2023-04-03T12:27:51,612 Created temporary directory: /tmp/pip-ephem-wheel-cache-na7fzxvw 2023-04-03T12:27:51,618 Created temporary directory: /tmp/pip-build-tracker-y75fiqv5 2023-04-03T12:27:51,619 Initialized build tracking at /tmp/pip-build-tracker-y75fiqv5 2023-04-03T12:27:51,619 Created build tracker: /tmp/pip-build-tracker-y75fiqv5 2023-04-03T12:27:51,619 Entered build tracker: /tmp/pip-build-tracker-y75fiqv5 2023-04-03T12:27:51,621 Created temporary directory: /tmp/pip-wheel-29h80hoe 2023-04-03T12:27:51,630 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-03T12:27:51,637 Created temporary directory: /tmp/pip-ephem-wheel-cache-8m56_luq 2023-04-03T12:27:51,690 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-03T12:27:51,697 2 location(s) to search for versions of sequana: 2023-04-03T12:27:51,697 * https://pypi.org/simple/sequana/ 2023-04-03T12:27:51,697 * https://www.piwheels.org/simple/sequana/ 2023-04-03T12:27:51,698 Fetching project page and analyzing links: https://pypi.org/simple/sequana/ 2023-04-03T12:27:51,699 Getting page https://pypi.org/simple/sequana/ 2023-04-03T12:27:51,702 Found index url https://pypi.org/simple 2023-04-03T12:27:51,952 Fetched page https://pypi.org/simple/sequana/ as application/vnd.pypi.simple.v1+json 2023-04-03T12:27:51,992 Found link https://files.pythonhosted.org/packages/36/8c/248dad81c4c7774c280a03c432fb07aa977a5488ab25e4cf665e34de16db/sequana-0.0.2.tar.gz (from 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2023-04-03T12:27:52,356 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.3.0-py3-none-any.whl#sha256=784c45559b3813a77c854c88c7f87f069fc80854dab49c4ce554d9e8d955bfee (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,356 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.2.1-py3-none-any.whl#sha256=6c243101661c5b7e001970929b3f0854775ff25ec464016bac56bed727d1af42 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,357 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.2.0-py3-none-any.whl#sha256=3f93bab506968797bfa09bd546a7890f00035664062d87d06c5cc0cae18ae47d (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,357 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.21-py3-none-any.whl#sha256=39c81be55199636ec0613bef138ee06c6484b7fe1fe77cfecd372a3c757a1060 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,358 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.20-py3-none-any.whl#sha256=443bc96ad7fb6fd2e4f68246cd5e0d14513ec95d0b41dcad255eff04d5ec5448 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,358 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.19-py3-none-any.whl#sha256=072add6f657fd5ba0c484c282d0eae596f1b81bbbe5d73d01ee428afd896b26e (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,359 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.18-py3-none-any.whl#sha256=325c4e727752bdcd6411fc583c6c67f5c153ccefe6a6fa61a5bb136c4cacb24f (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,359 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.17.1-py3-none-any.whl#sha256=42ab5898af408588dff9d91d1e90f24ce831d1fc6c6298c2ab58efd248995a84 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,360 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.16-py3-none-any.whl#sha256=8f1f80eb30386474322cbc9cb6d8ccb98397b4ebefa290886f2631f3b3540d56 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,360 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.15-py3-none-any.whl#sha256=d285757bc8a46c7b331b3a27a79a559517e57b337e0d1381e8049e125f91b558 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,361 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.14-py3-none-any.whl#sha256=ced50d95b3a00f2f8103c06a1cb6bb4097d8d4a08c461bf26525f6afe8ff75e0 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,361 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.13-py3-none-any.whl#sha256=d79163ff3005e50c03bd3d241bd28c77fc27b149ca3cafcaac73dd11f3da756a (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,362 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.12-py3-none-any.whl#sha256=3f04e8007283308a1ca403222a81dfa0b39e862fc4b273b877ac7c0515aa1bed (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,362 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.11-py3-none-any.whl#sha256=0514b5d913fc13bc5bd0581143c312ce0e8962bd493655d11666cd1ffc4cae27 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,363 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.10-py3-none-any.whl#sha256=407656fa50b3fc2277e6d63fcd545fc4e9c13092a89a2a5cc782f84d008725b5 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,363 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.9-py3-none-any.whl#sha256=d388a5c84fd9f1adb5094860b47e54b8ec1fc5dd60da99b5b7a4bd92471e1e5b (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,364 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.8-py3-none-any.whl#sha256=25d68d94847d23aecd8d532f01ab95b7a8318fb5dc9ad5bbc87731b0968dc4ea (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,364 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.7-py3-none-any.whl#sha256=ccad69fd14b518346bb120b0790f15e4e949a563a0b1e560b9410a9d10d00f42 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,365 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.6-py3-none-any.whl#sha256=610326506e644e9df180931d8a20a48852a8196ba9c4d0e9aa6d1acb88d4e615 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,365 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.5-py3-none-any.whl#sha256=6fba4d02c27c802f9371c940699ef0ece1e24bffb7553bcb9720cc07ca2a66aa (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,366 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.4-py3-none-any.whl#sha256=8f3002523e9b7584a718eb2f1282a811eee489863f47e56aff0094be65fd04d0 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,366 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.2-py3-none-any.whl#sha256=489f87ea4af5d8111aaf0b2603e4dbc8d44a47ad6a14eb44b2157490ccc4513c (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,367 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.1-py3-none-any.whl#sha256=4e7dd7cad3fca35158004af8ee06e0ec911f098fb7fbace75e7ae3c35e91a917 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,367 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.0-py3-none-any.whl#sha256=979f04997f10759229e1cc7030a78f086ca36d54a9a68d48743734700cc907f6 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,368 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.0.3-py3-none-any.whl#sha256=2c7fbcfed3e6a09a9088f8373053f9256dda94deca725dd0f129f8a51130323c (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,368 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.0.2-py3-none-any.whl#sha256=8565432ebe4263c2fd81f958a88814fd932deef7d8e488854db16600a39fc4b9 (from https://www.piwheels.org/simple/sequana/) 2023-04-03T12:27:52,369 Skipping link: not a file: https://www.piwheels.org/simple/sequana/ 2023-04-03T12:27:52,370 Skipping link: not a file: https://pypi.org/simple/sequana/ 2023-04-03T12:27:52,433 Given no hashes to check 1 links for project 'sequana': discarding no candidates 2023-04-03T12:27:52,464 Collecting sequana==0.15.0 2023-04-03T12:27:52,468 Created temporary directory: /tmp/pip-unpack-ze7ukrxm 2023-04-03T12:27:53,003 Downloading sequana-0.15.0.tar.gz (4.1 MB) 2023-04-03T12:27:57,659 Added sequana==0.15.0 from https://files.pythonhosted.org/packages/4f/9f/8802f849199c88d3f52625b9792bbb38e91dc59d6586c6b784f2c8352019/sequana-0.15.0.tar.gz to build tracker '/tmp/pip-build-tracker-y75fiqv5' 2023-04-03T12:27:57,662 Running setup.py (path:/tmp/pip-wheel-29h80hoe/sequana_5823abf55ed14ad6ad06e8a41c274c2c/setup.py) egg_info for package sequana 2023-04-03T12:27:57,663 Created temporary directory: /tmp/pip-pip-egg-info-4m1ue5m3 2023-04-03T12:27:57,664 Preparing metadata (setup.py): started 2023-04-03T12:27:57,666 Running command python setup.py egg_info 2023-04-03T12:27:59,416 running egg_info 2023-04-03T12:27:59,419 creating /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info 2023-04-03T12:27:59,493 writing /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/PKG-INFO 2023-04-03T12:27:59,501 writing dependency_links to /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/dependency_links.txt 2023-04-03T12:27:59,507 writing entry points to /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/entry_points.txt 2023-04-03T12:27:59,511 writing requirements to /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/requires.txt 2023-04-03T12:27:59,513 writing top-level names to /tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/top_level.txt 2023-04-03T12:27:59,516 writing manifest file '/tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/SOURCES.txt' 2023-04-03T12:28:00,240 reading manifest file '/tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/SOURCES.txt' 2023-04-03T12:28:00,243 reading manifest template 'MANIFEST.in' 2023-04-03T12:28:00,250 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-04-03T12:28:00,254 warning: no previously-included files matching '*pyc' found under directory '*' 2023-04-03T12:28:00,731 warning: no files found matching 'test/requirements*txt' 2023-04-03T12:28:00,734 warning: no previously-included files matching '*' found under directory 'sequana/methylation' 2023-04-03T12:28:00,736 warning: no previously-included files matching '*' found under directory 'test' 2023-04-03T12:28:00,739 warning: no previously-included files matching '*' found under directory 'doc' 2023-04-03T12:28:00,742 warning: no previously-included files found matching 'sequana/rm2.py' 2023-04-03T12:28:00,742 adding license file 'LICENSE' 2023-04-03T12:28:00,781 writing manifest file '/tmp/pip-pip-egg-info-4m1ue5m3/sequana.egg-info/SOURCES.txt' 2023-04-03T12:28:00,902 Preparing metadata (setup.py): finished with status 'done' 2023-04-03T12:28:00,919 Source in /tmp/pip-wheel-29h80hoe/sequana_5823abf55ed14ad6ad06e8a41c274c2c has version 0.15.0, which satisfies requirement sequana==0.15.0 from https://files.pythonhosted.org/packages/4f/9f/8802f849199c88d3f52625b9792bbb38e91dc59d6586c6b784f2c8352019/sequana-0.15.0.tar.gz 2023-04-03T12:28:00,921 Removed sequana==0.15.0 from https://files.pythonhosted.org/packages/4f/9f/8802f849199c88d3f52625b9792bbb38e91dc59d6586c6b784f2c8352019/sequana-0.15.0.tar.gz from build tracker '/tmp/pip-build-tracker-y75fiqv5' 2023-04-03T12:28:00,935 Created temporary directory: /tmp/pip-unpack-ojmjdvts 2023-04-03T12:28:00,936 Building wheels for collected packages: sequana 2023-04-03T12:28:00,945 Created temporary directory: /tmp/pip-wheel-p5w5eham 2023-04-03T12:28:00,946 Building wheel for sequana (setup.py): started 2023-04-03T12:28:00,948 Destination directory: /tmp/pip-wheel-p5w5eham 2023-04-03T12:28:00,948 Running command python setup.py bdist_wheel 2023-04-03T12:28:03,193 running bdist_wheel 2023-04-03T12:28:03,926 running build 2023-04-03T12:28:03,927 running build_py 2023-04-03T12:28:04,006 creating build 2023-04-03T12:28:04,007 creating build/lib 2023-04-03T12:28:04,009 creating build/lib/sequana 2023-04-03T12:28:04,011 copying sequana/running_median.py -> build/lib/sequana 2023-04-03T12:28:04,016 copying sequana/sniffer.py -> build/lib/sequana 2023-04-03T12:28:04,020 copying sequana/bedtools.py -> build/lib/sequana 2023-04-03T12:28:04,028 copying sequana/iem.py -> build/lib/sequana 2023-04-03T12:28:04,032 copying sequana/vst.py -> build/lib/sequana 2023-04-03T12:28:04,036 copying sequana/stats.py -> build/lib/sequana 2023-04-03T12:28:04,040 copying sequana/vcf_filter.py -> build/lib/sequana 2023-04-03T12:28:04,045 copying sequana/kmer.py -> build/lib/sequana 2023-04-03T12:28:04,048 copying sequana/freebayes_bcf_filter.py -> build/lib/sequana 2023-04-03T12:28:04,053 copying sequana/demultiplex.py -> build/lib/sequana 2023-04-03T12:28:04,057 copying sequana/fastq.py -> build/lib/sequana 2023-04-03T12:28:04,063 copying sequana/featurecounts.py -> build/lib/sequana 2023-04-03T12:28:04,068 copying sequana/iuapc.py -> build/lib/sequana 2023-04-03T12:28:04,073 copying sequana/idr.py -> build/lib/sequana 2023-04-03T12:28:04,077 copying sequana/contigs.py -> build/lib/sequana 2023-04-03T12:28:04,082 copying sequana/macs3.py -> build/lib/sequana 2023-04-03T12:28:04,086 copying sequana/gff3.py -> build/lib/sequana 2023-04-03T12:28:04,091 copying sequana/vcftools.py -> build/lib/sequana 2023-04-03T12:28:04,096 copying sequana/errors.py -> build/lib/sequana 2023-04-03T12:28:04,100 copying sequana/freebayes_vcf_filter.py -> build/lib/sequana 2023-04-03T12:28:04,106 copying sequana/phantom.py -> build/lib/sequana 2023-04-03T12:28:04,111 copying sequana/assembly.py -> build/lib/sequana 2023-04-03T12:28:04,116 copying sequana/fastqc.py -> build/lib/sequana 2023-04-03T12:28:04,121 copying sequana/canu_scanner.py -> build/lib/sequana 2023-04-03T12:28:04,126 copying sequana/summary.py -> build/lib/sequana 2023-04-03T12:28:04,131 copying sequana/misc.py -> build/lib/sequana 2023-04-03T12:28:04,135 copying sequana/gtf_fixer.py -> build/lib/sequana 2023-04-03T12:28:04,139 copying sequana/cnv.py -> build/lib/sequana 2023-04-03T12:28:04,143 copying sequana/databases.py -> build/lib/sequana 2023-04-03T12:28:04,148 copying sequana/protein.py -> build/lib/sequana 2023-04-03T12:28:04,152 copying sequana/mgi.py -> build/lib/sequana 2023-04-03T12:28:04,155 copying sequana/sequence.py -> build/lib/sequana 2023-04-03T12:28:04,161 copying sequana/salmon.py -> build/lib/sequana 2023-04-03T12:28:04,166 copying sequana/rnadiff.py -> build/lib/sequana 2023-04-03T12:28:04,174 copying sequana/snpeff.py -> build/lib/sequana 2023-04-03T12:28:04,179 copying sequana/ribodesigner.py -> build/lib/sequana 2023-04-03T12:28:04,184 copying sequana/criteria.py -> build/lib/sequana 2023-04-03T12:28:04,189 copying sequana/itol.py -> build/lib/sequana 2023-04-03T12:28:04,194 copying sequana/tools.py -> build/lib/sequana 2023-04-03T12:28:04,198 copying sequana/trf.py -> build/lib/sequana 2023-04-03T12:28:04,203 copying sequana/kegg.py -> build/lib/sequana 2023-04-03T12:28:04,207 copying sequana/phred.py -> build/lib/sequana 2023-04-03T12:28:04,211 copying sequana/bed.py -> build/lib/sequana 2023-04-03T12:28:04,216 copying sequana/codon.py -> build/lib/sequana 2023-04-03T12:28:04,221 copying sequana/fasta_gff_correction.py -> build/lib/sequana 2023-04-03T12:28:04,227 copying sequana/compare.py -> build/lib/sequana 2023-04-03T12:28:04,232 copying sequana/homer.py -> build/lib/sequana 2023-04-03T12:28:04,236 copying sequana/lazyimports.py -> build/lib/sequana 2023-04-03T12:28:04,241 copying sequana/krona.py -> build/lib/sequana 2023-04-03T12:28:04,245 copying sequana/pacbio.py -> build/lib/sequana 2023-04-03T12:28:04,252 copying sequana/cigar.py -> build/lib/sequana 2023-04-03T12:28:04,257 copying sequana/cpg_islands.py -> build/lib/sequana 2023-04-03T12:28:04,262 copying sequana/lazy.py -> build/lib/sequana 2023-04-03T12:28:04,266 copying sequana/bamtools.py -> build/lib/sequana 2023-04-03T12:28:04,274 copying sequana/find_motif.py -> build/lib/sequana 2023-04-03T12:28:04,278 copying sequana/coverage.py -> build/lib/sequana 2023-04-03T12:28:04,283 copying sequana/taxonomy.py -> build/lib/sequana 2023-04-03T12:28:04,288 copying sequana/mh.py -> build/lib/sequana 2023-04-03T12:28:04,292 copying sequana/mixture.py -> build/lib/sequana 2023-04-03T12:28:04,297 copying sequana/pacbio_amplicon.py -> build/lib/sequana 2023-04-03T12:28:04,302 copying sequana/isoseq.py -> build/lib/sequana 2023-04-03T12:28:04,307 copying sequana/fasta.py -> build/lib/sequana 2023-04-03T12:28:04,312 copying sequana/genbank.py -> build/lib/sequana 2023-04-03T12:28:04,316 copying sequana/datatools.py -> build/lib/sequana 2023-04-03T12:28:04,319 copying sequana/__init__.py -> build/lib/sequana 2023-04-03T12:28:04,323 copying sequana/frip.py -> build/lib/sequana 2023-04-03T12:28:04,328 creating build/lib/sequana/rules 2023-04-03T12:28:04,329 copying sequana/rules/__init__.py -> build/lib/sequana/rules 2023-04-03T12:28:04,335 creating build/lib/sequana/enrichment 2023-04-03T12:28:04,337 copying sequana/enrichment/quickgo.