2023-04-05T07:32:35,901 Created temporary directory: /tmp/pip-ephem-wheel-cache-x4zkpv66 2023-04-05T07:32:35,904 Created temporary directory: /tmp/pip-build-tracker-cwy0vw8w 2023-04-05T07:32:35,904 Initialized build tracking at /tmp/pip-build-tracker-cwy0vw8w 2023-04-05T07:32:35,904 Created build tracker: /tmp/pip-build-tracker-cwy0vw8w 2023-04-05T07:32:35,905 Entered build tracker: /tmp/pip-build-tracker-cwy0vw8w 2023-04-05T07:32:35,905 Created temporary directory: /tmp/pip-wheel-iiyyt235 2023-04-05T07:32:35,909 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-05T07:32:35,912 Created temporary directory: /tmp/pip-ephem-wheel-cache-up398xq4 2023-04-05T07:32:35,941 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-05T07:32:35,944 2 location(s) to search for versions of funid: 2023-04-05T07:32:35,944 * https://pypi.org/simple/funid/ 2023-04-05T07:32:35,944 * https://www.piwheels.org/simple/funid/ 2023-04-05T07:32:35,945 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-04-05T07:32:35,945 Getting page https://pypi.org/simple/funid/ 2023-04-05T07:32:35,947 Found index url https://pypi.org/simple 2023-04-05T07:32:36,008 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-04-05T07:32:36,013 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-04-05T07:32:36,014 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-04-05T07:32:36,015 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-04-05T07:32:36,015 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,016 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-04-05T07:32:36,017 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,018 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-04-05T07:32:36,018 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,019 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-04-05T07:32:36,019 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,020 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-04-05T07:32:36,021 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,022 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-04-05T07:32:36,022 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-04-05T07:32:36,023 Found link https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.6.1 2023-04-05T07:32:36,024 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-04-05T07:32:36,024 Getting page https://www.piwheels.org/simple/funid/ 2023-04-05T07:32:36,025 Found index url https://www.piwheels.org/simple 2023-04-05T07:32:36,221 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-04-05T07:32:36,224 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.5-py3-none-any.whl#sha256=010daca223b2f36ea9811ebd48eb1afa57c9a0ac2f3a3f84f9b86603107db381 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,225 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,225 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,225 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,225 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-04-05T07:32:36,225 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-04-05T07:32:36,226 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-04-05T07:32:36,226 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-04-05T07:32:36,226 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-04-05T07:32:36,245 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-04-05T07:32:36,261 Collecting funid==0.3.6.1 2023-04-05T07:32:36,264 Created temporary directory: /tmp/pip-unpack-5zv4pxwk 2023-04-05T07:32:36,468 Downloading FunID-0.3.6.1.tar.gz (65.2 MB) 2023-04-05T07:33:06,668 Added funid==0.3.6.1 from https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz to build tracker '/tmp/pip-build-tracker-cwy0vw8w' 2023-04-05T07:33:06,669 Running setup.py (path:/tmp/pip-wheel-iiyyt235/funid_6d29f4032b5449c5ba086adc8fd0be5e/setup.py) egg_info for package funid 2023-04-05T07:33:06,670 Created temporary directory: /tmp/pip-pip-egg-info-6zai78ie 2023-04-05T07:33:06,670 Preparing metadata (setup.py): started 2023-04-05T07:33:06,671 Running command python setup.py egg_info 2023-04-05T07:33:07,367 {'name': 'FunID', 'version': '0.3.6.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.8', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-04-05T07:33:07,367 running egg_info 2023-04-05T07:33:07,368 creating /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info 2023-04-05T07:33:07,401 writing /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/PKG-INFO 2023-04-05T07:33:07,404 writing dependency_links to /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/dependency_links.txt 2023-04-05T07:33:07,406 writing entry points to /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/entry_points.txt 2023-04-05T07:33:07,408 writing requirements to /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/requires.txt 2023-04-05T07:33:07,409 writing top-level names to /tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/top_level.txt 2023-04-05T07:33:07,410 writing manifest file '/tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/SOURCES.txt' 2023-04-05T07:33:07,521 reading manifest file '/tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/SOURCES.txt' 2023-04-05T07:33:07,522 adding license file 'LICENSE' 2023-04-05T07:33:07,526 writing manifest file '/tmp/pip-pip-egg-info-6zai78ie/FunID.egg-info/SOURCES.txt' 2023-04-05T07:33:07,587 Preparing metadata (setup.py): finished with status 'done' 2023-04-05T07:33:07,593 Source in /tmp/pip-wheel-iiyyt235/funid_6d29f4032b5449c5ba086adc8fd0be5e has version 0.3.6.1, which satisfies requirement funid==0.3.6.1 from https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz 2023-04-05T07:33:07,594 Removed funid==0.3.6.1 from https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz from build tracker '/tmp/pip-build-tracker-cwy0vw8w' 2023-04-05T07:33:07,601 Created temporary directory: /tmp/pip-unpack-nlw26rw4 2023-04-05T07:33:07,601 Building wheels for collected packages: funid 2023-04-05T07:33:07,606 Created temporary directory: /tmp/pip-wheel-gw8_b1hb 2023-04-05T07:33:07,606 Building wheel for funid (setup.py): started 2023-04-05T07:33:07,607 Destination directory: /tmp/pip-wheel-gw8_b1hb 2023-04-05T07:33:07,607 Running command python setup.py bdist_wheel 2023-04-05T07:33:08,059 {'name': 'FunID', 'version': '0.3.6.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.8', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-04-05T07:33:08,569 running bdist_wheel 2023-04-05T07:33:08,904 running build 2023-04-05T07:33:08,905 running build_py 2023-04-05T07:33:08,943 creating build 2023-04-05T07:33:08,944 creating build/lib 2023-04-05T07:33:08,944 creating build/lib/funid 2023-04-05T07:33:08,946 copying funid/main.py -> build/lib/funid 2023-04-05T07:33:08,949 copying funid/__init__.py -> build/lib/funid 2023-04-05T07:33:08,950 copying funid/FunID_GUI.py -> build/lib/funid 2023-04-05T07:33:08,954 creating build/lib/funid/src 2023-04-05T07:33:08,955 copying funid/src/cluster.py -> build/lib/funid/src 2023-04-05T07:33:08,958 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-04-05T07:33:08,961 copying funid/src/command.py -> build/lib/funid/src 2023-04-05T07:33:08,964 copying funid/src/initialize.py -> build/lib/funid/src 2023-04-05T07:33:08,967 copying funid/src/trim.py -> build/lib/funid/src 2023-04-05T07:33:08,969 copying funid/src/ext.py -> build/lib/funid/src 2023-04-05T07:33:08,971 copying funid/src/tree.py -> build/lib/funid/src 2023-04-05T07:33:08,974 copying funid/src/concatenate.py -> build/lib/funid/src 2023-04-05T07:33:08,976 copying funid/src/logics.py -> build/lib/funid/src 2023-04-05T07:33:08,978 copying funid/src/modeltest.py -> build/lib/funid/src 2023-04-05T07:33:08,981 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-04-05T07:33:08,983 copying funid/src/save.py -> build/lib/funid/src 2023-04-05T07:33:08,986 copying funid/src/reporter.py -> build/lib/funid/src 2023-04-05T07:33:08,989 copying funid/src/manage_input.py -> build/lib/funid/src 2023-04-05T07:33:08,992 