2023-04-14T10:10:36,058 Created temporary directory: /tmp/pip-ephem-wheel-cache-obroq__1 2023-04-14T10:10:36,063 Created temporary directory: /tmp/pip-build-tracker-k0_xalxg 2023-04-14T10:10:36,064 Initialized build tracking at /tmp/pip-build-tracker-k0_xalxg 2023-04-14T10:10:36,064 Created build tracker: /tmp/pip-build-tracker-k0_xalxg 2023-04-14T10:10:36,065 Entered build tracker: /tmp/pip-build-tracker-k0_xalxg 2023-04-14T10:10:36,066 Created temporary directory: /tmp/pip-wheel-0ktbpqj4 2023-04-14T10:10:36,076 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-14T10:10:36,082 Created temporary directory: /tmp/pip-ephem-wheel-cache-vn1oo5dq 2023-04-14T10:10:36,136 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-14T10:10:36,144 2 location(s) to search for versions of damona: 2023-04-14T10:10:36,144 * https://pypi.org/simple/damona/ 2023-04-14T10:10:36,144 * https://www.piwheels.org/simple/damona/ 2023-04-14T10:10:36,145 Fetching project page and analyzing links: https://pypi.org/simple/damona/ 2023-04-14T10:10:36,146 Getting page https://pypi.org/simple/damona/ 2023-04-14T10:10:36,149 Found index url https://pypi.org/simple 2023-04-14T10:10:36,348 Fetched page https://pypi.org/simple/damona/ as application/vnd.pypi.simple.v1+json 2023-04-14T10:10:36,361 Found link https://files.pythonhosted.org/packages/cd/9e/27ac1c5e27caa58f2d161dff75c5c4cdd92670440b07e7709802a9459b9c/damona-0.1.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.1.0 2023-04-14T10:10:36,362 Found link https://files.pythonhosted.org/packages/c9/20/7fe4d2f1c34300ed845a3b033a8cd8b3de72b82a25599330b10e2317ca48/damona-0.1.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.1.1 2023-04-14T10:10:36,362 Found link https://files.pythonhosted.org/packages/36/9b/153b2e8849b6cf3b78ac13c3e30fbd4f1774c31b7b34cb849eb3a14bf69c/damona-0.2.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.0 2023-04-14T10:10:36,363 Found link https://files.pythonhosted.org/packages/5d/85/e936fbc729383625e399b7dabd3238995c915084986ec573588855c921ee/damona-0.2.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.1 2023-04-14T10:10:36,364 Found link https://files.pythonhosted.org/packages/d8/72/c819e18fd5dcf8abe904e97240b4adb023e80b73a311ca4cddd0f8b6509c/damona-0.2.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.2.2 2023-04-14T10:10:36,364 Found link https://files.pythonhosted.org/packages/2a/2f/3eca4d23aad1c0df2a1f708f49fd68de86b47fb3ff0b7270182074adbe24/damona-0.3.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.3.0 2023-04-14T10:10:36,365 Found link https://files.pythonhosted.org/packages/a4/85/cf3ba30aadaf7e322c200ff61874eb24a3ded6d64ad308d15760d26338f1/damona-0.3.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.3.1 2023-04-14T10:10:36,366 Found link https://files.pythonhosted.org/packages/c2/ef/1a8417b608f9a1f46749cea5ef2cd0bef0e2e9449182baa65ef403b9bd6e/damona-0.4.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.0 2023-04-14T10:10:36,366 Found link https://files.pythonhosted.org/packages/66/87/cc314bac96ca0afc29e95d91a07d70c56df5c37cb4209f8bfc4eb959418a/damona-0.4.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.1 2023-04-14T10:10:36,367 Found link https://files.pythonhosted.org/packages/50/5a/2b91d89732ad7eabd61d2060de0ecc94c4a04c25999f199d2cb93ff943e5/damona-0.4.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.2 2023-04-14T10:10:36,368 Found link https://files.pythonhosted.org/packages/e5/d8/0d4fe942e4a6dd2b5a45ac16a038f99dbea115dde61c41aec5f2815ef2a6/damona-0.4.3.tar.gz (from https://pypi.org/simple/damona/), version: 0.4.3 2023-04-14T10:10:36,369 Found link https://files.pythonhosted.org/packages/9e/e0/d085c328e8cc39ca40e2176f3c5c5ffeb66e1271abeeb36f863c5acb8bc1/damona-0.5.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.0 2023-04-14T10:10:36,369 Found link https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.1 2023-04-14T10:10:36,370 Found link https://files.pythonhosted.org/packages/09/b4/f0570169435b2629cac80df83e3140b82a480cdfd795f8f6c54c4c36d53e/damona-0.5.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.2 2023-04-14T10:10:36,371 Found link https://files.pythonhosted.org/packages/34/85/cce2fff4d9e5c90ac7dc665db03e0c134fd23930d6fe7168e3fd48a7899a/damona-0.5.3.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.3 2023-04-14T10:10:36,371 Found link https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.4 2023-04-14T10:10:36,372 Found link https://files.pythonhosted.org/packages/c0/d8/0edd345b42fb10ec5615463a6362c71abbf7182ae0a64a366586a752924a/damona-0.5.5.tar.gz (from https://pypi.org/simple/damona/), version: 0.5.5 2023-04-14T10:10:36,373 Found link https://files.pythonhosted.org/packages/21/64/ec1a9f94d2727191a6b09dddbf464cb190a1c94a7016f5b7d0db7c6ab65a/damona-0.6.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.6.0 2023-04-14T10:10:36,373 Found link https://files.pythonhosted.org/packages/02/98/e4f8fb789585c125ad574845a8f43b6996b97979995cf77f088b6e166a57/damona-0.7.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.7.0 2023-04-14T10:10:36,374 Found link https://files.pythonhosted.org/packages/3d/af/463f5754f4f79152d2ca30c232f95364848b6eccc4e8da0bcd039797c13f/damona-0.7.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.7.1 2023-04-14T10:10:36,375 Found link https://files.pythonhosted.org/packages/b3/e4/7c0cb559030b0a10ef0b8b0e89778fee71357d01c681ff3a8e31633f139f/damona-0.8.0.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.0 2023-04-14T10:10:36,375 Found link https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.1 2023-04-14T10:10:36,376 Found link https://files.pythonhosted.org/packages/b9/71/804fbd1dafb4f7a2789494ce99f747050496509ba9c7b4ab750c2a1d15cc/damona-0.8.2.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.2 2023-04-14T10:10:36,377 Found link https://files.pythonhosted.org/packages/74/c1/7e180bf7870c0ab1a09a753eec3dab56a3ab1537d33dc20e4a3862834654/damona-0.8.3.tar.gz (from https://pypi.org/simple/damona/), version: 0.8.3 2023-04-14T10:10:36,378 Fetching project page and analyzing links: https://www.piwheels.org/simple/damona/ 2023-04-14T10:10:36,378 Getting page https://www.piwheels.org/simple/damona/ 2023-04-14T10:10:36,381 Found index url https://www.piwheels.org/simple 2023-04-14T10:10:36,614 Fetched page https://www.piwheels.org/simple/damona/ as text/html 2023-04-14T10:10:36,630 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.2-py3-none-any.whl#sha256=cb1d248f7ca0e043cca2bb9abbe636b6dfc45f4c9dee9ab49505e014ab23cd84 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,630 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.1-py3-none-any.whl#sha256=1876dc816c6b55bdd4e26c3d55f550985eaaece2dd0b51e91198fcb9e23a6bce (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,631 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.0-py3-none-any.whl#sha256=2e21d72a65141ba9d76a6971a8d8c1618964ddc7b0e126ea8282260b974c3b65 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,632 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.1-py3-none-any.whl#sha256=5e66c86b9d54bddb8e202de5271f8eee2126fee535b1d9907ff06574405c9ee5 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,632 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.0-py3-none-any.whl#sha256=5042f04e5365017dbee446034c186e0e74a6e10e69b97159d4e7583d6eb978b8 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,633 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.6.0-py3-none-any.whl#sha256=0c08f84a6315a8a73a113852e981e28107e73b00ea14400876449661d4f4f5ff (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,633 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.5-py3-none-any.whl#sha256=250ccf2df08abd139089d4fb2e79006e5bd203c3a0a52f44d1f9284a73f0d925 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,634 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.4-py3-none-any.whl#sha256=d6be5e498a49e3228ff56e0445cf57642d10bfb8a523b4f6839f5998051feb50 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,634 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.3-py3-none-any.whl#sha256=c4e616966557b5bdf1adb7658f29a695e17d0f74b00c292ec912da0a37907ba8 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,635 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.2-py3-none-any.whl#sha256=96b9d98f2692a8ed1bd3d044f9cbd041d99762fcc2003f9e4c657e7bb885a061 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,635 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.1-py3-none-any.whl#sha256=5a3fb6b370b13c5085238e60671c083d51b2afa8ca94314f8c382b46b4fecc0a (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,636 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.0-py3-none-any.whl#sha256=2b105c2097bf8572e7d57f7b842123852413d4d1266886b21d4f1e94b0d25109 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,636 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.3-py3-none-any.whl#sha256=7b05aa70e5bb4664074b7b3d9b63873f9aa72e29217bf7a971614685c338107e (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,637 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.2-py3-none-any.whl#sha256=326ee5f5e021f463128cc57ff6f3ff6129f46271dfaf4f823a5645f2e94d7aa4 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,637 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.1-py3-none-any.whl#sha256=87fafcd2a349a2c12e3f28edb48015a402a3e50f89c4da8072167483d0d7a200 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,638 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.0-py3-none-any.whl#sha256=131eb91e5a14664d9a717ad2a12025787ed02a761336318d57de6076bbfe0695 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,638 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.1-py3-none-any.whl#sha256=934799d1cf5a920bc199416dc79952e268359cc4ad20d561571fd85e4c2d84dc (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,639 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.0-py3-none-any.whl#sha256=b9bad2b5e81d6bdca4b895a2d7dfcd19a5450509889904d9840f447a3a5a5f11 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,639 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.2.2-py3-none-any.whl#sha256=9165891e105689e76d95ddf46067837a1ee8b13d1d3af36b5af846c1b8ee4b92 (from https://www.piwheels.org/simple/damona/) 2023-04-14T10:10:36,640 Skipping link: not a file: https://www.piwheels.org/simple/damona/ 2023-04-14T10:10:36,641 Skipping link: not a file: https://pypi.org/simple/damona/ 2023-04-14T10:10:36,682 Given no hashes to check 1 links for project 'damona': discarding no candidates 2023-04-14T10:10:36,712 Collecting damona==0.8.3 2023-04-14T10:10:36,717 Created temporary directory: /tmp/pip-unpack-_ofbz6sy 2023-04-14T10:10:37,078 Downloading damona-0.8.3.tar.gz (458 kB) 2023-04-14T10:10:38,398 Added damona==0.8.3 from https://files.pythonhosted.org/packages/74/c1/7e180bf7870c0ab1a09a753eec3dab56a3ab1537d33dc20e4a3862834654/damona-0.8.3.tar.gz to build tracker '/tmp/pip-build-tracker-k0_xalxg' 2023-04-14T10:10:38,401 Running setup.py (path:/tmp/pip-wheel-0ktbpqj4/damona_a183b54d6e6c4cd69a0537331ae2ed88/setup.py) egg_info for package damona 2023-04-14T10:10:38,402 Created temporary directory: /tmp/pip-pip-egg-info-aybp1iks 2023-04-14T10:10:38,402 Preparing metadata (setup.py): started 2023-04-14T10:10:38,405 Running command python setup.py egg_info 2023-04-14T10:10:40,931 running egg_info 2023-04-14T10:10:40,933 creating /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info 2023-04-14T10:10:41,024 writing /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/PKG-INFO 2023-04-14T10:10:41,031 writing dependency_links to /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/dependency_links.txt 2023-04-14T10:10:41,035 writing entry points to /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/entry_points.txt 2023-04-14T10:10:41,039 writing requirements to /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/requires.txt 2023-04-14T10:10:41,042 writing top-level names to /tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/top_level.txt 2023-04-14T10:10:41,045 writing manifest file '/tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/SOURCES.txt' 2023-04-14T10:10:41,474 reading manifest file '/tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/SOURCES.txt' 2023-04-14T10:10:41,479 reading manifest template 'MANIFEST.in' 2023-04-14T10:10:41,483 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-04-14T10:10:41,486 warning: no previously-included files matching '*pyc' found under directory '*' 2023-04-14T10:10:41,488 warning: no previously-included files matching 'test' found under directory '*' 2023-04-14T10:10:41,493 warning: no files found matching '.requirements_dev.txt' 2023-04-14T10:10:41,496 no previously-included directories found matching 'test' 2023-04-14T10:10:41,498 no previously-included directories found matching 'doc' 2023-04-14T10:10:41,499 adding license file 'LICENSE' 2023-04-14T10:10:41,520 writing manifest file '/tmp/pip-pip-egg-info-aybp1iks/damona.egg-info/SOURCES.txt' 2023-04-14T10:10:41,681 Preparing metadata (setup.py): finished with status 'done' 2023-04-14T10:10:41,699 Source in /tmp/pip-wheel-0ktbpqj4/damona_a183b54d6e6c4cd69a0537331ae2ed88 has version 0.8.3, which satisfies requirement damona==0.8.3 from https://files.pythonhosted.org/packages/74/c1/7e180bf7870c0ab1a09a753eec3dab56a3ab1537d33dc20e4a3862834654/damona-0.8.3.tar.gz 2023-04-14T10:10:41,701 Removed damona==0.8.3 from https://files.pythonhosted.org/packages/74/c1/7e180bf7870c0ab1a09a753eec3dab56a3ab1537d33dc20e4a3862834654/damona-0.8.3.tar.gz from build tracker '/tmp/pip-build-tracker-k0_xalxg' 2023-04-14T10:10:41,715 Created temporary directory: /tmp/pip-unpack-1m5qqibf 2023-04-14T10:10:41,716 Building wheels for collected packages: damona 2023-04-14T10:10:41,726 Created temporary directory: /tmp/pip-wheel-6td_2fv0 2023-04-14T10:10:41,727 Building wheel for damona (setup.py): started 2023-04-14T10:10:41,729 Destination directory: /tmp/pip-wheel-6td_2fv0 2023-04-14T10:10:41,729 Running command python setup.py bdist_wheel 2023-04-14T10:10:44,288 running bdist_wheel 2023-04-14T10:10:44,558 running build 2023-04-14T10:10:44,559 running build_py 2023-04-14T10:10:44,658 creating build 2023-04-14T10:10:44,659 creating build/lib 2023-04-14T10:10:44,660 creating build/lib/damona 2023-04-14T10:10:44,663 copying damona/config.py -> build/lib/damona 2023-04-14T10:10:44,667 copying damona/registry.py -> build/lib/damona 2023-04-14T10:10:44,672 copying damona/environ.py -> build/lib/damona 2023-04-14T10:10:44,677 copying damona/common.py -> build/lib/damona 2023-04-14T10:10:44,682 copying damona/install.py -> build/lib/damona 2023-04-14T10:10:44,687 copying damona/__init__.py -> build/lib/damona 2023-04-14T10:10:44,691 copying damona/zenodo.py -> build/lib/damona 2023-04-14T10:10:44,696 copying damona/script.py -> build/lib/damona 2023-04-14T10:10:44,701 copying damona/builders.py -> build/lib/damona 2023-04-14T10:10:44,706 copying damona/admin.py -> build/lib/damona 2023-04-14T10:10:44,710 creating build/lib/damona/shell 2023-04-14T10:10:44,712 copying damona/shell/__init__.py -> build/lib/damona/shell 2023-04-14T10:10:44,716 creating build/lib/damona/papers 2023-04-14T10:10:44,717 copying damona/papers/__init__.py -> build/lib/damona/papers 2023-04-14T10:10:44,722 creating build/lib/damona/biocontainers 2023-04-14T10:10:44,723 copying damona/biocontainers/__init__.py -> build/lib/damona/biocontainers 2023-04-14T10:10:44,727 creating build/lib/damona/library 2023-04-14T10:10:44,729 copying damona/library/__init__.py -> build/lib/damona/library 2023-04-14T10:10:44,733 creating build/lib/damona/software 2023-04-14T10:10:44,735 copying damona/software/__init__.py -> build/lib/damona/software 2023-04-14T10:10:44,740 creating build/lib/damona/shell/bash 2023-04-14T10:10:44,741 copying damona/shell/bash/__init__.py -> build/lib/damona/shell/bash 2023-04-14T10:10:44,833 creating build/lib/damona/shell/fish 2023-04-14T10:10:44,835 copying damona/shell/fish/damona.fish -> build/lib/damona/shell/fish 2023-04-14T10:10:44,839 copying damona/shell/bash/damona.sh -> build/lib/damona/shell/bash 2023-04-14T10:10:44,845 copying damona/biocontainers/registry.yaml -> build/lib/damona/biocontainers 2023-04-14T10:10:44,994 creating build/lib/damona/library/rust 2023-04-14T10:10:44,995 copying damona/library/rust/Singularity.rust -> build/lib/damona/library/rust 2023-04-14T10:10:45,000 creating build/lib/damona/library/ubuntu 2023-04-14T10:10:45,001 copying damona/library/ubuntu/Singularity.ubuntu_16.04 -> build/lib/damona/library/ubuntu 2023-04-14T10:10:45,005 copying damona/library/ubuntu/Singularity.ubuntu_18.04 -> build/lib/damona/library/ubuntu 2023-04-14T10:10:45,009 creating build/lib/damona/library/R 2023-04-14T10:10:45,011 copying damona/library/R/Singularity.R_3.6.3 -> build/lib/damona/library/R 2023-04-14T10:10:45,015 copying damona/library/R/Singularity.R_4.0.2 -> build/lib/damona/library/R 2023-04-14T10:10:45,019 creating build/lib/damona/library/conda 2023-04-14T10:10:45,021 copying damona/library/conda/Singularity.conda_4.7.12 -> build/lib/damona/library/conda 2023-04-14T10:10:45,025 copying damona/library/conda/Singularity.conda_4.9.2 -> build/lib/damona/library/conda 2023-04-14T10:10:45,029 copying damona/library/ubuntu/registry.yaml -> build/lib/damona/library/ubuntu 2023-04-14T10:10:45,033 copying damona/library/R/registry.yaml -> build/lib/damona/library/R 2023-04-14T10:10:45,037 copying damona/library/conda/registry.yaml -> build/lib/damona/library/conda 2023-04-14T10:10:45,041 creating build/lib/damona/software/shustring 2023-04-14T10:10:45,043 copying damona/software/shustring/Singularity.shustring_2.6.0 -> build/lib/damona/software/shustring 2023-04-14T10:10:45,047 creating build/lib/damona/software/gffread 2023-04-14T10:10:45,048 copying damona/software/gffread/Singularity.gffread_0.12.1 -> build/lib/damona/software/gffread 2023-04-14T10:10:45,052 creating build/lib/damona/software/rnadiff 2023-04-14T10:10:45,054 copying damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/lib/damona/software/rnadiff 2023-04-14T10:10:45,058 creating build/lib/damona/software/seqkit 2023-04-14T10:10:45,060 copying damona/software/seqkit/Singularity.seqkit_2.4.0 -> build/lib/damona/software/seqkit 2023-04-14T10:10:45,064 copying damona/software/seqkit/Singularity.seqkit_2.1.0 -> build/lib/damona/software/seqkit 2023-04-14T10:10:45,068 creating build/lib/damona/software/picard 2023-04-14T10:10:45,070 copying damona/software/picard/Singularity.picard_2.26 -> build/lib/damona/software/picard 2023-04-14T10:10:45,074 creating build/lib/damona/software/fastp 2023-04-14T10:10:45,076 copying damona/software/fastp/Singularity.fastp_0.23.2 -> build/lib/damona/software/fastp 2023-04-14T10:10:45,080 creating build/lib/damona/software/prokka 2023-04-14T10:10:45,082 copying damona/software/prokka/Singularity.prokka_1.14.5 -> build/lib/damona/software/prokka 2023-04-14T10:10:45,086 creating build/lib/damona/software/pbbam 2023-04-14T10:10:45,087 copying damona/software/pbbam/Singularity.pbbam_2.1.0 -> build/lib/damona/software/pbbam 2023-04-14T10:10:45,091 copying damona/software/pbbam/Singularity.pbbam_2.3.0 -> build/lib/damona/software/pbbam 2023-04-14T10:10:45,095 creating build/lib/damona/software/bowtie 2023-04-14T10:10:45,097 copying damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/lib/damona/software/bowtie 2023-04-14T10:10:45,101 creating build/lib/damona/software/bedtools 2023-04-14T10:10:45,103 copying