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,341 copying sequana/enrichment/panther.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,346 copying sequana/enrichment/gsea.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,350 copying sequana/enrichment/mart.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,354 copying sequana/enrichment/ontology.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,358 copying sequana/enrichment/plot_go_terms.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,363 copying sequana/enrichment/kegg.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,368 copying sequana/enrichment/uniprot_enrichment.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,372 copying sequana/enrichment/__init__.py -> build/lib/sequana/enrichment 2023-04-03T12:28:04,377 creating build/lib/sequana/resources 2023-04-03T12:28:04,378 copying sequana/resources/__init__.py -> build/lib/sequana/resources 2023-04-03T12:28:04,383 creating build/lib/sequana/kraken 2023-04-03T12:28:04,385 copying sequana/kraken/analysis.py -> build/lib/sequana/kraken 2023-04-03T12:28:04,392 copying sequana/kraken/multikraken.py -> build/lib/sequana/kraken 2023-04-03T12:28:04,396 copying sequana/kraken/__init__.py -> build/lib/sequana/kraken 2023-04-03T12:28:04,403 creating build/lib/sequana/modules_report 2023-04-03T12:28:04,405 copying sequana/modules_report/bwa_bam_to_fastq.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,409 copying sequana/modules_report/bamqc.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,412 copying sequana/modules_report/base_module.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,417 copying sequana/modules_report/variant_calling.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,421 copying sequana/modules_report/fastqc.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,425 copying sequana/modules_report/summary.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,429 copying sequana/modules_report/panther_enrichment.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,434 copying sequana/modules_report/joint_calling.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,437 copying sequana/modules_report/rnadiff.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,442 copying sequana/modules_report/kraken.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,447 copying sequana/modules_report/pacbio_input_bam.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,451 copying sequana/modules_report/kegg_enrichment.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,455 copying sequana/modules_report/multi_summary.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,460 copying sequana/modules_report/trf.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,464 copying sequana/modules_report/phix.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,468 copying sequana/modules_report/fastq_stats.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,473 copying sequana/modules_report/quast.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,476 copying sequana/modules_report/coverage.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,482 copying sequana/modules_report/uniprot_enrichment.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,486 copying sequana/modules_report/cutadapt.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,491 copying sequana/modules_report/__init__.py -> build/lib/sequana/modules_report 2023-04-03T12:28:04,498 creating build/lib/sequana/viz 2023-04-03T12:28:04,499 copying sequana/viz/linkage.py -> build/lib/sequana/viz 2023-04-03T12:28:04,503 copying sequana/viz/heatmap.py -> build/lib/sequana/viz 2023-04-03T12:28:04,509 copying sequana/viz/mds.py -> build/lib/sequana/viz 2023-04-03T12:28:04,512 copying sequana/viz/volcano.py -> build/lib/sequana/viz 2023-04-03T12:28:04,517 copying sequana/viz/hinton.py -> build/lib/sequana/viz 2023-04-03T12:28:04,521 copying sequana/viz/hist2d.py -> build/lib/sequana/viz 2023-04-03T12:28:04,525 copying sequana/viz/dendogram.py -> build/lib/sequana/viz 2023-04-03T12:28:04,529 copying sequana/viz/pca.py -> build/lib/sequana/viz 2023-04-03T12:28:04,533 copying sequana/viz/venn.py -> build/lib/sequana/viz 2023-04-03T12:28:04,537 copying sequana/viz/anova.py -> build/lib/sequana/viz 2023-04-03T12:28:04,540 copying sequana/viz/isomap.py -> build/lib/sequana/viz 2023-04-03T12:28:04,544 copying sequana/viz/corrplot.py -> build/lib/sequana/viz 2023-04-03T12:28:04,550 copying sequana/viz/imshow.py -> build/lib/sequana/viz 2023-04-03T12:28:04,553 copying sequana/viz/scatter.py -> build/lib/sequana/viz 2023-04-03T12:28:04,558 copying sequana/viz/boxplot.py -> build/lib/sequana/viz 2023-04-03T12:28:04,562 copying sequana/viz/clusterisation.py -> build/lib/sequana/viz 2023-04-03T12:28:04,566 copying sequana/viz/core.py -> build/lib/sequana/viz 2023-04-03T12:28:04,570 copying sequana/viz/__init__.py -> build/lib/sequana/viz 2023-04-03T12:28:04,575 creating build/lib/sequana/utils 2023-04-03T12:28:04,577 copying sequana/utils/tree.py -> build/lib/sequana/utils 2023-04-03T12:28:04,582 copying sequana/utils/datatables_js.py -> build/lib/sequana/utils 2023-04-03T12:28:04,587 copying sequana/utils/df2html.py -> build/lib/sequana/utils 2023-04-03T12:28:04,590 copying sequana/utils/config.py -> build/lib/sequana/utils 2023-04-03T12:28:04,594 copying sequana/utils/pandas.py -> build/lib/sequana/utils 2023-04-03T12:28:04,598 copying sequana/utils/singleton.py -> build/lib/sequana/utils 2023-04-03T12:28:04,601 copying sequana/utils/__init__.py -> build/lib/sequana/utils 2023-04-03T12:28:04,606 creating build/lib/sequana/multiqc 2023-04-03T12:28:04,608 copying sequana/multiqc/laa.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,612 copying sequana/multiqc/quality_control.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,617 copying sequana/multiqc/config.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,621 copying sequana/multiqc/pacbio_qc.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,625 copying sequana/multiqc/isoseq_qc.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,629 copying sequana/multiqc/bamtools_stats.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,634 copying sequana/multiqc/kraken.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,638 copying sequana/multiqc/plots.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,642 copying sequana/multiqc/coverage.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,646 copying sequana/multiqc/pacbio_amplicon.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,650 copying sequana/multiqc/isoseq.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,654 copying sequana/multiqc/__init__.py -> build/lib/sequana/multiqc 2023-04-03T12:28:04,659 creating build/lib/sequana/scripts 2023-04-03T12:28:04,661 copying sequana/scripts/common.py -> build/lib/sequana/scripts 2023-04-03T12:28:04,665 copying sequana/scripts/substractor.py -> build/lib/sequana/scripts 2023-04-03T12:28:04,670 copying sequana/scripts/coverage.py -> build/lib/sequana/scripts 2023-04-03T12:28:04,675 copying sequana/scripts/taxonomy.py -> build/lib/sequana/scripts 2023-04-03T12:28:04,679 copying sequana/scripts/__init__.py -> build/lib/sequana/scripts 2023-04-03T12:28:04,684 creating build/lib/sequana/plots 2023-04-03T12:28:04,686 copying sequana/plots/canvasjs_linegraph.py -> build/lib/sequana/plots 2023-04-03T12:28:04,690 copying sequana/plots/canvasjs_base.py -> build/lib/sequana/plots 2023-04-03T12:28:04,694 copying sequana/plots/__init__.py -> build/lib/sequana/plots 2023-04-03T12:28:04,698 creating build/lib/sequana/rules/Pacbio 2023-04-03T12:28:04,700 copying sequana/rules/Pacbio/__init__.py -> build/lib/sequana/rules/Pacbio 2023-04-03T12:28:04,705 creating build/lib/sequana/rules/deeptools 2023-04-03T12:28:04,706 copying sequana/rules/deeptools/__init__.py -> build/lib/sequana/rules/deeptools 2023-04-03T12:28:04,711 creating build/lib/sequana/rules/picard-tools 2023-04-03T12:28:04,713 copying sequana/rules/picard-tools/__init__.py -> build/lib/sequana/rules/picard-tools 2023-04-03T12:28:04,717 creating build/lib/sequana/rules/SnpEff 2023-04-03T12:28:04,719 copying sequana/rules/SnpEff/__init__.py -> build/lib/sequana/rules/SnpEff 2023-04-03T12:28:04,723 creating build/lib/sequana/rules/idr 2023-04-03T12:28:04,725 copying sequana/rules/idr/__init__.py -> build/lib/sequana/rules/idr 2023-04-03T12:28:04,729 creating build/lib/sequana/rules/sambamba 2023-04-03T12:28:04,731 copying sequana/rules/sambamba/__init__.py -> build/lib/sequana/rules/sambamba 2023-04-03T12:28:04,735 creating build/lib/sequana/rules/codecs 2023-04-03T12:28:04,737 copying sequana/rules/codecs/__init__.py -> build/lib/sequana/rules/codecs 2023-04-03T12:28:04,742 creating build/lib/sequana/resources/testing 2023-04-03T12:28:04,743 copying sequana/resources/testing/__init__.py -> build/lib/sequana/resources/testing 2023-04-03T12:28:04,748 creating build/lib/sequana/resources/css 2023-04-03T12:28:04,749 copying sequana/resources/css/__init__.py -> build/lib/sequana/resources/css 2023-04-03T12:28:04,754 creating build/lib/sequana/resources/templates 2023-04-03T12:28:04,755 copying sequana/resources/templates/__init__.py -> build/lib/sequana/resources/templates 2023-04-03T12:28:04,760 creating build/lib/sequana/resources/images 2023-04-03T12:28:04,761 copying sequana/resources/images/__init__.py -> build/lib/sequana/resources/images 2023-04-03T12:28:04,766 creating build/lib/sequana/resources/canvas 2023-04-03T12:28:04,768 copying sequana/resources/canvas/bar.py -> build/lib/sequana/resources/canvas 2023-04-03T12:28:04,772 copying sequana/resources/canvas/__init__.py -> build/lib/sequana/resources/canvas 2023-04-03T12:28:04,776 creating build/lib/sequana/resources/doc 2023-04-03T12:28:04,778 copying sequana/resources/doc/__init__.py -> build/lib/sequana/resources/doc 2023-04-03T12:28:04,782 creating build/lib/sequana/resources/snpeff 2023-04-03T12:28:04,784 copying sequana/resources/snpeff/__init__.py -> build/lib/sequana/resources/snpeff 2023-04-03T12:28:04,788 creating build/lib/sequana/resources/js 2023-04-03T12:28:04,790 copying sequana/resources/js/__init__.py -> build/lib/sequana/resources/js 2023-04-03T12:28:04,795 creating build/lib/sequana/resources/examples 2023-04-03T12:28:04,796 copying sequana/resources/examples/__init__.py -> build/lib/sequana/resources/examples 2023-04-03T12:28:04,801 creating build/lib/sequana/resources/data 2023-04-03T12:28:04,802 copying sequana/resources/data/__init__.py -> build/lib/sequana/resources/data 2023-04-03T12:28:04,808 creating build/lib/sequana/resources/doc/rnadiff_compare 2023-04-03T12:28:04,809 copying sequana/resources/doc/rnadiff_compare/__init__.py -> build/lib/sequana/resources/doc/rnadiff_compare 2023-04-03T12:28:04,814 creating build/lib/sequana/resources/doc/rnaseq_0 2023-04-03T12:28:04,815 copying sequana/resources/doc/rnaseq_0/__init__.py -> build/lib/sequana/resources/doc/rnaseq_0 2023-04-03T12:28:04,820 creating build/lib/sequana/resources/doc/rnaseq_0/sample1 2023-04-03T12:28:04,822 copying sequana/resources/doc/rnaseq_0/sample1/__init__.py -> build/lib/sequana/resources/doc/rnaseq_0/sample1 2023-04-03T12:28:04,826 creating build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_1 2023-04-03T12:28:04,828 copying sequana/resources/doc/rnaseq_0/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_1 2023-04-03T12:28:04,833 creating build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_2 2023-04-03T12:28:04,834 copying sequana/resources/doc/rnaseq_0/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_2 2023-04-03T12:28:04,839 creating build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_0 2023-04-03T12:28:04,841 copying sequana/resources/doc/rnaseq_0/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_0 2023-04-03T12:28:04,848 creating build/lib/sequana/scripts/main 2023-04-03T12:28:04,850 copying sequana/scripts/main/enrichment_panther.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,854 copying sequana/scripts/main/feature_count.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,858 copying sequana/scripts/main/fastq.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,862 copying sequana/scripts/main/gff_to_gtf.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,866 copying sequana/scripts/main/gff_to_light_gff.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,869 copying sequana/scripts/main/utils.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,873 copying sequana/scripts/main/lane_merging.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,877 copying sequana/scripts/main/summary.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,881 copying sequana/scripts/main/mapping.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,885 copying sequana/scripts/main/enrichment_uniprot.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,889 copying sequana/scripts/main/enrichment_kegg.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,894 copying sequana/scripts/main/gtf_fixer.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,898 copying sequana/scripts/main/variants_comparison.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,902 copying sequana/scripts/main/salmon.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,906 copying sequana/scripts/main/rnadiff.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,912 copying sequana/scripts/main/samplesheet.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,916 copying sequana/scripts/main/ribodesigner.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,920 copying sequana/scripts/main/biomart.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,925 copying sequana/scripts/main/main.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,929 copying sequana/scripts/main/taxonomy.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,933 copying sequana/scripts/main/fasta.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,937 copying sequana/scripts/main/rnaseq_compare.