copying funid/src/__init__.py -> build/lib/funid/src 2023-04-05T07:33:08,993 copying funid/src/validate_option.py -> build/lib/funid/src 2023-04-05T07:33:08,997 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-04-05T07:33:08,999 copying funid/src/patch.py -> build/lib/funid/src 2023-04-05T07:33:09,002 copying funid/src/align.py -> build/lib/funid/src 2023-04-05T07:33:09,004 copying funid/src/tool.py -> build/lib/funid/src 2023-04-05T07:33:09,006 copying funid/src/search.py -> build/lib/funid/src 2023-04-05T07:33:09,009 copying funid/src/validation.py -> build/lib/funid/src 2023-04-05T07:33:09,011 copying funid/src/ncbi.py -> build/lib/funid/src 2023-04-05T07:33:09,013 copying funid/src/logger.py -> build/lib/funid/src 2023-04-05T07:33:09,015 copying funid/src/dataset.py -> build/lib/funid/src 2023-04-05T07:33:09,018 copying funid/src/hasher.py -> build/lib/funid/src 2023-04-05T07:33:09,020 creating build/lib/funid/data 2023-04-05T07:33:09,021 copying funid/data/__init__.py -> build/lib/funid/data 2023-04-05T07:33:09,024 running egg_info 2023-04-05T07:33:09,098 writing FunID.egg-info/PKG-INFO 2023-04-05T07:33:09,100 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-04-05T07:33:09,102 writing entry points to FunID.egg-info/entry_points.txt 2023-04-05T07:33:09,103 writing requirements to FunID.egg-info/requires.txt 2023-04-05T07:33:09,104 writing top-level names to FunID.egg-info/top_level.txt 2023-04-05T07:33:09,146 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-04-05T07:33:09,164 adding license file 'LICENSE' 2023-04-05T07:33:09,174 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-04-05T07:33:09,177 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,177 !! 2023-04-05T07:33:09,178 ############################ 2023-04-05T07:33:09,178 # Package would be ignored # 2023-04-05T07:33:09,178 ############################ 2023-04-05T07:33:09,178 Python recognizes 'funid.external' as an importable package, 2023-04-05T07:33:09,178 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,179 'funid.external' has been automatically added to the distribution only 2023-04-05T07:33:09,179 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,179 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,179 Please make sure that 'funid.external' is included as a package by using 2023-04-05T07:33:09,179 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,179 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,179 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,180 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,180 documentation page. 2023-04-05T07:33:09,180 !! 2023-04-05T07:33:09,180 check.warn(importable) 2023-04-05T07:33:09,181 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,181 !! 2023-04-05T07:33:09,181 ############################ 2023-04-05T07:33:09,181 # Package would be ignored # 2023-04-05T07:33:09,181 ############################ 2023-04-05T07:33:09,182 Python recognizes 'funid.external.BLAST_Windows' as an importable package, 2023-04-05T07:33:09,182 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,182 'funid.external.BLAST_Windows' has been automatically added to the distribution only 2023-04-05T07:33:09,182 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,182 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,182 Please make sure that 'funid.external.BLAST_Windows' is included as a package by using 2023-04-05T07:33:09,182 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,183 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,183 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,183 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,183 documentation page. 2023-04-05T07:33:09,183 !! 2023-04-05T07:33:09,184 check.warn(importable) 2023-04-05T07:33:09,184 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows.bin' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,184 !! 2023-04-05T07:33:09,184 ############################ 2023-04-05T07:33:09,184 # Package would be ignored # 2023-04-05T07:33:09,184 ############################ 2023-04-05T07:33:09,185 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package, 2023-04-05T07:33:09,185 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,185 'funid.external.BLAST_Windows.bin' has been automatically added to the distribution only 2023-04-05T07:33:09,185 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,185 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,185 Please make sure that 'funid.external.BLAST_Windows.bin' is included as a package by using 2023-04-05T07:33:09,186 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,186 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,186 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,186 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,186 documentation page. 2023-04-05T07:33:09,187 !! 2023-04-05T07:33:09,187 check.warn(importable) 2023-04-05T07:33:09,187 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.BLAST_Windows.doc' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,187 !! 2023-04-05T07:33:09,187 ############################ 2023-04-05T07:33:09,188 # Package would be ignored # 2023-04-05T07:33:09,188 ############################ 2023-04-05T07:33:09,188 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package, 2023-04-05T07:33:09,188 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,188 'funid.external.BLAST_Windows.doc' has been automatically added to the distribution only 2023-04-05T07:33:09,188 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,188 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,189 Please make sure that 'funid.external.BLAST_Windows.doc' is included as a package by using 2023-04-05T07:33:09,189 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,189 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,189 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,189 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,189 documentation page. 2023-04-05T07:33:09,190 !! 2023-04-05T07:33:09,190 check.warn(importable) 2023-04-05T07:33:09,190 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.FastTree_Windows' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,190 !! 2023-04-05T07:33:09,190 ############################ 2023-04-05T07:33:09,191 # Package would be ignored # 2023-04-05T07:33:09,191 ############################ 2023-04-05T07:33:09,191 Python recognizes 'funid.external.FastTree_Windows' as an importable package, 2023-04-05T07:33:09,191 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,191 'funid.external.FastTree_Windows' has been automatically added to the distribution only 2023-04-05T07:33:09,191 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,191 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,192 Please make sure that 'funid.external.FastTree_Windows' is included as a package by using 2023-04-05T07:33:09,192 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,192 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,192 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,192 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,192 documentation page. 2023-04-05T07:33:09,193 !! 2023-04-05T07:33:09,193 check.warn(importable) 2023-04-05T07:33:09,193 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.RAxML_Windows' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,193 !! 2023-04-05T07:33:09,193 ############################ 2023-04-05T07:33:09,194 # Package would be ignored # 2023-04-05T07:33:09,194 ############################ 2023-04-05T07:33:09,194 Python recognizes 'funid.external.RAxML_Windows' as an importable package, 2023-04-05T07:33:09,194 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,194 'funid.external.RAxML_Windows' has been automatically added to the distribution only 2023-04-05T07:33:09,194 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,194 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,195 Please make sure that 'funid.external.RAxML_Windows' is included as a package by using 2023-04-05T07:33:09,195 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,195 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,195 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,195 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,195 documentation page. 2023-04-05T07:33:09,196 !! 