.py' 2023-04-03T09:21:47,058 adding 'kmergenetyper-1.0.0.data/scripts/kgt' 2023-04-03T09:21:47,065 adding 'kmergenetyper-1.0.0.dist-info/LICENSE' 2023-04-03T09:21:47,067 adding 'kmergenetyper-1.0.0.dist-info/METADATA' 2023-04-03T09:21:47,069 adding 'kmergenetyper-1.0.0.dist-info/WHEEL' 2023-04-03T09:21:47,071 adding 'kmergenetyper-1.0.0.dist-info/top_level.txt' 2023-04-03T09:21:47,072 adding 'kmergenetyper-1.0.0.dist-info/RECORD' 2023-04-03T09:21:47,075 removing build/bdist.linux-armv7l/wheel 2023-04-03T09:21:47,232 Building wheel for kmergenetyper (setup.py): finished with status 'done' 2023-04-03T09:21:47,240 Created wheel for kmergenetyper: filename=kmergenetyper-1.0.0-py3-none-any.whl size=8592 sha256=f9349c95e0500e10963c0c41b8419305a344ceda1e21cd271ff2ac1b6e0652f6 2023-04-03T09:21:47,242 Stored in directory: /tmp/pip-ephem-wheel-cache-71kcmta_/wheels/1b/35/6c/3b095fc277006f7b31ee27a53e30c7e57c5269322fb112c598 2023-04-03T09:21:47,267 Successfully built kmergenetyper 2023-04-03T09:21:47,274 Removed build tracker: '/tmp/pip-build-tracker-s_d0p5vy'