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:04,940 copying sequana/scripts/main/__init__.py -> build/lib/sequana/scripts/main 2023-04-03T12:28:05,364 copying sequana/rules/README.rst -> build/lib/sequana/rules 2023-04-03T12:28:05,368 creating build/lib/sequana/rules/fastq_screen_report 2023-04-03T12:28:05,371 copying sequana/rules/fastq_screen_report/fastq_screen_report.rules -> build/lib/sequana/rules/fastq_screen_report 2023-04-03T12:28:05,376 creating build/lib/sequana/rules/format_contigs 2023-04-03T12:28:05,379 copying sequana/rules/format_contigs/format_contigs.rules -> build/lib/sequana/rules/format_contigs 2023-04-03T12:28:05,384 creating build/lib/sequana/rules/rulegraph 2023-04-03T12:28:05,385 copying sequana/rules/rulegraph/rulegraph.rules -> build/lib/sequana/rules/rulegraph 2023-04-03T12:28:05,389 creating build/lib/sequana/rules/freebayes_bcf_filter 2023-04-03T12:28:05,391 copying sequana/rules/freebayes_bcf_filter/freebayes_bcf_filter.rules -> build/lib/sequana/rules/freebayes_bcf_filter 2023-04-03T12:28:05,395 creating build/lib/sequana/rules/spades_get_fastq 2023-04-03T12:28:05,397 copying sequana/rules/spades_get_fastq/spades_get_fastq.rules -> build/lib/sequana/rules/spades_get_fastq 2023-04-03T12:28:05,401 creating build/lib/sequana/rules/pacbio_quality 2023-04-03T12:28:05,403 copying sequana/rules/pacbio_quality/pacbio_quality.rules -> build/lib/sequana/rules/pacbio_quality 2023-04-03T12:28:05,407 creating build/lib/sequana/rules/salmon_mapping 2023-04-03T12:28:05,408 copying sequana/rules/salmon_mapping/salmon_mapping.rules -> build/lib/sequana/rules/salmon_mapping 2023-04-03T12:28:05,412 creating build/lib/sequana/rules/prokka 2023-04-03T12:28:05,414 copying sequana/rules/prokka/prokka.rules -> build/lib/sequana/rules/prokka 2023-04-03T12:28:05,419 creating build/lib/sequana/rules/DupRadar 2023-04-03T12:28:05,422 copying sequana/rules/DupRadar/DupRadar.rules -> build/lib/sequana/rules/DupRadar 2023-04-03T12:28:05,427 creating build/lib/sequana/rules/fastq_screen 2023-04-03T12:28:05,429 copying sequana/rules/fastq_screen/fastq_screen.rules -> build/lib/sequana/rules/fastq_screen 2023-04-03T12:28:05,433 creating build/lib/sequana/rules/indel_realigner 2023-04-03T12:28:05,435 copying sequana/rules/indel_realigner/indel_realigner.rules -> build/lib/sequana/rules/indel_realigner 2023-04-03T12:28:05,439 creating build/lib/sequana/rules/copy_multiple_files 2023-04-03T12:28:05,441 copying sequana/rules/copy_multiple_files/copy_multiple_files.rules -> build/lib/sequana/rules/copy_multiple_files 2023-04-03T12:28:05,445 creating build/lib/sequana/rules/fastq_sampling 2023-04-03T12:28:05,447 copying sequana/rules/fastq_sampling/fastq_sampling.rules -> build/lib/sequana/rules/fastq_sampling 2023-04-03T12:28:05,451 creating build/lib/sequana/rules/samtools_depth 2023-04-03T12:28:05,453 copying sequana/rules/samtools_depth/samtools_depth.rules -> build/lib/sequana/rules/samtools_depth 2023-04-03T12:28:05,457 creating build/lib/sequana/rules/freebayes 2023-04-03T12:28:05,459 copying sequana/rules/freebayes/freebayes.rules -> build/lib/sequana/rules/freebayes 2023-04-03T12:28:05,464 creating build/lib/sequana/rules/samtools_sort 2023-04-03T12:28:05,466 copying sequana/rules/samtools_sort/samtools_sort.rules -> build/lib/sequana/rules/samtools_sort 2023-04-03T12:28:05,472 creating build/lib/sequana/rules/extract_fasta_from_bed 2023-04-03T12:28:05,474 copying sequana/rules/extract_fasta_from_bed/extract_fasta_from_bed.rules -> build/lib/sequana/rules/extract_fasta_from_bed 2023-04-03T12:28:05,478 creating build/lib/sequana/rules/fastqc 2023-04-03T12:28:05,480 copying sequana/rules/fastqc/fastqc.rules -> build/lib/sequana/rules/fastqc 2023-04-03T12:28:05,484 creating build/lib/sequana/rules/salmon_index 2023-04-03T12:28:05,485 copying sequana/rules/salmon_index/salmon_index.rules -> build/lib/sequana/rules/salmon_index 2023-04-03T12:28:05,489 creating build/lib/sequana/rules/bamCoverage 2023-04-03T12:28:05,491 copying sequana/rules/bamCoverage/bamCoverage.rules -> build/lib/sequana/rules/bamCoverage 2023-04-03T12:28:05,495 creating build/lib/sequana/rules/bed_to_gff 2023-04-03T12:28:05,497 copying sequana/rules/bed_to_gff/bed_to_gff.rules -> build/lib/sequana/rules/bed_to_gff 2023-04-03T12:28:05,501 creating build/lib/sequana/rules/bwa_bam_to_fastq 2023-04-03T12:28:05,502 copying sequana/rules/bwa_bam_to_fastq/bwa_bam_to_fastq.rules -> build/lib/sequana/rules/bwa_bam_to_fastq 2023-04-03T12:28:05,507 creating build/lib/sequana/rules/spikes_counting 2023-04-03T12:28:05,508 copying sequana/rules/spikes_counting/spikes_counting.rules -> build/lib/sequana/rules/spikes_counting 2023-04-03T12:28:05,513 creating build/lib/sequana/rules/bam_quality_filter 2023-04-03T12:28:05,514 copying sequana/rules/bam_quality_filter/bam_quality_filter.rules -> build/lib/sequana/rules/bam_quality_filter 2023-04-03T12:28:05,518 creating build/lib/sequana/rules/fastp 2023-04-03T12:28:05,520 copying sequana/rules/fastp/fastp.rules -> build/lib/sequana/rules/fastp 2023-04-03T12:28:05,524 creating build/lib/sequana/rules/multiqc2 2023-04-03T12:28:05,526 copying sequana/rules/multiqc2/multiqc2.rules -> build/lib/sequana/rules/multiqc2 2023-04-03T12:28:05,530 creating build/lib/sequana/rules/revcomp_rule 2023-04-03T12:28:05,531 copying sequana/rules/revcomp_rule/revcomp_rule.rules -> build/lib/sequana/rules/revcomp_rule 2023-04-03T12:28:05,536 creating build/lib/sequana/rules/joint_freebayes_vcf_filter 2023-04-03T12:28:05,537 copying sequana/rules/joint_freebayes_vcf_filter/joint_freebayes_vcf_filter.rules -> build/lib/sequana/rules/joint_freebayes_vcf_filter 2023-04-03T12:28:05,541 creating build/lib/sequana/rules/rnaseqc 2023-04-03T12:28:05,543 copying sequana/rules/rnaseqc/rnaseqc.rules -> build/lib/sequana/rules/rnaseqc 2023-04-03T12:28:05,547 creating build/lib/sequana/rules/SARTools 2023-04-03T12:28:05,548 copying sequana/rules/SARTools/SARTools.rules -> build/lib/sequana/rules/SARTools 2023-04-03T12:28:05,553 creating build/lib/sequana/rules/cutadapt 2023-04-03T12:28:05,555 copying sequana/rules/cutadapt/cutadapt.rules -> build/lib/sequana/rules/cutadapt 2023-04-03T12:28:05,559 creating build/lib/sequana/rules/multiqc 2023-04-03T12:28:05,561 copying sequana/rules/multiqc/multiqc.rules -> build/lib/sequana/rules/multiqc 2023-04-03T12:28:05,565 creating build/lib/sequana/rules/igvtools 2023-04-03T12:28:05,567 copying sequana/rules/igvtools/igvtools.rules -> build/lib/sequana/rules/igvtools 2023-04-03T12:28:05,571 creating build/lib/sequana/rules/dag 2023-04-03T12:28:05,572 copying sequana/rules/dag/dag.rules -> build/lib/sequana/rules/dag 2023-04-03T12:28:05,576 creating build/lib/sequana/rules/summary_pipeline 2023-04-03T12:28:05,578 copying sequana/rules/summary_pipeline/summary_pipeline.rules -> build/lib/sequana/rules/summary_pipeline 2023-04-03T12:28:05,582 creating build/lib/sequana/rules/freebayes_vcf_filter 2023-04-03T12:28:05,584 copying sequana/rules/freebayes_vcf_filter/freebayes_vcf_filter.rules -> build/lib/sequana/rules/freebayes_vcf_filter 2023-04-03T12:28:05,588 creating build/lib/sequana/rules/miRNA_count_dynamic 2023-04-03T12:28:05,590 copying sequana/rules/miRNA_count_dynamic/miRNA_count_dynamic.rules -> build/lib/sequana/rules/miRNA_count_dynamic 2023-04-03T12:28:05,594 creating build/lib/sequana/rules/deeptools/BamPEFragmentSize 2023-04-03T12:28:05,595 copying sequana/rules/deeptools/BamPEFragmentSize/BamPEFragmentSize.rules -> build/lib/sequana/rules/deeptools/BamPEFragmentSize 2023-04-03T12:28:05,600 creating build/lib/sequana/rules/deeptools/plotCorrelation 2023-04-03T12:28:05,602 copying sequana/rules/deeptools/plotCorrelation/plotCorrelation.rules -> build/lib/sequana/rules/deeptools/plotCorrelation 2023-04-03T12:28:05,606 creating build/lib/sequana/rules/deeptools/plotCoverage 2023-04-03T12:28:05,608 copying sequana/rules/deeptools/plotCoverage/plotCoverage.rules -> build/lib/sequana/rules/deeptools/plotCoverage 2023-04-03T12:28:05,612 creating build/lib/sequana/rules/deeptools/multiBamSummary 2023-04-03T12:28:05,613 copying sequana/rules/deeptools/multiBamSummary/multiBamSummary.rules -> build/lib/sequana/rules/deeptools/multiBamSummary 2023-04-03T12:28:05,617 creating build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics 2023-04-03T12:28:05,619 copying sequana/rules/picard-tools/CollectInsertSizeMetrics/CollectInsertSizeMetrics.rules -> build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics 2023-04-03T12:28:05,623 creating build/lib/sequana/rules/picard-tools/reorderSam 2023-04-03T12:28:05,625 copying sequana/rules/picard-tools/reorderSam/reorderSam.rules -> build/lib/sequana/rules/picard-tools/reorderSam 2023-04-03T12:28:05,629 creating build/lib/sequana/rules/picard-tools/mark_duplicates 2023-04-03T12:28:05,631 copying sequana/rules/picard-tools/mark_duplicates/mark_duplicates.rules -> build/lib/sequana/rules/picard-tools/mark_duplicates 2023-04-03T12:28:05,635 creating build/lib/sequana/rules/picard-tools/create_sequence_dictionary 2023-04-03T12:28:05,637 copying sequana/rules/picard-tools/create_sequence_dictionary/create_sequence_dictionary.rules -> build/lib/sequana/rules/picard-tools/create_sequence_dictionary 2023-04-03T12:28:05,641 creating build/lib/sequana/rules/picard-tools/add_read_group 2023-04-03T12:28:05,643 copying sequana/rules/picard-tools/add_read_group/add_read_group.rules -> build/lib/sequana/rules/picard-tools/add_read_group 2023-04-03T12:28:05,647 creating build/lib/sequana/rules/SnpEff/snpeff_create_database 2023-04-03T12:28:05,648 copying sequana/rules/SnpEff/snpeff_create_database/snpeff_create_database.rules -> build/lib/sequana/rules/SnpEff/snpeff_create_database 2023-04-03T12:28:05,653 creating build/lib/sequana/rules/idr/metrics_peaks 2023-04-03T12:28:05,654 copying sequana/rules/idr/metrics_peaks/metrics_peaks.rules -> build/lib/sequana/rules/idr/metrics_peaks 2023-04-03T12:28:05,658 creating build/lib/sequana/rules/idr/stats_peakCalling 2023-04-03T12:28:05,660 copying sequana/rules/idr/stats_peakCalling/stats_peakCalling.rules -> build/lib/sequana/rules/idr/stats_peakCalling 2023-04-03T12:28:05,664 creating build/lib/sequana/rules/idr/compute_idr 2023-04-03T12:28:05,666 copying sequana/rules/idr/compute_idr/compute_idr.rules -> build/lib/sequana/rules/idr/compute_idr 2023-04-03T12:28:05,670 creating build/lib/sequana/rules/idr/intersectionApproach 2023-04-03T12:28:05,672 copying sequana/rules/idr/intersectionApproach/intersectionApproach.rules -> build/lib/sequana/rules/idr/intersectionApproach 2023-04-03T12:28:05,676 creating build/lib/sequana/rules/idr/union_peaks 2023-04-03T12:28:05,678 copying sequana/rules/idr/union_peaks/union_peaks.rules -> build/lib/sequana/rules/idr/union_peaks 2023-04-03T12:28:05,682 creating build/lib/sequana/rules/idr/preIDR_dynamic 2023-04-03T12:28:05,683 copying sequana/rules/idr/preIDR_dynamic/preIDR_dynamic.rules -> build/lib/sequana/rules/idr/preIDR_dynamic 2023-04-03T12:28:05,688 creating build/lib/sequana/rules/idr/select_peaks 2023-04-03T12:28:05,690 copying sequana/rules/idr/select_peaks/select_peaks.rules -> build/lib/sequana/rules/idr/select_peaks 2023-04-03T12:28:05,694 creating build/lib/sequana/rules/kraken 2023-04-03T12:28:05,695 creating build/lib/sequana/rules/kraken/1.1 2023-04-03T12:28:05,697 copying sequana/rules/kraken/1.1/kraken.rules -> build/lib/sequana/rules/kraken/1.1 2023-04-03T12:28:05,702 creating build/lib/sequana/rules/kraken/2.0 2023-04-03T12:28:05,704 copying sequana/rules/kraken/2.0/kraken.rules -> build/lib/sequana/rules/kraken/2.0 2023-04-03T12:28:05,708 creating build/lib/sequana/rules/kraken/1.0 2023-04-03T12:28:05,710 copying sequana/rules/kraken/1.0/kraken.rules -> build/lib/sequana/rules/kraken/1.0 2023-04-03T12:28:05,714 creating build/lib/sequana/rules/sambamba/sambamba_markdup 2023-04-03T12:28:05,715 copying sequana/rules/sambamba/sambamba_markdup/sambamba_markdup.rules -> build/lib/sequana/rules/sambamba/sambamba_markdup 2023-04-03T12:28:05,719 creating build/lib/sequana/rules/sambamba/sambamba_filter 2023-04-03T12:28:05,721 copying sequana/rules/sambamba/sambamba_filter/sambamba_filter.rules -> build/lib/sequana/rules/sambamba/sambamba_filter 2023-04-03T12:28:05,725 creating build/lib/sequana/rules/codecs/vcf_to_bcf 2023-04-03T12:28:05,727 copying sequana/rules/codecs/vcf_to_bcf/vcf_to_bcf.rules -> build/lib/sequana/rules/codecs/vcf_to_bcf 2023-04-03T12:28:05,731 creating build/lib/sequana/rules/codecs/bz2_to_dsrc 2023-04-03T12:28:05,733 copying sequana/rules/codecs/bz2_to_dsrc/bz2_to_dsrc.rules -> build/lib/sequana/rules/codecs/bz2_to_dsrc 2023-04-03T12:28:05,737 creating build/lib/sequana/rules/codecs/dsrc_to_bz2 2023-04-03T12:28:05,738 copying sequana/rules/codecs/dsrc_to_bz2/dsrc_to_bz2.rules -> build/lib/sequana/rules/codecs/dsrc_to_bz2 2023-04-03T12:28:05,742 creating build/lib/sequana/rules/codecs/gz_to_dsrc 2023-04-03T12:28:05,744 copying sequana/rules/codecs/gz_to_dsrc/gz_to_dsrc.rules -> build/lib/sequana/rules/codecs/gz_to_dsrc 2023-04-03T12:28:05,748 creating build/lib/sequana/rules/codecs/gz_to_fastq 2023-04-03T12:28:05,750 copying sequana/rules/codecs/gz_to_fastq/gz_to_fastq.rules -> build/lib/sequana/rules/codecs/gz_to_fastq 2023-04-03T12:28:05,754 creating build/lib/sequana/rules/codecs/fastq_to_bz2 2023-04-03T12:28:05,755 copying sequana/rules/codecs/fastq_to_bz2/fastq_to_bz2.rules -> build/lib/sequana/rules/codecs/fastq_to_bz2 2023-04-03T12:28:05,760 creating build/lib/sequana/rules/codecs/dsrc_to_fastq 2023-04-03T12:28:05,764 copying sequana/rules/codecs/dsrc_to_fastq/dsrc_to_fastq.rules -> build/lib/sequana/rules/codecs/dsrc_to_fastq 2023-04-03T12:28:05,768 creating build/lib/sequana/rules/codecs/fastq_to_dsrc 2023-04-03T12:28:05,770 copying sequana/rules/codecs/fastq_to_dsrc/fastq_to_dsrc.rules -> build/lib/sequana/rules/codecs/fastq_to_dsrc 2023-04-03T12:28:05,774 creating build/lib/sequana/rules/codecs/bz2_to_fastq 2023-04-03T12:28:05,776 copying sequana/rules/codecs/bz2_to_fastq/bz2_to_fastq.rules -> build/lib/sequana/rules/codecs/bz2_to_fastq 2023-04-03T12:28:05,780 creating build/lib/sequana/rules/codecs/fastq_to_gz 2023-04-03T12:28:05,782 copying sequana/rules/codecs/fastq_to_gz/fastq_to_gz.rules -> build/lib/sequana/rules/codecs/fastq_to_gz 2023-04-03T12:28:05,786 creating build/lib/sequana/rules/multiqc/2.0 2023-04-03T12:28:05,788 copying sequana/rules/multiqc/2.0/multiqc.rules -> build/lib/sequana/rules/multiqc/2.0 2023-04-03T12:28:05,792 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta 2023-04-03T12:28:05,793 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2023-04-03T12:28:05,795 copying sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1/snpeff_add_locus_in_fasta.rules -> build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2023-04-03T12:28:05,799 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2023-04-03T12:28:05,801 copying sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0/snpeff_add_locus_in_fasta.rules -> build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2023-04-03T12:28:05,805 creating build/lib/sequana/rules/SnpEff/snpeff 2023-04-03T12:28:05,806 creating build/lib/sequana/rules/SnpEff/snpeff/1.1 2023-04-03T12:28:05,808 copying sequana/rules/SnpEff/snpeff/1.1/snpeff.rules -> build/lib/sequana/rules/SnpEff/snpeff/1.1 2023-04-03T12:28:05,812 creating build/lib/sequana/rules/SnpEff/snpeff/1.0 2023-04-03T12:28:05,814 copying sequana/rules/SnpEff/snpeff/1.0/snpeff.rules -> build/lib/sequana/rules/SnpEff/snpeff/1.0 2023-04-03T12:28:05,818 copying sequana/multiqc/multiqc_config.yaml -> build/lib/sequana/multiqc 2023-04-03T12:28:05,823 copying sequana/resources/testing/README.rst -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,827 copying sequana/resources/testing/adapters_with_duplicates.fa -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,831 copying sequana/resources/testing/test_expdesign_miseq_illumina.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,835 copying sequana/resources/testing/test_snpeff_ref.gb -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,872 copying sequana/resources/testing/test_index_mapper.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,876 copying sequana/resources/testing/test_coverage.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,897 copying sequana/resources/testing/test_taxon_rtd.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,902 copying sequana/resources/testing/test.fasta -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,908 copying sequana/resources/testing/test_expdesign_hiseq_duplicated_index.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,913 copying sequana/resources/testing/test_expdesign_rubicon.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,917 copying sequana/resources/testing/test_samplesheet_wrong_characters.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,922 copying sequana/resources/testing/test_blast_ebi.xml -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,944 copying sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv.fixed -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,949 copying sequana/resources/testing/test_blast_local.xml -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,954 copying sequana/resources/testing/test_expdesign_generic.