2023-04-05T07:33:09,196 check.warn(importable) 2023-04-05T07:33:09,196 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,196 !! 2023-04-05T07:33:09,197 ############################ 2023-04-05T07:33:09,197 # Package would be ignored # 2023-04-05T07:33:09,197 ############################ 2023-04-05T07:33:09,197 Python recognizes 'funid.external.mmseqs_Windows' as an importable package, 2023-04-05T07:33:09,197 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,197 'funid.external.mmseqs_Windows' has been automatically added to the distribution only 2023-04-05T07:33:09,197 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,197 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,198 Please make sure that 'funid.external.mmseqs_Windows' is included as a package by using 2023-04-05T07:33:09,198 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,198 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,198 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,198 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,198 documentation page. 2023-04-05T07:33:09,199 !! 2023-04-05T07:33:09,199 check.warn(importable) 2023-04-05T07:33:09,199 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.bin' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,199 !! 2023-04-05T07:33:09,199 ############################ 2023-04-05T07:33:09,200 # Package would be ignored # 2023-04-05T07:33:09,200 ############################ 2023-04-05T07:33:09,200 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package, 2023-04-05T07:33:09,200 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,200 'funid.external.mmseqs_Windows.bin' has been automatically added to the distribution only 2023-04-05T07:33:09,200 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,200 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,201 Please make sure that 'funid.external.mmseqs_Windows.bin' is included as a package by using 2023-04-05T07:33:09,201 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,201 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,201 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,201 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,201 documentation page. 2023-04-05T07:33:09,202 !! 2023-04-05T07:33:09,202 check.warn(importable) 2023-04-05T07:33:09,202 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.examples' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,202 !! 2023-04-05T07:33:09,202 ############################ 2023-04-05T07:33:09,203 # Package would be ignored # 2023-04-05T07:33:09,203 ############################ 2023-04-05T07:33:09,203 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package, 2023-04-05T07:33:09,203 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,203 'funid.external.mmseqs_Windows.examples' has been automatically added to the distribution only 2023-04-05T07:33:09,203 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,204 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,204 Please make sure that 'funid.external.mmseqs_Windows.examples' is included as a package by using 2023-04-05T07:33:09,204 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,204 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,204 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,204 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,205 documentation page. 2023-04-05T07:33:09,205 !! 2023-04-05T07:33:09,205 check.warn(importable) 2023-04-05T07:33:09,205 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.matrices' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,206 !! 2023-04-05T07:33:09,206 ############################ 2023-04-05T07:33:09,206 # Package would be ignored # 2023-04-05T07:33:09,206 ############################ 2023-04-05T07:33:09,206 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package, 2023-04-05T07:33:09,206 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,207 'funid.external.mmseqs_Windows.matrices' has been automatically added to the distribution only 2023-04-05T07:33:09,207 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,207 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,207 Please make sure that 'funid.external.mmseqs_Windows.matrices' is included as a package by using 2023-04-05T07:33:09,207 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,207 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,208 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,208 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,208 documentation page. 2023-04-05T07:33:09,208 !! 2023-04-05T07:33:09,209 check.warn(importable) 2023-04-05T07:33:09,209 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.external.mmseqs_Windows.util' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,209 !! 2023-04-05T07:33:09,209 ############################ 2023-04-05T07:33:09,209 # Package would be ignored # 2023-04-05T07:33:09,210 ############################ 2023-04-05T07:33:09,210 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package, 2023-04-05T07:33:09,210 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,210 'funid.external.mmseqs_Windows.util' has been automatically added to the distribution only 2023-04-05T07:33:09,210 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,210 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,211 Please make sure that 'funid.external.mmseqs_Windows.util' is included as a package by using 2023-04-05T07:33:09,211 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,211 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,211 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,211 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,212 documentation page. 2023-04-05T07:33:09,212 !! 2023-04-05T07:33:09,212 check.warn(importable) 2023-04-05T07:33:09,212 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,212 !! 2023-04-05T07:33:09,213 ############################ 2023-04-05T07:33:09,213 # Package would be ignored # 2023-04-05T07:33:09,213 ############################ 2023-04-05T07:33:09,213 Python recognizes 'funid.test_dataset.penicillium' as an importable package, 2023-04-05T07:33:09,213 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,214 'funid.test_dataset.penicillium' has been automatically added to the distribution only 2023-04-05T07:33:09,214 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,214 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,214 Please make sure that 'funid.test_dataset.penicillium' is included as a package by using 2023-04-05T07:33:09,214 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,214 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,215 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,215 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,215 documentation page. 2023-04-05T07:33:09,215 !! 2023-04-05T07:33:09,215 check.warn(importable) 2023-04-05T07:33:09,216 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium.DB' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,216 !! 2023-04-05T07:33:09,216 ############################ 2023-04-05T07:33:09,216 # Package would be ignored # 2023-04-05T07:33:09,216 ############################ 2023-04-05T07:33:09,216 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package, 2023-04-05T07:33:09,217 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,217 'funid.test_dataset.penicillium.DB' has been automatically added to the distribution only 2023-04-05T07:33:09,217 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,217 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,217 Please make sure that 'funid.test_dataset.penicillium.DB' is included as a package by using 2023-04-05T07:33:09,217 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,218 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,218 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,218 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,218 documentation page. 2023-04-05T07:33:09,218 !! 