2023-04-07T15:12:35,520 Created temporary directory: /tmp/pip-ephem-wheel-cache-kki3q04p
2023-04-07T15:12:35,525 Created temporary directory: /tmp/pip-build-tracker-2ll7ek07
2023-04-07T15:12:35,526 Initialized build tracking at /tmp/pip-build-tracker-2ll7ek07
2023-04-07T15:12:35,526 Created build tracker: /tmp/pip-build-tracker-2ll7ek07
2023-04-07T15:12:35,527 Entered build tracker: /tmp/pip-build-tracker-2ll7ek07
2023-04-07T15:12:35,528 Created temporary directory: /tmp/pip-wheel-qowjcx4w
2023-04-07T15:12:35,538 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-04-07T15:12:35,544 Created temporary directory: /tmp/pip-ephem-wheel-cache-t_180n7w
2023-04-07T15:12:35,604 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-04-07T15:12:35,611 2 location(s) to search for versions of papyrus-scripts:
2023-04-07T15:12:35,611 * https://pypi.org/simple/papyrus-scripts/
2023-04-07T15:12:35,611 * https://www.piwheels.org/simple/papyrus-scripts/
2023-04-07T15:12:35,612 Fetching project page and analyzing links: https://pypi.org/simple/papyrus-scripts/
2023-04-07T15:12:35,613 Getting page https://pypi.org/simple/papyrus-scripts/
2023-04-07T15:12:35,616 Found index url https://pypi.org/simple
2023-04-07T15:12:35,800 Fetched page https://pypi.org/simple/papyrus-scripts/ as application/vnd.pypi.simple.v1+json
2023-04-07T15:12:35,803   Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/b5/19/95564c6182f53424b98a9b226fad2732a775e1b03240f98026d1f4a31c09/papyrus_scripts-1.0.0-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/)
2023-04-07T15:12:35,804   Found link https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.0
2023-04-07T15:12:35,805   Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/40/cb/13f41607756a77e4cd805fa9b08a8bc3ee15e5db1a8c072793d70b9af909/papyrus_scripts-1.0.1-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/)
2023-04-07T15:12:35,805   Found link https://files.pythonhosted.org/packages/9e/74/fbeebe2236ef7fac6e618ef9340b1d0bd356968d8035d4e4c8d3518b2aef/papyrus_scripts-1.0.1.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.1
2023-04-07T15:12:35,806 Fetching project page and analyzing links: https://www.piwheels.org/simple/papyrus-scripts/
2023-04-07T15:12:35,807 Getting page https://www.piwheels.org/simple/papyrus-scripts/
2023-04-07T15:12:35,809 Found index url https://www.piwheels.org/simple
2023-04-07T15:12:36,020 Fetched page https://www.piwheels.org/simple/papyrus-scripts/ as text/html
2023-04-07T15:12:36,022   Skipping link: No binaries permitted for papyrus-scripts: https://www.piwheels.org/simple/papyrus-scripts/papyrus_scripts-1.0.0-py3-none-any.whl#sha256=0547595805abc574ec34f214d521dcf762c43e1c7da898f1bb95a2c6eda24460 (from https://www.piwheels.org/simple/papyrus-scripts/)
2023-04-07T15:12:36,023 Skipping link: not a file: https://www.piwheels.org/simple/papyrus-scripts/
2023-04-07T15:12:36,023 Skipping link: not a file: https://pypi.org/simple/papyrus-scripts/
2023-04-07T15:12:36,056 Given no hashes to check 1 links for project 'papyrus-scripts': discarding no candidates
2023-04-07T15:12:36,086 Collecting papyrus-scripts==1.0.1
2023-04-07T15:12:36,090   Created temporary directory: /tmp/pip-unpack-xkja64ki
2023-04-07T15:12:36,373   Downloading papyrus_scripts-1.0.1.tar.gz (68 kB)
2023-04-07T15:12:36,585   Added papyrus-scripts==1.0.1 from https://files.pythonhosted.org/packages/9e/74/fbeebe2236ef7fac6e618ef9340b1d0bd356968d8035d4e4c8d3518b2aef/papyrus_scripts-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-2ll7ek07'
2023-04-07T15:12:36,588   Running setup.py (path:/tmp/pip-wheel-qowjcx4w/papyrus-scripts_a8ef8272f2204e7ea44c261561e55f5d/setup.py) egg_info for package papyrus-scripts
2023-04-07T15:12:36,589   Created temporary directory: /tmp/pip-pip-egg-info-p_pzfnx8
2023-04-07T15:12:36,590   Preparing metadata (setup.py): started
2023-04-07T15:12:36,592   Running command python setup.py egg_info
2023-04-07T15:12:38,372   running egg_info
2023-04-07T15:12:38,376   creating /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info
2023-04-07T15:12:38,445   writing /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/PKG-INFO
2023-04-07T15:12:38,450   writing dependency_links to /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/dependency_links.txt
2023-04-07T15:12:38,455   writing entry points to /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/entry_points.txt
2023-04-07T15:12:38,458   writing requirements to /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/requires.txt
2023-04-07T15:12:38,460   writing top-level names to /tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/top_level.txt
2023-04-07T15:12:38,463   writing manifest file '/tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/SOURCES.txt'
2023-04-07T15:12:38,684   reading manifest file '/tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/SOURCES.txt'
2023-04-07T15:12:38,687   adding license file 'LICENSE'
2023-04-07T15:12:38,694   writing manifest file '/tmp/pip-pip-egg-info-p_pzfnx8/papyrus_scripts.egg-info/SOURCES.txt'
2023-04-07T15:12:38,696   /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead.