damona/software/bedtools/Singularity.bedtools_2.30.0 -> build/lib/damona/software/bedtools 2023-04-14T10:10:45,107 creating build/lib/damona/software/rnaseqc 2023-04-14T10:10:45,108 copying damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/lib/damona/software/rnaseqc 2023-04-14T10:10:45,113 creating build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,114 copying damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,119 copying damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,123 copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.2 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,127 copying damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,131 copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.3 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,135 copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.6 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,139 copying damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,143 copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.1 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,147 copying damona/software/sequana_tools/Singularity.sequana_tools_0.14.5 -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,151 creating build/lib/damona/software/sequana_perl_tools 2023-04-14T10:10:45,152 copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/lib/damona/software/sequana_perl_tools 2023-04-14T10:10:45,156 copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/lib/damona/software/sequana_perl_tools 2023-04-14T10:10:45,160 copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.3.0 -> build/lib/damona/software/sequana_perl_tools 2023-04-14T10:10:45,165 creating build/lib/damona/software/bioconvert 2023-04-14T10:10:45,166 copying damona/software/bioconvert/Singularity.bioconvert_1.0.0 -> build/lib/damona/software/bioconvert 2023-04-14T10:10:45,171 copying damona/software/bioconvert/Singularity.bioconvert_0.6.3 -> build/lib/damona/software/bioconvert 2023-04-14T10:10:45,174 copying damona/software/bioconvert/Singularity.bioconvert_0.6.1 -> build/lib/damona/software/bioconvert 2023-04-14T10:10:45,179 copying damona/software/bioconvert/Singularity.bioconvert_0.6.2 -> build/lib/damona/software/bioconvert 2023-04-14T10:10:45,183 creating build/lib/damona/software/trf 2023-04-14T10:10:45,184 copying damona/software/trf/Singularity.trf_4.10.0 -> build/lib/damona/software/trf 2023-04-14T10:10:45,189 creating build/lib/damona/software/flye 2023-04-14T10:10:45,190 copying damona/software/flye/Singularity.flye_2.9.1 -> build/lib/damona/software/flye 2023-04-14T10:10:45,194 copying damona/software/flye/Singularity.flye_2.9.0 -> build/lib/damona/software/flye 2023-04-14T10:10:45,198 creating build/lib/damona/software/busco 2023-04-14T10:10:45,200 copying damona/software/busco/Singularity.busco_5.4.6 -> build/lib/damona/software/busco 2023-04-14T10:10:45,204 creating build/lib/damona/software/samtools 2023-04-14T10:10:45,206 copying damona/software/samtools/Singularity.samtools_1.15.0 -> build/lib/damona/software/samtools 2023-04-14T10:10:45,210 copying damona/software/samtools/Singularity.samtools_1.16.1 -> build/lib/damona/software/samtools 2023-04-14T10:10:45,214 creating build/lib/damona/software/sequana_denovo 2023-04-14T10:10:45,216 copying damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2 -> build/lib/damona/software/sequana_denovo 2023-04-14T10:10:45,220 creating build/lib/damona/software/circlator 2023-04-14T10:10:45,222 copying damona/software/circlator/Singularity.circlator_1.5.5 -> build/lib/damona/software/circlator 2023-04-14T10:10:45,226 creating build/lib/damona/software/pycoqc 2023-04-14T10:10:45,228 copying damona/software/pycoqc/Singularity.pycoqc_2.5.2 -> build/lib/damona/software/pycoqc 2023-04-14T10:10:45,232 creating build/lib/damona/software/sequana 2023-04-14T10:10:45,234 copying damona/software/sequana/Singularity.sequana_0.14.6 -> build/lib/damona/software/sequana 2023-04-14T10:10:45,238 copying damona/software/sequana/Singularity.sequana_0.12.6 -> build/lib/damona/software/sequana 2023-04-14T10:10:45,242 creating build/lib/damona/software/rtools 2023-04-14T10:10:45,243 copying damona/software/rtools/Singularity.rtools_1.0.0 -> build/lib/damona/software/rtools 2023-04-14T10:10:45,248 copying damona/software/rtools/Singularity.rtools_1.1.0 -> build/lib/damona/software/rtools 2023-04-14T10:10:45,252 copying damona/software/rtools/Singularity.rtools_1.2.0 -> build/lib/damona/software/rtools 2023-04-14T10:10:45,256 creating build/lib/damona/software/gzip 2023-04-14T10:10:45,258 copying damona/software/gzip/Singularity.gzip_1.9.0 -> build/lib/damona/software/gzip 2023-04-14T10:10:45,262 creating build/lib/damona/software/seqtk 2023-04-14T10:10:45,264 copying damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/lib/damona/software/seqtk 2023-04-14T10:10:45,268 creating build/lib/damona/software/samtools_minimap2 2023-04-14T10:10:45,270 copying damona/software/samtools_minimap2/Singularity.samtools_1.17_minimap2_2.24.0 -> build/lib/damona/software/samtools_minimap2 2023-04-14T10:10:45,274 creating build/lib/damona/software/ccs 2023-04-14T10:10:45,276 copying damona/software/ccs/Singularity.ccs_6.4.0 -> build/lib/damona/software/ccs 2023-04-14T10:10:45,280 creating build/lib/damona/software/idr 2023-04-14T10:10:45,282 copying damona/software/idr/Singularity.idr_2.0.3 -> build/lib/damona/software/idr 2023-04-14T10:10:45,286 creating build/lib/damona/software/sequana_ribofinder 2023-04-14T10:10:45,288 copying damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0 -> build/lib/damona/software/sequana_ribofinder 2023-04-14T10:10:45,293 creating build/lib/damona/software/bamtools 2023-04-14T10:10:45,294 copying damona/software/bamtools/Singularity.bamtools_2.5.2 -> build/lib/damona/software/bamtools 2023-04-14T10:10:45,299 creating build/lib/damona/software/kraken 2023-04-14T10:10:45,301 copying damona/software/kraken/Singularity.kraken_2.0.9 -> build/lib/damona/software/kraken 2023-04-14T10:10:45,305 copying damona/software/kraken/Singularity.kraken_1.1.0 -> build/lib/damona/software/kraken 2023-04-14T10:10:45,309 creating build/lib/damona/software/snpeff 2023-04-14T10:10:45,311 copying damona/software/snpeff/Singularity.snpeff_5.1.0 -> build/lib/damona/software/snpeff 2023-04-14T10:10:45,315 creating build/lib/damona/software/minimap2 2023-04-14T10:10:45,317 copying damona/software/minimap2/Singularity.minimap2_2.24.0 -> build/lib/damona/software/minimap2 2023-04-14T10:10:45,321 copying damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/lib/damona/software/minimap2 2023-04-14T10:10:45,325 copying damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/lib/damona/software/minimap2 2023-04-14T10:10:45,329 creating build/lib/damona/software/homer 2023-04-14T10:10:45,331 copying damona/software/homer/Singularity.homer_4.11.0 -> build/lib/damona/software/homer 2023-04-14T10:10:45,335 creating build/lib/damona/software/art 2023-04-14T10:10:45,337 copying damona/software/art/Singularity.art_2.5.8 -> build/lib/damona/software/art 2023-04-14T10:10:45,341 copying damona/software/art/Singularity.art_3.11.14 -> build/lib/damona/software/art 2023-04-14T10:10:45,345 creating build/lib/damona/software/bcl2fastq 2023-04-14T10:10:45,347 copying damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/lib/damona/software/bcl2fastq 2023-04-14T10:10:45,351 creating build/lib/damona/software/graphviz 2023-04-14T10:10:45,353 copying damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/lib/damona/software/graphviz 2023-04-14T10:10:45,357 creating build/lib/damona/software/polypolish 2023-04-14T10:10:45,359 copying damona/software/polypolish/Singularity.polypolish_0.5.0 -> build/lib/damona/software/polypolish 2023-04-14T10:10:45,363 creating build/lib/damona/software/ucsc 2023-04-14T10:10:45,365 copying damona/software/ucsc/Singularity.ucsc_3.7.7 -> build/lib/damona/software/ucsc 2023-04-14T10:10:45,369 creating build/lib/damona/software/mergegi 2023-04-14T10:10:45,371 copying damona/software/mergegi/Singularity.mergegi_0.0.1 -> build/lib/damona/software/mergegi 2023-04-14T10:10:45,375 creating build/lib/damona/software/phantompeakqualtools 2023-04-14T10:10:45,377 copying damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/lib/damona/software/phantompeakqualtools 2023-04-14T10:10:45,382 creating build/lib/damona/software/igvtools 2023-04-14T10:10:45,383 copying damona/software/igvtools/Singularity.igvtools_2.12.0 -> build/lib/damona/software/igvtools 2023-04-14T10:10:45,388 creating build/lib/damona/software/falco 2023-04-14T10:10:45,390 copying damona/software/falco/Singularity.falco_1.0.0 -> build/lib/damona/software/falco 2023-04-14T10:10:45,394 copying damona/software/falco/Singularity.falco_0.2.1 -> build/lib/damona/software/falco 2023-04-14T10:10:45,399 creating build/lib/damona/software/fastqc 2023-04-14T10:10:45,400 copying damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/lib/damona/software/fastqc 2023-04-14T10:10:45,404 copying damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/lib/damona/software/fastqc 2023-04-14T10:10:45,408 copying damona/software/fastqc/Singularity.fastqc_0.11.9_py3 -> build/lib/damona/software/fastqc 2023-04-14T10:10:45,413 creating build/lib/damona/software/canu 2023-04-14T10:10:45,414 copying damona/software/canu/Singularity.canu_2.1.1 -> build/lib/damona/software/canu 2023-04-14T10:10:45,419 copying damona/software/canu/Singularity.canu_1.6.0 -> build/lib/damona/software/canu 2023-04-14T10:10:45,423 copying damona/software/canu/Singularity.canu_1.8.0 -> build/lib/damona/software/canu 2023-04-14T10:10:45,427 creating build/lib/damona/software/bwa 2023-04-14T10:10:45,428 copying