2023-04-05T07:33:09,219 check.warn(importable) 2023-04-05T07:33:09,219 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'funid.test_dataset.penicillium.Query' as data is deprecated, please list it in `packages`. 2023-04-05T07:33:09,219 !! 2023-04-05T07:33:09,219 ############################ 2023-04-05T07:33:09,219 # Package would be ignored # 2023-04-05T07:33:09,220 ############################ 2023-04-05T07:33:09,220 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package, 2023-04-05T07:33:09,220 but it is not listed in the `packages` configuration of setuptools. 2023-04-05T07:33:09,220 'funid.test_dataset.penicillium.Query' has been automatically added to the distribution only 2023-04-05T07:33:09,220 because it may contain data files, but this behavior is likely to change 2023-04-05T07:33:09,220 in future versions of setuptools (and therefore is considered deprecated). 2023-04-05T07:33:09,221 Please make sure that 'funid.test_dataset.penicillium.Query' is included as a package by using 2023-04-05T07:33:09,221 the `packages` configuration field or the proper discovery methods 2023-04-05T07:33:09,221 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-04-05T07:33:09,221 instead of `find_packages(...)`/`find:`). 2023-04-05T07:33:09,221 You can read more about "package discovery" and "data files" on setuptools 2023-04-05T07:33:09,221 documentation page. 2023-04-05T07:33:09,222 !! 2023-04-05T07:33:09,222 check.warn(importable) 2023-04-05T07:33:09,222 creating build/lib/funid/external 2023-04-05T07:33:09,222 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-04-05T07:33:09,222 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-04-05T07:33:09,717 copying funid/external/__init__.py -> build/lib/funid/external 2023-04-05T07:33:09,719 creating build/lib/funid/external/BLAST_Windows 2023-04-05T07:33:09,721 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-04-05T07:33:09,725 creating build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:09,726 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,066 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,069 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,072 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,075 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,323 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,328 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-04-05T07:33:10,331 creating build/lib/funid/external/BLAST_Windows/doc 2023-04-05T07:33:10,332 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-04-05T07:33:10,334 creating build/lib/funid/external/FastTree_Windows 2023-04-05T07:33:10,335 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-04-05T07:33:10,344 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-04-05T07:33:10,344 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:10,346 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:10,353 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:10,356 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:10,359 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-04-05T07:33:10,360 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-04-05T07:33:10,364 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:10,365 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:10,368 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:10,371 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:10,373 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:10,376 creating build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,377 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,380 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,382 copying funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,413 copying funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,442 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,478 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,515 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,549 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,583 copying funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,615 copying funid/external/RAxML_Windows/raxmlHPC.exe -> build/lib/funid/external/RAxML_Windows 2023-04-05T07:33:10,645 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:10,646 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:10,704 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:10,706 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:10,710 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:10,714 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:10,715 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:10,922 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:11,150 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:11,173 creating build/lib/funid/external/mmseqs_Windows 2023-04-05T07:33:11,174 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-04-05T07:33:11,178 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-04-05T07:33:11,181 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-04-05T07:33:11,184 copying funid/external/mmseqs_Windows/userguide.pdf -> build/lib/funid/external/mmseqs_Windows 2023-04-05T07:33:11,271 creating build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,272 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,288 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,293 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,297 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,304 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,345 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,421 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,425 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:11,687 creating build/lib/funid/external/mmseqs_Windows/examples 2023-04-05T07:33:11,688 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-04-05T07:33:11,697 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,698 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,700 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,702 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,704 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,706 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,709 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,711 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,713 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,715 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,717 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,719 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,721 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,723 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,726 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,728 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,730 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,732 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,735 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,737 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,739 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,741 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,743 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,745 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,747 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,750 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,752 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,754 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,757 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,759 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,762 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,764 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,766 