2023-04-07T15:12:38,696     warnings.warn(msg, warning_class)
2023-04-07T15:12:38,813   Preparing metadata (setup.py): finished with status 'done'
2023-04-07T15:12:38,828   Source in /tmp/pip-wheel-qowjcx4w/papyrus-scripts_a8ef8272f2204e7ea44c261561e55f5d has version 1.0.1, which satisfies requirement papyrus-scripts==1.0.1 from https://files.pythonhosted.org/packages/9e/74/fbeebe2236ef7fac6e618ef9340b1d0bd356968d8035d4e4c8d3518b2aef/papyrus_scripts-1.0.1.tar.gz
2023-04-07T15:12:38,830   Removed papyrus-scripts==1.0.1 from https://files.pythonhosted.org/packages/9e/74/fbeebe2236ef7fac6e618ef9340b1d0bd356968d8035d4e4c8d3518b2aef/papyrus_scripts-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-2ll7ek07'
2023-04-07T15:12:38,841 Created temporary directory: /tmp/pip-unpack-3rwj2bpt
2023-04-07T15:12:38,843 Building wheels for collected packages: papyrus-scripts
2023-04-07T15:12:38,852   Created temporary directory: /tmp/pip-wheel-156ipvfb
2023-04-07T15:12:38,853   Building wheel for papyrus-scripts (setup.py): started
2023-04-07T15:12:38,855   Destination directory: /tmp/pip-wheel-156ipvfb
2023-04-07T15:12:38,855   Running command python setup.py bdist_wheel
2023-04-07T15:12:40,180   /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:520: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead.
2023-04-07T15:12:40,182     warnings.warn(msg, warning_class)
2023-04-07T15:12:41,203   running bdist_wheel
2023-04-07T15:12:41,425   running build
2023-04-07T15:12:41,426   running build_py
2023-04-07T15:12:41,502   creating build
2023-04-07T15:12:41,503   creating build/lib
2023-04-07T15:12:41,504   creating build/lib/papyrus_scripts
2023-04-07T15:12:41,507   copying src/papyrus_scripts/version.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,511   copying src/papyrus_scripts/preprocess.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,518   copying src/papyrus_scripts/__init__.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,521   copying src/papyrus_scripts/subsim_search.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,529   copying src/papyrus_scripts/cli.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,534   copying src/papyrus_scripts/reader.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,540   copying src/papyrus_scripts/modelling.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,548   copying src/papyrus_scripts/neuralnet.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,553   copying src/papyrus_scripts/__main__.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,557   copying src/papyrus_scripts/fingerprint.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,562   copying src/papyrus_scripts/matchRCSB.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,566   copying src/papyrus_scripts/download.py -> build/lib/papyrus_scripts
2023-04-07T15:12:41,573   creating build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,575   copying src/papyrus_scripts/utils/UniprotMatch.py -> build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,580   copying src/papyrus_scripts/utils/__init__.py -> build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,583   copying src/papyrus_scripts/utils/mol_reader.py -> build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,588   copying src/papyrus_scripts/utils/IO.py -> build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,592   running egg_info
2023-04-07T15:12:41,755   writing src/papyrus_scripts.egg-info/PKG-INFO
2023-04-07T15:12:41,760   writing dependency_links to src/papyrus_scripts.egg-info/dependency_links.txt
2023-04-07T15:12:41,765   writing entry points to src/papyrus_scripts.egg-info/entry_points.txt
2023-04-07T15:12:41,769   writing requirements to src/papyrus_scripts.egg-info/requires.txt
2023-04-07T15:12:41,771   writing top-level names to src/papyrus_scripts.egg-info/top_level.txt
2023-04-07T15:12:41,850   reading manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt'
2023-04-07T15:12:41,855   adding license file 'LICENSE'
2023-04-07T15:12:41,862   writing manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt'
2023-04-07T15:12:41,869   copying src/papyrus_scripts/utils/links.json -> build/lib/papyrus_scripts/utils
2023-04-07T15:12:41,953   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2023-04-07T15:12:41,954     setuptools.SetuptoolsDeprecationWarning,
2023-04-07T15:12:42,023   installing to build/bdist.linux-armv7l/wheel
2023-04-07T15:12:42,024   running install
2023-04-07T15:12:42,085   running install_lib
2023-04-07T15:12:42,160   creating build/bdist.linux-armv7l
2023-04-07T15:12:42,161   creating build/bdist.linux-armv7l/wheel
