2023-04-05T08:59:18,677 Created temporary directory: /tmp/pip-ephem-wheel-cache-0v_h1x_h 2023-04-05T08:59:18,682 Created temporary directory: /tmp/pip-build-tracker-kxt2x75k 2023-04-05T08:59:18,683 Initialized build tracking at /tmp/pip-build-tracker-kxt2x75k 2023-04-05T08:59:18,684 Created build tracker: /tmp/pip-build-tracker-kxt2x75k 2023-04-05T08:59:18,684 Entered build tracker: /tmp/pip-build-tracker-kxt2x75k 2023-04-05T08:59:18,685 Created temporary directory: /tmp/pip-wheel-p9pmn9aa 2023-04-05T08:59:18,695 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-05T08:59:18,701 Created temporary directory: /tmp/pip-ephem-wheel-cache-ao14tpbu 2023-04-05T08:59:18,754 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-05T08:59:18,761 2 location(s) to search for versions of kmergenetyper: 2023-04-05T08:59:18,761 * https://pypi.org/simple/kmergenetyper/ 2023-04-05T08:59:18,761 * https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T08:59:18,762 Fetching project page and analyzing links: https://pypi.org/simple/kmergenetyper/ 2023-04-05T08:59:18,763 Getting page https://pypi.org/simple/kmergenetyper/ 2023-04-05T08:59:18,767 Found index url https://pypi.org/simple 2023-04-05T08:59:18,952 Fetched page https://pypi.org/simple/kmergenetyper/ as application/vnd.pypi.simple.v1+json 2023-04-05T08:59:18,956 Found link https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.0 2023-04-05T08:59:18,957 Found link https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.1 2023-04-05T08:59:18,958 Found link https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.2 2023-04-05T08:59:18,958 Found link https://files.pythonhosted.org/packages/05/8b/76626c85314fa93a971a8a1fd2b8b5d2e29819511dca49ae79cc1d81bf6e/kmergenetyper-1.0.3.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.3 2023-04-05T08:59:18,959 Found link https://files.pythonhosted.org/packages/43/78/c63fbd748d8a0ebe0451ec683eb39c2402c05cf366bf298b352eaaf05378/kmergenetyper-1.0.4.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.4 2023-04-05T08:59:18,960 Fetching project page and analyzing links: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T08:59:18,961 Getting page https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T08:59:18,963 Found index url https://www.piwheels.org/simple 2023-04-05T08:59:19,182 Fetched page https://www.piwheels.org/simple/kmergenetyper/ as text/html 2023-04-05T08:59:19,187 Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.2-py3-none-any.whl#sha256=8647efa3afcd2812e0cddd6b46be8e62ba9cee51f8c364a62820efc5faf54b69 (from https://www.piwheels.org/simple/kmergenetyper/) 2023-04-05T08:59:19,187 Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.1-py3-none-any.whl#sha256=0ac6724b8b358e46144560e2fc69d753c7ebfa34243a55477bdb59221da645dd (from https://www.piwheels.org/simple/kmergenetyper/) 2023-04-05T08:59:19,188 Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.0-py3-none-any.whl#sha256=f9349c95e0500e10963c0c41b8419305a344ceda1e21cd271ff2ac1b6e0652f6 (from https://www.piwheels.org/simple/kmergenetyper/) 2023-04-05T08:59:19,188 Skipping link: not a file: https://www.piwheels.org/simple/kmergenetyper/ 2023-04-05T08:59:19,189 Skipping link: not a file: https://pypi.org/simple/kmergenetyper/ 2023-04-05T08:59:19,223 Given no hashes to check 1 links for project 'kmergenetyper': discarding no candidates 2023-04-05T08:59:19,253 Collecting kmergenetyper==1.0.3 2023-04-05T08:59:19,257 Created temporary directory: /tmp/pip-unpack-5g13zp8j 2023-04-05T08:59:19,483 Downloading kmergenetyper-1.0.3.tar.gz (7.6 kB) 2023-04-05T08:59:19,567 Added kmergenetyper==1.0.3 from https://files.pythonhosted.org/packages/05/8b/76626c85314fa93a971a8a1fd2b8b5d2e29819511dca49ae79cc1d81bf6e/kmergenetyper-1.