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,959 copying sequana/resources/testing/test_kraken.out.summary -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,963 copying sequana/resources/testing/test_expdesign_Hm2.csv -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,968 copying sequana/resources/testing/test_dag.ann.dot -> build/lib/sequana/resources/testing 2023-04-03T12:28:05,973 copying sequana/resources/css/report.css -> build/lib/sequana/resources/css 2023-04-03T12:28:05,978 copying sequana/resources/css/jquery.dataTables.min.css -> build/lib/sequana/resources/css 2023-04-03T12:28:05,985 copying sequana/resources/css/jquery.dropdown.min.css -> build/lib/sequana/resources/css 2023-04-03T12:28:05,989 copying sequana/resources/css/buttons.dataTables.min.css -> build/lib/sequana/resources/css 2023-04-03T12:28:05,994 copying sequana/resources/css/bootstrap.min.css -> build/lib/sequana/resources/css 2023-04-03T12:28:06,006 copying sequana/resources/templates/vcf_diff.html -> build/lib/sequana/resources/templates 2023-04-03T12:28:06,011 copying sequana/resources/templates/joint_calling.html -> build/lib/sequana/resources/templates 2023-04-03T12:28:06,015 copying sequana/resources/templates/base.html -> build/lib/sequana/resources/templates 2023-04-03T12:28:06,019 copying sequana/resources/templates/standard.html -> build/lib/sequana/resources/templates 2023-04-03T12:28:06,023 copying sequana/resources/templates/rnadiff_light_template.R -> build/lib/sequana/resources/templates 2023-04-03T12:28:06,027 copying sequana/resources/images/no_data.jpg -> build/lib/sequana/resources/images 2023-04-03T12:28:06,031 copying sequana/resources/images/no_data.png -> build/lib/sequana/resources/images 2023-04-03T12:28:06,036 copying sequana/resources/images/logo_256x256.png -> build/lib/sequana/resources/images 2023-04-03T12:28:06,046 copying sequana/resources/images/Institut_Pasteur.png -> build/lib/sequana/resources/images 2023-04-03T12:28:06,054 copying sequana/resources/snpeff/snpEff.config -> build/lib/sequana/resources/snpeff 2023-04-03T12:28:06,059 copying sequana/resources/js/jquery.dataTables.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,070 copying sequana/resources/js/buttons.print.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,074 copying sequana/resources/js/jquery-3.5.1.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,085 copying sequana/resources/js/jquery.tocPlugin.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,089 copying sequana/resources/js/jquery-3.1.1.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,099 copying sequana/resources/js/papaparse.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,104 copying sequana/resources/js/jquery.dropdown.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,108 copying sequana/resources/js/bootstrap.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,116 copying sequana/resources/js/jquery-3.2.1.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,126 copying sequana/resources/js/jquery-2.1.1.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,147 copying sequana/resources/js/canvasjs.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,163 copying sequana/resources/js/buttons.html5.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,169 copying sequana/resources/js/dataTables.buttons.min.js -> build/lib/sequana/resources/js 2023-04-03T12:28:06,174 copying sequana/resources/examples/README.rst -> build/lib/sequana/resources/examples 2023-04-03T12:28:06,178 copying sequana/resources/examples/test.fastq.gz -> build/lib/sequana/resources/examples 2023-04-03T12:28:06,184 copying sequana/resources/examples/test_kraken.out -> build/lib/sequana/resources/examples 2023-04-03T12:28:06,188 copying sequana/resources/data/README.rst -> build/lib/sequana/resources/data 2023-04-03T12:28:06,192 copying sequana/resources/data/measles.fa -> build/lib/sequana/resources/data 2023-04-03T12:28:06,197 copying sequana/resources/data/phiX174.fa -> build/lib/sequana/resources/data 2023-04-03T12:28:06,201 copying sequana/resources/data/measles.fa.amb -> build/lib/sequana/resources/data 2023-04-03T12:28:06,205 copying sequana/resources/data/measles.fa.ann -> build/lib/sequana/resources/data 2023-04-03T12:28:06,209 copying sequana/resources/data/Hm2_GTGAAA_L005_R1_001.fastq.gz -> build/lib/sequana/resources/data 2023-04-03T12:28:06,219 copying sequana/resources/data/Hm2_GTGAAA_L005_R2_001.fastq.gz -> build/lib/sequana/resources/data 2023-04-03T12:28:06,230 copying sequana/resources/data/measles.fa.pac -> build/lib/sequana/resources/data 2023-04-03T12:28:06,234 copying sequana/resources/data/measles.fa.bwt -> build/lib/sequana/resources/data 2023-04-03T12:28:06,239 copying sequana/resources/data/panther.csv -> build/lib/sequana/resources/data 2023-04-03T12:28:06,245 copying sequana/resources/data/virus.bed -> build/lib/sequana/resources/data 2023-04-03T12:28:06,265 copying sequana/resources/data/measles.fa.sa -> build/lib/sequana/resources/data 2023-04-03T12:28:06,270 copying sequana/resources/data/kegg.csv -> build/lib/sequana/resources/data 2023-04-03T12:28:06,427 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-03T12:28:06,428 setuptools.SetuptoolsDeprecationWarning, 2023-04-03T12:28:06,495 installing to build/bdist.linux-armv7l/wheel 2023-04-03T12:28:06,496 running install 2023-04-03T12:28:06,556 running install_lib 2023-04-03T12:28:06,626 creating build/bdist.linux-armv7l 2023-04-03T12:28:06,627 creating build/bdist.linux-armv7l/wheel 2023-04-03T12:28:06,633 creating build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,635 copying build/lib/sequana/running_median.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,640 copying build/lib/sequana/sniffer.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,644 copying build/lib/sequana/bedtools.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,652 copying build/lib/sequana/iem.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,656 copying build/lib/sequana/vst.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,660 copying build/lib/sequana/stats.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,663 copying build/lib/sequana/vcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:06,671 creating build/bdist.linux-armv7l/wheel/sequana/rules 2023-04-03T12:28:06,673 creating build/bdist.linux-armv7l/wheel/sequana/rules/Pacbio 2023-04-03T12:28:06,675 copying build/lib/sequana/rules/Pacbio/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Pacbio 2023-04-03T12:28:06,680 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen_report 2023-04-03T12:28:06,681 copying build/lib/sequana/rules/fastq_screen_report/fastq_screen_report.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen_report 2023-04-03T12:28:06,687 creating build/bdist.linux-armv7l/wheel/sequana/rules/format_contigs 2023-04-03T12:28:06,689 copying build/lib/sequana/rules/format_contigs/format_contigs.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/format_contigs 2023-04-03T12:28:06,693 copying build/lib/sequana/rules/README.rst -> build/bdist.linux-armv7l/wheel/sequana/rules 2023-04-03T12:28:06,697 creating build/bdist.linux-armv7l/wheel/sequana/rules/rulegraph 2023-04-03T12:28:06,699 copying build/lib/sequana/rules/rulegraph/rulegraph.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/rulegraph 2023-04-03T12:28:06,704 creating build/bdist.linux-armv7l/wheel/sequana/rules/freebayes_bcf_filter 2023-04-03T12:28:06,705 copying build/lib/sequana/rules/freebayes_bcf_filter/freebayes_bcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/freebayes_bcf_filter 2023-04-03T12:28:06,711 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools 2023-04-03T12:28:06,713 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/BamPEFragmentSize 2023-04-03T12:28:06,715 copying build/lib/sequana/rules/deeptools/BamPEFragmentSize/BamPEFragmentSize.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/BamPEFragmentSize 2023-04-03T12:28:06,720 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCorrelation 2023-04-03T12:28:06,722 copying build/lib/sequana/rules/deeptools/plotCorrelation/plotCorrelation.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCorrelation 2023-04-03T12:28:06,727 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCoverage 2023-04-03T12:28:06,729 copying build/lib/sequana/rules/deeptools/plotCoverage/plotCoverage.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCoverage 2023-04-03T12:28:06,734 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/multiBamSummary 2023-04-03T12:28:06,735 copying build/lib/sequana/rules/deeptools/multiBamSummary/multiBamSummary.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/multiBamSummary 2023-04-03T12:28:06,739 copying build/lib/sequana/rules/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools 2023-04-03T12:28:06,743 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools 2023-04-03T12:28:06,746 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/CollectInsertSizeMetrics 2023-04-03T12:28:06,748 copying build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics/CollectInsertSizeMetrics.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/CollectInsertSizeMetrics 2023-04-03T12:28:06,753 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/reorderSam 2023-04-03T12:28:06,755 copying build/lib/sequana/rules/picard-tools/reorderSam/reorderSam.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/reorderSam 2023-04-03T12:28:06,760 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/mark_duplicates 2023-04-03T12:28:06,761 copying build/lib/sequana/rules/picard-tools/mark_duplicates/mark_duplicates.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/mark_duplicates 2023-04-03T12:28:06,766 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/create_sequence_dictionary 2023-04-03T12:28:06,768 copying build/lib/sequana/rules/picard-tools/create_sequence_dictionary/create_sequence_dictionary.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/create_sequence_dictionary 2023-04-03T12:28:06,773 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/add_read_group 2023-04-03T12:28:06,774 copying build/lib/sequana/rules/picard-tools/add_read_group/add_read_group.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/add_read_group 2023-04-03T12:28:06,778 copying build/lib/sequana/rules/picard-tools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools 2023-04-03T12:28:06,782 creating build/bdist.linux-armv7l/wheel/sequana/rules/spades_get_fastq 2023-04-03T12:28:06,784 copying build/lib/sequana/rules/spades_get_fastq/spades_get_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/spades_get_fastq 2023-04-03T12:28:06,789 creating build/bdist.linux-armv7l/wheel/sequana/rules/pacbio_quality 2023-04-03T12:28:06,790 copying build/lib/sequana/rules/pacbio_quality/pacbio_quality.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/pacbio_quality 2023-04-03T12:28:06,795 creating build/bdist.linux-armv7l/wheel/sequana/rules/salmon_mapping 2023-04-03T12:28:06,797 copying build/lib/sequana/rules/salmon_mapping/salmon_mapping.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/salmon_mapping 2023-04-03T12:28:06,802 creating build/bdist.linux-armv7l/wheel/sequana/rules/prokka 2023-04-03T12:28:06,804 copying build/lib/sequana/rules/prokka/prokka.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/prokka 2023-04-03T12:28:06,809 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff 2023-04-03T12:28:06,811 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_create_database 2023-04-03T12:28:06,814 copying build/lib/sequana/rules/SnpEff/snpeff_create_database/snpeff_create_database.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_create_database 2023-04-03T12:28:06,818 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta 2023-04-03T12:28:06,822 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2023-04-03T12:28:06,824 copying build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1/snpeff_add_locus_in_fasta.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2023-04-03T12:28:06,829 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2023-04-03T12:28:06,831 copying build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0/snpeff_add_locus_in_fasta.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2023-04-03T12:28:06,835 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff 2023-04-03T12:28:06,838 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.1 2023-04-03T12:28:06,840 copying build/lib/sequana/rules/SnpEff/snpeff/1.1/snpeff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.1 2023-04-03T12:28:06,845 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.0 2023-04-03T12:28:06,847 copying build/lib/sequana/rules/SnpEff/snpeff/1.0/snpeff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.0 2023-04-03T12:28:06,851 copying build/lib/sequana/rules/SnpEff/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff 2023-04-03T12:28:06,855 creating build/bdist.linux-armv7l/wheel/sequana/rules/DupRadar 2023-04-03T12:28:06,856 copying build/lib/sequana/rules/DupRadar/DupRadar.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/DupRadar 2023-04-03T12:28:06,861 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen 2023-04-03T12:28:06,863 copying build/lib/sequana/rules/fastq_screen/fastq_screen.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen 2023-04-03T12:28:06,867 creating build/bdist.linux-armv7l/wheel/sequana/rules/indel_realigner 2023-04-03T12:28:06,869 copying build/lib/sequana/rules/indel_realigner/indel_realigner.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/indel_realigner 2023-04-03T12:28:06,874 creating build/bdist.linux-armv7l/wheel/sequana/rules/copy_multiple_files 2023-04-03T12:28:06,876 copying build/lib/sequana/rules/copy_multiple_files/copy_multiple_files.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/copy_multiple_files 2023-04-03T12:28:06,881 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_sampling 2023-04-03T12:28:06,882 copying build/lib/sequana/rules/fastq_sampling/fastq_sampling.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_sampling 2023-04-03T12:28:06,887 creating build/bdist.linux-armv7l/wheel/sequana/rules/samtools_depth 2023-04-03T12:28:06,889 copying build/lib/sequana/rules/samtools_depth/samtools_depth.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/samtools_depth 2023-04-03T12:28:06,894 creating build/bdist.linux-armv7l/wheel/sequana/rules/freebayes 2023-04-03T12:28:06,895 copying build/lib/sequana/rules/freebayes/freebayes.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/freebayes 2023-04-03T12:28:06,901 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr 2023-04-03T12:28:06,904 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/metrics_peaks 2023-04-03T12:28:06,906 copying build/lib/sequana/rules/idr/metrics_peaks/metrics_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/metrics_peaks 2023-04-03T12:28:06,911 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/stats_peakCalling 2023-04-03T12:28:06,912 copying build/lib/sequana/rules/idr/stats_peakCalling/stats_peakCalling.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/stats_peakCalling 2023-04-03T12:28:06,917 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/compute_idr 2023-04-03T12:28:06,919 copying build/lib/sequana/rules/idr/compute_idr/compute_idr.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/compute_idr 2023-04-03T12:28:06,924 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/intersectionApproach 2023-04-03T12:28:06,925 copying build/lib/sequana/rules/idr/intersectionApproach/intersectionApproach.