damona/software/bwa/Singularity.bwa_0.7.17 -> build/lib/damona/software/bwa 2023-04-14T10:10:45,433 creating build/lib/damona/software/bowtie2 2023-04-14T10:10:45,434 copying damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/lib/damona/software/bowtie2 2023-04-14T10:10:45,439 copying damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/lib/damona/software/bowtie2 2023-04-14T10:10:45,443 creating build/lib/damona/software/salmon 2023-04-14T10:10:45,445 copying damona/software/salmon/Singularity.salmon_1.3.0 -> build/lib/damona/software/salmon 2023-04-14T10:10:45,449 creating build/lib/damona/software/hifiasm 2023-04-14T10:10:45,451 copying damona/software/hifiasm/Singularity.hifiasm_0.19.1 -> build/lib/damona/software/hifiasm 2023-04-14T10:10:45,455 creating build/lib/damona/software/pigz 2023-04-14T10:10:45,457 copying damona/software/pigz/Singularity.pigz_2.4.0 -> build/lib/damona/software/pigz 2023-04-14T10:10:45,461 creating build/lib/damona/software/quast 2023-04-14T10:10:45,463 copying damona/software/quast/Singularity.quast_5.0.2 -> build/lib/damona/software/quast 2023-04-14T10:10:45,467 creating build/lib/damona/software/bbtools 2023-04-14T10:10:45,469 copying damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/lib/damona/software/bbtools 2023-04-14T10:10:45,473 creating build/lib/damona/software/RIPseeker 2023-04-14T10:10:45,475 copying damona/software/RIPseeker/Singularity.RIPseeker_1.0.0 -> build/lib/damona/software/RIPseeker 2023-04-14T10:10:45,479 copying damona/software/shustring/registry.yaml -> build/lib/damona/software/shustring 2023-04-14T10:10:45,483 copying damona/software/gffread/registry.yaml -> build/lib/damona/software/gffread 2023-04-14T10:10:45,488 copying damona/software/rnadiff/registry.yaml -> build/lib/damona/software/rnadiff 2023-04-14T10:10:45,492 copying damona/software/seqkit/registry.yaml -> build/lib/damona/software/seqkit 2023-04-14T10:10:45,496 copying damona/software/fastp/registry.yaml -> build/lib/damona/software/fastp 2023-04-14T10:10:45,500 copying damona/software/prokka/registry.yaml -> build/lib/damona/software/prokka 2023-04-14T10:10:45,504 copying damona/software/pbbam/registry.yaml -> build/lib/damona/software/pbbam 2023-04-14T10:10:45,508 copying damona/software/bowtie/registry.yaml -> build/lib/damona/software/bowtie 2023-04-14T10:10:45,512 copying damona/software/bedtools/registry.yaml -> build/lib/damona/software/bedtools 2023-04-14T10:10:45,516 copying damona/software/rnaseqc/registry.yaml -> build/lib/damona/software/rnaseqc 2023-04-14T10:10:45,520 copying damona/software/sequana_tools/registry.yaml -> build/lib/damona/software/sequana_tools 2023-04-14T10:10:45,525 copying damona/software/sequana_perl_tools/registry.yaml -> build/lib/damona/software/sequana_perl_tools 2023-04-14T10:10:45,529 copying damona/software/bioconvert/registry.yaml -> build/lib/damona/software/bioconvert 2023-04-14T10:10:45,533 copying damona/software/trf/registry.yaml -> build/lib/damona/software/trf 2023-04-14T10:10:45,537 copying damona/software/flye/registry.yaml -> build/lib/damona/software/flye 2023-04-14T10:10:45,542 copying damona/software/busco/registry.yaml -> build/lib/damona/software/busco 2023-04-14T10:10:45,546 copying damona/software/samtools/registry.yaml -> build/lib/damona/software/samtools 2023-04-14T10:10:45,550 copying damona/software/sequana_denovo/registry.yaml -> build/lib/damona/software/sequana_denovo 2023-04-14T10:10:45,554 copying damona/software/circlator/registry.yaml -> build/lib/damona/software/circlator 2023-04-14T10:10:45,558 copying damona/software/pycoqc/registry.yaml -> build/lib/damona/software/pycoqc 2023-04-14T10:10:45,562 copying damona/software/sequana/registry.yaml -> build/lib/damona/software/sequana 2023-04-14T10:10:45,566 copying damona/software/rtools/registry.yaml -> build/lib/damona/software/rtools 2023-04-14T10:10:45,571 copying damona/software/gzip/registry.yaml -> build/lib/damona/software/gzip 2023-04-14T10:10:45,575 copying damona/software/seqtk/registry.yaml -> build/lib/damona/software/seqtk 2023-04-14T10:10:45,579 copying damona/software/samtools_minimap2/registry.yaml -> build/lib/damona/software/samtools_minimap2 2023-04-14T10:10:45,583 copying damona/software/ccs/registry.yaml -> build/lib/damona/software/ccs 2023-04-14T10:10:45,587 copying damona/software/idr/registry.yaml -> build/lib/damona/software/idr 2023-04-14T10:10:45,592 creating build/lib/damona/software/hisat2 2023-04-14T10:10:45,593 copying damona/software/hisat2/registry.yaml -> build/lib/damona/software/hisat2 2023-04-14T10:10:45,598 copying damona/software/sequana_ribofinder/registry.yaml -> build/lib/damona/software/sequana_ribofinder 2023-04-14T10:10:45,602 copying damona/software/bamtools/registry.yaml -> build/lib/damona/software/bamtools 2023-04-14T10:10:45,606 copying damona/software/kraken/registry.yaml -> build/lib/damona/software/kraken 2023-04-14T10:10:45,610 copying damona/software/minimap2/registry.yaml -> build/lib/damona/software/minimap2 2023-04-14T10:10:45,614 copying damona/software/homer/registry.yaml -> build/lib/damona/software/homer 2023-04-14T10:10:45,618 copying damona/software/art/registry.yaml -> build/lib/damona/software/art 2023-04-14T10:10:45,622 copying damona/software/bcl2fastq/registry.yaml -> build/lib/damona/software/bcl2fastq 2023-04-14T10:10:45,626 copying damona/software/graphviz/registry.yaml -> build/lib/damona/software/graphviz 2023-04-14T10:10:45,630 copying damona/software/polypolish/registry.yaml -> build/lib/damona/software/polypolish 2023-04-14T10:10:45,634 copying damona/software/ucsc/registry.yaml -> build/lib/damona/software/ucsc 2023-04-14T10:10:45,638 copying damona/software/mergegi/registry.yaml -> build/lib/damona/software/mergegi 2023-04-14T10:10:45,642 copying damona/software/phantompeakqualtools/registry.yaml -> build/lib/damona/software/phantompeakqualtools 2023-04-14T10:10:45,646 copying damona/software/igvtools/registry.yaml -> build/lib/damona/software/igvtools 2023-04-14T10:10:45,650 copying damona/software/falco/registry.yaml -> build/lib/damona/software/falco 2023-04-14T10:10:45,654 copying damona/software/fastqc/registry.yaml -> build/lib/damona/software/fastqc 2023-04-14T10:10:45,658 copying damona/software/canu/registry.yaml -> build/lib/damona/software/canu 2023-04-14T10:10:45,662 copying damona/software/bwa/registry.yaml -> build/lib/damona/software/bwa 2023-04-14T10:10:45,666 copying damona/software/bowtie2/registry.yaml -> build/lib/damona/software/bowtie2 2023-04-14T10:10:45,670 copying damona/software/salmon/registry.yaml -> build/lib/damona/software/salmon 2023-04-14T10:10:45,674 copying damona/software/hifiasm/registry.yaml -> build/lib/damona/software/hifiasm 2023-04-14T10:10:45,678 copying damona/software/pigz/registry.yaml -> build/lib/damona/software/pigz 2023-04-14T10:10:45,682 copying damona/software/quast/registry.yaml -> build/lib/damona/software/quast 2023-04-14T10:10:45,686 copying damona/software/bbtools/registry.yaml -> build/lib/damona/software/bbtools 2023-04-14T10:10:45,691 copying damona/software/RIPseeker/registry.yaml -> build/lib/damona/software/RIPseeker 2023-04-14T10:10:45,704 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-04-14T10:10:45,705 setuptools.SetuptoolsDeprecationWarning, 2023-04-14T10:10:45,801 installing to build/bdist.linux-armv7l/wheel 2023-04-14T10:10:45,802 running install 2023-04-14T10:10:45,861 running install_lib 2023-04-14T10:10:45,959 creating build/bdist.linux-armv7l 2023-04-14T10:10:45,960 creating build/bdist.linux-armv7l/wheel 2023-04-14T10:10:45,963 creating build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,965 copying build/lib/damona/config.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,970 copying build/lib/damona/registry.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,974 copying build/lib/damona/environ.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,979 copying build/lib/damona/common.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,984 copying build/lib/damona/install.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:45,990 creating build/bdist.linux-armv7l/wheel/damona/shell 2023-04-14T10:10:45,993 creating build/bdist.linux-armv7l/wheel/damona/shell/fish 2023-04-14T10:10:45,995 copying build/lib/damona/shell/fish/damona.fish -> build/bdist.linux-armv7l/wheel/damona/shell/fish 2023-04-14T10:10:46,000 creating build/bdist.linux-armv7l/wheel/damona/shell/bash 2023-04-14T10:10:46,002 copying build/lib/damona/shell/bash/damona.sh -> build/bdist.linux-armv7l/wheel/damona/shell/bash 2023-04-14T10:10:46,006 copying build/lib/damona/shell/bash/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell/bash 2023-04-14T10:10:46,009 copying build/lib/damona/shell/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell 2023-04-14T10:10:46,013 creating build/bdist.linux-armv7l/wheel/damona/papers 2023-04-14T10:10:46,014 copying build/lib/damona/papers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/papers 2023-04-14T10:10:46,019 creating build/bdist.linux-armv7l/wheel/damona/biocontainers 2023-04-14T10:10:46,020 copying build/lib/damona/biocontainers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/biocontainers 2023-04-14T10:10:46,023 copying build/lib/damona/biocontainers/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/biocontainers 2023-04-14T10:10:46,205 creating build/bdist.linux-armv7l/wheel/damona/library 2023-04-14T10:10:46,207 creating build/bdist.linux-armv7l/wheel/damona/library/rust 2023-04-14T10:10:46,210 copying build/lib/damona/library/rust/Singularity.rust -> build/bdist.linux-armv7l/wheel/damona/library/rust 2023-04-14T10:10:46,217 creating build/bdist.linux-armv7l/wheel/damona/library/ubuntu 2023-04-14T10:10:46,220 copying