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-kxt2x75k' 2023-04-05T08:59:19,570 Running setup.py (path:/tmp/pip-wheel-p9pmn9aa/kmergenetyper_dcc3caadf98c435b8bbf174e2c281c62/setup.py) egg_info for package kmergenetyper 2023-04-05T08:59:19,571 Created temporary directory: /tmp/pip-pip-egg-info-x8qbn1yx 2023-04-05T08:59:19,572 Preparing metadata (setup.py): started 2023-04-05T08:59:19,574 Running command python setup.py egg_info 2023-04-05T08:59:21,169 running egg_info 2023-04-05T08:59:21,178 creating /tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info 2023-04-05T08:59:21,262 writing /tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/PKG-INFO 2023-04-05T08:59:21,266 writing dependency_links to /tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/dependency_links.txt 2023-04-05T08:59:21,272 writing top-level names to /tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/top_level.txt 2023-04-05T08:59:21,275 writing manifest file '/tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T08:59:21,626 reading manifest file '/tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T08:59:21,629 adding license file 'LICENSE' 2023-04-05T08:59:21,634 writing manifest file '/tmp/pip-pip-egg-info-x8qbn1yx/kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T08:59:21,752 Preparing metadata (setup.py): finished with status 'done' 2023-04-05T08:59:21,763 Source in /tmp/pip-wheel-p9pmn9aa/kmergenetyper_dcc3caadf98c435b8bbf174e2c281c62 has version 1.0.3, which satisfies requirement kmergenetyper==1.0.3 from https://files.pythonhosted.org/packages/05/8b/76626c85314fa93a971a8a1fd2b8b5d2e29819511dca49ae79cc1d81bf6e/kmergenetyper-1.0.3.tar.gz 2023-04-05T08:59:21,765 Removed kmergenetyper==1.0.3 from https://files.pythonhosted.org/packages/05/8b/76626c85314fa93a971a8a1fd2b8b5d2e29819511dca49ae79cc1d81bf6e/kmergenetyper-1.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-kxt2x75k' 2023-04-05T08:59:21,773 Created temporary directory: /tmp/pip-unpack-cwu83sej 2023-04-05T08:59:21,775 Building wheels for collected packages: kmergenetyper 2023-04-05T08:59:21,783 Created temporary directory: /tmp/pip-wheel-vtbc2_jr 2023-04-05T08:59:21,784 Building wheel for kmergenetyper (setup.py): started 2023-04-05T08:59:21,786 Destination directory: /tmp/pip-wheel-vtbc2_jr 2023-04-05T08:59:21,787 Running command python setup.py bdist_wheel 2023-04-05T08:59:23,969 running bdist_wheel 2023-04-05T08:59:24,795 running build 2023-04-05T08:59:24,796 running build_py 2023-04-05T08:59:24,893 creating build 2023-04-05T08:59:24,894 creating build/lib 2023-04-05T08:59:24,895 creating build/lib/kmergenetyper 2023-04-05T08:59:24,898 copying kmergenetyper/typeGenes.py -> build/lib/kmergenetyper 2023-04-05T08:59:24,902 copying kmergenetyper/__init__.py -> build/lib/kmergenetyper 2023-04-05T08:59:24,905 copying kmergenetyper/version.py -> build/lib/kmergenetyper 2023-04-05T08:59:24,909 copying kmergenetyper/realignConsensus.py -> build/lib/kmergenetyper 2023-04-05T08:59:24,913 copying kmergenetyper/kma.py -> build/lib/kmergenetyper 2023-04-05T08:59:24,916 running egg_info 2023-04-05T08:59:25,110 writing kmergenetyper.egg-info/PKG-INFO 2023-04-05T08:59:25,114 writing dependency_links to kmergenetyper.egg-info/dependency_links.txt 2023-04-05T08:59:25,119 writing top-level names to kmergenetyper.egg-info/top_level.txt 2023-04-05T08:59:25,210 reading manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T08:59:25,214 adding license file 'LICENSE' 