2023-04-07T15:12:42,165   creating build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,167   copying build/lib/papyrus_scripts/version.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,171   copying build/lib/papyrus_scripts/preprocess.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,180   creating build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,182   copying build/lib/papyrus_scripts/utils/UniprotMatch.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,187   copying build/lib/papyrus_scripts/utils/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,190   copying build/lib/papyrus_scripts/utils/mol_reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,195   copying build/lib/papyrus_scripts/utils/IO.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,200   copying build/lib/papyrus_scripts/utils/links.json -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils
2023-04-07T15:12:42,205   copying build/lib/papyrus_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,209   copying build/lib/papyrus_scripts/subsim_search.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,217   copying build/lib/papyrus_scripts/cli.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,223   copying build/lib/papyrus_scripts/reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,228   copying build/lib/papyrus_scripts/modelling.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,235   copying build/lib/papyrus_scripts/neuralnet.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,240   copying build/lib/papyrus_scripts/__main__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,244   copying build/lib/papyrus_scripts/fingerprint.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,248   copying build/lib/papyrus_scripts/matchRCSB.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,252   copying build/lib/papyrus_scripts/download.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts
2023-04-07T15:12:42,257   running install_egg_info
2023-04-07T15:12:42,337   Copying src/papyrus_scripts.egg-info to build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.1-py3.7.egg-info
2023-04-07T15:12:42,360   running install_scripts
2023-04-07T15:12:42,420   creating build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.1.dist-info/WHEEL
2023-04-07T15:12:42,425   creating '/tmp/pip-wheel-156ipvfb/papyrus_scripts-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-04-07T15:12:42,430   adding 'papyrus_scripts/__init__.py'
2023-04-07T15:12:42,433   adding 'papyrus_scripts/__main__.py'
2023-04-07T15:12:42,440   adding 'papyrus_scripts/cli.py'
2023-04-07T15:12:42,445   adding 'papyrus_scripts/download.py'
2023-04-07T15:12:42,449   adding 'papyrus_scripts/fingerprint.py'
2023-04-07T15:12:42,454   adding 'papyrus_scripts/matchRCSB.py'
2023-04-07T15:12:42,467   adding 'papyrus_scripts/modelling.py'
2023-04-07T15:12:42,475   adding 'papyrus_scripts/neuralnet.py'
2023-04-07T15:12:42,485   adding 'papyrus_scripts/preprocess.py'
2023-04-07T15:12:42,491   adding 'papyrus_scripts/reader.py'
2023-04-07T15:12:42,504   adding 'papyrus_scripts/subsim_search.py'
2023-04-07T15:12:42,507   adding 'papyrus_scripts/version.py'
2023-04-07T15:12:42,513   adding 'papyrus_scripts/utils/IO.py'
2023-04-07T15:12:42,518   adding 'papyrus_scripts/utils/UniprotMatch.py'
2023-04-07T15:12:42,520   adding 'papyrus_scripts/utils/__init__.py'
2023-04-07T15:12:42,525   adding 'papyrus_scripts/utils/links.json'
2023-04-07T15:12:42,530   adding 'papyrus_scripts/utils/mol_reader.py'
2023-04-07T15:12:42,535   adding 'papyrus_scripts-1.0.1.dist-info/LICENSE'
2023-04-07T15:12:42,539   adding 'papyrus_scripts-1.0.1.dist-info/METADATA'
2023-04-07T15:12:42,541   adding 'papyrus_scripts-1.0.1.dist-info/WHEEL'
2023-04-07T15:12:42,543   adding 'papyrus_scripts-1.0.1.dist-info/entry_points.txt'
2023-04-07T15:12:42,545   adding 'papyrus_scripts-1.0.1.dist-info/top_level.txt'
2023-04-07T15:12:42,546   adding 'papyrus_scripts-1.0.1.dist-info/RECORD'
2023-04-07T15:12:42,552   removing build/bdist.linux-armv7l/wheel
2023-04-07T15:12:42,714   Building wheel for papyrus-scripts (setup.py): finished with status 'done'
2023-04-07T15:12:42,723   Created wheel for papyrus-scripts: filename=papyrus_scripts-1.0.1-py3-none-any.whl size=71689 sha256=a9a05d11a4dab2af708d68a7d80f14bde89175c2655db1d624fecddf5e188e07
2023-04-07T15:12:42,725   Stored in directory: /tmp/pip-ephem-wheel-cache-t_180n7w/wheels/ba/d3/ae/2455dafc9eaf471a6ca2c7be69acac92028a64bea1d9b92724
2023-04-07T15:12:42,755 Successfully built papyrus-scripts
2023-04-07T15:12:42,768 Removed build tracker: '/tmp/pip-build-tracker-2ll7ek07'