build/lib/damona/library/ubuntu/Singularity.ubuntu_16.04 -> build/bdist.linux-armv7l/wheel/damona/library/ubuntu 2023-04-14T10:10:46,226 copying build/lib/damona/library/ubuntu/Singularity.ubuntu_18.04 -> build/bdist.linux-armv7l/wheel/damona/library/ubuntu 2023-04-14T10:10:46,230 copying build/lib/damona/library/ubuntu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/ubuntu 2023-04-14T10:10:46,235 creating build/bdist.linux-armv7l/wheel/damona/library/R 2023-04-14T10:10:46,237 copying build/lib/damona/library/R/Singularity.R_3.6.3 -> build/bdist.linux-armv7l/wheel/damona/library/R 2023-04-14T10:10:46,243 copying build/lib/damona/library/R/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/R 2023-04-14T10:10:46,247 copying build/lib/damona/library/R/Singularity.R_4.0.2 -> build/bdist.linux-armv7l/wheel/damona/library/R 2023-04-14T10:10:46,251 copying build/lib/damona/library/__init__.py -> build/bdist.linux-armv7l/wheel/damona/library 2023-04-14T10:10:46,256 creating build/bdist.linux-armv7l/wheel/damona/library/conda 2023-04-14T10:10:46,259 copying build/lib/damona/library/conda/Singularity.conda_4.7.12 -> build/bdist.linux-armv7l/wheel/damona/library/conda 2023-04-14T10:10:46,265 copying build/lib/damona/library/conda/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/conda 2023-04-14T10:10:46,270 copying build/lib/damona/library/conda/Singularity.conda_4.9.2 -> build/bdist.linux-armv7l/wheel/damona/library/conda 2023-04-14T10:10:46,275 copying build/lib/damona/__init__.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:46,279 copying build/lib/damona/zenodo.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:46,284 copying build/lib/damona/script.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:46,293 creating build/bdist.linux-armv7l/wheel/damona/software 2023-04-14T10:10:46,296 creating build/bdist.linux-armv7l/wheel/damona/software/shustring 2023-04-14T10:10:46,299 copying build/lib/damona/software/shustring/Singularity.shustring_2.6.0 -> build/bdist.linux-armv7l/wheel/damona/software/shustring 2023-04-14T10:10:46,303 copying build/lib/damona/software/shustring/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/shustring 2023-04-14T10:10:46,308 creating build/bdist.linux-armv7l/wheel/damona/software/gffread 2023-04-14T10:10:46,311 copying build/lib/damona/software/gffread/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/gffread 2023-04-14T10:10:46,315 copying build/lib/damona/software/gffread/Singularity.gffread_0.12.1 -> build/bdist.linux-armv7l/wheel/damona/software/gffread 2023-04-14T10:10:46,320 creating build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2023-04-14T10:10:46,323 copying build/lib/damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2023-04-14T10:10:46,327 copying build/lib/damona/software/rnadiff/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2023-04-14T10:10:46,332 creating build/bdist.linux-armv7l/wheel/damona/software/seqkit 2023-04-14T10:10:46,335 copying build/lib/damona/software/seqkit/Singularity.seqkit_2.4.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqkit 2023-04-14T10:10:46,339 copying build/lib/damona/software/seqkit/Singularity.seqkit_2.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqkit 2023-04-14T10:10:46,344 copying build/lib/damona/software/seqkit/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/seqkit 2023-04-14T10:10:46,349 creating build/bdist.linux-armv7l/wheel/damona/software/picard 2023-04-14T10:10:46,351 copying build/lib/damona/software/picard/Singularity.picard_2.26 -> build/bdist.linux-armv7l/wheel/damona/software/picard 2023-04-14T10:10:46,357 creating build/bdist.linux-armv7l/wheel/damona/software/fastp 2023-04-14T10:10:46,359 copying build/lib/damona/software/fastp/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/fastp 2023-04-14T10:10:46,364 copying build/lib/damona/software/fastp/Singularity.fastp_0.23.2 -> build/bdist.linux-armv7l/wheel/damona/software/fastp 2023-04-14T10:10:46,369 creating build/bdist.linux-armv7l/wheel/damona/software/prokka 2023-04-14T10:10:46,371 copying build/lib/damona/software/prokka/Singularity.prokka_1.14.5 -> build/bdist.linux-armv7l/wheel/damona/software/prokka 2023-04-14T10:10:46,376 copying build/lib/damona/software/prokka/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/prokka 2023-04-14T10:10:46,381 creating build/bdist.linux-armv7l/wheel/damona/software/pbbam 2023-04-14T10:10:46,383 copying build/lib/damona/software/pbbam/Singularity.pbbam_2.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/pbbam 2023-04-14T10:10:46,388 copying build/lib/damona/software/pbbam/Singularity.pbbam_2.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/pbbam 2023-04-14T10:10:46,392 copying build/lib/damona/software/pbbam/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/pbbam 2023-04-14T10:10:46,397 creating build/bdist.linux-armv7l/wheel/damona/software/bowtie 2023-04-14T10:10:46,400 copying build/lib/damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie 2023-04-14T10:10:46,405 copying build/lib/damona/software/bowtie/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie 2023-04-14T10:10:46,410 creating build/bdist.linux-armv7l/wheel/damona/software/bedtools 2023-04-14T10:10:46,412 copying build/lib/damona/software/bedtools/Singularity.bedtools_2.30.0 -> build/bdist.linux-armv7l/wheel/damona/software/bedtools 2023-04-14T10:10:46,417 copying build/lib/damona/software/bedtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bedtools 2023-04-14T10:10:46,422 creating build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2023-04-14T10:10:46,425 copying build/lib/damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2023-04-14T10:10:46,429 copying build/lib/damona/software/rnaseqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2023-04-14T10:10:46,435 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,437 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,442 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,446 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.2 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,451 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,455 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.3 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,459 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.6 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,463 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,468 copying build/lib/damona/software/sequana_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,473 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.1 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,477 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.14.5 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2023-04-14T10:10:46,482 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2023-04-14T10:10:46,485 copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2023-04-14T10:10:46,489 copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2023-04-14T10:10:46,493 copying build/lib/damona/software/sequana_perl_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2023-04-14T10:10:46,498 copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2023-04-14T10:10:46,504 creating build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,506 copying build/lib/damona/software/bioconvert/Singularity.bioconvert_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,511 copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.3 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,515 copying build/lib/damona/software/bioconvert/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,519 copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.1 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,524 copying build/lib/damona/software/bioconvert/Singularity.bioconvert_0.6.2 -> build/bdist.linux-armv7l/wheel/damona/software/bioconvert 2023-04-14T10:10:46,529 creating build/bdist.linux-armv7l/wheel/damona/software/trf 2023-04-14T10:10:46,531 copying build/lib/damona/software/trf/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/trf 2023-04-14T10:10:46,536 copying build/lib/damona/software/trf/Singularity.trf_4.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/trf 2023-04-14T10:10:46,541 creating build/bdist.linux-armv7l/wheel/damona/software/flye 2023-04-14T10:10:46,543 copying build/lib/damona/software/flye/Singularity.flye_2.9.1 -> build/bdist.linux-armv7l/wheel/damona/software/flye 2023-04-14T10:10:46,548 copying build/lib/damona/software/flye/Singularity.flye_2.