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/intersectionApproach 2023-04-03T12:28:06,930 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/union_peaks 2023-04-03T12:28:06,932 copying build/lib/sequana/rules/idr/union_peaks/union_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/union_peaks 2023-04-03T12:28:06,937 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/preIDR_dynamic 2023-04-03T12:28:06,938 copying build/lib/sequana/rules/idr/preIDR_dynamic/preIDR_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/preIDR_dynamic 2023-04-03T12:28:06,944 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/select_peaks 2023-04-03T12:28:06,946 copying build/lib/sequana/rules/idr/select_peaks/select_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/select_peaks 2023-04-03T12:28:06,950 copying build/lib/sequana/rules/idr/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/idr 2023-04-03T12:28:06,954 creating build/bdist.linux-armv7l/wheel/sequana/rules/samtools_sort 2023-04-03T12:28:06,955 copying build/lib/sequana/rules/samtools_sort/samtools_sort.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/samtools_sort 2023-04-03T12:28:06,960 creating build/bdist.linux-armv7l/wheel/sequana/rules/extract_fasta_from_bed 2023-04-03T12:28:06,962 copying build/lib/sequana/rules/extract_fasta_from_bed/extract_fasta_from_bed.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/extract_fasta_from_bed 2023-04-03T12:28:06,967 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastqc 2023-04-03T12:28:06,968 copying build/lib/sequana/rules/fastqc/fastqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastqc 2023-04-03T12:28:06,973 creating build/bdist.linux-armv7l/wheel/sequana/rules/salmon_index 2023-04-03T12:28:06,975 copying build/lib/sequana/rules/salmon_index/salmon_index.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/salmon_index 2023-04-03T12:28:06,980 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken 2023-04-03T12:28:06,982 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.1 2023-04-03T12:28:06,984 copying build/lib/sequana/rules/kraken/1.1/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.1 2023-04-03T12:28:06,990 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/2.0 2023-04-03T12:28:06,991 copying build/lib/sequana/rules/kraken/2.0/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/2.0 2023-04-03T12:28:06,996 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.0 2023-04-03T12:28:06,998 copying build/lib/sequana/rules/kraken/1.0/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.0 2023-04-03T12:28:07,003 creating build/bdist.linux-armv7l/wheel/sequana/rules/bamCoverage 2023-04-03T12:28:07,005 copying build/lib/sequana/rules/bamCoverage/bamCoverage.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bamCoverage 2023-04-03T12:28:07,010 creating build/bdist.linux-armv7l/wheel/sequana/rules/bed_to_gff 2023-04-03T12:28:07,012 copying build/lib/sequana/rules/bed_to_gff/bed_to_gff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bed_to_gff 2023-04-03T12:28:07,017 creating build/bdist.linux-armv7l/wheel/sequana/rules/bwa_bam_to_fastq 2023-04-03T12:28:07,018 copying build/lib/sequana/rules/bwa_bam_to_fastq/bwa_bam_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bwa_bam_to_fastq 2023-04-03T12:28:07,023 creating build/bdist.linux-armv7l/wheel/sequana/rules/spikes_counting 2023-04-03T12:28:07,025 copying build/lib/sequana/rules/spikes_counting/spikes_counting.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/spikes_counting 2023-04-03T12:28:07,030 creating build/bdist.linux-armv7l/wheel/sequana/rules/bam_quality_filter 2023-04-03T12:28:07,031 copying build/lib/sequana/rules/bam_quality_filter/bam_quality_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bam_quality_filter 2023-04-03T12:28:07,036 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastp 2023-04-03T12:28:07,038 copying build/lib/sequana/rules/fastp/fastp.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastp 2023-04-03T12:28:07,043 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc2 2023-04-03T12:28:07,044 copying build/lib/sequana/rules/multiqc2/multiqc2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc2 2023-04-03T12:28:07,050 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba 2023-04-03T12:28:07,052 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_markdup 2023-04-03T12:28:07,054 copying build/lib/sequana/rules/sambamba/sambamba_markdup/sambamba_markdup.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_markdup 2023-04-03T12:28:07,059 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_filter 2023-04-03T12:28:07,061 copying build/lib/sequana/rules/sambamba/sambamba_filter/sambamba_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_filter 2023-04-03T12:28:07,065 copying build/lib/sequana/rules/sambamba/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba 2023-04-03T12:28:07,069 creating build/bdist.linux-armv7l/wheel/sequana/rules/revcomp_rule 2023-04-03T12:28:07,071 copying build/lib/sequana/rules/revcomp_rule/revcomp_rule.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/revcomp_rule 2023-04-03T12:28:07,075 creating build/bdist.linux-armv7l/wheel/sequana/rules/joint_freebayes_vcf_filter 2023-04-03T12:28:07,077 copying build/lib/sequana/rules/joint_freebayes_vcf_filter/joint_freebayes_vcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/joint_freebayes_vcf_filter 2023-04-03T12:28:07,082 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs 2023-04-03T12:28:07,085 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/vcf_to_bcf 2023-04-03T12:28:07,087 copying build/lib/sequana/rules/codecs/vcf_to_bcf/vcf_to_bcf.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/vcf_to_bcf 2023-04-03T12:28:07,092 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_dsrc 2023-04-03T12:28:07,094 copying build/lib/sequana/rules/codecs/bz2_to_dsrc/bz2_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_dsrc 2023-04-03T12:28:07,099 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_bz2 2023-04-03T12:28:07,101 copying build/lib/sequana/rules/codecs/dsrc_to_bz2/dsrc_to_bz2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_bz2 2023-04-03T12:28:07,105 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_dsrc 2023-04-03T12:28:07,107 copying build/lib/sequana/rules/codecs/gz_to_dsrc/gz_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_dsrc 2023-04-03T12:28:07,112 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_fastq 2023-04-03T12:28:07,114 copying build/lib/sequana/rules/codecs/gz_to_fastq/gz_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_fastq 2023-04-03T12:28:07,118 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_bz2 2023-04-03T12:28:07,120 copying build/lib/sequana/rules/codecs/fastq_to_bz2/fastq_to_bz2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_bz2 2023-04-03T12:28:07,125 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_fastq 2023-04-03T12:28:07,126 copying build/lib/sequana/rules/codecs/dsrc_to_fastq/dsrc_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_fastq 2023-04-03T12:28:07,131 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_dsrc 2023-04-03T12:28:07,133 copying build/lib/sequana/rules/codecs/fastq_to_dsrc/fastq_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_dsrc 2023-04-03T12:28:07,137 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_fastq 2023-04-03T12:28:07,139 copying build/lib/sequana/rules/codecs/bz2_to_fastq/bz2_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_fastq 2023-04-03T12:28:07,143 copying build/lib/sequana/rules/codecs/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs 2023-04-03T12:28:07,147 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_gz 2023-04-03T12:28:07,148 copying build/lib/sequana/rules/codecs/fastq_to_gz/fastq_to_gz.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_gz 2023-04-03T12:28:07,153 creating build/bdist.linux-armv7l/wheel/sequana/rules/rnaseqc 2023-04-03T12:28:07,155 copying build/lib/sequana/rules/rnaseqc/rnaseqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/rnaseqc 2023-04-03T12:28:07,160 creating build/bdist.linux-armv7l/wheel/sequana/rules/SARTools 2023-04-03T12:28:07,162 copying build/lib/sequana/rules/SARTools/SARTools.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SARTools 2023-04-03T12:28:07,167 creating build/bdist.linux-armv7l/wheel/sequana/rules/cutadapt 2023-04-03T12:28:07,168 copying build/lib/sequana/rules/cutadapt/cutadapt.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/cutadapt 2023-04-03T12:28:07,174 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc 2023-04-03T12:28:07,175 copying build/lib/sequana/rules/multiqc/multiqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc 2023-04-03T12:28:07,180 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc/2.0 2023-04-03T12:28:07,182 copying build/lib/sequana/rules/multiqc/2.0/multiqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc/2.0 2023-04-03T12:28:07,187 creating build/bdist.linux-armv7l/wheel/sequana/rules/igvtools 2023-04-03T12:28:07,188 copying build/lib/sequana/rules/igvtools/igvtools.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/igvtools 2023-04-03T12:28:07,193 creating build/bdist.linux-armv7l/wheel/sequana/rules/dag 2023-04-03T12:28:07,195 copying build/lib/sequana/rules/dag/dag.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/dag 2023-04-03T12:28:07,198 copying build/lib/sequana/rules/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules 2023-04-03T12:28:07,203 creating build/bdist.linux-armv7l/wheel/sequana/rules/summary_pipeline 2023-04-03T12:28:07,204 copying build/lib/sequana/rules/summary_pipeline/summary_pipeline.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/summary_pipeline 2023-04-03T12:28:07,209 creating build/bdist.linux-armv7l/wheel/sequana/rules/freebayes_vcf_filter 2023-04-03T12:28:07,211 copying build/lib/sequana/rules/freebayes_vcf_filter/freebayes_vcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/freebayes_vcf_filter 2023-04-03T12:28:07,215 creating build/bdist.linux-armv7l/wheel/sequana/rules/miRNA_count_dynamic 2023-04-03T12:28:07,217 copying build/lib/sequana/rules/miRNA_count_dynamic/miRNA_count_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/miRNA_count_dynamic 2023-04-03T12:28:07,221 copying build/lib/sequana/kmer.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,225 copying build/lib/sequana/freebayes_bcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,229 copying build/lib/sequana/demultiplex.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,233 copying build/lib/sequana/fastq.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,239 copying build/lib/sequana/featurecounts.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,244 copying build/lib/sequana/iuapc.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,249 creating build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,251 copying build/lib/sequana/enrichment/quickgo.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,255 copying build/lib/sequana/enrichment/panther.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,260 copying build/lib/sequana/enrichment/gsea.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,264 copying build/lib/sequana/enrichment/mart.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,267 copying build/lib/sequana/enrichment/ontology.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,271 copying build/lib/sequana/enrichment/plot_go_terms.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,275 copying build/lib/sequana/enrichment/kegg.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,281 copying build/lib/sequana/enrichment/uniprot_enrichment.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,285 copying build/lib/sequana/enrichment/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2023-04-03T12:28:07,288 copying build/lib/sequana/idr.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,293 copying build/lib/sequana/contigs.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,297 copying build/lib/sequana/macs3.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,301 copying build/lib/sequana/gff3.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,306 copying build/lib/sequana/vcftools.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,310 copying build/lib/sequana/errors.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,314 copying build/lib/sequana/freebayes_vcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,318 copying build/lib/sequana/phantom.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,323 copying build/lib/sequana/assembly.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,327 copying build/lib/sequana/fastqc.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,331 copying build/lib/sequana/canu_scanner.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,335 copying build/lib/sequana/summary.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,339 copying build/lib/sequana/misc.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,344 creating build/bdist.linux-armv7l/wheel/sequana/resources 2023-04-03T12:28:07,347 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,349 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,353 copying build/lib/sequana/resources/testing/test_snpeff_ref.gb -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,390 copying build/lib/sequana/resources/testing/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,394 copying build/lib/sequana/resources/testing/test_index_mapper.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,398 copying build/lib/sequana/resources/testing/test_coverage.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,425 copying build/lib/sequana/resources/testing/test_taxon_rtd.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,428 copying build/lib/sequana/resources/testing/test.fasta -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,433 copying build/lib/sequana/resources/testing/test_expdesign_hiseq_duplicated_index.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,436 copying build/lib/sequana/resources/testing/test_expdesign_rubicon.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,440 copying build/lib/sequana/resources/testing/test_samplesheet_wrong_characters.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,444 copying build/lib/sequana/resources/testing/test_blast_ebi.xml -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,466 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv.fixed -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,469 copying build/lib/sequana/resources/testing/test_blast_local.xml -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,474 copying build/lib/sequana/resources/testing/test_expdesign_generic.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,478 copying build/lib/sequana/resources/testing/test_kraken.out.summary -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,481 copying build/lib/sequana/resources/testing/test_expdesign_Hm2.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,485 copying build/lib/sequana/resources/testing/adapters_with_duplicates.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,490 copying build/lib/sequana/resources/testing/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,494 copying build/lib/sequana/resources/testing/test_dag.ann.dot -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2023-04-03T12:28:07,499 creating build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,501 copying build/lib/sequana/resources/css/report.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,506 copying build/lib/sequana/resources/css/jquery.dataTables.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,511 copying build/lib/sequana/resources/css/jquery.dropdown.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,514 copying build/lib/sequana/resources/css/buttons.dataTables.