2023-04-03T10:39:19,073 Created temporary directory: /tmp/pip-ephem-wheel-cache-4ddjbypk
2023-04-03T10:39:19,078 Created temporary directory: /tmp/pip-build-tracker-3_wve6ve
2023-04-03T10:39:19,079 Initialized build tracking at /tmp/pip-build-tracker-3_wve6ve
2023-04-03T10:39:19,080 Created build tracker: /tmp/pip-build-tracker-3_wve6ve
2023-04-03T10:39:19,080 Entered build tracker: /tmp/pip-build-tracker-3_wve6ve
2023-04-03T10:39:19,081 Created temporary directory: /tmp/pip-wheel-ql285n7t
2023-04-03T10:39:19,092 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-04-03T10:39:19,097 Created temporary directory: /tmp/pip-ephem-wheel-cache-rjryrjes
2023-04-03T10:39:19,156 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-04-03T10:39:19,163 2 location(s) to search for versions of kmergenetyper:
2023-04-03T10:39:19,163 * https://pypi.org/simple/kmergenetyper/
2023-04-03T10:39:19,163 * https://www.piwheels.org/simple/kmergenetyper/
2023-04-03T10:39:19,164 Fetching project page and analyzing links: https://pypi.org/simple/kmergenetyper/
2023-04-03T10:39:19,165 Getting page https://pypi.org/simple/kmergenetyper/
2023-04-03T10:39:19,168 Found index url https://pypi.org/simple
2023-04-03T10:39:19,397 Fetched page https://pypi.org/simple/kmergenetyper/ as application/vnd.pypi.simple.v1+json
2023-04-03T10:39:19,399   Found link https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.0
2023-04-03T10:39:19,400   Found link https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.1
2023-04-03T10:39:19,401 Fetching project page and analyzing links: https://www.piwheels.org/simple/kmergenetyper/
2023-04-03T10:39:19,402 Getting page https://www.piwheels.org/simple/kmergenetyper/
2023-04-03T10:39:19,404 Found index url https://www.piwheels.org/simple
2023-04-03T10:39:19,609 Fetched page https://www.piwheels.org/simple/kmergenetyper/ as text/html
2023-04-03T10:39:19,612   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.0-py3-none-any.whl#sha256=f9349c95e0500e10963c0c41b8419305a344ceda1e21cd271ff2ac1b6e0652f6 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-04-03T10:39:19,612 Skipping link: not a file: https://www.piwheels.org/simple/kmergenetyper/
2023-04-03T10:39:19,613 Skipping link: not a file: https://pypi.org/simple/kmergenetyper/
2023-04-03T10:39:19,646 Given no hashes to check 1 links for project 'kmergenetyper': discarding no candidates
2023-04-03T10:39:19,676 Collecting kmergenetyper==1.0.1
2023-04-03T10:39:19,681   Created temporary directory: /tmp/pip-unpack-niryb25w
2023-04-03T10:39:19,919   Downloading kmergenetyper-1.0.1.tar.gz (7.5 kB)
2023-04-03T10:39:20,001   Added kmergenetyper==1.0.1 from https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-3_wve6ve'
2023-04-03T10:39:20,004   Running setup.py (path:/tmp/pip-wheel-ql285n7t/kmergenetyper_bdfeda13fbe148b182c6f8124e0e50e4/setup.py) egg_info for package kmergenetyper
2023-04-03T10:39:20,007   Created temporary directory: /tmp/pip-pip-egg-info-2y6lo08y
2023-04-03T10:39:20,008   Preparing metadata (setup.py): started
2023-04-03T10:39:20,010   Running command python setup.py egg_info
2023-04-03T10:39:21,654   running egg_info
2023-04-03T10:39:21,663   creating /tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info
2023-04-03T10:39:21,758   writing /tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/PKG-INFO
2023-04-03T10:39:21,762   writing dependency_links to /tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/dependency_links.txt
2023-04-03T10:39:21,767   writing top-level names to /tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/top_level.txt
2023-04-03T10:39:21,770   writing manifest file '/tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/SOURCES.txt'
2023-04-03T10:39:22,174   reading manifest file '/tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/SOURCES.txt'
2023-04-03T10:39:22,178   adding license file 'LICENSE'
2023-04-03T10:39:22,183   writing manifest file '/tmp/pip-pip-egg-info-2y6lo08y/kmergenetyper.egg-info/SOURCES.txt'
2023-04-03T10:39:22,302   Preparing metadata (setup.py): finished with status 'done'
2023-04-03T10:39:22,312   Source in /tmp/pip-wheel-ql285n7t/kmergenetyper_bdfeda13fbe148b182c6f8124e0e50e4 has version 1.0.1, which satisfies requirement kmergenetyper==1.0.1 from https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz
2023-04-03T10:39:22,314   Removed kmergenetyper==1.0.1 from https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-3_wve6ve'
2023-04-03T10:39:22,323 Created temporary directory: /tmp/pip-unpack-iolxgt1s
2023-04-03T10:39:22,324 Building wheels for collected packages: kmergenetyper
2023-04-03T10:39:22,333   Created temporary directory: /tmp/pip-wheel-8ki2yqxl
2023-04-03T10:39:22,333   Building wheel for kmergenetyper (setup.py): started
2023-04-03T10:39:22,335   Destination directory: /tmp/pip-wheel-8ki2yqxl
2023-04-03T10:39:22,336   Running command python setup.py bdist_wheel