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/flye 2023-04-14T10:10:46,552 copying build/lib/damona/software/flye/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/flye 2023-04-14T10:10:46,556 creating build/bdist.linux-armv7l/wheel/damona/software/busco 2023-04-14T10:10:46,558 copying build/lib/damona/software/busco/Singularity.busco_5.4.6 -> build/bdist.linux-armv7l/wheel/damona/software/busco 2023-04-14T10:10:46,562 copying build/lib/damona/software/busco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/busco 2023-04-14T10:10:46,566 creating build/bdist.linux-armv7l/wheel/damona/software/samtools 2023-04-14T10:10:46,568 copying build/lib/damona/software/samtools/Singularity.samtools_1.15.0 -> build/bdist.linux-armv7l/wheel/damona/software/samtools 2023-04-14T10:10:46,572 copying build/lib/damona/software/samtools/Singularity.samtools_1.16.1 -> build/bdist.linux-armv7l/wheel/damona/software/samtools 2023-04-14T10:10:46,575 copying build/lib/damona/software/samtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/samtools 2023-04-14T10:10:46,579 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo 2023-04-14T10:10:46,581 copying build/lib/damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo 2023-04-14T10:10:46,585 copying build/lib/damona/software/sequana_denovo/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_denovo 2023-04-14T10:10:46,590 creating build/bdist.linux-armv7l/wheel/damona/software/circlator 2023-04-14T10:10:46,592 copying build/lib/damona/software/circlator/Singularity.circlator_1.5.5 -> build/bdist.linux-armv7l/wheel/damona/software/circlator 2023-04-14T10:10:46,595 copying build/lib/damona/software/circlator/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/circlator 2023-04-14T10:10:46,600 creating build/bdist.linux-armv7l/wheel/damona/software/pycoqc 2023-04-14T10:10:46,602 copying build/lib/damona/software/pycoqc/Singularity.pycoqc_2.5.2 -> build/bdist.linux-armv7l/wheel/damona/software/pycoqc 2023-04-14T10:10:46,606 copying build/lib/damona/software/pycoqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/pycoqc 2023-04-14T10:10:46,610 creating build/bdist.linux-armv7l/wheel/damona/software/sequana 2023-04-14T10:10:46,612 copying build/lib/damona/software/sequana/Singularity.sequana_0.14.6 -> build/bdist.linux-armv7l/wheel/damona/software/sequana 2023-04-14T10:10:46,617 copying build/lib/damona/software/sequana/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana 2023-04-14T10:10:46,621 copying build/lib/damona/software/sequana/Singularity.sequana_0.12.6 -> build/bdist.linux-armv7l/wheel/damona/software/sequana 2023-04-14T10:10:46,625 creating build/bdist.linux-armv7l/wheel/damona/software/rtools 2023-04-14T10:10:46,627 copying build/lib/damona/software/rtools/Singularity.rtools_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2023-04-14T10:10:46,631 copying build/lib/damona/software/rtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2023-04-14T10:10:46,634 copying build/lib/damona/software/rtools/Singularity.rtools_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2023-04-14T10:10:46,638 copying build/lib/damona/software/rtools/Singularity.rtools_1.2.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2023-04-14T10:10:46,643 creating build/bdist.linux-armv7l/wheel/damona/software/gzip 2023-04-14T10:10:46,644 copying build/lib/damona/software/gzip/Singularity.gzip_1.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/gzip 2023-04-14T10:10:46,648 copying build/lib/damona/software/gzip/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/gzip 2023-04-14T10:10:46,652 creating build/bdist.linux-armv7l/wheel/damona/software/seqtk 2023-04-14T10:10:46,654 copying build/lib/damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqtk 2023-04-14T10:10:46,658 copying build/lib/damona/software/seqtk/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/seqtk 2023-04-14T10:10:46,663 creating build/bdist.linux-armv7l/wheel/damona/software/samtools_minimap2 2023-04-14T10:10:46,664 copying build/lib/damona/software/samtools_minimap2/Singularity.samtools_1.17_minimap2_2.24.0 -> build/bdist.linux-armv7l/wheel/damona/software/samtools_minimap2 2023-04-14T10:10:46,668 copying build/lib/damona/software/samtools_minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/samtools_minimap2 2023-04-14T10:10:46,673 creating build/bdist.linux-armv7l/wheel/damona/software/ccs 2023-04-14T10:10:46,675 copying build/lib/damona/software/ccs/Singularity.ccs_6.4.0 -> build/bdist.linux-armv7l/wheel/damona/software/ccs 2023-04-14T10:10:46,679 copying build/lib/damona/software/ccs/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/ccs 2023-04-14T10:10:46,683 creating build/bdist.linux-armv7l/wheel/damona/software/idr 2023-04-14T10:10:46,685 copying build/lib/damona/software/idr/Singularity.idr_2.0.3 -> build/bdist.linux-armv7l/wheel/damona/software/idr 2023-04-14T10:10:46,689 copying build/lib/damona/software/idr/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/idr 2023-04-14T10:10:46,693 creating build/bdist.linux-armv7l/wheel/damona/software/hisat2 2023-04-14T10:10:46,695 copying build/lib/damona/software/hisat2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/hisat2 2023-04-14T10:10:46,700 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder 2023-04-14T10:10:46,702 copying build/lib/damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder 2023-04-14T10:10:46,706 copying build/lib/damona/software/sequana_ribofinder/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_ribofinder 2023-04-14T10:10:46,710 creating build/bdist.linux-armv7l/wheel/damona/software/bamtools 2023-04-14T10:10:46,712 copying build/lib/damona/software/bamtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bamtools 2023-04-14T10:10:46,716 copying build/lib/damona/software/bamtools/Singularity.bamtools_2.5.2 -> build/bdist.linux-armv7l/wheel/damona/software/bamtools 2023-04-14T10:10:46,720 creating build/bdist.linux-armv7l/wheel/damona/software/kraken 2023-04-14T10:10:46,722 copying build/lib/damona/software/kraken/Singularity.kraken_2.0.9 -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2023-04-14T10:10:46,726 copying build/lib/damona/software/kraken/Singularity.kraken_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2023-04-14T10:10:46,729 copying build/lib/damona/software/kraken/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2023-04-14T10:10:46,734 creating build/bdist.linux-armv7l/wheel/damona/software/snpeff 2023-04-14T10:10:46,736 copying build/lib/damona/software/snpeff/Singularity.snpeff_5.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/snpeff 2023-04-14T10:10:46,741 creating build/bdist.linux-armv7l/wheel/damona/software/minimap2 2023-04-14T10:10:46,742 copying build/lib/damona/software/minimap2/Singularity.minimap2_2.24.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2023-04-14T10:10:46,746 copying build/lib/damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2023-04-14T10:10:46,750 copying build/lib/damona/software/minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2023-04-14T10:10:46,753 copying build/lib/damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2023-04-14T10:10:46,758 creating build/bdist.linux-armv7l/wheel/damona/software/homer 2023-04-14T10:10:46,759 copying build/lib/damona/software/homer/Singularity.homer_4.11.0 -> build/bdist.linux-armv7l/wheel/damona/software/homer 2023-04-14T10:10:46,763 copying build/lib/damona/software/homer/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/homer 2023-04-14T10:10:46,768 creating build/bdist.linux-armv7l/wheel/damona/software/art 2023-04-14T10:10:46,770 copying build/lib/damona/software/art/Singularity.art_2.5.8 -> build/bdist.linux-armv7l/wheel/damona/software/art 2023-04-14T10:10:46,774 copying build/lib/damona/software/art/Singularity.art_3.11.14 -> build/bdist.linux-armv7l/wheel/damona/software/art 2023-04-14T10:10:46,777 copying build/lib/damona/software/art/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/art 2023-04-14T10:10:46,782 creating build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2023-04-14T10:10:46,784 copying build/lib/damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2023-04-14T10:10:46,787 copying build/lib/damona/software/bcl2fastq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2023-04-14T10:10:46,792 creating build/bdist.linux-armv7l/wheel/damona/software/graphviz 2023-04-14T10:10:46,793 copying build/lib/damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/bdist.linux-armv7l/wheel/damona/software/graphviz 2023-04-14T10:10:46,797 copying build/lib/damona/software/graphviz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/graphviz 2023-04-14T10:10:46,802 creating build/bdist.linux-armv7l/wheel/damona/software/polypolish 2023-04-14T10:10:46,803 copying build/lib/damona/software/polypolish/Singularity.polypolish_0.5.0 -> build/bdist.linux-armv7l/wheel/damona/software/polypolish 2023-04-14T10:10:46,807 copying build/lib/damona/software/polypolish/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/polypolish 2023-04-14T10:10:46,811 creating build/bdist.linux-armv7l/wheel/damona/software/ucsc 2023-04-14T10:10:46,813 copying build/lib/damona/software/ucsc/Singularity.ucsc_3.7.7 -> build/bdist.linux-armv7l/wheel/damona/software/ucsc 2023-04-14T10:10:46,817 copying build/lib/damona/software/ucsc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/ucsc 2023-04-14T10:10:46,821 creating build/bdist.linux-armv7l/wheel/damona/software/mergegi 2023-04-14T10:10:46,823 copying build/lib/damona/software/mergegi/Singularity.mergegi_0.0.1 -> build/bdist.linux-armv7l/wheel/damona/software/mergegi 2023-04-14T10:10:46,827 copying build/lib/damona/software/mergegi/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/mergegi 2023-04-14T10:10:46,831 creating build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2023-04-14T10:10:46,833 copying build/lib/damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2023-04-14T10:10:46,837 copying build/lib/damona/software/phantompeakqualtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2023-04-14T10:10:46,843 creating build/bdist.linux-armv7l/wheel/damona/software/igvtools 2023-04-14T10:10:46,845 copying build/lib/damona/software/igvtools/Singularity.igvtools_2.