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,518 copying build/lib/sequana/resources/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,528 copying build/lib/sequana/resources/css/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2023-04-03T12:28:07,532 creating build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,533 copying build/lib/sequana/resources/templates/rnadiff_light_template.R -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,538 copying build/lib/sequana/resources/templates/vcf_diff.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,542 copying build/lib/sequana/resources/templates/joint_calling.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,546 copying build/lib/sequana/resources/templates/base.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,549 copying build/lib/sequana/resources/templates/standard.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,553 copying build/lib/sequana/resources/templates/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2023-04-03T12:28:07,557 creating build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,559 copying build/lib/sequana/resources/images/no_data.jpg -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,563 copying build/lib/sequana/resources/images/no_data.png -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,567 copying build/lib/sequana/resources/images/logo_256x256.png -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,575 copying build/lib/sequana/resources/images/Institut_Pasteur.png -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,581 copying build/lib/sequana/resources/images/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2023-04-03T12:28:07,585 creating build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2023-04-03T12:28:07,586 copying build/lib/sequana/resources/canvas/bar.py -> build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2023-04-03T12:28:07,591 copying build/lib/sequana/resources/canvas/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2023-04-03T12:28:07,595 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc 2023-04-03T12:28:07,598 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnadiff_compare 2023-04-03T12:28:07,600 copying build/lib/sequana/resources/doc/rnadiff_compare/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnadiff_compare 2023-04-03T12:28:07,604 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0 2023-04-03T12:28:07,607 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1 2023-04-03T12:28:07,611 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_1 2023-04-03T12:28:07,612 copying build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_1 2023-04-03T12:28:07,617 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_2 2023-04-03T12:28:07,618 copying build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_2 2023-04-03T12:28:07,623 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_0 2023-04-03T12:28:07,624 copying build/lib/sequana/resources/doc/rnaseq_0/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1/feature_counts_0 2023-04-03T12:28:07,628 copying build/lib/sequana/resources/doc/rnaseq_0/sample1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0/sample1 2023-04-03T12:28:07,630 copying build/lib/sequana/resources/doc/rnaseq_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc/rnaseq_0 2023-04-03T12:28:07,633 copying build/lib/sequana/resources/doc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc 2023-04-03T12:28:07,637 creating build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2023-04-03T12:28:07,639 copying build/lib/sequana/resources/snpeff/snpEff.config -> build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2023-04-03T12:28:07,644 copying build/lib/sequana/resources/snpeff/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2023-04-03T12:28:07,648 creating build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,650 copying build/lib/sequana/resources/js/jquery.dataTables.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,658 copying build/lib/sequana/resources/js/buttons.print.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,662 copying build/lib/sequana/resources/js/jquery-3.5.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,670 copying build/lib/sequana/resources/js/jquery.tocPlugin.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,674 copying build/lib/sequana/resources/js/jquery-3.1.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,683 copying build/lib/sequana/resources/js/papaparse.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,687 copying build/lib/sequana/resources/js/jquery.dropdown.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,691 copying build/lib/sequana/resources/js/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,697 copying build/lib/sequana/resources/js/jquery-3.2.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,707 copying build/lib/sequana/resources/js/jquery-2.1.1.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,725 copying build/lib/sequana/resources/js/canvasjs.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,743 copying build/lib/sequana/resources/js/buttons.html5.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,748 copying build/lib/sequana/resources/js/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,751 copying build/lib/sequana/resources/js/dataTables.buttons.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2023-04-03T12:28:07,757 creating build/bdist.linux-armv7l/wheel/sequana/resources/examples 2023-04-03T12:28:07,759 copying build/lib/sequana/resources/examples/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2023-04-03T12:28:07,763 copying build/lib/sequana/resources/examples/test.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2023-04-03T12:28:07,768 copying build/lib/sequana/resources/examples/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2023-04-03T12:28:07,771 copying build/lib/sequana/resources/examples/test_kraken.out -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2023-04-03T12:28:07,778 creating build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,781 copying build/lib/sequana/resources/data/measles.fa.amb -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,785 copying build/lib/sequana/resources/data/measles.fa.ann -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,788 copying build/lib/sequana/resources/data/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,792 copying build/lib/sequana/resources/data/Hm2_GTGAAA_L005_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,802 copying build/lib/sequana/resources/data/measles.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,807 copying build/lib/sequana/resources/data/Hm2_GTGAAA_L005_R2_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,821 copying build/lib/sequana/resources/data/measles.fa.pac -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,826 copying build/lib/sequana/resources/data/measles.fa.bwt -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,831 copying build/lib/sequana/resources/data/phiX174.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,835 copying build/lib/sequana/resources/data/panther.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,839 copying build/lib/sequana/resources/data/virus.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,862 copying build/lib/sequana/resources/data/measles.fa.sa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,867 copying build/lib/sequana/resources/data/kegg.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,897 copying build/lib/sequana/resources/data/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2023-04-03T12:28:07,901 copying build/lib/sequana/resources/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources 2023-04-03T12:28:07,904 copying build/lib/sequana/gtf_fixer.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,908 copying build/lib/sequana/cnv.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,912 copying build/lib/sequana/databases.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,917 copying build/lib/sequana/protein.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,921 copying build/lib/sequana/mgi.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,924 copying build/lib/sequana/sequence.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,930 copying build/lib/sequana/salmon.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,934 copying build/lib/sequana/rnadiff.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,943 copying build/lib/sequana/snpeff.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,947 copying build/lib/sequana/ribodesigner.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:07,952 creating build/bdist.linux-armv7l/wheel/sequana/kraken 2023-04-03T12:28:07,954 copying build/lib/sequana/kraken/analysis.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2023-04-03T12:28:07,962 copying build/lib/sequana/kraken/multikraken.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2023-04-03T12:28:07,966 copying build/lib/sequana/kraken/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2023-04-03T12:28:07,971 creating build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,973 copying build/lib/sequana/modules_report/bwa_bam_to_fastq.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,977 copying build/lib/sequana/modules_report/bamqc.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,981 copying build/lib/sequana/modules_report/base_module.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,985 copying build/lib/sequana/modules_report/variant_calling.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,989 copying build/lib/sequana/modules_report/fastqc.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,993 copying build/lib/sequana/modules_report/summary.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:07,997 copying build/lib/sequana/modules_report/panther_enrichment.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,002 copying build/lib/sequana/modules_report/joint_calling.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,005 copying build/lib/sequana/modules_report/rnadiff.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,011 copying build/lib/sequana/modules_report/kraken.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,018 copying build/lib/sequana/modules_report/pacbio_input_bam.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,022 copying build/lib/sequana/modules_report/kegg_enrichment.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,027 copying build/lib/sequana/modules_report/multi_summary.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,032 copying build/lib/sequana/modules_report/trf.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,035 copying build/lib/sequana/modules_report/phix.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,040 copying build/lib/sequana/modules_report/fastq_stats.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,044 copying build/lib/sequana/modules_report/quast.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,048 copying build/lib/sequana/modules_report/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,053 copying build/lib/sequana/modules_report/uniprot_enrichment.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,058 copying build/lib/sequana/modules_report/cutadapt.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,063 copying build/lib/sequana/modules_report/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2023-04-03T12:28:08,066 copying build/lib/sequana/criteria.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,071 copying build/lib/sequana/itol.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,075 copying build/lib/sequana/tools.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,081 copying build/lib/sequana/trf.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,085 copying build/lib/sequana/kegg.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,089 copying build/lib/sequana/phred.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,094 copying build/lib/sequana/bed.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,098 copying build/lib/sequana/codon.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,102 copying build/lib/sequana/fasta_gff_correction.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,108 creating build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,110 copying build/lib/sequana/viz/linkage.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,114 copying build/lib/sequana/viz/heatmap.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,119 copying build/lib/sequana/viz/mds.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,123 copying build/lib/sequana/viz/volcano.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,127 copying build/lib/sequana/viz/hinton.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,131 copying build/lib/sequana/viz/hist2d.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,135 copying build/lib/sequana/viz/dendogram.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,140 copying build/lib/sequana/viz/pca.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,144 copying build/lib/sequana/viz/venn.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,147 copying build/lib/sequana/viz/anova.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,151 copying build/lib/sequana/viz/isomap.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,155 copying build/lib/sequana/viz/corrplot.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,160 copying build/lib/sequana/viz/imshow.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,164 copying build/lib/sequana/viz/scatter.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,168 copying build/lib/sequana/viz/boxplot.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,171 copying build/lib/sequana/viz/clusterisation.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,176 copying build/lib/sequana/viz/core.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,179 copying build/lib/sequana/viz/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2023-04-03T12:28:08,183 copying build/lib/sequana/compare.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,189 copying build/lib/sequana/homer.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,192 copying build/lib/sequana/lazyimports.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,197 copying build/lib/sequana/krona.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,202 creating build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,203 copying build/lib/sequana/utils/tree.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,208 copying build/lib/sequana/utils/datatables_js.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,213 copying build/lib/sequana/utils/df2html.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,217 copying build/lib/sequana/utils/config.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,220 copying build/lib/sequana/utils/pandas.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,224 copying build/lib/sequana/utils/singleton.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,227 copying build/lib/sequana/utils/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2023-04-03T12:28:08,230 copying build/lib/sequana/pacbio.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,237 copying build/lib/sequana/cigar.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,243 creating build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,244 copying build/lib/sequana/multiqc/laa.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,248 copying build/lib/sequana/multiqc/quality_control.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,253 copying build/lib/sequana/multiqc/config.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,256 copying build/lib/sequana/multiqc/pacbio_qc.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,261 copying build/lib/sequana/multiqc/isoseq_qc.