2023-04-05T08:59:25,219 writing manifest file 'kmergenetyper.egg-info/SOURCES.txt' 2023-04-05T08:59:25,224 running build_scripts 2023-04-05T08:59:25,225 creating build/scripts-3.7 2023-04-05T08:59:25,227 copying and adjusting bin/kmergenetyper -> build/scripts-3.7 2023-04-05T08:59:25,230 changing mode of build/scripts-3.7/kmergenetyper from 644 to 755 2023-04-05T08:59:25,323 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-05T08:59:25,324 setuptools.SetuptoolsDeprecationWarning, 2023-04-05T08:59:25,410 installing to build/bdist.linux-armv7l/wheel 2023-04-05T08:59:25,411 running install 2023-04-05T08:59:25,472 running install_lib 2023-04-05T08:59:25,562 creating build/bdist.linux-armv7l 2023-04-05T08:59:25,563 creating build/bdist.linux-armv7l/wheel 2023-04-05T08:59:25,567 creating build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,569 copying build/lib/kmergenetyper/typeGenes.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,573 copying build/lib/kmergenetyper/__init__.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,576 copying build/lib/kmergenetyper/version.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,580 copying build/lib/kmergenetyper/realignConsensus.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,584 copying build/lib/kmergenetyper/kma.py -> build/bdist.linux-armv7l/wheel/kmergenetyper 2023-04-05T08:59:25,588 running install_egg_info 2023-04-05T08:59:25,686 Copying kmergenetyper.egg-info to build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3-py3.7.egg-info 2023-04-05T08:59:25,704 running install_scripts 2023-04-05T08:59:25,707 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3.data 2023-04-05T08:59:25,708 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3.data/scripts 2023-04-05T08:59:25,710 copying build/scripts-3.7/kmergenetyper -> build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3.data/scripts 2023-04-05T08:59:25,714 changing mode of build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3.data/scripts/kmergenetyper to 755 2023-04-05T08:59:25,740 creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.3.dist-info/WHEEL 2023-04-05T08:59:25,745 creating '/tmp/pip-wheel-vtbc2_jr/kmergenetyper-1.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-05T08:59:25,750 adding 'kmergenetyper/__init__.py' 2023-04-05T08:59:25,753 adding 'kmergenetyper/kma.py' 2023-04-05T08:59:25,756 adding 'kmergenetyper/realignConsensus.py' 2023-04-05T08:59:25,759 adding 'kmergenetyper/typeGenes.py' 2023-04-05T08:59:25,761 adding 'kmergenetyper/version.py' 2023-04-05T08:59:25,766 adding 'kmergenetyper-1.0.3.data/scripts/kmergenetyper' 2023-04-05T08:59:25,773 adding 'kmergenetyper-1.0.3.dist-info/LICENSE' 2023-04-05T08:59:25,776 adding 'kmergenetyper-1.0.3.dist-info/METADATA' 2023-04-05T08:59:25,778 adding 'kmergenetyper-1.0.3.dist-info/WHEEL' 2023-04-05T08:59:25,780 adding 'kmergenetyper-1.0.3.dist-info/top_level.txt' 2023-04-05T08:59:25,782 adding 'kmergenetyper-1.0.3.dist-info/RECORD' 2023-04-05T08:59:25,784 removing build/bdist.linux-armv7l/wheel 2023-04-05T08:59:25,962 Building wheel for kmergenetyper (setup.py): finished with status 'done' 2023-04-05T08:59:25,969 Created wheel for kmergenetyper: filename=kmergenetyper-1.0.3-py3-none-any.whl size=8935 sha256=4da0dc59a822ade5f5437e73b699edf2efd0c1ced5911496db506d0f99f8c6fc 2023-04-05T08:59:25,971 Stored in directory: /tmp/pip-ephem-wheel-cache-ao14tpbu/wheels/f0/ce/50/4f23dae76d5b9489c061954ff0712587ee6933311022038eb1 2023-04-05T08:59:25,998 Successfully built kmergenetyper 2023-04-05T08:59:26,004 Removed build tracker: '/tmp/pip-build-tracker-kxt2x75k'