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/igvtools 2023-04-14T10:10:46,849 copying build/lib/damona/software/igvtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/igvtools 2023-04-14T10:10:46,852 copying build/lib/damona/software/__init__.py -> build/bdist.linux-armv7l/wheel/damona/software 2023-04-14T10:10:46,856 creating build/bdist.linux-armv7l/wheel/damona/software/falco 2023-04-14T10:10:46,858 copying build/lib/damona/software/falco/Singularity.falco_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/falco 2023-04-14T10:10:46,862 copying build/lib/damona/software/falco/Singularity.falco_0.2.1 -> build/bdist.linux-armv7l/wheel/damona/software/falco 2023-04-14T10:10:46,865 copying build/lib/damona/software/falco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/falco 2023-04-14T10:10:46,870 creating build/bdist.linux-armv7l/wheel/damona/software/fastqc 2023-04-14T10:10:46,871 copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2023-04-14T10:10:46,875 copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2023-04-14T10:10:46,879 copying build/lib/damona/software/fastqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2023-04-14T10:10:46,882 copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.9_py3 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2023-04-14T10:10:46,887 creating build/bdist.linux-armv7l/wheel/damona/software/canu 2023-04-14T10:10:46,889 copying build/lib/damona/software/canu/Singularity.canu_2.1.1 -> build/bdist.linux-armv7l/wheel/damona/software/canu 2023-04-14T10:10:46,893 copying build/lib/damona/software/canu/Singularity.canu_1.6.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu 2023-04-14T10:10:46,896 copying build/lib/damona/software/canu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/canu 2023-04-14T10:10:46,900 copying build/lib/damona/software/canu/Singularity.canu_1.8.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu 2023-04-14T10:10:46,904 creating build/bdist.linux-armv7l/wheel/damona/software/bwa 2023-04-14T10:10:46,906 copying build/lib/damona/software/bwa/Singularity.bwa_0.7.17 -> build/bdist.linux-armv7l/wheel/damona/software/bwa 2023-04-14T10:10:46,910 copying build/lib/damona/software/bwa/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bwa 2023-04-14T10:10:46,914 creating build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2023-04-14T10:10:46,916 copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2023-04-14T10:10:46,920 copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2023-04-14T10:10:46,923 copying build/lib/damona/software/bowtie2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2023-04-14T10:10:46,929 creating build/bdist.linux-armv7l/wheel/damona/software/salmon 2023-04-14T10:10:46,930 copying build/lib/damona/software/salmon/Singularity.salmon_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/salmon 2023-04-14T10:10:46,934 copying build/lib/damona/software/salmon/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/salmon 2023-04-14T10:10:46,939 creating build/bdist.linux-armv7l/wheel/damona/software/hifiasm 2023-04-14T10:10:46,940 copying build/lib/damona/software/hifiasm/Singularity.hifiasm_0.19.1 -> build/bdist.linux-armv7l/wheel/damona/software/hifiasm 2023-04-14T10:10:46,944 copying build/lib/damona/software/hifiasm/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/hifiasm 2023-04-14T10:10:46,949 creating build/bdist.linux-armv7l/wheel/damona/software/pigz 2023-04-14T10:10:46,951 copying build/lib/damona/software/pigz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/pigz 2023-04-14T10:10:46,954 copying build/lib/damona/software/pigz/Singularity.pigz_2.4.0 -> build/bdist.linux-armv7l/wheel/damona/software/pigz 2023-04-14T10:10:46,959 creating build/bdist.linux-armv7l/wheel/damona/software/quast 2023-04-14T10:10:46,961 copying build/lib/damona/software/quast/Singularity.quast_5.0.2 -> build/bdist.linux-armv7l/wheel/damona/software/quast 2023-04-14T10:10:46,964 copying build/lib/damona/software/quast/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/quast 2023-04-14T10:10:46,969 creating build/bdist.linux-armv7l/wheel/damona/software/bbtools 2023-04-14T10:10:46,971 copying build/lib/damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/bdist.linux-armv7l/wheel/damona/software/bbtools 2023-04-14T10:10:46,974 copying build/lib/damona/software/bbtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bbtools 2023-04-14T10:10:46,979 creating build/bdist.linux-armv7l/wheel/damona/software/RIPseeker 2023-04-14T10:10:46,981 copying build/lib/damona/software/RIPseeker/Singularity.RIPseeker_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/RIPseeker 2023-04-14T10:10:46,984 copying build/lib/damona/software/RIPseeker/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/RIPseeker 2023-04-14T10:10:46,988 copying build/lib/damona/builders.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:46,992 copying build/lib/damona/admin.py -> build/bdist.linux-armv7l/wheel/damona 2023-04-14T10:10:46,996 running install_egg_info 2023-04-14T10:10:47,183 running egg_info 2023-04-14T10:10:47,274 writing damona.egg-info/PKG-INFO 2023-04-14T10:10:47,280 writing dependency_links to damona.egg-info/dependency_links.txt 2023-04-14T10:10:47,283 writing entry points to damona.egg-info/entry_points.txt 2023-04-14T10:10:47,286 writing requirements to damona.egg-info/requires.txt 2023-04-14T10:10:47,289 writing top-level names to damona.egg-info/top_level.txt 2023-04-14T10:10:47,475 reading manifest file 'damona.egg-info/SOURCES.txt' 2023-04-14T10:10:47,495 reading manifest template 'MANIFEST.in' 2023-04-14T10:10:47,499 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-04-14T10:10:47,502 warning: no previously-included files matching '*pyc' found under directory '*' 2023-04-14T10:10:47,505 warning: no previously-included files matching 'test' found under directory '*' 2023-04-14T10:10:47,508 warning: no files found matching '.requirements_dev.txt' 2023-04-14T10:10:47,512 no previously-included directories found matching 'test' 2023-04-14T10:10:47,514 no previously-included directories found matching 'doc' 2023-04-14T10:10:47,514 adding license file 'LICENSE' 2023-04-14T10:10:47,542 writing manifest file 'damona.egg-info/SOURCES.txt' 2023-04-14T10:10:47,546 Copying damona.egg-info to build/bdist.linux-armv7l/wheel/damona-0.8.3-py3.7.egg-info 2023-04-14T10:10:47,574 running install_scripts 2023-04-14T10:10:47,636 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-04-14T10:10:47,645 creating build/bdist.linux-armv7l/wheel/damona-0.8.3.dist-info/WHEEL 2023-04-14T10:10:47,650 creating '/tmp/pip-wheel-6td_2fv0/damona-0.8.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-14T10:10:47,655 adding 'damona/__init__.py' 2023-04-14T10:10:47,659 adding 'damona/admin.py' 2023-04-14T10:10:47,662 adding 'damona/builders.py' 2023-04-14T10:10:47,667 adding 'damona/common.py' 2023-04-14T10:10:47,671 adding 'damona/config.py' 2023-04-14T10:10:47,677 adding 'damona/environ.py' 2023-04-14T10:10:47,684 adding 'damona/install.py' 2023-04-14T10:10:47,690 adding 'damona/registry.py' 2023-04-14T10:10:47,699 adding 'damona/script.py' 2023-04-14T10:10:47,704 adding 'damona/zenodo.py' 2023-04-14T10:10:47,707 adding 'damona/biocontainers/__init__.py' 2023-04-14T10:10:48,310 adding 'damona/biocontainers/registry.yaml' 2023-04-14T10:10:48,390 adding 'damona/library/__init__.py' 2023-04-14T10:10:48,394 adding 'damona/library/R/Singularity.R_3.6.3' 2023-04-14T10:10:48,396 adding 'damona/library/R/Singularity.R_4.0.2' 2023-04-14T10:10:48,399 adding 'damona/library/R/registry.yaml' 2023-04-14T10:10:48,403 adding 'damona/library/conda/Singularity.conda_4.7.12' 2023-04-14T10:10:48,406 adding 'damona/library/conda/Singularity.conda_4.9.2' 2023-04-14T10:10:48,408 adding 'damona/library/conda/registry.yaml' 2023-04-14T10:10:48,412 adding 'damona/library/rust/Singularity.rust' 2023-04-14T10:10:48,416 adding 'damona/library/ubuntu/Singularity.ubuntu_16.04' 2023-04-14T10:10:48,419 adding 'damona/library/ubuntu/Singularity.ubuntu_18.04' 2023-04-14T10:10:48,421 adding 'damona/library/ubuntu/registry.yaml' 2023-04-14T10:10:48,425 adding 'damona/papers/__init__.py' 2023-04-14T10:10:48,428 adding 'damona/shell/__init__.py' 2023-04-14T10:10:48,431 adding 'damona/shell/bash/__init__.py' 2023-04-14T10:10:48,435 adding 'damona/shell/bash/damona.sh' 2023-04-14T10:10:48,439 adding 'damona/shell/fish/damona.fish' 2023-04-14T10:10:48,444 adding 'damona/software/__init__.py' 2023-04-14T10:10:48,448 adding 'damona/software/RIPseeker/Singularity.RIPseeker_1.0.0' 2023-04-14T10:10:48,451 adding 'damona/software/RIPseeker/registry.yaml' 2023-04-14T10:10:48,454 adding 'damona/software/art/Singularity.art_2.5.8' 2023-04-14T10:10:48,457 adding 'damona/software/art/Singularity.art_3.11.14' 2023-04-14T10:10:48,459 adding 'damona/software/art/registry.yaml' 2023-04-14T10:10:48,463 adding 'damona/software/bamtools/Singularity.bamtools_2.5.2' 2023-04-14T10:10:48,466 adding 'damona/software/bamtools/registry.yaml' 2023-04-14T10:10:48,469 adding 'damona/software/bbtools/Singularity.bbtools_38.94.0' 2023-04-14T10:10:48,472 adding 'damona/software/bbtools/registry.yaml' 2023-04-14T10:10:48,476 adding 'damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0' 2023-04-14T10:10:48,479 adding 'damona/software/bcl2fastq/registry.yaml' 2023-04-14T10:10:48,482 adding 'damona/software/bedtools/Singularity.bedtools_2.30.0' 2023-04-14T10:10:48,485 adding 'damona/software/bedtools/registry.yaml' 2023-04-14T10:10:48,489 adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.1' 2023-04-14T10:10:48,491 adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.2' 2023-04-14T10:10:48,494 adding 'damona/software/bioconvert/Singularity.bioconvert_0.6.3' 2023-04-14T10:10:48,497 adding 'damona/software/bioconvert/Singularity.bioconvert_1.0.0' 2023-04-14T10:10:48,499 adding 'damona/software/bioconvert/registry.yaml' 2023-04-14T10:10:48,503 adding 'damona/software/bowtie/Singularity.bowtie_1.3.1' 2023-04-14T10:10:48,506 adding 'damona/software/bowtie/registry.yaml' 2023-04-14T10:10:48,509 adding 'damona/software/bowtie2/Singularity.bowtie2_2.3.4' 2023-04-14T10:10:48,512 adding 'damona/software/bowtie2/Singularity.bowtie2_2.4.2' 2023-04-14T10:10:48,514 adding 'damona/software/bowtie2/registry.yaml' 2023-04-14T10:10:48,518 adding 'damona/software/busco/Singularity.busco_5.4.6' 