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,265 copying build/lib/sequana/multiqc/bamtools_stats.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,269 copying build/lib/sequana/multiqc/kraken.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,274 copying build/lib/sequana/multiqc/plots.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,277 copying build/lib/sequana/multiqc/multiqc_config.yaml -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,282 copying build/lib/sequana/multiqc/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,286 copying build/lib/sequana/multiqc/pacbio_amplicon.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,290 copying build/lib/sequana/multiqc/isoseq.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,294 copying build/lib/sequana/multiqc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2023-04-03T12:28:08,298 copying build/lib/sequana/cpg_islands.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,301 copying build/lib/sequana/lazy.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,305 copying build/lib/sequana/bamtools.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,312 copying build/lib/sequana/find_motif.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,316 copying build/lib/sequana/coverage.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,320 copying build/lib/sequana/taxonomy.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,325 copying build/lib/sequana/mh.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,330 copying build/lib/sequana/mixture.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,335 copying build/lib/sequana/pacbio_amplicon.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,341 copying build/lib/sequana/isoseq.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,348 creating build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,351 copying build/lib/sequana/scripts/common.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,356 creating build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,359 copying build/lib/sequana/scripts/main/enrichment_panther.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,364 copying build/lib/sequana/scripts/main/feature_count.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,368 copying build/lib/sequana/scripts/main/fastq.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,372 copying build/lib/sequana/scripts/main/gff_to_gtf.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,377 copying build/lib/sequana/scripts/main/gff_to_light_gff.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,381 copying build/lib/sequana/scripts/main/utils.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,385 copying build/lib/sequana/scripts/main/lane_merging.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,390 copying build/lib/sequana/scripts/main/summary.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,394 copying build/lib/sequana/scripts/main/mapping.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,398 copying build/lib/sequana/scripts/main/enrichment_uniprot.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,404 copying build/lib/sequana/scripts/main/enrichment_kegg.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,408 copying build/lib/sequana/scripts/main/gtf_fixer.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,413 copying build/lib/sequana/scripts/main/variants_comparison.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,417 copying build/lib/sequana/scripts/main/salmon.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,422 copying build/lib/sequana/scripts/main/rnadiff.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,428 copying build/lib/sequana/scripts/main/samplesheet.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,432 copying build/lib/sequana/scripts/main/ribodesigner.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,436 copying build/lib/sequana/scripts/main/biomart.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,440 copying build/lib/sequana/scripts/main/main.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,445 copying build/lib/sequana/scripts/main/taxonomy.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,449 copying build/lib/sequana/scripts/main/fasta.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,453 copying build/lib/sequana/scripts/main/rnaseq_compare.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,457 copying build/lib/sequana/scripts/main/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/scripts/main 2023-04-03T12:28:08,461 copying build/lib/sequana/scripts/substractor.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,466 copying build/lib/sequana/scripts/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,472 copying build/lib/sequana/scripts/taxonomy.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,477 copying build/lib/sequana/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2023-04-03T12:28:08,480 copying build/lib/sequana/fasta.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,486 copying build/lib/sequana/genbank.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,492 creating build/bdist.linux-armv7l/wheel/sequana/plots 2023-04-03T12:28:08,494 copying build/lib/sequana/plots/canvasjs_linegraph.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2023-04-03T12:28:08,498 copying build/lib/sequana/plots/canvasjs_base.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2023-04-03T12:28:08,502 copying build/lib/sequana/plots/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2023-04-03T12:28:08,505 copying build/lib/sequana/datatools.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,509 copying build/lib/sequana/__init__.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,512 copying build/lib/sequana/frip.py -> build/bdist.linux-armv7l/wheel/sequana 2023-04-03T12:28:08,515 running install_egg_info 2023-04-03T12:28:08,678 running egg_info 2023-04-03T12:28:08,743 writing sequana.egg-info/PKG-INFO 2023-04-03T12:28:08,747 writing dependency_links to sequana.egg-info/dependency_links.txt 2023-04-03T12:28:08,753 writing entry points to sequana.egg-info/entry_points.txt 2023-04-03T12:28:08,757 writing requirements to sequana.egg-info/requires.txt 2023-04-03T12:28:08,759 writing top-level names to sequana.egg-info/top_level.txt 2023-04-03T12:28:09,213 reading manifest file 'sequana.egg-info/SOURCES.txt' 2023-04-03T12:28:09,271 reading manifest template 'MANIFEST.in' 2023-04-03T12:28:09,278 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-04-03T12:28:09,283 warning: no previously-included files matching '*pyc' found under directory '*' 2023-04-03T12:28:10,503 warning: no files found matching 'test/requirements*txt' 2023-04-03T12:28:10,508 warning: no previously-included files matching '*' found under directory 'sequana/methylation' 2023-04-03T12:28:10,511 warning: no previously-included files matching '*' found under directory 'test' 2023-04-03T12:28:10,515 warning: no previously-included files matching '*' found under directory 'doc' 2023-04-03T12:28:10,518 warning: no previously-included files found matching 'sequana/rm2.py' 2023-04-03T12:28:10,519 adding license file 'LICENSE' 2023-04-03T12:28:10,584 writing manifest file 'sequana.egg-info/SOURCES.txt' 2023-04-03T12:28:10,589 Copying sequana.egg-info to build/bdist.linux-armv7l/wheel/sequana-0.15.0-py3.7.egg-info 2023-04-03T12:28:10,618 running install_scripts 2023-04-03T12:28:10,702 creating build/bdist.linux-armv7l/wheel/sequana-0.15.0.dist-info/WHEEL 2023-04-03T12:28:10,707 creating '/tmp/pip-wheel-p5w5eham/sequana-0.15.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-03T12:28:10,713 adding 'sequana/__init__.py' 2023-04-03T12:28:10,717 adding 'sequana/assembly.py' 2023-04-03T12:28:10,736 adding 'sequana/bamtools.py' 2023-04-03T12:28:10,741 adding 'sequana/bed.py' 2023-04-03T12:28:10,764 adding 'sequana/bedtools.py' 2023-04-03T12:28:10,769 adding 'sequana/canu_scanner.py' 2023-04-03T12:28:10,773 adding 'sequana/cigar.py' 2023-04-03T12:28:10,776 adding 'sequana/cnv.py' 2023-04-03T12:28:10,779 adding 'sequana/codon.py' 2023-04-03T12:28:10,784 adding 'sequana/compare.py' 2023-04-03T12:28:10,789 adding 'sequana/contigs.py' 2023-04-03T12:28:10,793 adding 'sequana/coverage.py' 2023-04-03T12:28:10,796 adding 'sequana/cpg_islands.py' 2023-04-03T12:28:10,799 adding 'sequana/criteria.py' 2023-04-03T12:28:10,805 adding 'sequana/databases.py' 2023-04-03T12:28:10,808 adding 'sequana/datatools.py' 2023-04-03T12:28:10,812 adding 'sequana/demultiplex.py' 2023-04-03T12:28:10,815 adding 'sequana/errors.py' 2023-04-03T12:28:10,819 adding 'sequana/fasta.py' 2023-04-03T12:28:10,824 adding 'sequana/fasta_gff_correction.py' 2023-04-03T12:28:10,837 adding 'sequana/fastq.py' 2023-04-03T12:28:10,841 adding 'sequana/fastqc.py' 2023-04-03T12:28:10,847 adding 'sequana/featurecounts.py' 2023-04-03T12:28:10,851 adding 'sequana/find_motif.py' 2023-04-03T12:28:10,855 adding 'sequana/freebayes_bcf_filter.py' 2023-04-03T12:28:10,859 adding 'sequana/freebayes_vcf_filter.py' 2023-04-03T12:28:10,862 adding 'sequana/frip.py' 2023-04-03T12:28:10,865 adding 'sequana/genbank.py' 2023-04-03T12:28:10,873 adding 'sequana/gff3.py' 2023-04-03T12:28:10,876 adding 'sequana/gtf_fixer.py' 2023-04-03T12:28:10,879 adding 'sequana/homer.py' 2023-04-03T12:28:10,882 adding 'sequana/idr.py' 2023-04-03T12:28:10,887 adding 'sequana/iem.py' 2023-04-03T12:28:10,894 adding 'sequana/isoseq.py' 2023-04-03T12:28:10,897 adding 'sequana/itol.py' 2023-04-03T12:28:10,901 adding 'sequana/iuapc.py' 2023-04-03T12:28:10,904 adding 'sequana/kegg.py' 2023-04-03T12:28:10,906 adding 'sequana/kmer.py' 2023-04-03T12:28:10,909 adding 'sequana/krona.py' 2023-04-03T12:28:10,912 adding 'sequana/lazy.py' 2023-04-03T12:28:10,915 adding 'sequana/lazyimports.py' 2023-04-03T12:28:10,919 adding 'sequana/macs3.py' 2023-04-03T12:28:10,922 adding 'sequana/mgi.py' 2023-04-03T12:28:10,925 adding 'sequana/mh.py' 2023-04-03T12:28:10,928 adding 'sequana/misc.py' 2023-04-03T12:28:10,933 adding 'sequana/mixture.py' 2023-04-03T12:28:10,944 adding 'sequana/pacbio.py' 2023-04-03T12:28:10,949 adding 'sequana/pacbio_amplicon.py' 2023-04-03T12:28:10,955 adding 'sequana/phantom.py' 2023-04-03T12:28:10,959 adding 'sequana/phred.py' 2023-04-03T12:28:10,961 adding 'sequana/protein.py' 2023-04-03T12:28:10,966 adding 'sequana/ribodesigner.py' 2023-04-03T12:28:10,980 adding 'sequana/rnadiff.py' 2023-04-03T12:28:10,985 adding 'sequana/running_median.py' 2023-04-03T12:28:10,989 adding 'sequana/salmon.py' 2023-04-03T12:28:10,998 adding 'sequana/sequence.py' 2023-04-03T12:28:11,002 adding 'sequana/sniffer.py' 2023-04-03T12:28:11,006 adding 'sequana/snpeff.py' 2023-04-03T12:28:11,009 adding 'sequana/stats.py' 2023-04-03T12:28:11,013 adding 'sequana/summary.py' 2023-04-03T12:28:11,018 adding 'sequana/taxonomy.py' 2023-04-03T12:28:11,025 adding 'sequana/tools.py' 2023-04-03T12:28:11,029 adding 'sequana/trf.py' 2023-04-03T12:28:11,034 adding 'sequana/vcf_filter.py' 2023-04-03T12:28:11,037 adding 'sequana/vcftools.py' 2023-04-03T12:28:11,040 adding 'sequana/vst.py' 2023-04-03T12:28:11,043 adding 'sequana/enrichment/__init__.py' 2023-04-03T12:28:11,046 adding 'sequana/enrichment/gsea.py' 2023-04-03T12:28:11,053 adding 'sequana/enrichment/kegg.py' 2023-04-03T12:28:11,057 adding 'sequana/enrichment/mart.py' 2023-04-03T12:28:11,059 adding 'sequana/enrichment/ontology.py' 2023-04-03T12:28:11,065 adding 'sequana/enrichment/panther.py' 2023-04-03T12:28:11,070 adding 'sequana/enrichment/plot_go_terms.py' 2023-04-03T12:28:11,074 adding 'sequana/enrichment/quickgo.py' 2023-04-03T12:28:11,079 adding 'sequana/enrichment/uniprot_enrichment.py' 2023-04-03T12:28:11,082 adding 'sequana/kraken/__init__.py' 2023-04-03T12:28:11,097 adding 'sequana/kraken/analysis.py' 2023-04-03T12:28:11,101 adding 'sequana/kraken/multikraken.py' 2023-04-03T12:28:11,104 adding 'sequana/modules_report/__init__.py' 2023-04-03T12:28:11,107 adding 'sequana/modules_report/bamqc.py' 2023-04-03T12:28:11,112 adding 'sequana/modules_report/base_module.py' 2023-04-03T12:28:11,115 adding 'sequana/modules_report/bwa_bam_to_fastq.py' 2023-04-03T12:28:11,122 adding 'sequana/modules_report/coverage.py' 2023-04-03T12:28:11,129 adding 'sequana/modules_report/cutadapt.py' 2023-04-03T12:28:11,133 adding 'sequana/modules_report/fastq_stats.py' 2023-04-03T12:28:11,135 adding 'sequana/modules_report/fastqc.py' 2023-04-03T12:28:11,138 adding 'sequana/modules_report/joint_calling.py' 2023-04-03T12:28:11,142 adding 'sequana/modules_report/kegg_enrichment.py' 2023-04-03T12:28:11,146 adding 'sequana/modules_report/kraken.py' 2023-04-03T12:28:11,151 adding 'sequana/modules_report/multi_summary.py' 2023-04-03T12:28:11,155 adding 'sequana/modules_report/pacbio_input_bam.py' 2023-04-03T12:28:11,159 adding 'sequana/modules_report/panther_enrichment.py' 2023-04-03T12:28:11,163 adding 'sequana/modules_report/phix.py' 2023-04-03T12:28:11,165 adding 'sequana/modules_report/quast.py' 2023-04-03T12:28:11,171 adding 'sequana/modules_report/rnadiff.py' 2023-04-03T12:28:11,175 adding 'sequana/modules_report/summary.py' 2023-04-03T12:28:11,178 adding 'sequana/modules_report/trf.py' 2023-04-03T12:28:11,182 adding 'sequana/modules_report/uniprot_enrichment.py' 2023-04-03T12:28:11,186 adding 'sequana/modules_report/variant_calling.py' 2023-04-03T12:28:11,189 adding 'sequana/multiqc/__init__.py' 2023-04-03T12:28:11,193 adding 'sequana/multiqc/bamtools_stats.py' 2023-04-03T12:28:11,195 adding 'sequana/multiqc/config.py' 2023-04-03T12:28:11,199 adding 'sequana/multiqc/coverage.py' 2023-04-03T12:28:11,203 adding 'sequana/multiqc/isoseq.py' 2023-04-03T12:28:11,206 adding 'sequana/multiqc/isoseq_qc.py' 2023-04-03T12:28:11,210 adding 'sequana/multiqc/kraken.py' 2023-04-03T12:28:11,213 adding 'sequana/multiqc/laa.py' 2023-04-03T12:28:11,216 adding 'sequana/multiqc/multiqc_config.yaml' 2023-04-03T12:28:11,219 adding 'sequana/multiqc/pacbio_amplicon.py' 2023-04-03T12:28:11,223 adding 'sequana/multiqc/pacbio_qc.py' 2023-04-03T12:28:11,226 adding 'sequana/multiqc/plots.py' 2023-04-03T12:28:11,229 adding 'sequana/multiqc/quality_control.py' 2023-04-03T12:28:11,232 adding 'sequana/plots/__init__.py' 2023-04-03T12:28:11,235 adding 'sequana/plots/canvasjs_base.py' 2023-04-03T12:28:11,239 adding 'sequana/plots/canvasjs_linegraph.py' 2023-04-03T12:28:11,242 adding 'sequana/resources/__init__.py' 2023-04-03T12:28:11,244 adding 'sequana/resources/canvas/__init__.py' 2023-04-03T12:28:11,247 adding 'sequana/resources/canvas/bar.py' 2023-04-03T12:28:11,250 adding 'sequana/resources/css/__init__.py' 2023-04-03T12:28:11,274 adding 'sequana/resources/css/bootstrap.min.css' 2023-04-03T12:28:11,280 adding 'sequana/resources/css/buttons.dataTables.min.css' 2023-04-03T12:28:11,284 adding 'sequana/resources/css/jquery.dataTables.min.css' 2023-04-03T12:28:11,287 adding 'sequana/resources/css/jquery.dropdown.min.css' 2023-04-03T12:28:11,290 adding 'sequana/resources/css/report.css' 2023-04-03T12:28:11,322 adding 'sequana/resources/data/Hm2_GTGAAA_L005_R1_001.fastq.gz' 2023-04-03T12:28:11,356 adding 'sequana/resources/data/Hm2_GTGAAA_L005_R2_001.fastq.gz' 2023-04-03T12:28:11,361 adding 'sequana/resources/data/README.rst' 2023-04-03T12:28:11,364 adding 'sequana/resources/data/__init__.py' 2023-04-03T12:28:11,509 adding 'sequana/resources/data/kegg.csv' 2023-04-03T12:28:11,535 adding 'sequana/resources/data/measles.fa' 2023-04-03T12:28:11,538 adding 'sequana/resources/data/measles.fa.amb' 2023-04-03T12:28:11,540 adding 'sequana/resources/data/measles.fa.ann' 2023-04-03T12:28:11,547 adding 'sequana/resources/data/measles.fa.bwt' 2023-04-03T12:28:11,550 adding 'sequana/resources/data/measles.fa.pac' 2023-04-03T12:28:11,556 adding 'sequana/resources/data/measles.fa.sa' 2023-04-03T12:28:11,560 adding 