2023-04-05T07:47:31,745 Created temporary directory: /tmp/pip-ephem-wheel-cache-am19reo9 2023-04-05T07:47:31,751 Created temporary directory: /tmp/pip-build-tracker-dj0e35mx 2023-04-05T07:47:31,752 Initialized build tracking at /tmp/pip-build-tracker-dj0e35mx 2023-04-05T07:47:31,752 Created build tracker: /tmp/pip-build-tracker-dj0e35mx 2023-04-05T07:47:31,752 Entered build tracker: /tmp/pip-build-tracker-dj0e35mx 2023-04-05T07:47:31,754 Created temporary directory: /tmp/pip-wheel-llrf122f 2023-04-05T07:47:31,763 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-05T07:47:31,770 Created temporary directory: /tmp/pip-ephem-wheel-cache-7_z7p3ph 2023-04-05T07:47:31,822 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-05T07:47:31,829 2 location(s) to search for versions of kmergenetyper: 2023-04-05T07:47:31,829 * https://pypi.org/simple/kmergenetyper/ 2023-04-05T07:47:31,829 * https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T07:47:31,830 Fetching project page and analyzing links: https://pypi.org/simple/kmergenetyper/ 2023-04-05T07:47:31,831 Getting page https://pypi.org/simple/kmergenetyper/ 2023-04-05T07:47:31,834 Found index url https://pypi.org/simple 2023-04-05T07:47:32,018 Fetched page https://pypi.org/simple/kmergenetyper/ as application/vnd.pypi.simple.v1+json 2023-04-05T07:47:32,021 Found link https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.0 2023-04-05T07:47:32,022 Found link https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.1 2023-04-05T07:47:32,023 Found link https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.2 2023-04-05T07:47:32,024 Fetching project page and analyzing links: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T07:47:32,024 Getting page https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T07:47:32,026 Found index url https://www.piwheels.org/simple 2023-04-05T07:47:32,239 Fetched page https://www.piwheels.org/simple/kmergenetyper/ as text/html 2023-04-05T07:47:32,243 Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.1-py3-none-any.whl#sha256=0ac6724b8b358e46144560e2fc69d753c7ebfa34243a55477bdb59221da645dd (from https://www.piwheels.org/simple/kmergenetyper/) 2023-04-05T07:47:32,243 Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.0-py3-none-any.whl#sha256=f9349c95e0500e10963c0c41b8419305a344ceda1e21cd271ff2ac1b6e0652f6 (from https://www.piwheels.org/simple/kmergenetyper/) 2023-04-05T07:47:32,244 Skipping link: not a file: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T07:47:32,244 Skipping link: not a file: https://pypi.org/simple/kmergenetyper/ 2023-04-05T07:47:32,277 Given no hashes to check 1 links for project 'kmergenetyper': discarding no candidates 2023-04-05T07:47:32,307 Collecting kmergenetyper==1.0.2 2023-04-05T07:47:32,311 Created temporary directory: /tmp/pip-unpack-oa7domp7 2023-04-05T07:47:32,546 Downloading kmergenetyper-1.0.2.tar.gz (7.6 kB) 2023-04-05T07:47:32,630 Added kmergenetyper==1.0.2 from https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-dj0e35mx' 2023-04-05T07:47:32,632 Running setup.py (path:/tmp/pip-wheel-llrf122f/kmergenetyper_4c345f5c63f344f8816d19e84babbcc5/setup.py) egg_info for package kmergenetyper 2023-04-05T07:47:32,634 Created temporary directory: /tmp/pip-pip-egg-info-468f9kyz 2023-04-05T07:47:32,634 Preparing metadata (setup.py): started 2023-04-05T07:47:32,636 Running command python setup.py egg_info 2023-04-05T07:47:34,085 running egg_info 2023-04-05T07:47:34,094 creating /tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info 2023-04-05T07:47:34,156 writing /tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/PKG-INFO 2023-04-05T07:47:34,160 writing dependency_links to /tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/dependency_links.txt 2023-04-05T07:47:34,165 writing top-level names to /tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/top_level.txt 2023-04-05T07:47:34,168 writing manifest file '/tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T07:47:34,433 reading manifest file '/tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T07:47:34,436 adding license file 'LICENSE' 2023-04-05T07:47:34,441 writing manifest file '/tmp/pip-pip-egg-info-468f9kyz/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T07:47:34,560 Preparing metadata (setup.py): finished with status 'done' 2023-04-05T07:47:34,571 Source in /tmp/pip-wheel-llrf122f/kmergenetyper_4c345f5c63f344f8816d19e84babbcc5 has version 1.0.2, which satisfies requirement kmergenetyper==1.0.2 from https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz 2023-04-05T07:47:34,572 Removed kmergenetyper==1.0.2 from https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-dj0e35mx' 2023-04-05T07:47:34,581 Created temporary directory: /tmp/pip-unpack-axs8kccv 2023-04-05T07:47:34,582 Building wheels for collected packages: kmergenetyper 2023-04-05T07:47:34,591 Created temporary directory: /tmp/pip-wheel-_y8nyn5o 