2023-04-03T10:39:24,634   running bdist_wheel
2023-04-03T10:39:24,915   running build
2023-04-03T10:39:24,916   running build_py
2023-04-03T10:39:25,016   creating build
2023-04-03T10:39:25,018   creating build/lib
2023-04-03T10:39:25,020   creating build/lib/kmergenetyper
2023-04-03T10:39:25,023   copying kmergenetyper/version.py -> build/lib/kmergenetyper
2023-04-03T10:39:25,028   copying kmergenetyper/realignConsensus.py -> build/lib/kmergenetyper
2023-04-03T10:39:25,032   copying kmergenetyper/kma.py -> build/lib/kmergenetyper
2023-04-03T10:39:25,036   copying kmergenetyper/typeGenes.py -> build/lib/kmergenetyper
2023-04-03T10:39:25,039   copying kmergenetyper/__init__.py -> build/lib/kmergenetyper
2023-04-03T10:39:25,041   running egg_info
2023-04-03T10:39:25,257   writing kmergenetyper.egg-info/PKG-INFO
2023-04-03T10:39:25,260   writing dependency_links to kmergenetyper.egg-info/dependency_links.txt
2023-04-03T10:39:25,265   writing top-level names to kmergenetyper.egg-info/top_level.txt
2023-04-03T10:39:25,363   reading manifest file 'kmergenetyper.egg-info/SOURCES.txt'
2023-04-03T10:39:25,367   adding license file 'LICENSE'
2023-04-03T10:39:25,373   writing manifest file 'kmergenetyper.egg-info/SOURCES.txt'
2023-04-03T10:39:25,378   running build_scripts
2023-04-03T10:39:25,379   creating build/scripts-3.7
2023-04-03T10:39:25,381   copying and adjusting bin/kmergenetyper -> build/scripts-3.7
2023-04-03T10:39:25,384   changing mode of build/scripts-3.7/kmergenetyper from 644 to 755
2023-04-03T10:39:25,485   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-04-03T10:39:25,486     setuptools.SetuptoolsDeprecationWarning,
2023-04-03T10:39:25,579   installing to build/bdist.linux-armv7l/wheel
2023-04-03T10:39:25,580   running install
2023-04-03T10:39:25,639   running install_lib
2023-04-03T10:39:25,736   creating build/bdist.linux-armv7l
2023-04-03T10:39:25,737   creating build/bdist.linux-armv7l/wheel
2023-04-03T10:39:25,740   creating build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,742   copying build/lib/kmergenetyper/version.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,746   copying build/lib/kmergenetyper/realignConsensus.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,750   copying build/lib/kmergenetyper/kma.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,754   copying build/lib/kmergenetyper/typeGenes.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,758   copying build/lib/kmergenetyper/__init__.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-04-03T10:39:25,761   running install_egg_info
2023-04-03T10:39:25,867   Copying kmergenetyper.egg-info to build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1-py3.7.egg-info
2023-04-03T10:39:25,884   running install_scripts
2023-04-03T10:39:25,886   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1.data
2023-04-03T10:39:25,887   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1.data/scripts
2023-04-03T10:39:25,890   copying build/scripts-3.7/kmergenetyper -> build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1.data/scripts
2023-04-03T10:39:25,893   changing mode of build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1.data/scripts/kmergenetyper to 755
2023-04-03T10:39:25,917   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2023-04-03T10:39:25,926   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.1.dist-info/WHEEL
2023-04-03T10:39:25,931   creating '/tmp/pip-wheel-8ki2yqxl/kmergenetyper-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-04-03T10:39:25,936   adding 'kmergenetyper/__init__.py'
2023-04-03T10:39:25,939   adding 'kmergenetyper/kma.py'
2023-04-03T10:39:25,942   adding 'kmergenetyper/realignConsensus.py'
2023-04-03T10:39:25,945   adding 'kmergenetyper/typeGenes.py'
2023-04-03T10:39:25,947   adding 'kmergenetyper/version.py'
2023-04-03T10:39:25,952   adding 'kmergenetyper-1.0.1.data/scripts/kmergenetyper'
2023-04-03T10:39:25,959   adding 'kmergenetyper-1.0.1.dist-info/LICENSE'
2023-04-03T10:39:25,961   adding 'kmergenetyper-1.0.1.dist-info/METADATA'
2023-04-03T10:39:25,963   adding 'kmergenetyper-1.0.1.dist-info/WHEEL'
2023-04-03T10:39:25,965   adding 'kmergenetyper-1.0.1.dist-info/top_level.txt'
2023-04-03T10:39:25,966   adding 'kmergenetyper-1.0.1.dist-info/RECORD'
2023-04-03T10:39:25,969   removing build/bdist.linux-armv7l/wheel
2023-04-03T10:39:26,126   Building wheel for kmergenetyper (setup.py): finished with status 'done'
2023-04-03T10:39:26,133   Created wheel for kmergenetyper: filename=kmergenetyper-1.0.1-py3-none-any.whl size=8728 sha256=0ac6724b8b358e46144560e2fc69d753c7ebfa34243a55477bdb59221da645dd
2023-04-03T10:39:26,135   Stored in directory: /tmp/pip-ephem-wheel-cache-rjryrjes/wheels/00/a0/35/2e8823af846038052506dff2c54105b89755471c0f2227bdd5
2023-04-03T10:39:26,161 Successfully built kmergenetyper
2023-04-03T10:39:26,168 Removed build tracker: '/tmp/pip-build-tracker-3_wve6ve'