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,769 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,771 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,773 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,776 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,778 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,780 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,783 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,785 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,788 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,790 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:11,792 creating build/lib/funid/external/mmseqs_Windows/util 2023-04-05T07:33:11,793 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-04-05T07:33:11,796 creating build/lib/funid/external/trimal.v1.2rev59 2023-04-05T07:33:11,796 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:11,797 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:11,800 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:11,802 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:11,806 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:11,808 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:11,809 copying funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:11,826 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:11,842 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,843 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,848 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,854 copying funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,858 copying funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,860 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,863 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,865 copying funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,867 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,869 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,872 copying funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,874 copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,924 copying funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:11,963 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,964 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,969 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,972 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,974 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,977 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,980 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,983 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,986 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,989 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,993 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,995 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:11,998 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,001 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,003 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,007 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,009 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,011 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,014 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,017 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,020 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,023 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,026 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,028 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-04-05T07:33:12,031 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-04-05T07:33:12,035 creating build/lib/funid/test_dataset 2023-04-05T07:33:12,035 creating build/lib/funid/test_dataset/penicillium 2023-04-05T07:33:12,036 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-04-05T07:33:12,039 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-04-05T07:33:12,041 creating build/lib/funid/test_dataset/penicillium/DB 2023-04-05T07:33:12,042 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-04-05T07:33:12,052 creating build/lib/funid/test_dataset/penicillium/Query 2023-04-05T07:33:12,053 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-04-05T07:33:12,058 creating build/lib/funid/preset 2023-04-05T07:33:12,059 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-04-05T07:33:12,062 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-04-05T07:33:12,103 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-05T07:33:12,104 warnings.warn( 2023-04-05T07:33:12,137 installing to build/bdist.linux-armv7l/wheel 2023-04-05T07:33:12,137 running install 2023-04-05T07:33:12,163 running install_lib 2023-04-05T07:33:12,198 creating build/bdist.linux-armv7l 2023-04-05T07:33:12,198 creating build/bdist.linux-armv7l/wheel 2023-04-05T07:33:12,200 creating build/bdist.linux-armv7l/wheel/funid 2023-04-05T07:33:12,201 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-04-05T07:33:12,205 creating build/bdist.linux-armv7l/wheel/funid/data 2023-04-05T07:33:12,206 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-04-05T07:33:12,209 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-04-05T07:33:12,211 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-04-05T07:33:12,215 creating build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,216 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,219 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,222 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,225 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,227 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,229 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,232 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,234 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,236 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,238 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,241 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,244 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,246 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,249 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,252 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,254 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,257 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,259 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,262 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,264 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,266 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,269 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,271 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,273 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,275 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,278 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-04-05T07:33:12,280 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-04-05T07:33:12,282 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-04-05T07:33:12,283 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-04-05T07:33:12,285 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-04-05T07:33:12,288 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-04-05T07:33:12,288 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-04-05T07:33:12,299 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-04-05T07:33:12,299 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-04-05T07:33:12,305 creating build/bdist.linux-armv7l/wheel/funid/external 2023-04-05T07:33:12,307 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,308 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,338 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,341 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,343 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,379 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,420 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,451 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,482 copying build/lib/funid/external/RAxML_Windows/raxmlHPC.