2023-04-05T07:47:34,592 Building wheel for kmergenetyper (setup.py): started 2023-04-05T07:47:34,594 Destination directory: /tmp/pip-wheel-_y8nyn5o 2023-04-05T07:47:34,594 Running command python setup.py bdist_wheel 2023-04-05T07:47:36,554 running bdist_wheel 2023-04-05T07:47:37,272 running build 2023-04-05T07:47:37,273 running build_py 2023-04-05T07:47:37,343 creating build 2023-04-05T07:47:37,344 creating build/lib 2023-04-05T07:47:37,345 creating build/lib/kmergenetyper 2023-04-05T07:47:37,348 copying kmergenetyper/realignConsensus.py -> build/lib/kmergenetyper 2023-04-05T07:47:37,352 copying kmergenetyper/version.py -> build/lib/kmergenetyper 2023-04-05T07:47:37,355 copying kmergenetyper/kma.py -> build/lib/kmergenetyper 2023-04-05T07:47:37,359 copying kmergenetyper/typeGenes.py -> build/lib/kmergenetyper 2023-04-05T07:47:37,363 copying kmergenetyper/__init__.py -> build/lib/kmergenetyper 2023-04-05T07:47:37,365 running egg_info 2023-04-05T07:47:37,514 writing kmergenetyper.egg-info/PKG-INFO 2023-04-05T07:47:37,518 writing dependency_links to kmergenetyper.egg-info/dependency_links.txt 2023-04-05T07:47:37,523 writing top-level names to kmergenetyper.egg-info/top_level.txt 2023-04-05T07:47:37,590 reading manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T07:47:37,594 adding license file 'LICENSE' 2023-04-05T07:47:37,599 writing manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T07:47:37,604 running build_scripts 2023-04-05T07:47:37,605 creating build/scripts-3.7 2023-04-05T07:47:37,607 copying and adjusting bin/kmergenetyper -> build/scripts-3.7 2023-04-05T07:47:37,609 changing mode of build/scripts-3.7/kmergenetyper from 644 to 755 2023-04-05T07:47:37,680 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-05T07:47:37,681 setuptools.SetuptoolsDeprecationWarning, 2023-04-05T07:47:37,745 installing to build/bdist.linux-armv7l/wheel 2023-04-05T07:47:37,745 running install 2023-04-05T07:47:37,807 running install_lib 2023-04-05T07:47:37,872 creating build/bdist.linux-armv7l 2023-04-05T07:47:37,873 creating build/bdist.linux-armv7l/wheel 2023-04-05T07:47:37,876 creating build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,878 copying build/lib/kmergenetyper/realignConsensus.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,882 copying build/lib/kmergenetyper/version.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,886 copying build/lib/kmergenetyper/kma.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,889 copying build/lib/kmergenetyper/typeGenes.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,893 copying build/lib/kmergenetyper/__init__.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T07:47:37,895 running install_egg_info 2023-04-05T07:47:37,969 Copying kmergenetyper.egg-info to build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2-py3.7.egg-info 2023-04-05T07:47:37,984 running install_scripts 2023-04-05T07:47:37,987 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2.data 2023-04-05T07:47:37,988 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2.data/scripts 2023-04-05T07:47:37,990 copying build/scripts-3.7/kmergenetyper -> build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2.data/scripts 2023-04-05T07:47:37,993 changing mode of build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2.data/scripts/kmergenetyper to 755 2023-04-05T07:47:38,017 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.2.dist-info/WHEEL 2023-04-05T07:47:38,022 creating '/tmp/pip-wheel-_y8nyn5o/kmergenetyper-1.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-05T07:47:38,027 adding 'kmergenetyper/__init__.py' 2023-04-05T07:47:38,030 adding 'kmergenetyper/kma.py' 2023-04-05T07:47:38,033 adding 'kmergenetyper/realignConsensus.py' 2023-04-05T07:47:38,035 adding 'kmergenetyper/typeGenes.py' 2023-04-05T07:47:38,038 adding 'kmergenetyper/version.py' 2023-04-05T07:47:38,042 adding 'kmergenetyper-1.0.2.data/scripts/kmergenetyper' 2023-04-05T07:47:38,050 adding 'kmergenetyper-1.0.2.dist-info/LICENSE' 2023-04-05T07:47:38,052 adding 'kmergenetyper-1.0.2.dist-info/METADATA' 2023-04-05T07:47:38,054 adding 'kmergenetyper-1.0.2.dist-info/WHEEL' 2023-04-05T07:47:38,056 adding 'kmergenetyper-1.0.2.dist-info/top_level.txt' 2023-04-05T07:47:38,057 adding 'kmergenetyper-1.0.2.dist-info/RECORD' 2023-04-05T07:47:38,060 removing build/bdist.linux-armv7l/wheel 2023-04-05T07:47:38,235 Building wheel for kmergenetyper (setup.py): finished with status 'done' 2023-04-05T07:47:38,242 Created wheel for kmergenetyper: filename=kmergenetyper-1.0.2-py3-none-any.whl size=8863 sha256=8647efa3afcd2812e0cddd6b46be8e62ba9cee51f8c364a62820efc5faf54b69 2023-04-05T07:47:38,245 Stored in directory: /tmp/pip-ephem-wheel-cache-7_z7p3ph/wheels/79/d7/a1/f4d79d97584c0264afe9cca3f9b5bb95a72581a298f8609479 2023-04-05T07:47:38,270 Successfully built kmergenetyper 2023-04-05T07:47:38,276 Removed build tracker: '/tmp/pip-build-tracker-dj0e35mx'