2023-04-14T10:10:48,521 adding 'damona/software/busco/registry.yaml' 2023-04-14T10:10:48,525 adding 'damona/software/bwa/Singularity.bwa_0.7.17' 2023-04-14T10:10:48,527 adding 'damona/software/bwa/registry.yaml' 2023-04-14T10:10:48,531 adding 'damona/software/canu/Singularity.canu_1.6.0' 2023-04-14T10:10:48,533 adding 'damona/software/canu/Singularity.canu_1.8.0' 2023-04-14T10:10:48,536 adding 'damona/software/canu/Singularity.canu_2.1.1' 2023-04-14T10:10:48,538 adding 'damona/software/canu/registry.yaml' 2023-04-14T10:10:48,542 adding 'damona/software/ccs/Singularity.ccs_6.4.0' 2023-04-14T10:10:48,544 adding 'damona/software/ccs/registry.yaml' 2023-04-14T10:10:48,549 adding 'damona/software/circlator/Singularity.circlator_1.5.5' 2023-04-14T10:10:48,551 adding 'damona/software/circlator/registry.yaml' 2023-04-14T10:10:48,555 adding 'damona/software/falco/Singularity.falco_0.2.1' 2023-04-14T10:10:48,558 adding 'damona/software/falco/Singularity.falco_1.0.0' 2023-04-14T10:10:48,560 adding 'damona/software/falco/registry.yaml' 2023-04-14T10:10:48,564 adding 'damona/software/fastp/Singularity.fastp_0.23.2' 2023-04-14T10:10:48,567 adding 'damona/software/fastp/registry.yaml' 2023-04-14T10:10:48,570 adding 'damona/software/fastqc/Singularity.fastqc_0.11.8' 2023-04-14T10:10:48,573 adding 'damona/software/fastqc/Singularity.fastqc_0.11.9' 2023-04-14T10:10:48,575 adding 'damona/software/fastqc/Singularity.fastqc_0.11.9_py3' 2023-04-14T10:10:48,578 adding 'damona/software/fastqc/registry.yaml' 2023-04-14T10:10:48,582 adding 'damona/software/flye/Singularity.flye_2.9.0' 2023-04-14T10:10:48,584 adding 'damona/software/flye/Singularity.flye_2.9.1' 2023-04-14T10:10:48,587 adding 'damona/software/flye/registry.yaml' 2023-04-14T10:10:48,590 adding 'damona/software/gffread/Singularity.gffread_0.12.1' 2023-04-14T10:10:48,593 adding 'damona/software/gffread/registry.yaml' 2023-04-14T10:10:48,596 adding 'damona/software/graphviz/Singularity.graphviz_2.43.0' 2023-04-14T10:10:48,599 adding 'damona/software/graphviz/registry.yaml' 2023-04-14T10:10:48,603 adding 'damona/software/gzip/Singularity.gzip_1.9.0' 2023-04-14T10:10:48,605 adding 'damona/software/gzip/registry.yaml' 2023-04-14T10:10:48,609 adding 'damona/software/hifiasm/Singularity.hifiasm_0.19.1' 2023-04-14T10:10:48,611 adding 'damona/software/hifiasm/registry.yaml' 2023-04-14T10:10:48,614 adding 'damona/software/hisat2/registry.yaml' 2023-04-14T10:10:48,618 adding 'damona/software/homer/Singularity.homer_4.11.0' 2023-04-14T10:10:48,621 adding 'damona/software/homer/registry.yaml' 2023-04-14T10:10:48,624 adding 'damona/software/idr/Singularity.idr_2.0.3' 2023-04-14T10:10:48,627 adding 'damona/software/idr/registry.yaml' 2023-04-14T10:10:48,631 adding 'damona/software/igvtools/Singularity.igvtools_2.12.0' 2023-04-14T10:10:48,633 adding 'damona/software/igvtools/registry.yaml' 2023-04-14T10:10:48,637 adding 'damona/software/kraken/Singularity.kraken_1.1.0' 2023-04-14T10:10:48,640 adding 'damona/software/kraken/Singularity.kraken_2.0.9' 2023-04-14T10:10:48,642 adding 'damona/software/kraken/registry.yaml' 2023-04-14T10:10:48,646 adding 'damona/software/mergegi/Singularity.mergegi_0.0.1' 2023-04-14T10:10:48,648 adding 'damona/software/mergegi/registry.yaml' 2023-04-14T10:10:48,652 adding 'damona/software/minimap2/Singularity.minimap2_2.17.0' 2023-04-14T10:10:48,654 adding 'damona/software/minimap2/Singularity.minimap2_2.23.0' 2023-04-14T10:10:48,657 adding 'damona/software/minimap2/Singularity.minimap2_2.24.0' 2023-04-14T10:10:48,659 adding 'damona/software/minimap2/registry.yaml' 2023-04-14T10:10:48,663 adding 'damona/software/pbbam/Singularity.pbbam_2.1.0' 2023-04-14T10:10:48,666 adding 'damona/software/pbbam/Singularity.pbbam_2.3.0' 2023-04-14T10:10:48,669 adding 'damona/software/pbbam/registry.yaml' 2023-04-14T10:10:48,673 adding 'damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2' 2023-04-14T10:10:48,675 adding 'damona/software/phantompeakqualtools/registry.yaml' 2023-04-14T10:10:48,679 adding 'damona/software/picard/Singularity.picard_2.26' 2023-04-14T10:10:48,683 adding 'damona/software/pigz/Singularity.pigz_2.4.0' 2023-04-14T10:10:48,685 adding 'damona/software/pigz/registry.yaml' 2023-04-14T10:10:48,689 adding 'damona/software/polypolish/Singularity.polypolish_0.5.0' 2023-04-14T10:10:48,691 adding 'damona/software/polypolish/registry.yaml' 2023-04-14T10:10:48,695 adding 'damona/software/prokka/Singularity.prokka_1.14.5' 2023-04-14T10:10:48,697 adding 'damona/software/prokka/registry.yaml' 2023-04-14T10:10:48,700 adding 'damona/software/pycoqc/Singularity.pycoqc_2.5.2' 2023-04-14T10:10:48,703 adding 'damona/software/pycoqc/registry.yaml' 2023-04-14T10:10:48,706 adding 'damona/software/quast/Singularity.quast_5.0.2' 2023-04-14T10:10:48,709 adding 'damona/software/quast/registry.yaml' 2023-04-14T10:10:48,713 adding 'damona/software/rnadiff/Singularity.rnadiff_1.7.1' 2023-04-14T10:10:48,715 adding 'damona/software/rnadiff/registry.yaml' 2023-04-14T10:10:48,719 adding 'damona/software/rnaseqc/Singularity.rnaseqc_2.35.0' 2023-04-14T10:10:48,721 adding 'damona/software/rnaseqc/registry.yaml' 2023-04-14T10:10:48,725 adding 'damona/software/rtools/Singularity.rtools_1.0.0' 2023-04-14T10:10:48,728 adding 'damona/software/rtools/Singularity.rtools_1.1.0' 2023-04-14T10:10:48,731 adding 'damona/software/rtools/Singularity.rtools_1.2.0' 2023-04-14T10:10:48,734 adding 'damona/software/rtools/registry.yaml' 2023-04-14T10:10:48,737 adding 'damona/software/salmon/Singularity.salmon_1.3.0' 2023-04-14T10:10:48,740 adding 'damona/software/salmon/registry.yaml' 2023-04-14T10:10:48,743 adding 'damona/software/samtools/Singularity.samtools_1.15.0' 2023-04-14T10:10:48,746 adding 'damona/software/samtools/Singularity.samtools_1.16.1' 2023-04-14T10:10:48,748 adding 'damona/software/samtools/registry.yaml' 2023-04-14T10:10:48,752 adding 'damona/software/samtools_minimap2/Singularity.samtools_1.17_minimap2_2.24.0' 2023-04-14T10:10:48,754 adding 'damona/software/samtools_minimap2/registry.yaml' 2023-04-14T10:10:48,758 adding 'damona/software/seqkit/Singularity.seqkit_2.1.0' 2023-04-14T10:10:48,760 adding 'damona/software/seqkit/Singularity.seqkit_2.4.0' 2023-04-14T10:10:48,763 adding 'damona/software/seqkit/registry.yaml' 2023-04-14T10:10:48,766 adding 'damona/software/seqtk/Singularity.seqtk_1.3.0' 2023-04-14T10:10:48,769 adding 'damona/software/seqtk/registry.yaml' 2023-04-14T10:10:48,773 adding 'damona/software/sequana/Singularity.sequana_0.12.6' 2023-04-14T10:10:48,775 adding 'damona/software/sequana/Singularity.sequana_0.14.6' 2023-04-14T10:10:48,778 adding 'damona/software/sequana/registry.yaml' 2023-04-14T10:10:48,782 adding 'damona/software/sequana_denovo/Singularity.sequana_denovo_0.0.2' 2023-04-14T10:10:48,784 adding 'damona/software/sequana_denovo/registry.yaml' 2023-04-14T10:10:48,788 adding 'damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0' 2023-04-14T10:10:48,791 adding 'damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0' 2023-04-14T10:10:48,794 adding 'damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.3.0' 2023-04-14T10:10:48,796 adding 'damona/software/sequana_perl_tools/registry.yaml' 2023-04-14T10:10:48,800 adding 'damona/software/sequana_ribofinder/Singularity.sequana_ribofinder_0.12.0' 2023-04-14T10:10:48,803 adding 'damona/software/sequana_ribofinder/registry.yaml' 2023-04-14T10:10:48,807 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.10.0' 2023-04-14T10:10:48,810 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.11.0' 2023-04-14T10:10:48,813 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.12.0' 2023-04-14T10:10:48,815 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.1' 2023-04-14T10:10:48,818 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.2' 2023-04-14T10:10:48,821 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.3' 2023-04-14T10:10:48,823 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.5' 2023-04-14T10:10:48,825 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.14.6' 2023-04-14T10:10:48,828 adding 'damona/software/sequana_tools/Singularity.sequana_tools_0.9.0' 2023-04-14T10:10:48,832 adding 'damona/software/sequana_tools/registry.yaml' 2023-04-14T10:10:48,835 adding 'damona/software/shustring/Singularity.shustring_2.6.0' 2023-04-14T10:10:48,838 adding 'damona/software/shustring/registry.yaml' 2023-04-14T10:10:48,842 adding 'damona/software/snpeff/Singularity.snpeff_5.1.0' 2023-04-14T10:10:48,845 adding 'damona/software/trf/Singularity.trf_4.10.0' 2023-04-14T10:10:48,848 adding 'damona/software/trf/registry.yaml' 2023-04-14T10:10:48,851 adding 'damona/software/ucsc/Singularity.ucsc_3.7.7' 2023-04-14T10:10:48,854 adding 'damona/software/ucsc/registry.yaml' 2023-04-14T10:10:48,859 adding 'damona-0.8.3.dist-info/LICENSE' 2023-04-14T10:10:48,865 adding 'damona-0.8.3.dist-info/METADATA' 2023-04-14T10:10:48,867 adding 'damona-0.8.3.dist-info/WHEEL' 2023-04-14T10:10:48,869 adding 'damona-0.8.3.dist-info/entry_points.txt' 2023-04-14T10:10:48,871 adding 'damona-0.8.3.dist-info/top_level.txt' 2023-04-14T10:10:48,876 adding 'damona-0.8.3.dist-info/RECORD' 2023-04-14T10:10:48,905 removing build/bdist.linux-armv7l/wheel 2023-04-14T10:10:49,198 Building wheel for damona (setup.py): finished with status 'done' 2023-04-14T10:10:49,221 Created wheel for damona: filename=damona-0.8.3-py3-none-any.whl size=524129 sha256=458347800886c1754d51140bd9b3445568dee3e2fe0cacb1655fadf63666acec 2023-04-14T10:10:49,223 Stored in directory: /tmp/pip-ephem-wheel-cache-vn1oo5dq/wheels/24/09/77/4e4de13a113456049e591dfea631e0bf3426967e8cf8958e8d 2023-04-14T10:10:49,267 Successfully built damona 2023-04-14T10:10:49,316 Removed build tracker: '/tmp/pip-build-tracker-k0_xalxg'