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,511 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,545 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-AVX.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-04-05T07:33:12,576 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-04-05T07:33:12,577 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:12,578 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:12,580 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:12,583 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,584 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,587 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,588 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,591 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,593 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,595 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,597 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,599 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,603 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,605 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,607 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,609 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,612 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,614 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,615 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,620 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,624 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,626 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,628 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,630 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,633 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,636 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-04-05T07:33:12,640 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,641 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,644 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,646 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,650 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,678 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,680 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,731 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,733 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,735 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,737 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,739 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,743 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3 -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/dataset 2023-04-05T07:33:12,745 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:12,746 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-04-05T07:33:12,750 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:12,751 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:12,767 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-04-05T07:33:12,783 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-04-05T07:33:12,783 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-04-05T07:33:12,793 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-04-05T07:33:13,352 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-04-05T07:33:13,353 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-04-05T07:33:13,357 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,359 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,362 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,368 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,371 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,700 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,703 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,706 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-04-05T07:33:13,958 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-04-05T07:33:13,959 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-04-05T07:33:13,961 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:13,963 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:13,968 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:13,970 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:13,974 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-04-05T07:33:14,023 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:14,024 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:14,055 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:14,276 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-04-05T07:33:14,486 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-04-05T07:33:14,488 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-04-05T07:33:14,489 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-04-05T07:33:14,491 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-04-05T07:33:14,500 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-04-05T07:33:14,503 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,504 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,508 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,515 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,519 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,764 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,768 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,785 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,825 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-04-05T07:33:14,894 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-04-05T07:33:14,898 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,899 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,901 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,903 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,905 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,907 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,908 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,910 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,912 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,914 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,916 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,918 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,920 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,922 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,923 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,925 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,927 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,929 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,931 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,933 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,935 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,937 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,938 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,940 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,942 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,944 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,946 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,948 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,950 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,952 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,954 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,955 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,957 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,959 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,961 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,963 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,965 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,967 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,969 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,970 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,972 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,974 