'sequana/resources/data/panther.csv' 2023-04-03T12:28:11,566 adding 'sequana/resources/data/phiX174.fa' 2023-04-03T12:28:11,714 adding 'sequana/resources/data/virus.bed' 2023-04-03T12:28:11,723 adding 'sequana/resources/doc/__init__.py' 2023-04-03T12:28:11,726 adding 'sequana/resources/doc/rnadiff_compare/__init__.py' 2023-04-03T12:28:11,729 adding 'sequana/resources/doc/rnaseq_0/__init__.py' 2023-04-03T12:28:11,732 adding 'sequana/resources/doc/rnaseq_0/sample1/__init__.py' 2023-04-03T12:28:11,735 adding 'sequana/resources/doc/rnaseq_0/sample1/feature_counts_0/__init__.py' 2023-04-03T12:28:11,738 adding 'sequana/resources/doc/rnaseq_0/sample1/feature_counts_1/__init__.py' 2023-04-03T12:28:11,741 adding 'sequana/resources/doc/rnaseq_0/sample1/feature_counts_2/__init__.py' 2023-04-03T12:28:11,744 adding 'sequana/resources/examples/README.rst' 2023-04-03T12:28:11,746 adding 'sequana/resources/examples/__init__.py' 2023-04-03T12:28:11,752 adding 'sequana/resources/examples/test.fastq.gz' 2023-04-03T12:28:11,756 adding 'sequana/resources/examples/test_kraken.out' 2023-04-03T12:28:11,768 adding 'sequana/resources/images/Institut_Pasteur.png' 2023-04-03T12:28:11,771 adding 'sequana/resources/images/__init__.py' 2023-04-03T12:28:11,793 adding 'sequana/resources/images/logo_256x256.png' 2023-04-03T12:28:11,798 adding 'sequana/resources/images/no_data.jpg' 2023-04-03T12:28:11,802 adding 'sequana/resources/images/no_data.png' 2023-04-03T12:28:11,805 adding 'sequana/resources/js/__init__.py' 2023-04-03T12:28:11,815 adding 'sequana/resources/js/bootstrap.min.js' 2023-04-03T12:28:11,822 adding 'sequana/resources/js/buttons.html5.min.js' 2023-04-03T12:28:11,825 adding 'sequana/resources/js/buttons.print.min.js' 2023-04-03T12:28:11,880 adding 'sequana/resources/js/canvasjs.min.js' 2023-04-03T12:28:11,890 adding 'sequana/resources/js/dataTables.buttons.min.js' 2023-04-03T12:28:11,991 adding 'sequana/resources/js/jquery-2.1.1.js' 2023-04-03T12:28:12,025 adding 'sequana/resources/js/jquery-3.1.1.min.js' 2023-04-03T12:28:12,057 adding 'sequana/resources/js/jquery-3.2.1.min.js' 2023-04-03T12:28:12,089 adding 'sequana/resources/js/jquery-3.5.1.min.js' 2023-04-03T12:28:12,119 adding 'sequana/resources/js/jquery.dataTables.min.js' 2023-04-03T12:28:12,124 adding 'sequana/resources/js/jquery.dropdown.min.js' 2023-04-03T12:28:12,127 adding 'sequana/resources/js/jquery.tocPlugin.js' 2023-04-03T12:28:12,132 adding 'sequana/resources/js/papaparse.min.js' 2023-04-03T12:28:12,135 adding 'sequana/resources/snpeff/__init__.py' 2023-04-03T12:28:12,139 adding 'sequana/resources/snpeff/snpEff.config' 2023-04-03T12:28:12,142 adding 'sequana/resources/templates/__init__.py' 2023-04-03T12:28:12,145 adding 'sequana/resources/templates/base.html' 2023-04-03T12:28:12,148 adding 'sequana/resources/templates/joint_calling.html' 2023-04-03T12:28:12,151 adding 'sequana/resources/templates/rnadiff_light_template.R' 2023-04-03T12:28:12,154 adding 'sequana/resources/templates/standard.html' 2023-04-03T12:28:12,157 adding 'sequana/resources/templates/vcf_diff.html' 2023-04-03T12:28:12,161 adding 'sequana/resources/testing/README.rst' 2023-04-03T12:28:12,164 adding 'sequana/resources/testing/__init__.py' 2023-04-03T12:28:12,166 adding 'sequana/resources/testing/adapters_with_duplicates.fa' 2023-04-03T12:28:12,185 adding 'sequana/resources/testing/test.fasta' 2023-04-03T12:28:12,217 adding 'sequana/resources/testing/test_blast_ebi.xml' 2023-04-03T12:28:12,227 adding 'sequana/resources/testing/test_blast_local.xml' 2023-04-03T12:28:12,309 adding 'sequana/resources/testing/test_coverage.csv' 2023-04-03T12:28:12,318 adding 'sequana/resources/testing/test_dag.ann.dot' 2023-04-03T12:28:12,321 adding 'sequana/resources/testing/test_expdesign_Hm2.csv' 2023-04-03T12:28:12,323 adding 'sequana/resources/testing/test_expdesign_generic.csv' 2023-04-03T12:28:12,325 adding 'sequana/resources/testing/test_expdesign_hiseq_duplicated_index.csv' 2023-04-03T12:28:12,328 adding 'sequana/resources/testing/test_expdesign_miseq_illumina.csv' 2023-04-03T12:28:12,331 adding 'sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv.fixed' 2023-04-03T12:28:12,333 adding 'sequana/resources/testing/test_expdesign_rubicon.csv' 2023-04-03T12:28:12,336 adding 'sequana/resources/testing/test_index_mapper.csv' 2023-04-03T12:28:12,338 adding 'sequana/resources/testing/test_kraken.out.summary' 2023-04-03T12:28:12,341 adding 'sequana/resources/testing/test_samplesheet_wrong_characters.csv' 2023-04-03T12:28:12,904 adding 'sequana/resources/testing/test_snpeff_ref.gb' 2023-04-03T12:28:12,921 adding 'sequana/resources/testing/test_taxon_rtd.csv' 2023-04-03T12:28:12,924 adding 'sequana/rules/README.rst' 2023-04-03T12:28:12,927 adding 'sequana/rules/__init__.py' 2023-04-03T12:28:12,931 adding 'sequana/rules/DupRadar/DupRadar.rules' 2023-04-03T12:28:12,933 adding 'sequana/rules/Pacbio/__init__.py' 2023-04-03T12:28:12,937 adding 'sequana/rules/SARTools/SARTools.rules' 2023-04-03T12:28:12,941 adding 'sequana/rules/SnpEff/__init__.py' 2023-04-03T12:28:12,945 adding 'sequana/rules/SnpEff/snpeff/1.0/snpeff.rules' 2023-04-03T12:28:12,948 adding 'sequana/rules/SnpEff/snpeff/1.1/snpeff.rules' 2023-04-03T12:28:12,952 adding 'sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0/snpeff_add_locus_in_fasta.rules' 2023-04-03T12:28:12,956 adding 'sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1/snpeff_add_locus_in_fasta.rules' 2023-04-03T12:28:12,959 adding 'sequana/rules/SnpEff/snpeff_create_database/snpeff_create_database.rules' 2023-04-03T12:28:12,963 adding 'sequana/rules/bamCoverage/bamCoverage.rules' 2023-04-03T12:28:12,966 adding 'sequana/rules/bam_quality_filter/bam_quality_filter.rules' 2023-04-03T12:28:12,970 adding 'sequana/rules/bed_to_gff/bed_to_gff.rules' 2023-04-03T12:28:12,973 adding 'sequana/rules/bwa_bam_to_fastq/bwa_bam_to_fastq.rules' 2023-04-03T12:28:12,976 adding 'sequana/rules/codecs/__init__.py' 2023-04-03T12:28:12,980 adding 'sequana/rules/codecs/bz2_to_dsrc/bz2_to_dsrc.rules' 2023-04-03T12:28:12,983 adding 'sequana/rules/codecs/bz2_to_fastq/bz2_to_fastq.rules' 2023-04-03T12:28:12,987 adding 'sequana/rules/codecs/dsrc_to_bz2/dsrc_to_bz2.rules' 2023-04-03T12:28:12,990 adding 'sequana/rules/codecs/dsrc_to_fastq/dsrc_to_fastq.rules' 2023-04-03T12:28:12,993 adding 'sequana/rules/codecs/fastq_to_bz2/fastq_to_bz2.rules' 2023-04-03T12:28:12,997 adding 'sequana/rules/codecs/fastq_to_dsrc/fastq_to_dsrc.rules' 2023-04-03T12:28:13,000 adding 'sequana/rules/codecs/fastq_to_gz/fastq_to_gz.rules' 2023-04-03T12:28:13,003 adding 'sequana/rules/codecs/gz_to_dsrc/gz_to_dsrc.rules' 2023-04-03T12:28:13,007 adding 'sequana/rules/codecs/gz_to_fastq/gz_to_fastq.rules' 2023-04-03T12:28:13,010 adding 'sequana/rules/codecs/vcf_to_bcf/vcf_to_bcf.rules' 2023-04-03T12:28:13,013 adding 'sequana/rules/copy_multiple_files/copy_multiple_files.rules' 2023-04-03T12:28:13,017 adding 'sequana/rules/cutadapt/cutadapt.rules' 2023-04-03T12:28:13,021 adding 'sequana/rules/dag/dag.rules' 2023-04-03T12:28:13,024 adding 'sequana/rules/deeptools/__init__.py' 2023-04-03T12:28:13,028 adding 'sequana/rules/deeptools/BamPEFragmentSize/BamPEFragmentSize.rules' 2023-04-03T12:28:13,031 adding 'sequana/rules/deeptools/multiBamSummary/multiBamSummary.rules' 2023-04-03T12:28:13,035 adding 'sequana/rules/deeptools/plotCorrelation/plotCorrelation.rules' 2023-04-03T12:28:13,038 adding 'sequana/rules/deeptools/plotCoverage/plotCoverage.rules' 2023-04-03T12:28:13,042 adding 'sequana/rules/extract_fasta_from_bed/extract_fasta_from_bed.rules' 2023-04-03T12:28:13,045 adding 'sequana/rules/fastp/fastp.rules' 2023-04-03T12:28:13,049 adding 'sequana/rules/fastq_sampling/fastq_sampling.rules' 2023-04-03T12:28:13,052 adding 'sequana/rules/fastq_screen/fastq_screen.rules' 2023-04-03T12:28:13,056 adding 'sequana/rules/fastq_screen_report/fastq_screen_report.rules' 2023-04-03T12:28:13,059 adding 'sequana/rules/fastqc/fastqc.rules' 2023-04-03T12:28:13,063 adding 'sequana/rules/format_contigs/format_contigs.rules' 2023-04-03T12:28:13,066 adding 'sequana/rules/freebayes/freebayes.rules' 2023-04-03T12:28:13,070 adding 'sequana/rules/freebayes_bcf_filter/freebayes_bcf_filter.rules' 2023-04-03T12:28:13,074 adding 'sequana/rules/freebayes_vcf_filter/freebayes_vcf_filter.rules' 2023-04-03T12:28:13,077 adding 'sequana/rules/idr/__init__.py' 2023-04-03T12:28:13,080 adding 'sequana/rules/idr/compute_idr/compute_idr.rules' 2023-04-03T12:28:13,084 adding 'sequana/rules/idr/intersectionApproach/intersectionApproach.rules' 2023-04-03T12:28:13,088 adding 'sequana/rules/idr/metrics_peaks/metrics_peaks.rules' 2023-04-03T12:28:13,092 adding 'sequana/rules/idr/preIDR_dynamic/preIDR_dynamic.rules' 2023-04-03T12:28:13,096 adding 'sequana/rules/idr/select_peaks/select_peaks.rules' 2023-04-03T12:28:13,100 adding 'sequana/rules/idr/stats_peakCalling/stats_peakCalling.rules' 2023-04-03T12:28:13,103 adding 'sequana/rules/idr/union_peaks/union_peaks.rules' 2023-04-03T12:28:13,106 adding 'sequana/rules/igvtools/igvtools.rules' 2023-04-03T12:28:13,110 adding 'sequana/rules/indel_realigner/indel_realigner.rules' 2023-04-03T12:28:13,114 adding 'sequana/rules/joint_freebayes_vcf_filter/joint_freebayes_vcf_filter.rules' 2023-04-03T12:28:13,118 adding 'sequana/rules/kraken/1.0/kraken.rules' 2023-04-03T12:28:13,122 adding 'sequana/rules/kraken/1.1/kraken.rules' 2023-04-03T12:28:13,126 adding 'sequana/rules/kraken/2.0/kraken.rules' 2023-04-03T12:28:13,130 adding 'sequana/rules/miRNA_count_dynamic/miRNA_count_dynamic.rules' 2023-04-03T12:28:13,133 adding 'sequana/rules/multiqc/multiqc.rules' 2023-04-03T12:28:13,137 adding 'sequana/rules/multiqc/2.0/multiqc.rules' 2023-04-03T12:28:13,140 adding 'sequana/rules/multiqc2/multiqc2.rules' 2023-04-03T12:28:13,144 adding 'sequana/rules/pacbio_quality/pacbio_quality.rules' 2023-04-03T12:28:13,147 adding 'sequana/rules/picard-tools/__init__.py' 2023-04-03T12:28:13,151 adding 'sequana/rules/picard-tools/CollectInsertSizeMetrics/CollectInsertSizeMetrics.rules' 2023-04-03T12:28:13,155 adding 'sequana/rules/picard-tools/add_read_group/add_read_group.rules' 2023-04-03T12:28:13,158 adding 'sequana/rules/picard-tools/create_sequence_dictionary/create_sequence_dictionary.rules' 2023-04-03T12:28:13,162 adding 'sequana/rules/picard-tools/mark_duplicates/mark_duplicates.rules' 2023-04-03T12:28:13,165 adding 'sequana/rules/picard-tools/reorderSam/reorderSam.rules' 2023-04-03T12:28:13,169 adding 'sequana/rules/prokka/prokka.rules' 2023-04-03T12:28:13,172 adding 'sequana/rules/revcomp_rule/revcomp_rule.rules' 2023-04-03T12:28:13,176 adding 'sequana/rules/rnaseqc/rnaseqc.rules' 2023-04-03T12:28:13,179 adding 'sequana/rules/rulegraph/rulegraph.rules' 2023-04-03T12:28:13,183 adding 'sequana/rules/salmon_index/salmon_index.rules' 2023-04-03T12:28:13,186 adding 'sequana/rules/salmon_mapping/salmon_mapping.rules' 2023-04-03T12:28:13,190 adding 'sequana/rules/sambamba/__init__.py' 2023-04-03T12:28:13,193 adding 'sequana/rules/sambamba/sambamba_filter/sambamba_filter.rules' 2023-04-03T12:28:13,197 adding 'sequana/rules/sambamba/sambamba_markdup/sambamba_markdup.rules' 2023-04-03T12:28:13,200 adding 'sequana/rules/samtools_depth/samtools_depth.rules' 2023-04-03T12:28:13,204 adding 'sequana/rules/samtools_sort/samtools_sort.rules' 2023-04-03T12:28:13,207 adding 'sequana/rules/spades_get_fastq/spades_get_fastq.rules' 2023-04-03T12:28:13,211 adding 'sequana/rules/spikes_counting/spikes_counting.rules' 2023-04-03T12:28:13,215 adding 'sequana/rules/summary_pipeline/summary_pipeline.rules' 2023-04-03T12:28:13,218 adding 'sequana/scripts/__init__.py' 2023-04-03T12:28:13,221 adding 'sequana/scripts/common.py' 2023-04-03T12:28:13,227 adding 'sequana/scripts/coverage.py' 2023-04-03T12:28:13,232 adding 'sequana/scripts/substractor.py' 2023-04-03T12:28:13,236 adding 'sequana/scripts/taxonomy.py' 2023-04-03T12:28:13,240 adding 'sequana/scripts/main/__init__.py' 2023-04-03T12:28:13,243 adding 'sequana/scripts/main/biomart.py' 2023-04-03T12:28:13,247 adding 'sequana/scripts/main/enrichment_kegg.py' 2023-04-03T12:28:13,251 adding 'sequana/scripts/main/enrichment_panther.py' 2023-04-03T12:28:13,255 adding 'sequana/scripts/main/enrichment_uniprot.py' 2023-04-03T12:28:13,258 adding 'sequana/scripts/main/fasta.py' 2023-04-03T12:28:13,261 adding 'sequana/scripts/main/fastq.py' 2023-04-03T12:28:13,264 adding 'sequana/scripts/main/feature_count.py' 2023-04-03T12:28:13,267 adding 'sequana/scripts/main/gff_to_gtf.py' 2023-04-03T12:28:13,270 adding 'sequana/scripts/main/gff_to_light_gff.py' 2023-04-03T12:28:13,273 adding 'sequana/scripts/main/gtf_fixer.py' 2023-04-03T12:28:13,277 adding 'sequana/scripts/main/lane_merging.py' 2023-04-03T12:28:13,280 adding 'sequana/scripts/main/main.py' 2023-04-03T12:28:13,283 adding 'sequana/scripts/main/mapping.py' 2023-04-03T12:28:13,287 adding 'sequana/scripts/main/ribodesigner.py' 2023-04-03T12:28:13,292 adding 'sequana/scripts/main/rnadiff.py' 2023-04-03T12:28:13,295 adding 'sequana/scripts/main/rnaseq_compare.py' 2023-04-03T12:28:13,298 adding 'sequana/scripts/main/salmon.py' 2023-04-03T12:28:13,301 adding 'sequana/scripts/main/samplesheet.py' 2023-04-03T12:28:13,304 adding 'sequana/scripts/main/summary.py' 2023-04-03T12:28:13,308 adding 'sequana/scripts/main/taxonomy.py' 2023-04-03T12:28:13,311 adding 'sequana/scripts/main/utils.py' 2023-04-03T12:28:13,314 adding 'sequana/scripts/main/variants_comparison.py' 2023-04-03T12:28:13,317 adding 'sequana/utils/__init__.py' 2023-04-03T12:28:13,320 adding 'sequana/utils/config.py' 2023-04-03T12:28:13,325 adding 'sequana/utils/datatables_js.py' 2023-04-03T12:28:13,329 adding 'sequana/utils/df2html.py' 2023-04-03T12:28:13,332 adding 'sequana/utils/pandas.py' 2023-04-03T12:28:13,334 adding 'sequana/utils/singleton.py' 2023-04-03T12:28:13,338 adding 'sequana/utils/tree.py' 2023-04-03T12:28:13,341 adding 'sequana/viz/__init__.py' 2023-04-03T12:28:13,344 adding 'sequana/viz/anova.py' 2023-04-03T12:28:13,347 adding 'sequana/viz/boxplot.py' 2023-04-03T12:28:13,351 adding 'sequana/viz/clusterisation.py' 2023-04-03T12:28:13,354 adding 'sequana/viz/core.py' 2023-04-03T12:28:13,360 adding 'sequana/viz/corrplot.py' 2023-04-03T12:28:13,364 adding 'sequana/viz/dendogram.py' 2023-04-03T12:28:13,371 adding 'sequana/viz/heatmap.py' 2023-04-03T12:28:13,375 adding 'sequana/viz/hinton.py' 2023-04-03T12:28:13,378 adding 'sequana/viz/hist2d.py' 2023-04-03T12:28:13,382 adding 'sequana/viz/imshow.py' 2023-04-03T12:28:13,385 adding 'sequana/viz/isomap.py' 2023-04-03T12:28:13,388 adding 'sequana/viz/linkage.py' 2023-04-03T12:28:13,391 adding 'sequana/viz/mds.py' 2023-04-03T12:28:13,394 adding 'sequana/viz/pca.py' 2023-04-03T12:28:13,398 adding 'sequana/viz/scatter.py' 2023-04-03T12:28:13,402 adding 'sequana/viz/venn.py' 2023-04-03T12:28:13,405 adding 'sequana/viz/volcano.py' 2023-04-03T12:28:13,411 adding 'sequana-0.15.0.dist-info/LICENSE' 2023-04-03T12:28:13,415 adding 'sequana-0.15.0.dist-info/METADATA' 2023-04-03T12:28:13,417 adding 'sequana-0.15.0.dist-info/WHEEL' 2023-04-03T12:28:13,419 adding 'sequana-0.15.0.dist-info/entry_points.txt' 2023-04-03T12:28:13,421 adding 'sequana-0.15.0.dist-info/top_level.txt' 2023-04-03T12:28:13,434 adding 'sequana-0.15.0.dist-info/RECORD' 2023-04-03T12:28:13,514 removing build/bdist.linux-armv7l/wheel 2023-04-03T12:28:13,927 Building wheel for sequana (setup.py): finished with status 'done' 2023-04-03T12:28:13,987 Created wheel for sequana: filename=sequana-0.15.0-py3-none-any.whl size=1785948 sha256=d2f24016a7af2c063ce68e08ddf79f30a52f2ab00730638da123215d4981e787 2023-04-03T12:28:13,989 Stored in directory: /tmp/pip-ephem-wheel-cache-8m56_luq/wheels/80/71/66/764532842205251403f5746e14c9eb644d9257badef260c780 2023-04-03T12:28:14,053 Successfully built sequana 2023-04-03T12:28:14,187 Removed build tracker: '/tmp/pip-build-tracker-y75fiqv5'