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,976 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-04-05T07:33:14,979 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-04-05T07:33:14,980 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-04-05T07:33:14,982 copying build/lib/funid/external/mmseqs_Windows/userguide.pdf -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-04-05T07:33:15,067 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-04-05T07:33:15,069 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-04-05T07:33:15,070 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:15,071 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:15,073 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:15,081 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:15,082 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:15,084 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:15,087 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:15,089 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-04-05T07:33:15,092 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-04-05T07:33:15,093 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-04-05T07:33:15,096 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-04-05T07:33:15,098 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-04-05T07:33:15,101 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-04-05T07:33:15,103 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-04-05T07:33:15,106 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-04-05T07:33:15,107 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-04-05T07:33:15,109 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-04-05T07:33:15,111 running install_egg_info 2023-04-05T07:33:15,148 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.6.1-py3.9.egg-info 2023-04-05T07:33:15,164 running install_scripts 2023-04-05T07:33:15,187 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-04-05T07:33:15,193 creating build/bdist.linux-armv7l/wheel/FunID-0.3.6.1.dist-info/WHEEL 2023-04-05T07:33:15,196 creating '/tmp/pip-wheel-gw8_b1hb/FunID-0.3.6.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-05T07:33:15,201 adding 'funid/FunID_GUI.py' 2023-04-05T07:33:15,202 adding 'funid/__init__.py' 2023-04-05T07:33:15,204 adding 'funid/main.py' 2023-04-05T07:33:15,208 adding 'funid/data/Option_manager.xlsx' 2023-04-05T07:33:15,210 adding 'funid/data/__init__.py' 2023-04-05T07:33:15,217 adding 'funid/data/genus_line.txt' 2023-04-05T07:33:15,225 adding 'funid/external/MAFFT_LICENSE' 2023-04-05T07:33:18,357 adding 'funid/external/MAFFT_Windows.zip' 2023-04-05T07:33:18,527 adding 'funid/external/__init__.py' 2023-04-05T07:33:18,536 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-04-05T07:33:21,534 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-04-05T07:33:21,641 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-04-05T07:33:21,643 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-04-05T07:33:21,648 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-04-05T07:33:23,861 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-04-05T07:33:23,961 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-04-05T07:33:23,965 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-04-05T07:33:23,968 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-04-05T07:33:24,025 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-04-05T07:33:24,066 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-04-05T07:33:24,070 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-04-05T07:33:24,071 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-04-05T07:33:24,076 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-04-05T07:33:24,079 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-04-05T07:33:24,081 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-04-05T07:33:24,083 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-04-05T07:33:24,085 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-04-05T07:33:24,092 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-04-05T07:33:24,094 adding 'funid/external/RAxML_Windows/README' 2023-04-05T07:33:24,358 adding 'funid/external/RAxML_Windows/raxmlHPC-AVX.exe' 2023-04-05T07:33:24,630 adding 'funid/external/RAxML_Windows/raxmlHPC-AVX2.exe' 2023-04-05T07:33:24,934 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX.exe' 2023-04-05T07:33:25,239 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2023-04-05T07:33:25,550 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-SSE3.exe' 2023-04-05T07:33:25,851 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS.exe' 2023-04-05T07:33:26,131 adding 'funid/external/RAxML_Windows/raxmlHPC-SSE3.exe' 2023-04-05T07:33:26,400 adding 'funid/external/RAxML_Windows/raxmlHPC.exe' 2023-04-05T07:33:26,493 adding 'funid/external/iqtree-2.1.3-Windows/example.cf' 2023-04-05T07:33:26,508 adding 'funid/external/iqtree-2.1.3-Windows/example.nex' 2023-04-05T07:33:26,521 adding 'funid/external/iqtree-2.1.3-Windows/example.phy' 2023-04-05T07:33:26,552 adding 'funid/external/iqtree-2.1.3-Windows/models.nex' 2023-04-05T07:33:28,291 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2-click.exe' 2023-04-05T07:33:30,105 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe' 2023-04-05T07:33:30,447 adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll' 2023-04-05T07:33:30,460 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2023-04-05T07:33:30,463 adding 'funid/external/mmseqs_Windows/README.md' 2023-04-05T07:33:30,464 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2023-04-05T07:33:30,982 adding 'funid/external/mmseqs_Windows/userguide.pdf' 2023-04-05T07:33:31,142 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2023-04-05T07:33:31,157 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2023-04-05T07:33:31,171 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2023-04-05T07:33:31,214 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2023-04-05T07:33:31,482 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2023-04-05T07:33:32,090 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2023-04-05T07:33:32,127 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2023-04-05T07:33:35,794 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2023-04-05T07:33:35,918 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2023-04-05T07:33:35,923 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2023-04-05T07:33:35,924 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2023-04-05T07:33:35,925 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2023-04-05T07:33:35,927 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2023-04-05T07:33:35,928 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2023-04-05T07:33:35,930 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2023-04-05T07:33:35,931 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2023-04-05T07:33:35,932 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2023-04-05T07:33:35,934 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2023-04-05T07:33:35,935 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2023-04-05T07:33:35,937 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2023-04-05T07:33:35,938 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2023-04-05T07:33:35,939 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2023-04-05T07:33:35,941 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2023-04-05T07:33:35,942 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2023-04-05T07:33:35,943 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2023-04-05T07:33:35,945 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2023-04-05T07:33:35,946 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2023-04-05T07:33:35,948 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2023-04-05T07:33:35,949 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2023-04-05T07:33:35,951 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2023-04-05T07:33:35,952 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2023-04-05T07:33:35,953 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2023-04-05T07:33:35,955 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2023-04-05T07:33:35,956 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2023-04-05T07:33:35,958 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2023-04-05T07:33:35,960 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2023-04-05T07:33:35,961 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2023-04-05T07:33:35,963 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2023-04-05T07:33:35,965 adding 'funid/external/mmseqs_Windows/matrices/blosum45.out' 2023-04-05T07:33:35,966 adding 'funid/external/mmseqs_Windows/matrices/blosum50.out' 2023-04-05T07:33:35,968 adding 'funid/external/mmseqs_Windows/matrices/blosum55.out' 2023-04-05T07:33:35,969 adding 'funid/external/mmseqs_Windows/matrices/blosum60.out' 2023-04-05T07:33:35,971 adding 'funid/external/mmseqs_Windows/matrices/blosum62.out' 2023-04-05T07:33:35,972 adding 'funid/external/mmseqs_Windows/matrices/blosum65.out' 2023-04-05T07:33:35,974 adding 'funid/external/mmseqs_Windows/matrices/blosum70.out' 2023-04-05T07:33:35,976 adding 'funid/external/mmseqs_Windows/matrices/blosum75.out' 2023-04-05T07:33:35,977 adding 'funid/external/mmseqs_Windows/matrices/blosum80.out' 2023-04-05T07:33:35,979 adding 'funid/external/mmseqs_Windows/matrices/blosum85.out' 2023-04-05T07:33:35,981 adding 'funid/external/mmseqs_Windows/matrices/blosum90.out' 2023-04-05T07:33:35,982 adding 'funid/external/mmseqs_Windows/matrices/blosum95.out' 2023-04-05T07:33:35,984 adding 'funid/external/mmseqs_Windows/matrices/nucleotide.out' 2023-04-05T07:33:35,985 adding 'funid/external/mmseqs_Windows/util/bash-completion.sh' 2023-04-05T07:33:35,988 adding 'funid/external/trimal.v1.2rev59/trimAl/AUTHORS' 2023-04-05T07:33:35,989 adding 'funid/external/trimal.v1.2rev59/trimAl/CHANGELOG' 2023-04-05T07:33:35,995 adding 'funid/external/trimal.v1.2rev59/trimAl/LICENSE' 2023-04-05T07:33:35,997 adding 'funid/external/trimal.v1.2rev59/trimAl/README' 2023-04-05T07:33:36,085 adding 'funid/external/trimal.v1.2rev59/trimAl/bin/readal.exe' 2023-04-05T07:33:36,180 adding 'funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe' 2023-04-05T07:33:36,191 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.clw' 2023-04-05T07:33:36,198 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.msl' 2023-04-05T07:33:36,204 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/YKL197C.phy2' 2023-04-05T07:33:36,206 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/blosum62.mat' 2023-04-05T07:33:36,207 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.clw' 2023-04-05T07:33:36,208 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.msl' 2023-04-05T07:33:36,210 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/example1.phy' 2023-04-05T07:33:36,211 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/fileset1' 2023-04-05T07:33:36,212 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/fileset2' 2023-04-05T07:33:36,213 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/fileset3' 2023-04-05T07:33:36,409 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment1.phy2' 2023-04-05T07:33:36,590 adding 'funid/external/trimal.v1.2rev59/trimAl/dataset/superAlignment2.phy2' 2023-04-05T07:33:36,606 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp' 2023-04-05T07:33:36,608 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.h' 2023-04-05T07:33:36,610 adding 'funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp' 2023-04-05T07:33:36,612 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp' 2023-04-05T07:33:36,613 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h' 2023-04-05T07:33:36,618 adding 'funid/external/trimal.v1.2rev59/trimAl/source/main.cpp' 2023-04-05T07:33:36,620 adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile' 2023-04-05T07:33:36,622 adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp' 2023-04-05T07:33:36,627 adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp' 2023-04-05T07:33:36,629 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp' 2023-04-05T07:33:36,630 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h' 2023-04-05T07:33:36,633 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp' 2023-04-05T07:33:36,634 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h' 2023-04-05T07:33:36,636 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp' 2023-04-05T07:33:36,638 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h' 2023-04-05T07:33:36,640 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp' 2023-04-05T07:33:36,641 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h' 2023-04-05T07:33:36,643 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp' 2023-04-05T07:33:36,645 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h' 2023-04-05T07:33:36,647 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp' 2023-04-05T07:33:36,649 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.h' 2023-04-05T07:33:36,650 adding 'funid/external/trimal.v1.2rev59/trimAl/source/values.h' 2023-04-05T07:33:36,652 adding 'funid/preset/accurate.yaml' 2023-04-05T07:33:36,653 adding 'funid/preset/fast.yaml' 2023-04-05T07:33:36,655 adding 'funid/src/__init__.py' 2023-04-05T07:33:36,657 adding 'funid/src/align.py' 2023-04-05T07:33:36,660 adding 'funid/src/cluster.py' 2023-04-05T07:33:36,662 adding 'funid/src/command.py' 2023-04-05T07:33:36,663 adding 'funid/src/concatenate.py' 2023-04-05T07:33:36,666 adding 'funid/src/dataset.py' 2023-04-05T07:33:36,668 adding 'funid/src/ext.py' 2023-04-05T07:33:36,669 adding 'funid/src/hasher.py' 2023-04-05T07:33:36,671 adding 'funid/src/initialize.py' 2023-04-05T07:33:36,672 adding 'funid/src/logger.py' 2023-04-05T07:33:36,674 adding 'funid/src/logics.py' 2023-04-05T07:33:36,677 adding 'funid/src/manage_input.py' 2023-04-05T07:33:36,679 adding 'funid/src/modeltest.py' 2023-04-05T07:33:36,681 adding 'funid/src/ncbi.py' 2023-04-05T07:33:36,682 adding 'funid/src/opt_generator.py' 2023-04-05T07:33:36,684 adding 'funid/src/patch.py' 2023-04-05T07:33:36,688 adding 'funid/src/reporter.py' 2023-04-05T07:33:36,689 adding 'funid/src/save.py' 2023-04-05T07:33:36,692 adding 'funid/src/search.py' 2023-04-05T07:33:36,693 adding 'funid/src/tool.py' 2023-04-05T07:33:36,695 adding 'funid/src/tree.py' 2023-04-05T07:33:36,700 adding 'funid/src/tree_interpretation.py' 2023-04-05T07:33:36,703 adding 'funid/src/tree_interpretation_pipe.py' 2023-04-05T07:33:36,705 adding 'funid/src/trim.py' 2023-04-05T07:33:36,710 adding 'funid/src/validate_option.py' 2023-04-05T07:33:36,712 adding 'funid/src/validation.py' 2023-04-05T07:33:36,714 adding 'funid/test_dataset/penicillium/Options.config' 2023-04-05T07:33:36,716 adding 'funid/test_dataset/penicillium/preset.yaml' 2023-04-05T07:33:36,754 adding 'funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx' 2023-04-05T07:33:36,772 adding 'funid/test_dataset/penicillium/Query/Query.xlsx' 2023-04-05T07:33:36,779 adding 'FunID-0.3.6.1.dist-info/LICENSE' 2023-04-05T07:33:36,781 adding 'FunID-0.3.6.1.dist-info/METADATA' 2023-04-05T07:33:36,782 adding 'FunID-0.3.6.1.dist-info/WHEEL' 2023-04-05T07:33:36,783 adding 'FunID-0.3.6.1.dist-info/entry_points.txt' 2023-04-05T07:33:36,784 adding 'FunID-0.3.6.1.dist-info/top_level.txt' 2023-04-05T07:33:36,787 adding 'FunID-0.3.6.1.dist-info/RECORD' 2023-04-05T07:33:36,899 removing build/bdist.linux-armv7l/wheel 2023-04-05T07:33:37,103 Building wheel for funid (setup.py): finished with status 'done' 2023-04-05T07:33:38,546 Created wheel for funid: filename=FunID-0.3.6.1-py3-none-any.whl size=65430025 sha256=9eddeab3cb03eb693bd4e1e231ab1076caa820fd6db88ef6c584b309cf87af4b 2023-04-05T07:33:38,547 Stored in directory: /tmp/pip-ephem-wheel-cache-up398xq4/wheels/87/09/e3/1e2ec1b2594d6e06b6a5d456ac8af1691c69576f741ae36140 2023-04-05T07:33:38,599 Successfully built funid 2023-04-05T07:33:40,350 Removed build tracker: '/tmp/pip-build-tracker-cwy0vw8w'